# terms

id: PBO:0087177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transport factor, conserved from yeast to humans; also has a role in transporting RNA polymerase III into the nucleus; interacts with most of the RNAP II subunits; nucleo-cytoplasmic shuttling protein; deletion causes hypersensitivity to K1 killer toxin; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087177"}


id: GO:0106037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region that lies just beneath the plasma membrane in the middle of the apical edge of a cell.","definition_xrefs":["PMID:28263180","PMID:23831726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical cortex","termid":"GO:0045179"},{"relation_name":"part_of","term_name":"apical cortex","termid":"GO:0045179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"apicomedial cortex","synonyms":[{"name":"medioapical cortex","type":"exact"}],"termid":"GO:0106037"}


id: PBO:0082439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; relative distribution to the nucleus increases upon DNA replication stress; CLB3 has a paralog, CLB4, that arose from the whole genome duplication","termid":"PBO:0082439"}


id: PBO:0045400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 2","termid":"PBO:0045400"}


id: PBO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin like kinase 3","termid":"PBO:0044632"}


id: FYPO:0003385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cadmium ions measured in a cell is higher than normal during a cellular response to cadmium ion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular cadmium level during cellular response to cadmium ion","synonyms":[{"name":"increased cadmium accumulation during cellular response to cadmium","type":"related"},{"name":"increased cellular cadmium accumulation during cellular response to cadmium","type":"related"},{"name":"increased cellular cadmium ion level during cellular response to cadmium","type":"exact"},{"name":"increased cellular cadmium level during cellular response to cadmium","type":"exact"},{"name":"increased cellular cadmium level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"increased cellular cadmium level during cellular response to cadmium during vegetative growth","type":"exact"}],"termid":"FYPO:0003385"}


id: MOD:00223
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-mureinyl-L-lysine.","definition_xrefs":["PubMed:4261992","RESID:AA0218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycanated residue","termid":"MOD:01159"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764","MOD:01875"],"is_obsolete":false,"name":"N6-mureinyl-L-lysine","synonyms":[{"name":"MOD_RES N6-murein peptidoglycan lysine","type":"exact"},{"name":"N6-[(2R,6S)-2-(N-(N-mureinyl-(R)-alanyl)-(S)-glutamyl)amino-6-amino-6-carboxy-1-oxohex-1-yl]lysine","type":"exact"},{"name":"N6-mureinyl-L-lysine","type":"exact"}],"termid":"MOD:00223"}


id: GO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"},{"relation_name":"positively_regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmacytoid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002612"}


id: PBO:0059030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 20","termid":"PBO:0059030"}


id: PBO:0068574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 25, pseudogene","termid":"PBO:0068574"}


id: GO:0070917
data:
  {"annotated_genes":["SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78027],"is_not":false,"summary":null,"term":"GO:0070917"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of inositol phosphoceramide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"inositol phosphoceramide synthase regulator activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IPC synthase regulator activity","type":"exact"}],"termid":"GO:0070917","terms_by_termid":{"GO:0070917":null}}


id: GO:0016591
data:
  {"annotated_genes":["SJAG_04274","SJAG_01610","SJAG_01765","SJAG_01313","SJAG_04420","SJAG_01207","SJAG_00901","SJAG_00421","SJAG_00758","SJAG_04030","SJAG_04894","SJAG_03285","SJAG_00159","SJAG_03118","SJAG_04933","SJAG_01710","SJAG_01151","SJAG_02101","SJAG_03900","SJAG_00741","SJAG_00584","SJAG_04917","SJAG_04977","SJAG_00095","SJAG_00512","SJAG_01713","SJAG_04614","SJAG_00119","SJAG_00872","SJAG_04852","SJAG_03618","SJAG_01436","SJAG_00735","SJAG_02174","SJAG_02541","SJAG_03107","SJAG_03206","SJAG_00150","SJAG_04261","SJAG_04654","SJAG_00458","SJAG_02458","SJAG_04559","SJAG_04368","SJAG_02506","SJAG_00995","SJAG_01808","SJAG_00139","SJAG_01475","SJAG_00116","SJAG_02070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68486,80420,74285,72848,78031],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[72418,80726,74489,112437,79871,72820,76951,75053,76246,77145,77305,78311,78734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[73804,80433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[78614,71651,117173,58090,76205,103143,95070,78485,73125,82123,75409,72395,69630,77343,76723,59940],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[77930,71911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[80985,82238,71652],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[77934,72120,91645,108547,80501,76148,71894,114426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[61406,67348,77990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A nuclear DNA-directed RNA polymerase complex containing an RNA polymerase II core enzyme as well as additional proteins and transcription factor complexes, that are capable of promoter recognition and transcription initiation from an RNA polymerase II promoter in vivo. These additional components may include general transcription factor complexes TFIIA, TFIID, TFIIE, TFIIF, or TFIIH, as well as Mediator, SWI/SNF, GCN5, or SRBs and confer the ability to recognize promoters.","definition_xrefs":["PMID:16858867","GOC:jl","Wikipedia:Rna_polymerase_ii","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01475":null,"SJAG_01610":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01808":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03618":null,"SJAG_03900":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04559":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II, holoenzyme","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, holoenzyme","type":"exact"}],"termid":"GO:0016591","terms_by_termid":{"GO:0005665":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0016593":null,"GO:0070985":null}}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: MONDO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Wilson type is characterized by severe intellectual deficit with mutism, epilepsy, growth retardation and recurrent infections. It has been described in three males from three generations of one family. The causative gene has been localized to the 11p region of the X chromosome.","definition_xrefs":["Orphanet:85290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 12","secondary_identifiers":["MESH:C564106","MEDGEN:333405","OMIM:309545","SCTID:719009006","UMLS:C1839792","GARD:16747","DOID:0060804"],"synonyms":[{"name":"MRXS12","type":"related"},{"name":"X-linked intellectual disability, Wilson type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 12","type":"exact"},{"name":"mental retardation, X-linked, syndromic 12","type":"exact"},{"name":"syndromic X-linked intellectual disability type 12","type":"exact"}],"termid":"MONDO:0010658","xrefs":{"Monarch":{"xref_id":"0010658"}}}


id: PBO:0075531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E11","termid":"PBO:0075531"}


id: GO:1902160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide-gated ion channel activity (obsolete GO:1902160)","synonyms":[{"name":"down regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide-gated ion channel activity","type":"narrow"},{"name":"negative regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"negative regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"negative regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902160"}


id: MONDO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short bowel syndrome (obsolete MONDO:0001077)","termid":"MONDO:0001077","xrefs":{"Monarch":{"xref_id":"0001077"}}}


id: PBO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: PBO:0081612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 540","termid":"PBO:0081612"}


id: GO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cupula development","termid":"GO:0048887"}


id: PBO:0109606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A13","termid":"PBO:0109606"}


id: PBO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 1","termid":"PBO:0072272"}


id: PATO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction from a lower to a higher point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up","termid":"PATO:0000370"}


id: GO:0035545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the nervous system with respect to the left and right halves.","definition_xrefs":["PMID:17717195","PMID:19641012","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"}


id: GO:1902680
data:
  {"annotated_genes":["SJAG_00802","SJAG_00342","SJAG_03879","SJAG_04611","SJAG_01243","SJAG_02956","SJAG_01193","SJAG_01403","SJAG_06638","SJAG_04009","SJAG_02391","SJAG_03346","SJAG_00766","SJAG_02252","SJAG_01771","SJAG_02474","SJAG_03067","SJAG_04191","SJAG_00156","SJAG_01952","SJAG_03590","SJAG_01805","SJAG_02057","SJAG_04855","SJAG_02773","SJAG_02592","SJAG_06576","SJAG_01307","SJAG_01199","SJAG_01532","SJAG_02810","SJAG_04712","SJAG_01878","SJAG_03519","SJAG_01916","SJAG_03061","SJAG_02254","SJAG_00987","SJAG_00297","SJAG_04092","SJAG_06599","SJAG_01149","SJAG_03484","SJAG_04388","SJAG_02730","SJAG_03897","SJAG_02709","SJAG_05153","SJAG_03967","SJAG_03573","SJAG_00613","SJAG_05203","SJAG_03421","SJAG_05343","SJAG_00210","SJAG_02048","SJAG_02415","SJAG_03241","SJAG_01764","SJAG_04820","SJAG_00904","SJAG_02494","SJAG_00792","SJAG_02389","SJAG_05341","SJAG_00266","SJAG_03143","SJAG_05313","SJAG_04749","SJAG_03289","SJAG_01583","SJAG_01441","SJAG_00164","SJAG_00698","SJAG_02326","SJAG_00822","SJAG_04206","SJAG_02723","SJAG_04249","SJAG_03622","SJAG_01694","SJAG_00641","SJAG_00269","SJAG_04036","SJAG_04551","SJAG_05288","SJAG_03183","SJAG_01938","SJAG_02196","SJAG_01740","SJAG_03118","SJAG_00150","SJAG_03126","SJAG_05187","SJAG_02406","SJAG_02608","SJAG_02255","SJAG_04705","SJAG_02849","SJAG_03981","SJAG_02472","SJAG_00693","SJAG_04813","SJAG_02698","SJAG_01113","SJAG_02311","SJAG_02671","SJAG_01062","SJAG_03538","SJAG_04099","SJAG_00909","SJAG_02218","SJAG_00163","SJAG_00973","SJAG_02938","SJAG_02138","SJAG_03735","SJAG_04839","SJAG_04755","SJAG_01213","SJAG_03501","SJAG_04421","SJAG_04647","SJAG_01150","SJAG_02551","SJAG_01778","SJAG_01151","SJAG_05247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72016,81600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[87410,92967,88926,106211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[81353,89173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[111548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[79814,81263,74937,78118,80324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[81442,95184,98803,111881,65000,70866,102696,117850,72019,109261,92226,69058,80381,80907,70133,81745,78155,106970,70341,111332,97028,101753,108612,75128,60669,93188,66463,75147,61954,116981,114430,101673,97029,79823,74653,81603,108023,74248,79221,115879,107131,100017,116071,95024,62959,98083,81372,72535,93854,107531,73283,97030,77400,64101,67610,73442,75561,63742,75639,103978,118727,116596,72098,77690,79179,96431,97031,108199,108374,97027,68620,94575,111462,72526,71126,100006,62863,118726,76812,77580,73637,76581,78525,97923,102224,96796,86860,99011,93286,74022,101800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[79975,116605,72847,73259,65714,81336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[108289,114331,118562,105240,105923,98181,65372,86897,98533,108316,105786,94876,90145,101481,95358,89831,102943,103202,93816,93931,105596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any 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id: GO:0006657
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id: GO:0072653
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id: PBO:0048841
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase","termid":"PBO:0048841"}


id: PBO:0077025
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id: GO:0018952
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id: PBO:0013806
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id: GO:0141195
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id: PR:000027720
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id: PBO:0055420
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id: MONDO:0008028
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Barnes type","secondary_identifiers":["MEDGEN:322468","OMIM:158800","UMLS:C1834688","MESH:C563558"],"synonyms":[{"name":"muscular dystrophy, Barnes type","type":"exact"}],"termid":"MONDO:0008028","xrefs":{"Monarch":{"xref_id":"0008028"}}}


id: GO:0042763
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id: GO:0170040
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id: GO:0060162
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id: PBO:0050629
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id: PBO:0089821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn7","termid":"PBO:0089821"}


id: PBO:0054564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1966","termid":"PBO:0054564"}


id: PBO:0014259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs22","termid":"PBO:0014259"}


id: PBO:0073696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 2","termid":"PBO:0073696"}


id: MONDO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary bone dysplasia disorder characterized by the association of dental anomalies (oligodontia with pointed incisors) and generalized platyspondyly with epiphyseal and metaphyseal involvement. Thin tapering fingers and accentuated palmar creases are additional features.","definition_xrefs":["Orphanet:168451"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia-abnormal dentition syndrome","secondary_identifiers":["GARD:17030","UMLS:C1866507","MESH:C566644","MEDGEN:356550","OMIM:601668"],"synonyms":[{"name":"SEMDAD","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with abnormal dentition","type":"related"}],"termid":"MONDO:0011124","xrefs":{"Monarch":{"xref_id":"0011124"}}}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: GO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-1483116","RHEA:12969","MetaCyc:GLYCPDIESTER-RXN","Reactome:R-HSA-1483107"],"synonyms":[{"name":"IgD-binding protein D","type":"related"},{"name":"gene hpd protein","type":"related"},{"name":"glycerophosphodiester glycerophosphohydrolase activity","type":"related"},{"name":"glycerophosphoryl diester phosphodiesterase activity","type":"related"}],"termid":"GO:0008889"}


id: GO:0021621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the hypoglossal nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve structural organization","synonyms":[{"name":"CN XII structural organization","type":"related"},{"name":"hypoglossal nerve structural organisation","type":"exact"}],"termid":"GO:0021621"}


id: GO:0070695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of AKTIP/FTS, FAM160A2/p107FHIP, and one or more members of the Hook family of proteins, HOOK1, HOOK2, and HOOK3. The complex is thought to promote vesicle trafficking and/or fusion, and associates with the homotypic vesicular sorting complex (the HOPS complex).","definition_xrefs":["GOC:mah","PMID:18799622","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FHF complex","termid":"GO:0070695"}


id: PBO:0116664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4D","termid":"PBO:0116664"}


id: PR:G2TRT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor C1348.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.12","synonyms":[{"name":"Spom972h-SPBC1348.12","type":"exact"}],"termid":"PR:G2TRT1"}


id: PBO:0043039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimerin 1","termid":"PBO:0043039"}


id: PBO:0013742
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_note","termid":"PBO:0013742"}


id: GO:1903247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","GOC:BHF","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903247)","synonyms":[{"name":"activation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"activation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"positive regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"positive regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"up-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"up-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"upregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"upregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"upregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903247"}


id: GO:1990822
data:
  {"annotated_genes":["SJAG_04715","SJAG_03256","SJAG_02716","SJAG_03400","SJAG_04725","SJAG_01636","SJAG_00877","SJAG_04983","SJAG_00051","SJAG_01923","SJAG_02029","SJAG_01336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96843,103551,103552,103553,103554],"is_not":false,"summary":null,"term":"GO:1990822"},{"annotations":[89859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[103359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[98331,64321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[109599,103363,102330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids from one side of a membrane to the other.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"basic amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990822","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1903826":null,"GO:1990822":null}}


id: PBO:0042036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 89","termid":"PBO:0042036"}


id: PBO:0063292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 6","termid":"PBO:0063292"}


id: MONDO:0958296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma with BCOR genetic alterations that is characterized by the presence of BCOR-CCNB3 fusion gene.","definition_xrefs":["DOID:0081404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma with BCOR genetic alterations","termid":"MONDO:0958159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"BCOR-CCNB3 sarcoma","secondary_identifiers":["MEDGEN:1791499","UMLS:C5555058"],"termid":"MONDO:0958296","xrefs":{"Monarch":{"xref_id":"0958296"}}}


id: GO:0061456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal stem cell from one site to another contributing to the shaping of the ureteric bud. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell migration involved in uteric bud morphogenesis","termid":"GO:0061456"}


id: PBO:0077062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 8","termid":"PBO:0077062"}


id: FYPO:0003670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mycophenolic acid. Cells stop growing (and may die) at a concentration of mycophenolic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to mycophenolic acid","synonyms":[{"name":"hypersensitive to mycophenolic acid","type":"exact"},{"name":"sensitive to MPA","type":"exact"},{"name":"sensitive to mycophenolic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to mycophenolic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003670"}


id: PBO:0017085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug112","termid":"PBO:0017085"}


id: GO:0033658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cell chloroplast thylakoid. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host chloroplast thylakoid","synonyms":[{"name":"disruption by symbiont of host chloroplast thylakoid","type":"exact"},{"name":"modification by symbiont of host chloroplast thylakoid","type":"related"}],"termid":"GO:0033658"}


id: FYPO:0008183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3-S10 phosphorylation is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-S10 phosphorylation during vegetative growth","termid":"FYPO:0008183"}


id: GO:0015506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + H+(out) = nucleoside(in) + H+(in).","definition_xrefs":["TC:2.A.41.1.1","TC:2.A.1.10.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nucleoside:proton symporter activity","secondary_identifiers":["GO:0015536"],"synonyms":[{"name":"nucleoside permease activity","type":"related"},{"name":"nucleoside:hydrogen ion symporter activity","type":"exact"},{"name":"nucleoside:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015506"}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: GO:0050043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate = (R)-lactate.","definition_xrefs":["EC:5.1.2.1","RHEA:10960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lactate racemase activity","secondary_identifiers":["KEGG_REACTION:R01450","MetaCyc:LACTATE-RACEMASE-RXN"],"synonyms":[{"name":"hydroxyacid racemase activity","type":"related"},{"name":"lactic acid racemase activity","type":"related"},{"name":"lacticoracemase activity","type":"related"}],"termid":"GO:0050043"}


id: PBO:0041265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein pseudogene 2","termid":"PBO:0041265"}


id: PBO:0088611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim10","termid":"PBO:0088611"}


id: GO:0021944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between a neuronal cell and a glial cell as a component of the process of hindbrain glial-mediated radial cell migration.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration","termid":"GO:0021944"}


id: PBO:0079280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase","termid":"PBO:0079280"}


id: PBO:0081384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 224","termid":"PBO:0081384"}


id: PBO:0058331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4705","termid":"PBO:0058331"}


id: GO:0046116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine metabolic process (obsolete GO:0046116)","synonyms":[{"name":"queuosine metabolism","type":"exact"}],"termid":"GO:0046116"}


id: SO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an integron, adjacent to an integrase, at which site specific recombination involving an attC_site takes place.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attI_site","synonyms":[{"name":"attI site","type":"exact"}],"termid":"SO:0000367"}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: PATO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000233 touch (obsolete PATO:0000233)","termid":"PATO:0000233"}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: MONDO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 8","secondary_identifiers":["DOID:0111299","MEDGEN:462541","OMIM:613828","GARD:18664","UMLS:C3151191"],"synonyms":[{"name":"GEFSP8","type":"exact"},{"name":"Gefs+, type 8","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 8","type":"exact"}],"termid":"MONDO:0013448","xrefs":{"Monarch":{"xref_id":"0013448"}}}


id: PBO:0066065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor associated protein of the synapse","termid":"PBO:0066065"}


id: MONDO:1011183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitamin D dependent rickets that occurs in dogs due to a mutation in the CYP27B1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D dependent rickets, CYP27B1-related, dog","secondary_identifiers":["OMIA:000837-9615"],"synonyms":[{"name":"vitamin D-deficiency rickets type IA, dog","type":"related"}],"termid":"MONDO:1011183","xrefs":{"Monarch":{"xref_id":"1011183"}}}


id: GO:0098971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neurotransmitter receptor complex along microtubules in nerve cell dendrites towards the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde dendritic transport of neurotransmitter receptor complex","termid":"GO:0098971"}


id: PBO:0060258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYD88 innate immune signal transduction adaptor","termid":"PBO:0060258"}


id: PATO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average.","definition_xrefs":["PATOC:UMH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigantic","synonyms":[{"name":"giant","type":"exact"}],"termid":"PATO:0001940"}


id: PBO:0072604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSL1D1 divergent transcript","termid":"PBO:0072604"}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_04738","SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77640,79846],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-379974","KEGG_REACTION:R03657","MetaCyc:LEUCINE--TRNA-LIGASE-RXN","EC:6.1.1.4","Reactome:R-HSA-380200"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: PBO:0089737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Nxt3","termid":"PBO:0089737"}


id: MONDO:0018811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital portosystemic shunt is a rare, congenital anomaly of the great veins characterized by an abnormal communication between one or more veins of the portal and the caval systems, resulting in complete or partial diversion of the portal blood away from the liver to the systemic circulation. Clinical manifestations include liver atrophy, hypergalactosemia without uridine diphosphate enzyme deficiency, hyperammonemia, encephalopathy (resulting in learning disabilities, extreme fatigability and seizures), pulmonary hypertension, hypoxemia from hepatopulmonary syndrome and benign or malignant tumors.","definition_xrefs":["Orphanet:480531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital portosystemic shunt","secondary_identifiers":["GARD:21979","icd11.foundation:682625970","MEDGEN:712860","UMLS:C1290495"],"synonyms":[{"name":"congenital portosystemic venous fistula","type":"exact"}],"termid":"MONDO:0018811","xrefs":{"Monarch":{"xref_id":"0018811"}}}


id: PBO:0066337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2","termid":"PBO:0066337"}


id: _global:causally_influenced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_entities","termid":"_global:causal_relation_between_entities"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","secondary_identifiers":["RO:0002559"],"termid":"_global:causally_influenced_by"}


id: GO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopiperitenone = piperitenone.","definition_xrefs":["RHEA:21516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isopiperitenone delta-isomerase activity","secondary_identifiers":["EC:5.3.3.11","MetaCyc:ISOPIPERITENONE-DELTA-ISOMERASE-RXN","KEGG_REACTION:R03782"],"synonyms":[{"name":"isopiperitenone D-isomerase activity","type":"exact"},{"name":"isopiperitenone delta8-delta4-isomerase activity","type":"related"}],"termid":"GO:0050008"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: PATO:0001664
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased solubility","synonyms":[{"name":"low solubility","type":"exact"}],"termid":"PATO:0001664"}


id: GO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanoate + coenzyme A = propionyl-CoA + formate.","definition_xrefs":["PMID:9484901","RHEA:28054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"2-ketobutyrate formate-lyase activity","secondary_identifiers":["MetaCyc:KETOBUTFORMLY-RXN"],"synonyms":[{"name":"KFL","type":"exact"},{"name":"TdcE","type":"related"},{"name":"keto-acid formate acetyltransferase","type":"broad"}],"termid":"GO:0043875"}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["EC:3.1.2.19","MetaCyc:3.1.2.19-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: GO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"metaxylem development","termid":"GO:0090058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaxylem development","termid":"GO:0090060"}


id: GO:0140579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which the metal ion is reduced.","definition_xrefs":["PMID:14499595"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, reducing metal ions (obsolete GO:0140579)","termid":"GO:0140579"}


id: PBO:0064186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA","termid":"PBO:0064186"}


id: PBO:0005376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit 8 (predicted)","termid":"PBO:0005376"}


id: GO:0042138
data:
  {"annotated_genes":["SJAG_05295","SJAG_00100","SJAG_01677","SJAG_05373","SJAG_05333","SJAG_02652","SJAG_02490","SJAG_01156","SJAG_03048","SJAG_04748","SJAG_00172","SJAG_03720","SJAG_00908","SJAG_04303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81159,81176,88628,90943,94240,106277],"is_not":false,"summary":null,"term":"GO:0042138"},{"annotations":[110708,108313,89801,104422,109217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010780"},{"annotations":[101905,107921],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905263"},{"annotations":[115836],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I. This results in the initiation of meiotic recombination.","definition_xrefs":["GOC:elh","PMID:11529427","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00908":null,"SJAG_01156":null,"SJAG_01677":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03048":null,"SJAG_03720":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0042138","terms_by_termid":{"GO:0010780":null,"GO:0042138":null,"GO:0062209":null,"GO:1905263":null}}


id: PBO:0082351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of ferric reductase (Fre1p); UTR1 has a paralog, YEF1, that arose from the whole genome duplication","termid":"PBO:0082351"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: MONDO:0011370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Stargardt disease in which the cause of the disease is a mutation in the PROM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Stargardt disease","termid":"MONDO:0019353"},{"relation_name":"is_a","term_name":"PROM1-related dominant retinopathy","termid":"MONDO:1040053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"Stargardt disease 4","secondary_identifiers":["GARD:15359","MESH:C535521","MEDGEN:355004","OMIM:603786","UMLS:C1863534"],"synonyms":[{"name":"PROM1 Stargardt disease","type":"exact"},{"name":"STGD4","type":"related"},{"name":"Stargardt disease 4","type":"exact"},{"name":"Stargardt disease caused by mutation in PROM1","type":"exact"},{"name":"Stargardt disease type 4","type":"exact"}],"termid":"MONDO:0011370","xrefs":{"Monarch":{"xref_id":"0011370"}}}


id: GO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The light reactions of photosynthesis, which take place in photosystems II and I. Light energy is harvested and used to power the transfer of electrons among a series of electron donors and acceptors. The final electron acceptor is NADP+, which is reduced to NADPH. NADPH generated from light reactions is used in sugar synthesis in dark reactions. Light reactions also generate a proton motive force across the thylakoid membrane, and the proton gradient is used to synthesize ATP. There are two chemical reactions involved in the light reactions: water oxidation in photosystem II, and NADP reduction in photosystem I.","definition_xrefs":["PMID:15746074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light reaction","secondary_identifiers":["MetaCyc:PWY-101","Wikipedia:Photolysis#Photolysis_in_photosynthesis"],"synonyms":[{"name":"photolysis","type":"related"}],"termid":"GO:0019684"}


id: GO:0005520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"insulin-like growth factor binding","synonyms":[{"name":"IGF binding","type":"exact"}],"termid":"GO:0005520"}


id: PBO:0062638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 7 pseudogene","termid":"PBO:0062638"}


id: GO:0106095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that catalyzes the reaction: 7-methylguanosine-5'-triphospho-5'-pholynucleotide + H20 = 7-methylguanosine-5'-phosphate + polynucleotide.","definition_xrefs":["GOC:lnp","PMID:26258763","PMID:22985415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"m7G(5')pppN diphosphatase complex","synonyms":[{"name":"7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase enzyme","type":"exact"},{"name":"DCS1 decapping scavenger complex","type":"exact"},{"name":"M(7)G(5')pppN pyrophosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN diphosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN pyrophosphatase enzyme","type":"exact"}],"termid":"GO:0106095"}


id: MONDO:0020459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"unstable hemoglobin disease","secondary_identifiers":["MEDGEN:82893","NANDO:2200625","ICD9:282.7","GARD:19670","SCTID:18273004","UMLS:C0272006","Orphanet:99139"],"termid":"MONDO:0020459","xrefs":{"Monarch":{"xref_id":"0020459"}}}


id: PBO:0064082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase","termid":"PBO:0064082"}


id: GO:0036132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 15-keto-prostaglandin + NAD(P)H + H+ -> 13,14-dihydro-15-keto-prostaglandin + NAD(P)+. This reaction is the reduction of 15-keto-prostaglandin.","definition_xrefs":["PMID:17449869","GOC:mw"],"gene_count":0,"genotype_count":0,"name":"obsolete 13-prostaglandin reductase activity (obsolete GO:0036132)","synonyms":[{"name":"15-oxoprostaglandin 13-reductase activity","type":"exact"}],"termid":"GO:0036132"}


id: GO:0015505
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95033],"is_not":false,"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: uracil(out) + cation(out) = uracil(in) + cation(in).","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transmembrane transporter activity","termid":"GO:0015210"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"uracil:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil permease activity","type":"related"},{"name":"uracil:cation symporter activity","type":"broad"}],"termid":"GO:0015505","terms_by_termid":{"GO:0015505":null}}


id: MOD:00371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-aspartic acid residues, three L-glutamic acid residues, an L-histidine residue, and a one-calcium, four-iron, four-oxygen cluster to bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide.","definition_xrefs":["PubMed:14764885","RESID:AA0366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","synonyms":[{"name":"4Mn-Ca-4O cluster","type":"exact"},{"name":"bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese tetroxide","type":"exact"},{"name":"mu3-1:2:3kappaO-oxido-mu3-1:3:4kappaO-oxido-mu3-2:3:4kappaO-oxido-mu4-1:2:4:5kappaO-oxido-N1'-histidino-O5-glutamato 2-manganese-O5,O5-glutamato 3-manganese-O4-aspartato 4-manganese-O4-aspartato-O5-glutamato 5-manganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:00371"}


id: GO:0048346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate determination","termid":"GO:0048345"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate determination","synonyms":[{"name":"activation of paraxial mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048346"}


id: PBO:0047287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and ankyrin repeat domains 1","termid":"PBO:0047287"}


id: GO:0018426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine. The polypeptide backbones of glycoproteins and mucin-like proteoglycans are extensively modified with a complex array of phosphoglycan chains that are linked to Ser/Thr-rich domains via a common Man-alpha1-phosphate-Ser linkage.","definition_xrefs":["RESID:AA0297"],"gene_count":0,"genotype_count":0,"name":"obsolete O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthetic process (obsolete GO:0018426)","synonyms":[{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine anabolism","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthesis","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine formation","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine synthesis","type":"exact"}],"termid":"GO:0018426"}


id: GO:0019781
data:
  {"annotated_genes":["SJAG_03950","SJAG_00878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73120,81468],"is_not":false,"summary":null,"term":"GO:0019781"}]},"cv_name":"molecular_function","definition":"Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade.","definition_xrefs":["PMID:12646924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00878":null,"SJAG_03950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"NEDD8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019944","EC:6.2.1.64"],"synonyms":[{"name":"RUB1 activating enzyme activity","type":"exact"}],"termid":"GO:0019781","terms_by_termid":{"GO:0019781":null}}


id: PR:O13310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orb6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase orb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.12","synonyms":[{"name":"Spom972h-orb6","type":"exact"}],"termid":"PR:O13310"}


id: PBO:0087865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the basic leucine zipper (bZIP) family; required for transcription of genes involved in resistance to arsenic compounds; directly binds trivalent arsenic (As(III)) as does K. lactis ortholog, KIYAP8","termid":"PBO:0087865"}


id: PBO:0068914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 157, pseudogene","termid":"PBO:0068914"}


id: PR:Q9UU87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase STK11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.01","secondary_identifiers":["UniProtKB:Q9UU87"],"synonyms":[{"name":"SPCC1919.01","type":"related"},{"name":"Spom972h-STK11","type":"exact"}],"termid":"PR:Q9UU87"}


id: MONDO:0009178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica Neurotrophica","secondary_identifiers":["SCTID:254176007","MESH:C562637","ICD9:757.39","UMLS:C0268368","MEDGEN:78666","OMIM:226500"],"synonyms":[{"name":"epidermolysis bullosa dystrophica Neurotrophica","type":"exact"},{"name":"epidermolysis bullosa progressiva, recessive","type":"related"},{"name":"epidermolysis bullosa with congenital deafness","type":"related"}],"termid":"MONDO:0009178","xrefs":{"Monarch":{"xref_id":"0009178"}}}


id: PBO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L9 (predicted)","termid":"PBO:0001688"}


id: PBO:0088601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ocaloacetate family anion","termid":"PBO:0088601"}


id: MONDO:0006151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic finding indicating the presence of dysplastic glandular epithelial cells in the colonic mucosa. There is no evidence of invasion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon dysplasia","secondary_identifiers":["EFO:1000183","MEDGEN:224903","NCIT:C4847","SCTID:308870004","UMLS:C1302363"],"synonyms":[{"name":"colonic dysplasia","type":"exact"},{"name":"dysplasia of colon","type":"exact"},{"name":"dysplasia of the colon","type":"exact"}],"termid":"MONDO:0006151","xrefs":{"Monarch":{"xref_id":"0006151"}}}


id: PBO:0089216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Sfr1","termid":"PBO:0089216"}


id: PR:000035569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BUB1:BUB3 complex whose components are encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:KER","PMID:22660415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1:BUB3 complex (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-(BUB1:BUB3)","type":"exact"}],"termid":"PR:000035569"}


id: FYPO:0002337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location, is elongated, and is inviable.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000004","FYPO:0000005","FYPO:0000138"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"elongated inviable vegetative cell, with mislocalized mononucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"inviable elongated mononucleate cell with displaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with asymmetrically localized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized nucleus","type":"exact"}],"termid":"FYPO:0002337"}


id: PBO:0003590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40 (predicted)","termid":"PBO:0003590"}


id: GO:1900978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"negatively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tatiopterin metabolic process","synonyms":[{"name":"down regulation of tatiopterin metabolic process","type":"exact"},{"name":"down regulation of tatiopterin metabolism","type":"exact"},{"name":"down-regulation of tatiopterin metabolic process","type":"exact"},{"name":"down-regulation of tatiopterin metabolism","type":"exact"},{"name":"downregulation of tatiopterin metabolic process","type":"exact"},{"name":"downregulation of tatiopterin metabolism","type":"exact"},{"name":"inhibition of tatiopterin metabolic process","type":"narrow"},{"name":"inhibition of tatiopterin metabolism","type":"exact"},{"name":"negative regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900978"}


id: GO:0140602
data:
  {"annotated_genes":["SJAG_04855","SJAG_03161","SJAG_04187","SJAG_04601","SJAG_03745","SJAG_04055","SJAG_03048","SJAG_00335","SJAG_03300","SJAG_04645","SJAG_00436","SJAG_04768","SJAG_01374","SJAG_01186","SJAG_00082","SJAG_01408","SJAG_00178","SJAG_00471","SJAG_04140","SJAG_03543","SJAG_01805","SJAG_00302","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60640,86935,88457,89453,90415,91710,93269,98543,101797,101880,103734,103828,104539,104925,105290,110773,111630,112185,112186,112187,114492,115092,116269],"is_not":false,"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"Inclusion bodies located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress or starvation.","definition_xrefs":["PMID:37128864","PMID:33176152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear inclusion body","termid":"GO:0042405"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00436":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleolar peripheral inclusion body","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"NuRs","type":"exact"},{"name":"nucleolar rings","type":"exact"}],"termid":"GO:0140602","terms_by_termid":{"GO:0140602":null}}


id: MONDO:0100354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 1","secondary_identifiers":["DOID:0060610","NCIT:C98982","GARD:15195","MESH:C536138","UMLS:C5542316","SCTID:253781004","OMIM:249210","MEDGEN:1778116","Orphanet:2241"],"synonyms":[{"name":"Berdon syndrome","type":"exact"},{"name":"MMIH syndrome","type":"broad"},{"name":"MMIHS","type":"broad"},{"name":"megacystis microcolon intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome, MMIH","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis-hydronephrosis syndrome","type":"broad"}],"termid":"MONDO:0100354","xrefs":{"Monarch":{"xref_id":"0100354"}}}


id: MONDO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic follicular conjunctivitis","secondary_identifiers":["UMLS:C0155147","ICD9:372.12","DOID:13326","MEDGEN:509808","SCTID:39429002"],"termid":"MONDO:0001685","xrefs":{"Monarch":{"xref_id":"0001685"}}}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: PBO:0084344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol synthase; an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide, a step in ergosterol biosynthesis; human LSS functionally complements the lethality of the erg7 null mutation","termid":"PBO:0084344"}


id: GO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tricarboxylic acid cycle intermediate metabolic process (obsolete GO:0006100)","synonyms":[{"name":"Krebs cycle intermediate metabolic process","type":"exact"},{"name":"Krebs cycle intermediate metabolism","type":"exact"},{"name":"TCA intermediate metabolic process","type":"exact"},{"name":"TCA intermediate metabolism","type":"exact"},{"name":"citric acid cycle intermediate metabolic process","type":"exact"},{"name":"citric acid cycle intermediate metabolism","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolic process","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolism","type":"exact"}],"termid":"GO:0006100"}


id: GO:0004774
data:
  {"annotated_genes":["SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77101,73515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004774","terms_by_termid":{"GO:0004775":null}}


id: GO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate + H2O = hydroxymethylpyrimidine phosphate + phosphate + H+.","definition_xrefs":["MetaCyc:RXN0-3543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity","secondary_identifiers":["RHEA:27914"],"synonyms":[{"name":"HMP-PP diphosphatase","type":"exact"},{"name":"HMP-PP pyrophosphatase","type":"exact"}],"termid":"GO:0002145"}


id: MONDO:1012286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"warts between hooves, non-human animal","termid":"MONDO:1011766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"warts between hooves, cattle","secondary_identifiers":["OMIA:001060-9913"],"termid":"MONDO:1012286","xrefs":{"Monarch":{"xref_id":"1012286"}}}


id: PBO:0042539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7","termid":"PBO:0042539"}


id: GO:0015744
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"succinate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015744","terms_by_termid":{"GO:0098720":null}}


id: PBO:0075516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM pointed domain containing ETS transcription factor","termid":"PBO:0075516"}


id: PBO:0058358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4731","termid":"PBO:0058358"}


id: GO:2001271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001271)","synonyms":[{"name":"negative regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001271"}


id: FYPO:0006035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitochondrial membrane potential, i.e. the electric potential existing across the mitochondrial membrane, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:14767070","PomBase:mah","GO:0051881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial membrane potential","synonyms":[{"name":"normal mitochondrial membrane polarization","type":"exact"},{"name":"normal mitochondrial membrane potential during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial membrane potential during vegetative growth","type":"exact"}],"termid":"FYPO:0006035"}


id: PBO:0053658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 824","termid":"PBO:0053658"}


id: MONDO:0009009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multi-system disease characterized by markedly impaired extracellular fibrinolysis leading to the formation of ligneous (fibrin-rich) pseudomembranes on mucosae.","definition_xrefs":["Orphanet:722"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"conjunctival disorder","termid":"MONDO:0006170"},{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hypoplasminogenemia","secondary_identifiers":["MESH:C580017","GARD:4380","SCTID:95840007","UMLS:C1968804","icd11.foundation:1240776230","MEDGEN:369859","OMIM:217090","MedDRA:10071570","SCTID:403435005","DOID:0111592","Orphanet:97231","ICD9:372.39"],"synonyms":[{"name":"hypoplasminogenemia","type":"exact"},{"name":"ligneous conjunctivitis","type":"related"},{"name":"plasminogen deficiency type 1","type":"exact"},{"name":"plasminogen deficiency, type 1","type":"exact"},{"name":"plasminogen deficiency, type I","type":"exact"},{"name":"type 1 plasminogen deficiency","type":"exact"}],"termid":"MONDO:0009009","xrefs":{"Monarch":{"xref_id":"0009009"}}}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: PBO:0064819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3B","termid":"PBO:0064819"}


id: GO:0048278
data:
  {"annotated_genes":["SJAG_04978","SJAG_01324","SJAG_01697","SJAG_03005","SJAG_01598","SJAG_03552","SJAG_00280","SJAG_04966","SJAG_01772","SJAG_03499","SJAG_01633","SJAG_03536","SJAG_03347","SJAG_02320","SJAG_02587","SJAG_04023","SJAG_00380","SJAG_00171","SJAG_03848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73729,77939,79621,99026,99832,100645,109226,109382,112276,117162],"is_not":false,"summary":null,"term":"GO:0048278"},{"annotations":[72205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[71539,60675,117834,81850,81588,76884,90043,91806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.","definition_xrefs":["GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01324":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03347":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04966":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"vesicle docking","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vesicle to membrane docking","type":"exact"}],"termid":"GO:0048278","terms_by_termid":{"GO:0006904":null,"GO:0048211":null,"GO:0048278":null}}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-5625123","Reactome:R-HSA-427645","GO:0015321","Reactome:R-HSA-5651971","Reactome:R-HSA-2872498","Reactome:R-HSA-427605","Reactome:R-HSA-5651685","Reactome:R-HSA-428609","Reactome:R-HSA-427656","Reactome:R-HSA-5651697","Reactome:R-HSA-5687585"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: MONDO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the pharynx.","definition_xrefs":["NCIT:C7545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"},{"relation_name":"is_a","term_name":"malignant tumor of neck","termid":"MONDO:0021310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pharynx cancer","secondary_identifiers":["EFO:0005577","DOID:0060119","MESH:D010610","UMLS:C0153405","MEDGEN:57554"],"synonyms":[{"name":"cancer of chordate pharynx","type":"exact"},{"name":"cancer of pharynx","type":"exact"},{"name":"chordate pharynx cancer","type":"exact"},{"name":"malignant chordate pharynx neoplasm","type":"exact"},{"name":"malignant neoplasm of chordate pharynx","type":"exact"},{"name":"malignant neoplasm of pharynx","type":"exact"},{"name":"malignant pharyngeal neoplasm","type":"exact"},{"name":"malignant pharyngeal tumor","type":"exact"},{"name":"malignant pharyngeal tumour","type":"exact"},{"name":"malignant pharynx neoplasm","type":"exact"},{"name":"malignant pharynx tumor","type":"exact"},{"name":"malignant pharynx tumour","type":"exact"},{"name":"malignant tumor of pharynx","type":"exact"},{"name":"malignant tumor of the pharynx","type":"exact"},{"name":"malignant tumour of pharynx","type":"exact"},{"name":"malignant tumour of the pharynx","type":"exact"},{"name":"pharyngeal cancer","type":"related"},{"name":"pharyngeal neoplasm","type":"exact"},{"name":"pharynx cancer","type":"exact"},{"name":"pharynx neoplasm","type":"broad"}],"termid":"MONDO:0005517","xrefs":{"Monarch":{"xref_id":"0005517"}}}


id: SO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that encodes multiple proteins from at least two non-overlapping regions.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Polycistronic_mRNA"],"synonyms":[{"name":"polycistronic mRNA","type":"exact"},{"name":"polycistronic processed transcript","type":"related"}],"termid":"SO:0000634"}


id: MONDO:1011797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy of the diaphragmatic muscles, non-human animal","secondary_identifiers":["OMIA:001319"],"termid":"MONDO:1011797","xrefs":{"Monarch":{"xref_id":"1011797"}}}


id: GO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:mah","GOC:mr","ISBN:0582227089","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"X chromosome","secondary_identifiers":["Wikipedia:X_chromosome"],"termid":"GO:0000805"}


id: GO:0015269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium cation by a channel that opens when a calcium cation has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated cation channel activity","termid":"GO:0005227"},{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"calcium-activated potassium channel activity","secondary_identifiers":["Reactome:R-HSA-9663752","Reactome:R-HSA-9667809"],"termid":"GO:0015269"}


id: PBO:0073839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A14 antisense RNA 1","termid":"PBO:0073839"}


id: PATO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001119 absolute momentum value (obsolete PATO:0001119)","termid":"PATO:0001119"}


id: MONDO:0019995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral resistance to thyroid hormones may be a cause of permanent congenital hypothyroidism, a permanent thyroid hormone deficiency that is present from birth.","definition_xrefs":["Orphanet:97927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral hypothyroidism","termid":"MONDO:0016412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral resistance to thyroid hormones","secondary_identifiers":["MEDGEN:902322","GARD:12734","UMLS:C4273673","SCTID:718193005"],"termid":"MONDO:0019995","xrefs":{"Monarch":{"xref_id":"0019995"}}}


id: GO:1990119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an RNA helicase.","definition_xrefs":["GOC:rb","PMID:23721653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0004857","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"RNA helicase inhibitor activity","synonyms":[{"name":"ATP-dependent RNA helicase inhibitor activity","type":"exact"}],"termid":"GO:1990119"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: PBO:0039865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27","termid":"PBO:0039865"}


id: GO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of muscle contraction is reduced. Muscle relaxation can involve a number of processes including the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases. In some muscles, calcium-independent pathways also play a role in muscle relaxation by decreasing the phosphorylation state of myosin light chain.","definition_xrefs":["PMID:19996365","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of muscle","termid":"GO:0090075"}


id: _global:directly_associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear.","definition_xrefs":["Wikipedia:Association_(statistics)","PATOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_associated_with","termid":"_global:directly_associated_with"}


id: GO:0015039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oxidized adrenodoxin + NADPH + H+ = reduced adrenodoxin + NADP+.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH-adrenodoxin reductase activity (obsolete GO:0015039)","synonyms":[{"name":"NADPH:adrenodoxin oxidoreductase activity","type":"related"},{"name":"adrenodoxin reductase activity","type":"broad"},{"name":"adrenodoxin-type ferredoxin reductase activity","type":"exact"}],"termid":"GO:0015039"}


id: GO:0052689
data:
  {"annotated_genes":["SJAG_00308","SJAG_04105","SJAG_04110","SJAG_05221","SJAG_04973","SJAG_02907","SJAG_02543","SJAG_03604","SJAG_01198","SJAG_02068","SJAG_01570","SJAG_01628","SJAG_00936","SJAG_00734","SJAG_02100","SJAG_04323","SJAG_04846","SJAG_01036","SJAG_02091","SJAG_04311","SJAG_02093","SJAG_01824","SJAG_00158","SJAG_04790","SJAG_05008","SJAG_01248","SJAG_03204","SJAG_02089","SJAG_02487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72457],"is_not":false,"summary":null,"term":"GO:0052689"},{"annotations":[76266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003847"},{"annotations":[74818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017057"},{"annotations":[75344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[81907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061685"},{"annotations":[79075,80540,72652,80241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047372"},{"annotations":[101596,77714,98157,79684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004045"},{"annotations":[113659,65948,93399,72506,67335,68989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[74625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050185"},{"annotations":[79172,80338,72856,78191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[80400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"},{"annotations":[76913,79180,76762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004771"},{"annotations":[58480,60232,71508,73245,93400,97974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a carboxylic ester bond.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00308":null,"SJAG_00734":null,"SJAG_00936":null,"SJAG_01036":null,"SJAG_01198":null,"SJAG_01248":null,"SJAG_01570":null,"SJAG_01628":null,"SJAG_01824":null,"SJAG_02068":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_03204":null,"SJAG_03604":null,"SJAG_04105":null,"SJAG_04110":null,"SJAG_04311":null,"SJAG_04323":null,"SJAG_04790":null,"SJAG_04846":null,"SJAG_04973":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"carboxylic ester hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004759","GO:0004302","Reactome:R-HSA-9749792","GO:0016789","KEGG_REACTION:R00630","GO:0004091","EC:3.1.1.-","Reactome:R-HSA-8937442","UM-BBD_reactionID:r1025","Reactome:R-HSA-5693691"],"synonyms":[{"name":"carboxylate esterase activity","type":"related"},{"name":"carboxylic esterase activity","type":"related"},{"name":"hydrolase activity acting on ester bonds","type":"related"}],"termid":"GO:0052689","terms_by_termid":{"GO:0003847":null,"GO:0004045":null,"GO:0004622":null,"GO:0004623":null,"GO:0004771":null,"GO:0004806":null,"GO:0017057":null,"GO:0047372":null,"GO:0050185":null,"GO:0051500":null,"GO:0051722":null,"GO:0052689":null,"GO:0061685":null}}


id: PBO:0069030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 275, pseudogene","termid":"PBO:0069030"}


id: FYPO:0007948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal, is multinucleate and multiseptate.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated spore","termid":"FYPO:0001123"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"},{"relation_name":"is_a","term_name":"multinucleate multiseptate cell","termid":"FYPO:0005277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated multinucleate multiseptate spore","termid":"FYPO:0007948"}


id: GO:0140288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF subcomplex that incorporates two mutually exclusive paralogs, GLTSCR1 (glioma tumor suppressor candidate region gene 1) or GLTSCR1L (GLTSCR1-like), BRD9 (bromodomain-containing 9) and the BAF subunits BAF155, BAF60, SS18, BAF53a, and BRG1/BRM.","definition_xrefs":["PMID:29374058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GBAF complex","termid":"GO:0140288"}


id: PBO:0109227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 pseudogene 1","termid":"PBO:0109227"}


id: GO:0044177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi apparatus","synonyms":[{"name":"host Golgi apparatus","type":"exact"}],"termid":"GO:0044177"}


id: GO:0060172
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78026],"is_not":false,"summary":null,"term":"GO:0060172"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an astral microtubule. An astral microtubule is any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"astral microtubule depolymerization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0060172","terms_by_termid":{"GO:0060172":null}}


id: PBO:0078929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-1","termid":"PBO:0078929"}


id: GO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["GOC:dph","PMID:19221029"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: PBO:0085876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0085876"}


id: GO:0008476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate.","definition_xrefs":["EC:2.8.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-tyrosine sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-9668148","RHEA:16801","MetaCyc:PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-9668023","Reactome:R-HSA-8954262"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:protein-tyrosine O-sulfotransferase activity","type":"related"},{"name":"protein-tyrosine sulphotransferase activity","type":"exact"},{"name":"tyrosylprotein sulfotransferase activity","type":"related"}],"termid":"GO:0008476"}


id: GO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in cardiac conduction","synonyms":[{"name":"cell-cell signalling involved in cardiac conduction","type":"exact"}],"termid":"GO:0086019"}


id: FYPO:0006387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle pole body organization is abnormal. Mitotic spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the mitotic spindle pole body (SPB).","definition_xrefs":["GO:1905047","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body organization","synonyms":[{"name":"abnormal mitotic SPB organization","type":"exact"},{"name":"abnormal mitotic spindle pole body organisation","type":"exact"}],"termid":"FYPO:0006387"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["RHEA:13453","EC:2.8.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02159","MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: PBO:0038637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 2","termid":"PBO:0038637"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_01479","SJAG_03762","SJAG_00544","SJAG_03277","SJAG_01650","SJAG_01159","SJAG_04672","SJAG_01026","SJAG_02573","SJAG_04342","SJAG_02628","SJAG_05694","SJAG_03276","SJAG_03696","SJAG_05010","SJAG_02239","SJAG_04640","SJAG_01548","SJAG_02419","SJAG_03023","SJAG_00474","SJAG_04427","SJAG_02164","SJAG_04772","SJAG_16457","SJAG_04480","SJAG_03498","SJAG_01222","SJAG_00686","SJAG_16454","SJAG_03214","SJAG_03157","SJAG_02263","SJAG_02995","SJAG_01512","SJAG_02592","SJAG_04744","SJAG_01954","SJAG_00507","SJAG_01317","SJAG_00391","SJAG_03283","SJAG_03424","SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57668,60525,68400,72365,74345,74780,75897,76394,78537,80564,81140,86964,87809,88615,88946,89158,89362,89653,89729,89771,91022,92024,92484,92485,93840,94040,94041,94274,95579,96611,97290,98433,99442,104859,105119,105212,105213,106491,109451,109553,110651,112912,113210,116892],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["GOC:ans","PMID:17284590","PMID:17967451","PMID:20368989","PMID:17601829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: FYPO:0005673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is lower than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0003143"},{"relation_name":"is_a","term_name":"decreased level of ubiquitinated protein in cell","termid":"FYPO:0005226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005673"}


id: FYPO:0004444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21832151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"reduced protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004444"}


id: PBO:0085494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; contributes to regulation of telomeric silencing; sequestered to the nucleolus under stress conditions","termid":"PBO:0085494"}


id: GO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:mah","GOC:rph","CHEBI:17672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bzn"],"synonyms":[{"name":"carbamoyl phosphate metabolism","type":"exact"}],"termid":"GO:0070408"}


id: PBO:0089371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox19","termid":"PBO:0089371"}


id: GO:0006238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates CMP, cytidine monophosphate, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CMP biosynthetic process","termid":"GO:0009224"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CMP salvage","synonyms":[{"name":"cytidine monophosphate salvage","type":"exact"}],"termid":"GO:0006238"}


id: MONDO:0023061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamel hypoplasia cataract hydrocephaly","termid":"MONDO:0023061","xrefs":{"Monarch":{"xref_id":"0023061"}}}


id: GO:0008162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclodiene resistance (obsolete GO:0008162)","synonyms":[{"name":"cyclodiene resistance","type":"exact"}],"termid":"GO:0008162"}


id: PR:Q9USN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin beta-like protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.02","secondary_identifiers":["UniProtKB:Q9USN3"],"synonyms":[{"name":"Spom972h-TBL3","type":"exact"},{"name":"U3 snoRNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN3"}


id: PBO:0040142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 5","termid":"PBO:0040142"}


id: MONDO:0014963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shashi-Pena syndrome","secondary_identifiers":["OMIM:617190","MEDGEN:934639","UMLS:C4310672"],"synonyms":[{"name":"SHAPNS","type":"exact"},{"name":"Shashi-Pena syndrome","type":"exact"},{"name":"Shashi-Pena syndrome; SHAPNS","type":"exact"}],"termid":"MONDO:0014963","xrefs":{"Monarch":{"xref_id":"0014963"}}}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: PBO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_apoptosis","termid":"PBO:0031589"}


id: PBO:0068323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 24","termid":"PBO:0068323"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["GARD:918","SCTID:720573009","MESH:C536242","UMLS:C1862082","MEDGEN:350585","OMIM:113477"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: PR:O42956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- art1 gene.","definition_xrefs":["UniProtKB:O42956","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.08c","synonyms":[{"name":"Spom972h-art1","type":"exact"}],"termid":"PR:O42956"}


id: PBO:0041707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 2","termid":"PBO:0041707"}


id: GO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to morphine","termid":"GO:0043278"},{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to morphine","termid":"GO:0071315"}


id: PBO:0004145
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during nucleotide depletion","termid":"PBO:0004145"}


id: GO:0060132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a prolactin secreting cell over time, from its formation to the mature structure. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"prolactin secreting cell differentiation","termid":"GO:0060127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell development","synonyms":[{"name":"epsilon-acidophil development","type":"exact"},{"name":"lactotrope development","type":"exact"},{"name":"lactotroph development","type":"exact"},{"name":"lactotropic cell development","type":"exact"},{"name":"mammotrope development","type":"exact"},{"name":"mammotroph development","type":"exact"},{"name":"mammotrophic cell development","type":"exact"},{"name":"mammotropic cell development","type":"exact"}],"termid":"GO:0060132"}


id: PBO:0077750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 membrane trafficking protein","termid":"PBO:0077750"}


id: GO:0008797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = fumarate + NH3.","definition_xrefs":["EC:4.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspartate ammonia-lyase activity","secondary_identifiers":["MetaCyc:ASPARTASE-RXN","RHEA:16601"],"synonyms":[{"name":"L-aspartase activity","type":"related"},{"name":"L-aspartate ammonia-lyase (fumarate-forming)","type":"related"},{"name":"L-aspartate ammonia-lyase activity","type":"related"},{"name":"aspartase activity","type":"related"},{"name":"fumaric aminase activity","type":"related"}],"termid":"GO:0008797"}


id: PBO:0018049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Sir2","termid":"PBO:0018049"}


id: PBO:0078611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64B","termid":"PBO:0078611"}


id: PBO:0054691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2100","termid":"PBO:0054691"}


id: MONDO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brachymetapody anodontia hypotrichosis albinoidism (obsolete MONDO:0022605)","termid":"MONDO:0022605","xrefs":{"Monarch":{"xref_id":"0022605"}}}


id: GO:0048364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo.","definition_xrefs":["GOC:jid","PO:0009005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"root system development","termid":"GO:0022622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root development","termid":"GO:0048364"}


id: GO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the carbon 5 (C5) residue to form peptidyl-5-methyl-L-arginine.","definition_xrefs":["RESID:AA0272","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine C5-methylation (obsolete GO:0018181)","synonyms":[{"name":"peptidyl-arginine 5-methylation","type":"exact"}],"termid":"GO:0018181"}


id: GO:1900045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K63-linked ubiquitination","termid":"GO:1900044"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein K63-linked ubiquitination","synonyms":[{"name":"down regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down regulation of protein K63-linked ubiquitination","type":"related"},{"name":"down-regulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"down-regulation of protein K63-linked ubiquitination","type":"related"},{"name":"downregulation of protein K63-linked polyubiquitination","type":"exact"},{"name":"downregulation of protein K63-linked ubiquitination","type":"related"},{"name":"inhibition of protein K63-linked polyubiquitination","type":"exact"},{"name":"inhibition of protein K63-linked ubiquitination","type":"related"},{"name":"negative regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900045"}


id: GO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor of a target cell. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:15728447","PMID:15585605","GOC:add","GO_REF:0000022","ISBN:0781735149","PMID:12467241","PMID:12855817","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-168898"],"synonyms":[{"name":"TLR signaling pathway","type":"exact"},{"name":"toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002224"}


id: MONDO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-pituitary and cerebellar defects-small sella turcica syndrome is characterized by short stature, anterior pituitary hormone deficiency, small sella turcica, and a hypoplastic anterior hypophysis associated with pointed cerebellar tonsils. It has been described in three generations of a large French kindred. Ectopia of the posterior hypophysis was observed in some patients. The syndrome is transmitted as a dominantly inherited trait and is caused by a germline mutation within the LIM-homeobox transcription factor LHX4 gene (1q25).","definition_xrefs":["Orphanet:85442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"short stature-pituitary and cerebellar defects-small sella turcica syndrome","secondary_identifiers":["MEDGEN:394816","GARD:10604","MESH:C567492","OMIM:262700","UMLS:C2678408"],"synonyms":[{"name":"CPHD4","type":"related"},{"name":"pituitary hormone deficiency, combined 4","type":"related"},{"name":"pituitary hormone deficiency, combined with or without cerebellar defects","type":"related"},{"name":"pituitary hormone deficiency, combined, 4","type":"related"},{"name":"pituitary hormone deficiency, combined, type 4","type":"exact"},{"name":"pituitary hormone deficiency, combined, with or without cerebellar defects","type":"related"},{"name":"short stature, pituitary and cerebellar defects and small sella turcica","type":"related"},{"name":"short stature, pituitary and cerebellar defects, and small sella turcica","type":"related"}],"termid":"MONDO:0009880","xrefs":{"Monarch":{"xref_id":"0009880"}}}


id: MOD:01685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino group with a alpha-palmitoylamino group.","definition_xrefs":["Unimod:47#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"alpha-amino palmitoylated residue","synonyms":[{"name":"N2PamRes","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:01685"}


id: GO:0102598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin D + NADP + H2O.","definition_xrefs":["EC:1.14.14.123","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 7-beta-monooxygenase activity","secondary_identifiers":["RHEA:41472","MetaCyc:RXN-15382"],"termid":"GO:0102598"}


id: MONDO:1012134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin G2 deficiency, non-human animal","termid":"MONDO:1011728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G2 deficiency, cattle","secondary_identifiers":["OMIA:000555-9913"],"termid":"MONDO:1012134","xrefs":{"Monarch":{"xref_id":"1012134"}}}


id: GO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine.","definition_xrefs":["RHEA:17753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-ribosylhomocysteine lyase activity","secondary_identifiers":["KEGG_REACTION:R01291","GO:0019138","EC:4.4.1.21","MetaCyc:RIBOSYLHOMOCYSTEINASE-RXN"],"synonyms":[{"name":"LuxS","type":"related"},{"name":"S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]","type":"related"},{"name":"S-ribosylhomocysteinase activity","type":"exact"},{"name":"ribosylhomocysteinase activity","type":"exact"}],"termid":"GO:0043768"}


id: MOD:00668
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a decanoyloxy group.","definition_xrefs":["Unimod:449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decanoylated residue","termid":"MOD:00667"},{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-decanoylated residue","synonyms":[{"name":"Decanoyl","type":"related"},{"name":"ODecRes","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00668"}


id: GO:1903344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GOC:sart","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein polyglycylation","termid":"GO:1903344"}


id: GO:0018623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + NADH + H+ + O2 = catechol + CO2 + NAD+.","definition_xrefs":["EC:1.14.12.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:BENZOATE-12-DIOXYGENASE-RXN","UM-BBD_enzymeID:r0245","RHEA:12633"],"synonyms":[{"name":"benzoate dioxygenase activity","type":"related"},{"name":"benzoate hydroxylase activity","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"},{"name":"benzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating, decarboxylating)","type":"related"},{"name":"benzoic hydroxylase activity","type":"related"}],"termid":"GO:0018623"}


id: PR:Q10265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock cognate 71 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.02c","secondary_identifiers":["UniProtKB:Q10265"],"synonyms":[{"name":"Spom972h-HSPA8","type":"exact"}],"termid":"PR:Q10265"}


id: PBO:0040000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13A","termid":"PBO:0040000"}


id: PBO:0110360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 4","termid":"PBO:0110360"}


id: MONDO:0800180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited porphyria in which the cause of the disease is monoallelic or biallelic variants in the CPOX gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180","xrefs":{"Monarch":{"xref_id":"0800180"}}}


id: _global:interaction_genotype_a
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_a","termid":"_global:interaction_genotype_a"}


id: PBO:0047879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(p15)","termid":"PBO:0047879"}


id: GO:2000749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rDNA heterochromatin formation.","definition_xrefs":["PMID:10899127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"positively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"positive regulation of rDNA heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at rDNA","type":"broad"},{"name":"positive regulation of chromatin silencing at ribosomal DNA","type":"broad"},{"name":"positive regulation of heterochromatic silencing at rDNA","type":"broad"},{"name":"positive regulation of rDNA chromatin silencing","type":"broad"},{"name":"positive regulation of rDNA heterochromatin assembly","type":"exact"},{"name":"positive regulation of ribosomal DNA heterochromatin assembly","type":"exact"}],"termid":"GO:2000749"}


id: PBO:0027368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_amino_acid_level","termid":"PBO:0027368"}


id: PBO:0085352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; glutathione peroxidase activity is neuroprotective in models of Huntington's disease; GPX1 has a paralog, HYR1, that arose from the whole genome duplication","termid":"PBO:0085352"}


id: MONDO:0009954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with odontal and/or periodontal component (obsolete MONDO:0015336)","termid":"MONDO:0015336"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ramon syndrome","secondary_identifiers":["GARD:7523","icd11.foundation:122538435","Orphanet:3019","MEDGEN:208669","OMIM:266270","UMLS:C0796133","MESH:C535285"],"synonyms":[{"name":"Ramon syndrome","type":"exact"},{"name":"cherubism, gingival fibromatosis, epilepsy, mental deficiency, hypertrichosis, and stunted Growth","type":"related"},{"name":"cherubism-gingival fibromatosis-intellectual disability syndrome","type":"exact"},{"name":"gingival fibromatosis combined with cherubism","type":"related"}],"termid":"MONDO:0009954","xrefs":{"Monarch":{"xref_id":"0009954"}}}


id: RO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_with","termid":"RO:0002224"}


id: MONDO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ependymoblastoma (obsolete MONDO:0003146)","termid":"MONDO:0003146","xrefs":{"Monarch":{"xref_id":"0003146"}}}


id: GO:1904571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21685449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"positively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of selenocysteine incorporation","synonyms":[{"name":"activation of selenocysteine incorporation","type":"narrow"},{"name":"up regulation of selenocysteine incorporation","type":"exact"},{"name":"up-regulation of selenocysteine incorporation","type":"exact"},{"name":"upregulation of selenocysteine incorporation","type":"exact"}],"termid":"GO:1904571"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: PBO:0078580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 53C, pseudogene","termid":"PBO:0078580"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: PR:Q9UTK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vrg4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.18","synonyms":[{"name":"GMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-vrg4","type":"exact"}],"termid":"PR:Q9UTK8"}


id: GO:0045177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical part of cell","synonyms":[{"name":"apical region of cell","type":"exact"}],"termid":"GO:0045177"}


id: GO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parathyroid hormone","synonyms":[{"name":"response to parathyroid hormone stimulus","type":"exact"}],"termid":"GO:0071107"}


id: MONDO:0014695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glioma susceptibility 9 (obsolete MONDO:0014695)","termid":"MONDO:0014695","xrefs":{"Monarch":{"xref_id":"0014695"}}}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: PR:P0CT67
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1802 gene.","definition_xrefs":["UniProtKB:P0CT67","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.01c","synonyms":[{"name":"Spom972h-rps1802","type":"exact"}],"termid":"PR:P0CT67"}


id: PBO:0062699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily D member 1","termid":"PBO:0062699"}


id: PR:Q9P6J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6J4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1683.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.06c","synonyms":[{"name":"Spom972h-SPBC1683.06c","type":"exact"}],"termid":"PR:Q9P6J4"}


id: GO:0007524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult visceral muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral muscle development","termid":"GO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult visceral muscle development","termid":"GO:0007524"}


id: SO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_gene","termid":"SO:0002360"}


id: MONDO:0005097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from squamous bronchial epithelial cells. It may be keratinizing or non-keratinizing. Keratinizing squamous cell carcinoma is characterized by the presence of keratinization, pearl formation, and/or intercellular bridges. Non-keratinizing squamous cell carcinoma is characterized by the absence of keratinization, pearl formation, and intercellular bridges. Cigarette smoking and arsenic exposure are strongly associated with squamous cell lung carcinoma.","definition_xrefs":["NCIT:C3493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"squamous cell lung carcinoma","secondary_identifiers":["ONCOTREE:LUSC","EFO:0000708","MEDGEN:56202","UMLS:C0149782","SCTID:254634000","DOID:3907","ICD9:162.9"],"synonyms":[{"name":"epidermoid cell carcinoma of lung","type":"exact"},{"name":"epidermoid cell carcinoma of the lung","type":"exact"},{"name":"epidermoid cell lung carcinoma","type":"exact"},{"name":"lung squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lung","type":"exact"},{"name":"squamous cell carcinoma of the lung","type":"exact"},{"name":"squamous cell lung cancer","type":"exact"},{"name":"squamous cell lung carcinoma","type":"exact"}],"termid":"MONDO:0005097","xrefs":{"Monarch":{"xref_id":"0005097"}}}


id: PBO:0087619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; Cop9 signalosome is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling","termid":"PBO:0087619"}


id: GO:0007576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell aging process that results in the nucleolus breaking down into fragments.","definition_xrefs":["PMID:9271578","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation (obsolete GO:0007576)","synonyms":[{"name":"nucleolar size increase","type":"related"}],"termid":"GO:0007576"}


id: PBO:0064623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrophosphatase (inorganic) 1 pseudogene","termid":"PBO:0064623"}


id: MONDO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"infundibulocystic basal cell carcinoma","secondary_identifiers":["MESH:C537655","UMLS:C1304297","GARD:9788","NCIT:C27540","MEDGEN:220984","OMIM:604451","DOID:4279"],"synonyms":[{"name":"basal cell carcinoma with follicular differentiation","type":"related"},{"name":"basal cell carcinoma, infundibulocystic","type":"related"},{"name":"skin infundibulocystic basal cell carcinoma","type":"exact"}],"termid":"MONDO:0011465","xrefs":{"Monarch":{"xref_id":"0011465"}}}


id: GO:0090474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibasic protein processing","termid":"GO:0090472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"arg-arg specific dibasic protein processing","termid":"GO:0090474"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: MONDO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type C","secondary_identifiers":["OMIMPS:609308"],"termid":"MONDO:0000173","xrefs":{"Monarch":{"xref_id":"0000173"}}}


id: MONDO:1011467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, dog","secondary_identifiers":["OMIA:000037-9615"],"termid":"MONDO:1011467","xrefs":{"Monarch":{"xref_id":"1011467"}}}


id: MONDO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by Bacillus anthracis bacteria. It may affect the lungs, gastrointestinal tract, or skin. Patients with lung infection present with fever, headaches, cough, chest pain and shortness of breath. Patients with gastrointestinal infection present with nausea, vomiting and bloody diarrhea. Patients with skin infection develop blisters and ulcers.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Bacillaceae infectious disease","termid":"MONDO:0006923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthrax infection","secondary_identifiers":["DOID:7427","MESH:D000881","ICD9:022","UMLS:C0003175","EFO:0000778","ICD9:022.9","SCTID:409498004","NCIT:C84565","ICD9:022.8","MEDGEN:8110"],"synonyms":[{"name":"Bacillus anthracis caused disease or disorder","type":"exact"},{"name":"Bacillus anthracis disease or disorder","type":"exact"},{"name":"Bacillus anthracis infectious disease","type":"exact"},{"name":"anthrax","type":"exact"},{"name":"anthrax disease","type":"related"}],"termid":"MONDO:0005119","xrefs":{"Monarch":{"xref_id":"0005119"}}}


id: MONDO:0030449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 118, with cochlear aplasia","secondary_identifiers":["OMIM:619553","MEDGEN:1794206","UMLS:C5561996"],"synonyms":[{"name":"DFNB118","type":"exact"},{"name":"deafness, autosomal recessive 118, with cochlear aplasia","type":"narrow"}],"termid":"MONDO:0030449","xrefs":{"Monarch":{"xref_id":"0030449"}}}


id: FYPO:0005527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions is normal (i.e. indistinguishable from wild type). Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PMID:26205977","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal subtelomeric chromatin knob formation","synonyms":[{"name":"normal frequency of knob-containing nuclei","type":"related"},{"name":"normal subtelomeric chromatin condensation","type":"broad"},{"name":"normal subtelomeric chromatin knob assembly","type":"exact"}],"termid":"FYPO:0005527"}


id: GO:1904626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","PMID:22988142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"positively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glycine secretion, neurotransmission","synonyms":[{"name":"activation of glycine secretion, neurotransmission","type":"narrow"},{"name":"up regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"up-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"upregulation of glycine secretion, neurotransmission","type":"exact"}],"termid":"GO:1904626"}


id: PBO:0054154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1521","termid":"PBO:0054154"}


id: GO:0044524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by the addition of sulfur.","definition_xrefs":["PMID:22169477","GOC:jl","PMID:8161529","PMID:19903941","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein sulfhydration","termid":"GO:0044524"}


id: GO:0010190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"cytochrome b6f complex assembly","synonyms":[{"name":"cytochrome b6f complex biogenesis","type":"exact"}],"termid":"GO:0010190"}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: GO:0043269
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90688,112952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[101670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion transport","type":"broad"}],"termid":"GO:0043269","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0031173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_normal_size_cell","termid":"PBO:0031173"}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:36499010","PMID:36272560","PMID:37159291","PMID:19720651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: PBO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic ID does not reflect chromosome","termid":"PBO:0004238"}


id: MOD:00606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:9254591","Unimod:286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:00606"}


id: PBO:0068910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 153, pseudogene","termid":"PBO:0068910"}


id: GO:0019985
data:
  {"annotated_genes":["SJAG_00406","SJAG_04190","SJAG_00153","SJAG_16460","SJAG_02667","SJAG_00573","SJAG_04089","SJAG_00611","SJAG_04791","SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97813],"is_not":false,"summary":null,"term":"GO:0019985"},{"annotations":[58863,61555,72201,102406,68147,98814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[103755,95371,79752,102407,79451,72199,75008,76718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[111341],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"The replication of damaged DNA by synthesis across a lesion in the template strand; a specialized DNA polymerase or replication complex inserts a defined nucleotide across from the lesion which allows DNA synthesis to continue beyond the lesion. This process can be mutagenic depending on the damaged nucleotide and the inserted nucleotide.","definition_xrefs":["PMID:10535901","GOC:vw","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"is_a","term_name":"postreplication repair","termid":"GO:0006301"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_02667":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"translesion synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-73893"],"synonyms":[{"name":"bypass DNA synthesis","type":"exact"}],"termid":"GO:0019985","terms_by_termid":{"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904332":null}}


id: GO:1901377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic heteropentacyclic compound catabolic process (obsolete GO:1901377)","synonyms":[{"name":"organic heteropentacyclic compound breakdown","type":"exact"},{"name":"organic heteropentacyclic compound catabolism","type":"exact"},{"name":"organic heteropentacyclic compound degradation","type":"exact"}],"termid":"GO:1901377"}


id: FYPO:0001067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of tyrosine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal tyrosine import","synonyms":[{"name":"abnormal L-tyrosine import","type":"exact"},{"name":"abnormal L-tyrosine import across plasma membrane","type":"exact"},{"name":"abnormal tyrosine import during mitotic cell cycle","type":"related"},{"name":"abnormal tyrosine import during vegetative growth","type":"exact"},{"name":"abnormal tyrosine import into cell","type":"exact"},{"name":"abnormal tyrosine uptake","type":"exact"}],"termid":"FYPO:0001067"}


id: MOD:01430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a (13)C labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O isotope tagged reagent","termid":"MOD:01430"}


id: MOD:00233
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoguanosine through a phosphoramide ester bond to form N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["Unimod:413#K","DeltaMass:304","PubMed:6264433","RESID:AA0228","PubMed:6092377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-guanosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-guanosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-guanylic-N6-L-lysine","type":"exact"},{"name":"5'phos Guanosyl","type":"exact"},{"name":"ACT_SITE N6-GMP-lysine intermediate","type":"exact"},{"name":"L-lysine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(zeta)-5'-guanylic-lysine","type":"exact"},{"name":"N6-(5'-guanylyl)-lysine","type":"exact"},{"name":"N6-(phospho-5'-guanosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-guanosine phosphoramidester","type":"exact"},{"name":"N6GMPLys","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"epsilon-5'-guanylic-L-lysine","type":"exact"},{"name":"lysine guanosine-5'-monophosphate","type":"exact"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:00233"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:22995177","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein kinase activity (obsolete GO:1904029)","termid":"GO:1904029"}


id: GO:0010212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.","definition_xrefs":["PMID:12509526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionizing radiation","synonyms":[{"name":"response to ionising radiation","type":"exact"},{"name":"response to ionizing radiation stimulus","type":"exact"}],"termid":"GO:0010212"}


id: PBO:0044784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death effector domain containing 2","termid":"PBO:0044784"}


id: PBO:0082859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPPs are multimeric guanine nucleotide-exchange factors for GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); mutation leads to defects in endocytic recycling, block in sporulation/meiosis; mutations in human homolog TRAPPC2 cause spondyloepiphyseal dysplasia tarda, TRAPPC2 can complement yeast null mutant","termid":"PBO:0082859"}


id: GO:1990585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-prolyl-[protein] + UDP-beta-L-arabinofuranose = H+ + O-(beta-L-arabinofuranosyl)-trans-4-hydroxy-L-prolyl-[protein] + UDP.","definition_xrefs":["PMID:24036508","RHEA:49472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hydroxyproline O-arabinosyltransferase activity","secondary_identifiers":["EC:2.4.2.58","MetaCyc:RXN-15011"],"synonyms":[{"name":"HPAT","type":"exact"}],"termid":"GO:1990585"}


id: MONDO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cylindrical spirals myopathy (obsolete MONDO:0015754)","termid":"MONDO:0015754","xrefs":{"Monarch":{"xref_id":"0015754"}}}


id: MONDO:0007852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-deafness syndrome is a keratinization disorder characterized by focal or diffuse palmoplantar keratoderma. A patchy distribution is observed with accentuation on the thenars, hypothenars and the arches of the feet. The disease becomes apparent in infancy and is associated with sensorineural hearing loss that shows a variable age of onset. Due to genetic and clinical similarities, it has been proposed that palmoplantar keratoderma-deafness syndrome, knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome and keratoderma hereditarium mutilans may represent variants of one broad disorder of syndromic deafness with heterogeneous phenotype. The disease is transmitted in an autosomal dominant manner with incomplete penetrance.","definition_xrefs":["Orphanet:2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-deafness syndrome","secondary_identifiers":["MEDGEN:332030","MESH:C536152","UMLS:C1835672","OMIM:148350","GARD:3094","DOID:0111505"],"synonyms":[{"name":"PPK-deafness syndrome","type":"exact"},{"name":"diffuse palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"focal palmoplantar keratoderma with sensorineural deafness (subtype)","type":"related"},{"name":"hereditary palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"keratoderma palmoplantar deafness","type":"related"},{"name":"keratoderma palmoplantar, with deafness","type":"related"},{"name":"keratoderma, palmoplantar, with deafness","type":"related"},{"name":"palmoplantar hyperkeratosis-deafness syndrome","type":"exact"},{"name":"palmoplantar hyperkeratosis-hearing loss syndrome","type":"exact"},{"name":"palmoplantar keratoderma and sensorineural deafness","type":"related"},{"name":"palmoplantar keratoderma-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0007852","xrefs":{"Monarch":{"xref_id":"0007852"}}}


id: MONDO:0007939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 2","secondary_identifiers":["OMIM:154275","UMLS:C2930981","MESH:C535695","MEDGEN:419301"],"synonyms":[{"name":"MHS2","type":"related"},{"name":"Mhs2","type":"related"},{"name":"malignant hyperpyrexia susceptibility type 2","type":"related"},{"name":"malignant hyperthermia susceptibility 2","type":"exact"},{"name":"malignant hyperthermia susceptibility type 2","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 2","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0007939","xrefs":{"Monarch":{"xref_id":"0007939"}}}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: PR:000085717
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:37459529"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K36)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht1/Me(K36)","type":"exact"}],"termid":"PR:000085717"}


id: GO:0000959
data:
  {"annotated_genes":["SJAG_03289","SJAG_04367","SJAG_04377","SJAG_04885","SJAG_00997","SJAG_02526","SJAG_04700","SJAG_01948","SJAG_00634","SJAG_06586","SJAG_02288","SJAG_02977","SJAG_02383","SJAG_01704","SJAG_02991","SJAG_00255","SJAG_00358","SJAG_00186","SJAG_00077","SJAG_02302","SJAG_03014","SJAG_00865","SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98463,114029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090616"},{"annotations":[113476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000958"},{"annotations":[95750,103462,89421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[90248,89844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000957"},{"annotations":[87186,71823,82187,117535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[79876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[77245,118247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[93743,106434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[92271,77994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[97683,94633,86861],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006391"},{"annotations":[94154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving RNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00186":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00634":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_01948":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02383":null,"SJAG_02526":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_03014":null,"SJAG_03289":null,"SJAG_04367":null,"SJAG_04377":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000959","terms_by_termid":{"GO:0000957":null,"GO:0000958":null,"GO:0006391":null,"GO:0070127":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0090616":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AJ member 1","termid":"PBO:0061971"}


id: MONDO:1012745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant cystinuria that occurs in dogs due to a mutation in the SLC7A9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant cystinuria, SLC7A9-related, dog","secondary_identifiers":["OMIA:001880-9615"],"synonyms":[{"name":"cystinuria, type II - B, dog","type":"related"}],"termid":"MONDO:1012745","xrefs":{"Monarch":{"xref_id":"1012745"}}}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,4S)-menthone + NADP+ = (R)-pulegone + H+ + NADPH. Also converts (2R,5R)-isomenthone into (R)-pulegone.","definition_xrefs":["EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-pulegone reductase (NADP+) activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: PBO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.61","termid":"PBO:0000226"}


id: PBO:0078543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 35","termid":"PBO:0078543"}


id: MONDO:0024183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"beriberi","termid":"MONDO:0006676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wet beriberi","secondary_identifiers":["DOID:0070317","UMLS:C0268669","MEDGEN:541400","icd11.foundation:1753713002"],"termid":"MONDO:0024183","xrefs":{"Monarch":{"xref_id":"0024183"}}}


id: GO:0090357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of L-tryptophan metabolic process","synonyms":[{"name":"regulation of tryptophan metabolic process","type":"related"},{"name":"regulation of tryptophan metabolism","type":"exact"}],"termid":"GO:0090357"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["UniProtKB:O13701","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: GO:0030303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptide bonds in collagen with preferential cleavage where P1', P2' and P3' are hydrophobic residues; action on collagen types III, IV and V is weak.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 2 activity (obsolete GO:0030303)","synonyms":[{"name":"MMP-10","type":"exact"},{"name":"matrix metalloproteinase 10 activity","type":"related"},{"name":"proteoglycanase 2","type":"related"},{"name":"stromelysin 2 activity","type":"exact"},{"name":"transin 2 activity","type":"related"}],"termid":"GO:0030303"}


id: PBO:0053057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARS2 antisense RNA 1","termid":"PBO:0053057"}


id: PR:P14605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyr1 gene.","definition_xrefs":["UniProtKB:P14605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.03","synonyms":[{"name":"ATP pyrophosphate-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyr1","type":"exact"},{"name":"adenylyl cyclase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14605"}


id: GO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a circular structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a circular episome","synonyms":[{"name":"establishment of circular plasmid latency","type":"exact"},{"name":"establishment of latency as a circular plasmid","type":"exact"}],"termid":"GO:0075529"}


id: MONDO:0010209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disorder of purine metabolism characterized by the isolated deficiency of xanthine dehydrogenase, causing hyperxanthinemia with low or absent uric acid and xanthinuria, leading to urolithiasis, hematuria, renal colic and urinary tract infections, while some patients are asymptomatic and others suffer from kidney failure. Less common manifestations include arthropathy, myopathy and duodenal ulcer.","definition_xrefs":["Orphanet:93601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary xanthinuria","termid":"MONDO:0018106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"xanthinuria type I","secondary_identifiers":["MEDGEN:82771","MESH:C562584","OMIM:278300","SCTID:72682008","UMLS:C0268118","GARD:5621","DOID:0070452"],"synonyms":[{"name":"XAN1","type":"exact"},{"name":"XDH deficiency","type":"broad"},{"name":"XO deficiency","type":"broad"},{"name":"XOR deficiency","type":"broad"},{"name":"hereditary xanthinuria, type I","type":"related"},{"name":"isolated xanthine oxidase deficiency","type":"exact"},{"name":"type 1 xanthinuria","type":"related"},{"name":"xanthine dehydrogenase deficiency","type":"broad"},{"name":"xanthine oxidase deficiency","type":"broad"},{"name":"xanthine oxidoreductase deficiency","type":"broad"},{"name":"xanthinuria type 1","type":"exact"},{"name":"xanthinuria type I","type":"exact"},{"name":"xanthinuria, type 1","type":"exact"},{"name":"xanthinuria, type I","type":"exact"}],"termid":"MONDO:0010209","xrefs":{"Monarch":{"xref_id":"0010209"}}}


id: PBO:0030161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylinositol_level","termid":"PBO:0030161"}


id: PBO:0079843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog B","termid":"PBO:0079843"}


id: FYPO:0007357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Smp focus.","definition_xrefs":["PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Smp focus absent from cell","synonyms":[{"name":"Sme2 focus absent from cell","type":"narrow"},{"name":"Smp dot complex absent from cell","type":"exact"},{"name":"Smp focus absent from cell during meiotic cell cycle","type":"exact"},{"name":"absence of Smp focus","type":"exact"},{"name":"absent Smp focus","type":"exact"}],"termid":"FYPO:0007357"}


id: PBO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Fsv1","termid":"PBO:0000900"}


id: PR:O14344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inosine-5'-monophosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-5'-monophosphate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.14c","secondary_identifiers":["UniProtKB:O14344"],"synonyms":[{"name":"IMP dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IMPDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2F12.14c","type":"related"},{"name":"Spom972h-guaB","type":"exact"}],"termid":"PR:O14344"}


id: FYECO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experimental conditions included the absence of a chemical.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000010 absence of chemical (obsolete FYECO:0000010)","termid":"FYECO:0000010"}


id: PBO:0038757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 2","termid":"PBO:0038757"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0083025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; the YER186W-A was removed because it does not begin with a start codon or end with a stop codon, and has an in-frame internal stop codon (see the Locus History for more details)","termid":"PBO:0083025"}


id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 47 (pseudogene)","termid":"PBO:0045635"}


id: PBO:0065547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 1","termid":"PBO:0065547"}


id: PBO:0058197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4490","termid":"PBO:0058197"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: GO:0043903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biological process involved in symbiotic interaction","synonyms":[{"name":"regulation of interspecies interactions between organisms","type":"broad"},{"name":"regulation of symbiosis, encompassing mutualism through parasitism","type":"related"},{"name":"regulation of symbiotic process","type":"exact"}],"termid":"GO:0043903"}


id: PBO:0073048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 6","termid":"PBO:0073048"}


id: MONDO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mu chain disease (obsolete MONDO:0000658)","termid":"MONDO:0000658","xrefs":{"Monarch":{"xref_id":"0000658"}}}


id: PBO:0090484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase","termid":"PBO:0090484"}


id: MONDO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial spontaneous pneumothorax is a rare, genetic pulmonary disease characterized by the uni- or bilateral accumulation of air in the pleural cavity in persons with a positive family history and no underlying lung disease or previous chest trauma. Patients typically present dyspnea associated with acute onset of sharp and steady pleutiric chest pain of variable severity (which resolves within 24h even though pneumothorax is still present). Reflex tachycardia and/or respiratory or circulatory compromise may be observed. Other syndromes (e.g. Birt-Hogg-Dube, Marfan or Ehlers-Danlos syndromes) may be associated.","definition_xrefs":["Orphanet:2903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial spontaneous pneumothorax","secondary_identifiers":["DOID:0080218","SCTID:715219001","OMIM:173600","MESH:C566795","UMLS:C1868193","GARD:4997","icd11.foundation:319022944","MEDGEN:357445"],"synonyms":[{"name":"Psp","type":"related"},{"name":"pneumothorax, primary spontaneous","type":"related"},{"name":"primary spontaneous pneumothorax","type":"related"},{"name":"spontaneous pneumothorax","type":"related"}],"termid":"MONDO:0008259","xrefs":{"Monarch":{"xref_id":"0008259"}}}


id: PBO:0113548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD-repeat protein involved in Ub-mediated proteolysis; K48-, K29-specific Ub chain binding protein involved in Ub homeostasis; substrate-recruiting adaptor for Cdc48p in mitochondria-associated degradation; inhibits degradation of Ufd2p-dependent substrates; facilitates proteolysis of Cse4p, a centromeric H3-like protein; required for ribophagy; promotes NHEJ in postdiauxic/stationary phase; protein increases in abundance and relocalizes from nucleus to nuclear periphery upon replication stress","termid":"PBO:0113548"}


id: MONDO:0011843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TCAP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of telethonin","termid":"MONDO:0016192"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 25","secondary_identifiers":["MESH:C564388","DOID:0110328","OMIM:607487","UMLS:C4225408","MEDGEN:895360"],"synonyms":[{"name":"CMH25","type":"exact"},{"name":"TCAP hypertrophic cardiomyopathy","type":"exact"},{"name":"Tcap hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 25","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 25","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 25","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 25","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TCAP","type":"exact"},{"name":"hypertrophic cardiomyopathy type 25","type":"exact"}],"termid":"MONDO:0011843","xrefs":{"Monarch":{"xref_id":"0011843"}}}


id: GO:1901161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound catabolic process","synonyms":[{"name":"primary amino compound breakdown","type":"exact"},{"name":"primary amino compound catabolism","type":"exact"},{"name":"primary amino compound degradation","type":"exact"}],"termid":"GO:1901161"}


id: MONDO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Yemenite deaf-blind hypopigmentation syndrome is an exceedingly rare genetic disorder characterized by cutaneous pigmentation anomalies, ocular disorders and hearing loss.","definition_xrefs":["Orphanet:3214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deaf blind hypopigmentation syndrome, Yemenite type","secondary_identifiers":["OMIM:601706","UMLS:C1866425","icd11.foundation:2090985024","GARD:5535","MESH:C536771","MEDGEN:355712","SCTID:721084001"],"synonyms":[{"name":"Warburg Thomsen syndrome","type":"related"},{"name":"Warburg-Thomsen syndrome","type":"exact"},{"name":"Yemenite (Warburg) deaf-blind hypopigmentation syndrome","type":"related"},{"name":"Yemenite deaf-blind hypopigmentation syndrome","type":"exact"}],"termid":"MONDO:0011133","xrefs":{"Monarch":{"xref_id":"0011133"}}}


id: PBO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 26","termid":"PBO:0071523"}


id: GO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate + H2O = dolichol + phosphate.","definition_xrefs":["EC:3.1.3.51","MetaCyc:DOLICHYL-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphatase activity","secondary_identifiers":["RHEA:13797"],"synonyms":[{"name":"Dol-P phosphatase activity","type":"related"},{"name":"Dol-P-P phosphohydrolase activity","type":"exact"},{"name":"dolichol monophosphatase activity","type":"related"},{"name":"dolichol phosphatase activity","type":"related"},{"name":"dolichol phosphate phosphatase activity","type":"related"},{"name":"dolichyl monophosphate phosphatase activity","type":"related"},{"name":"dolichyl phosphate phosphatase activity","type":"related"},{"name":"dolichyl pyrophosphate phosphatase activity","type":"exact"},{"name":"dolichyl-phosphate phosphohydrolase activity","type":"related"},{"name":"polyisoprenyl phosphate phosphatase activity","type":"related"},{"name":"polyprenylphosphate phosphatase activity","type":"related"}],"termid":"GO:0047873"}


id: MONDO:0008134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"One of the most common forms of hereditary optic neuropathy characterized by progressive bilateral visual loss during the first decade of life, associated with optic disk pallor, visual field and color vision defects.","definition_xrefs":["Orphanet:98673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0004069","MONDO:0005328","MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant optic atrophy, classic form","secondary_identifiers":["MEDGEN:137902","SCTID:717336005","OMIM:165500","DOID:0111441","GARD:9890","UMLS:C0338508"],"synonyms":[{"name":"Kjer optic atrophy","type":"exact"},{"name":"Kjer-type optic atrophy","type":"related"},{"name":"OAK","type":"related"},{"name":"OPA1","type":"related"},{"name":"autosomal dominant optic atrophy, Kjer type","type":"exact"},{"name":"optic atrophy 1","type":"related"},{"name":"optic atrophy type 1","type":"exact"},{"name":"optic atrophy, Kjer type","type":"related"},{"name":"optic atrophy, juvenile","type":"related"}],"termid":"MONDO:0008134","xrefs":{"Monarch":{"xref_id":"0008134"}}}


id: MONDO:0006214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonencapsulated variant of papillary carcinoma of the thyroid gland characterized by the predominance of follicular structures. The malignant follicular cells display the nuclear features that characterize the papillary adenocarcinomas of the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"follicular variant thyroid gland papillary carcinoma","secondary_identifiers":["MEDGEN:811427","NCIT:C126594","UMLS:C3714651","EFO:1000261"],"synonyms":[{"name":"FVPTC","type":"exact"}],"termid":"MONDO:0006214","xrefs":{"Monarch":{"xref_id":"0006214"}}}


id: MONDO:0008790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia, nonspherocytic hemolytic","termid":"MONDO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic, possibly due to defect in porphyrin metabolism","secondary_identifiers":["UMLS:C1859785","OMIM:206400","MESH:C565952","MEDGEN:395345"],"synonyms":[{"name":"anemia, nonspherocytic hemolytic, possibly due to defect in porphyrin metabolism","type":"exact"}],"termid":"MONDO:0008790","xrefs":{"Monarch":{"xref_id":"0008790"}}}


id: PBO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1 pseudogene 1","termid":"PBO:0048438"}


id: MONDO:0800329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 3a","secondary_identifiers":["UMLS:C2751756","MEDGEN:442807"],"synonyms":[{"name":"FEB3A","type":"exact"}],"termid":"MONDO:0800329","xrefs":{"Monarch":{"xref_id":"0800329"}}}


id: SO:0001406
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified arginine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_arginine","secondary_identifiers":["MOD:00902"],"synonyms":[{"name":"ModArg","type":"exact"},{"name":"modified L arginine","type":"exact"},{"name":"modified L-arginine","type":"exact"}],"termid":"SO:0001406"}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role published","termid":"PBO:0000001"}


id: GO:0005216
data:
  {"annotated_genes":["SJAG_04122","SJAG_02564","SJAG_MIT37","SJAG_00438","SJAG_03114","SJAG_00985","SJAG_03925","SJAG_02532","SJAG_05204","SJAG_00048","SJAG_07003","SJAG_03895","SJAG_01168","SJAG_00133","SJAG_02598","SJAG_MIT15","SJAG_02105","SJAG_00836","SJAG_05229","SJAG_04668","SJAG_MIT09","SJAG_01090","SJAG_02877","SJAG_04471","SJAG_02019","SJAG_05342","SJAG_02322","SJAG_00915","SJAG_00542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74178,114036,79036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[74796,81619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[72173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[76215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[103295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[95178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[118700,71642,93348,101345,79917,118694,81105,94338,107367,79593,71935,58016,92757,118707,107459,74498,77588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[99141,113521,91881,91823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[73444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a monoatomic ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).","definition_xrefs":["ISBN:0815340729","GOC:pr","GOC:mtg_transport","GOC:cy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ion channel activity","type":"broad"}],"termid":"GO:0005216","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: PBO:0052108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNAB1 antisense RNA 2","termid":"PBO:0052108"}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00509","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: PBO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasorin","termid":"PBO:0080141"}


id: PBO:0073653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 1","termid":"PBO:0073653"}


id: FYPO:0003370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium fluoride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on sodium fluoride","synonyms":[{"name":"normal cell population growth in presence of sodium fluoride","type":"exact"},{"name":"normal cell population growth on sodium fluoride","type":"exact"},{"name":"normal cellular response to sodium fluoride","type":"related"},{"name":"normal growth on NaF","type":"exact"},{"name":"normal vegetative cell population growth on sodium fluoride","type":"exact"}],"termid":"FYPO:0003370"}


id: PR:Q9HGL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02386","PANTHER:PTHR12945:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.08","secondary_identifiers":["UniProtKB:Q9HGL4"],"synonyms":[{"name":"Spom972h-TRMT6","type":"exact"},{"name":"general control non-derepressible protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein gcd10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)-methyltransferase subunit trm6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1A58)MTase subunit trm6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL4"}


id: PBO:0049582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.7 histone (putative)","termid":"PBO:0049582"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: GO:0031508
data:
  {"annotated_genes":["SJAG_03689","SJAG_00058","SJAG_01540","SJAG_00142","SJAG_00934","SJAG_00961","SJAG_03982","SJAG_02594","SJAG_04030","SJAG_01601","SJAG_04942","SJAG_03193","SJAG_04253","SJAG_04574","SJAG_02778","SJAG_00414","SJAG_03916","SJAG_03543","SJAG_03128","SJAG_02409","SJAG_00302","SJAG_03997","SJAG_02576","SJAG_01675","SJAG_03042","SJAG_01075","SJAG_03680","SJAG_04141","SJAG_01579","SJAG_00087","SJAG_04061","SJAG_00756","SJAG_03624","SJAG_00335","SJAG_04186","SJAG_03844","SJAG_01008","SJAG_02119","SJAG_03356","SJAG_02621","SJAG_02725","SJAG_04039","SJAG_02846","SJAG_02401","SJAG_01599","SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61247,64601,74174,89676,91549,92300,92919,93559,93827,97759,102309,103620,103721,107719,110853,111692,112212,112213,112884,113584,114021],"is_not":false,"summary":null,"term":"GO:0031508"},{"annotations":[90655],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090053"},{"annotations":[99819,96690],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[88291,110791,114167,110229,98637,99077,113906,88234,115026,94834,115588,106103,118447,117308,117715,117597,93572,90746,96237,110062,111797,113264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The compaction of chromatin located adjacent to the CENP-A rich centromere 'central core' and characterized by methylation of histone H3K9, into heterochromatin, resulting in the repression of transcription at pericentric DNA.","definition_xrefs":["GOC:mah","PMID:20206496","PMID:14612388","PMID:22729156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00142":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00341":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01075":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01675":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02576":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03543":null,"SJAG_03624":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04253":null,"SJAG_04574":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0030702","GO:1990141"],"synonyms":[{"name":"centric heterochromatin formation","type":"related"},{"name":"centromere chromatin silencing","type":"exact"},{"name":"centromeric heterochromatin biosynthesis","type":"exact"},{"name":"centromeric heterochromatin formation","type":"exact"},{"name":"centromeric silencing","type":"exact"},{"name":"chromatin silencing at centromere","type":"exact"},{"name":"chromatin silencing at centromere outer repeat region","type":"narrow"},{"name":"chromatin silencing at pericentric region","type":"related"},{"name":"heterochromatic silencing at centromere","type":"exact"},{"name":"pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0031508","terms_by_termid":{"GO:0031508":null,"GO:0090052":null,"GO:0090053":null,"GO:0140727":null}}


id: PBO:0065268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR29 antisense RNA 1","termid":"PBO:0065268"}


id: PBO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_circular_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033745"}


id: PBO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29","termid":"PBO:0090046"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: FYPO:0007237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency at which two double-strand breaks (DSBs) form close to each other during meiosis I is increased.","definition_xrefs":["PomBase:mah","PMID:30217891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic DNA double-strand break formation near existing double-strand break","synonyms":[{"name":"decreased DSB interference","type":"exact"},{"name":"decreased distance between meiotic DSBs","type":"exact"}],"termid":"FYPO:0007237"}


id: GO:0052769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the glycosidic cleavage of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residue from sulfomucin, a sulfated mucin derivative.","definition_xrefs":["PMID:15716424","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-6-sulfate-N-acetylglucosaminidase activity","synonyms":[{"name":"beta-6-SO3-N-acetylglucosaminidase activity","type":"broad"},{"name":"exosulfoglycosidase activity","type":"broad"},{"name":"sulfoglycosidase activity","type":"broad"},{"name":"sulfomucin beta-6-sulfate-N-acetylglucosaminidase activity","type":"exact"}],"termid":"GO:0052769"}


id: GO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a Gram-positive bacterium.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive bacterial cell surface binding (obsolete GO:0051637)","synonyms":[{"name":"Gram-positive bacterial binding","type":"exact"},{"name":"Gram-positive bacterial cell surface binding","type":"exact"},{"name":"Gram-positive bacterium binding","type":"exact"},{"name":"Gram-positive bacterium cell surface binding","type":"exact"},{"name":"binding to Gram-positive bacterium","type":"exact"}],"termid":"GO:0051637"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: SO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of six or seven consecutive residues that contains two H-bonds.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop","secondary_identifiers":["BS:00226"],"synonyms":[{"name":"paperclip","type":"related"},{"name":"paperclip loop","type":"related"},{"name":"schellmann loop","type":"exact"}],"termid":"SO:0001123"}


id: GO:0009601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from an insect is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of insect","synonyms":[{"name":"perception of insect","type":"related"}],"termid":"GO:0009601"}


id: MONDO:0017202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of endophthalmitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purulent endophthalmitis","termid":"MONDO:0004863"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute endophthalmitis","secondary_identifiers":["ICD9:360.01","MedDRA:10000730","MEDGEN:509652","SCTID:1493002","DOID:11752","UMLS:C0154773","Orphanet:279888","GARD:21059"],"synonyms":[{"name":"endophthalmitis, acute","type":"exact"}],"termid":"MONDO:0017202","xrefs":{"Monarch":{"xref_id":"0017202"}}}


id: GO:0030639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"polyketide biosynthetic process","synonyms":[{"name":"polyketide anabolism","type":"exact"},{"name":"polyketide biosynthesis","type":"exact"},{"name":"polyketide formation","type":"exact"},{"name":"polyketide synthesis","type":"exact"}],"termid":"GO:0030639"}


id: PBO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 42","termid":"PBO:0050264"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: GO:0098563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of synaptic vesicle membrane (obsolete GO:0098563)","termid":"GO:0098563"}


id: GO:0052528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism increases the frequency, rate or extent of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete upregulation by organism of symbiont programmed cell death (obsolete GO:0052528)","synonyms":[{"name":"enhancement of symbiont programmed cell death by organism","type":"exact"},{"name":"upregulation by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052528"}


id: RO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}


id: SO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters; Positioned from +28 to +32 with respect to the TSS (+1). Experimental results suggest that the DPE acts in conjunction with the INR_motif to provide a binding site for TFIID in the absence of a TATA box to mediate transcription of TATA-less promoters. Consensus sequence (A|G)G(A|T)(C|T)(G|A|C).","definition_xrefs":["PMID:16858867","PMID:12651739","PMID:12515390","PMID:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPE_motif","synonyms":[{"name":"CRWMGCGWKCGCTTS","type":"narrow"},{"name":"DPE motif","type":"exact"},{"name":"downstream core promoter element","type":"exact"}],"termid":"SO:0000015"}


id: MONDO:0013877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive metabolic disorder characterized by delayed psychomotor development and lactic acidosis with a normal lactate/pyruvate ratio resulting from impaired mitochondrial pyruvate oxidation.","definition_xrefs":["PMID:22628558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pyruvate metabolism disorder","termid":"MONDO:0016789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial pyruvate carrier deficiency","secondary_identifiers":["GARD:17771","UMLS:C3553607","DOID:0080363","MEDGEN:766521","Orphanet:447784","OMIM:614741"],"synonyms":[{"name":"MPYCD","type":"related"},{"name":"mitochondrial pyruvate carrier deficiency","type":"exact"}],"termid":"MONDO:0013877","xrefs":{"Monarch":{"xref_id":"0013877"}}}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:26554819","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: PBO:0004460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43 (predicted)","termid":"PBO:0004460"}


id: PBO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 8","termid":"PBO:0044439"}


id: MONDO:1010477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, chimpanzee","secondary_identifiers":["OMIA:000878-9598"],"termid":"MONDO:1010477","xrefs":{"Monarch":{"xref_id":"1010477"}}}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: GO:1902227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["PMID:16705167","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"down regulation of M-CSF signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"down-regulation of M-CSF signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"downregulation of M-CSF signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"inhibition of M-CSF signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"inhibition of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"negative regulation of M-CSF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902227"}


id: PBO:0053797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1052","termid":"PBO:0053797"}


id: GO:0016346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140013","GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiotic chromosome movement towards spindle pole","synonyms":[{"name":"chromosome movement towards spindle pole during male meiosis","type":"exact"},{"name":"male meiotic chromosome movement","type":"broad"},{"name":"male meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016346"}


id: PBO:0116307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase Aro4","termid":"PBO:0116307"}


id: FYPO:0008004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a site of mechanical stress on the cell surface where it is normally found.","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to site of mechanical stress","termid":"FYPO:0008004"}


id: PBO:0115007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein involved in respiratory complex assembly Cmc2","termid":"PBO:0115007"}


id: MONDO:0009758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the GRM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"GRM6-related retinopathy","termid":"MONDO:0800397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1B","secondary_identifiers":["MEDGEN:342484","UMLS:C1850362","DOID:0110865","GARD:15212","OMIM:257270"],"synonyms":[{"name":"CSNB, complete, autosomal recessive","type":"related"},{"name":"CSNB1B","type":"exact"},{"name":"GRM6 congenital stationary night blindness","type":"exact"},{"name":"autosomal recessive complete congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1B","type":"exact"},{"name":"congenital stationary night blindness 1B autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in GRM6","type":"exact"},{"name":"congenital stationary night blindness type 1B","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1B, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, complete, autosomal recessive","type":"related"},{"name":"night blindness, congenital stationary, type 1B","type":"related"}],"termid":"MONDO:0009758","xrefs":{"Monarch":{"xref_id":"0009758"}}}


id: PBO:0057463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 582","termid":"PBO:0057463"}


id: PBO:0079104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC complex subunit 2","termid":"PBO:0079104"}


id: GO:0048269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric enzyme complex composed of variable numbers of catalytic alpha subunits, and noncatalytic beta subunits. The beta subunits are believed to have a regulatory function. The enzyme complex catalyzes the synthesis of S-adenosylmethionine (AdoMet), which is the major methyl group donor, participating in the methylation of proteins, DNA, RNA, phospholipids, and other small molecules.","definition_xrefs":["GOC:jid","PMID:10644686","PMID:25075345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methionine adenosyltransferase complex","synonyms":[{"name":"MAT complex","type":"exact"}],"termid":"GO:0048269"}


id: PBO:0089781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery involved in ribosome biogenesis protein Lto1","termid":"PBO:0089781"}


id: PBO:0063001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestagen associated endometrial protein pseudogene 1","termid":"PBO:0063001"}


id: PBO:0080637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 86","termid":"PBO:0080637"}


id: GO:0097415
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion similar to a classical Lewy body but lacking a halo of protein fibrils.","definition_xrefs":["NIF_Subcellular:sao4040591221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cortical Lewy body","termid":"GO:0097415"}


id: GO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"hemoglobin binding","synonyms":[{"name":"globin binding","type":"broad"},{"name":"haemoglobin binding","type":"exact"}],"termid":"GO:0030492"}


id: GO:0033896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of poly(U) or poly(C) to fragments terminated by 3'-hydroxy and 5'-phosphate groups.","definition_xrefs":["EC:3.1.26.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"ribonuclease IX activity","secondary_identifiers":["MetaCyc:3.1.26.10-RXN"],"synonyms":[{"name":"poly(U)- and poly(C)-specific endoribonuclease activity","type":"related"}],"termid":"GO:0033896"}


id: PBO:0056890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1 interacting protein 1","termid":"PBO:0056890"}


id: MONDO:0003955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually solitary, well circumscribed multicystic neoplasm that arises from the breast and typically affects young females. The cysts are lined by papillary proliferations that contain epithelial and myoepithelial layers. In a minority of cases, atypia may be present.","definition_xrefs":["NCIT:C9503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papillomatosis","termid":"MONDO:0004253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile breast papillomatosis","secondary_identifiers":["DOID:6641","MEDGEN:233588","UMLS:C1334303","SCTID:708518001"],"synonyms":[{"name":"Swiss cheese disease","type":"exact"},{"name":"breast juvenile papillomatosis","type":"related"},{"name":"juvenile breast papillomatosis","type":"exact"},{"name":"juvenile papillomatosis of breast","type":"exact"},{"name":"juvenile papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0003955","xrefs":{"Monarch":{"xref_id":"0003955"}}}


id: FYPO:0007306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H4K12 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007306"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: GO:0015138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fumarate from one side of a membrane to the other. Fumarate is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"fumarate transmembrane transporter activity","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015138"}


id: PBO:0087088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6A; N-terminally acetylated; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6A has a paralog, RPL6B, that arose from the whole genome duplication","termid":"PBO:0087088"}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: GO:0006795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphorus utilization","termid":"GO:0006795"}


id: PBO:0040971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 42","termid":"PBO:0040971"}


id: PBO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5","termid":"PBO:0060223"}


id: PR:O42948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C16H5.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.13","synonyms":[{"name":"Spom972h-SPBC16H5.13","type":"exact"}],"termid":"PR:O42948"}


id: PBO:0063401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like 2","termid":"PBO:0063401"}


id: GO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals.","definition_xrefs":["GOC:mah","GOC:jsg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"L-methylmalonyl-CoA metabolic process","synonyms":[{"name":"L-methylmalonyl-CoA metabolism","type":"exact"}],"termid":"GO:0046491"}


id: PBO:0045026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRC3 antisense RNA 1","termid":"PBO:0045026"}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: PBO:0113221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; interacts with the UBA domain of mRNA export factor Mex67p; participates in the export of Msn2/4 stress-dependent mRNAs; partially redundant function with paralog PES4 in the steady-state expression, translational timing and localization of a subset of Ndt80-dependent mRNAs that are protected until translated near the end of meiosis II; redundant role with PES4 in sporulation; shuttles between the nucleus and cytoplasm, localizes to stress granules and the prospore membrane","termid":"PBO:0113221"}


id: PBO:0074433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 33","termid":"PBO:0074433"}


id: PATO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001067 absolute strain (obsolete PATO:0001067)","termid":"PATO:0001067"}


id: PBO:0044436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily B member 1","termid":"PBO:0044436"}


id: PBO:0091479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane fatty acid alpha-oxygenase Mpo1","termid":"PBO:0091479"}


id: PBO:0088531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase Yfh7","termid":"PBO:0088531"}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: PBO:0016949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam5","termid":"PBO:0016949"}


id: MONDO:0003734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system teratoma","termid":"MONDO:0003731"},{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system immature teratoma","secondary_identifiers":["NCIT:C27401","UMLS:C1332193","DOID:6018","MEDGEN:231036"],"synonyms":[{"name":"adult central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003734","xrefs":{"Monarch":{"xref_id":"0003734"}}}


id: PBO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 2","termid":"PBO:0046694"}


id: PBO:0029285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleolus","termid":"PBO:0029285"}


id: MONDO:0032621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 16","secondary_identifiers":["DOID:0112096","GARD:16324","MEDGEN:1648351","UMLS:C4748785","OMIM:618238"],"synonyms":[{"name":"MC1DN16","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 16","type":"related"}],"termid":"MONDO:0032621","xrefs":{"Monarch":{"xref_id":"0032621"}}}


id: FYPO:0002234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular sterol ester level","synonyms":[{"name":"decreased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"decreased level of sterol ester in cell","type":"exact"},{"name":"decreased sterol ester accumulation","type":"related"},{"name":"reduced cellular sterol ester level","type":"exact"},{"name":"reduced level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002234"}


id: PBO:0064260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A8","termid":"PBO:0064260"}


id: PBO:0059643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 9","termid":"PBO:0059643"}


id: MONDO:0859310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 19","secondary_identifiers":["DOID:0060960","MEDGEN:1824021","OMIM:620107","UMLS:C5774248"],"termid":"MONDO:0859310","xrefs":{"Monarch":{"xref_id":"0859310"}}}


id: PBO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen C domain containing 1","termid":"PBO:0047614"}


id: PBO:0054197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1572","termid":"PBO:0054197"}


id: MONDO:0024282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive malignant neoplasm that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin and may resemble the epithelial cells of the endocervix or gastrointestinal tract. It includes mucinous adenocarcinoma and mucinous adenocarcinofibroma.","definition_xrefs":["NCIT:C40033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous ovarian cancer","secondary_identifiers":["UMLS:C1518233","MEDGEN:274767","ONCOTREE:MOV"],"synonyms":[{"name":"malignant ovarian mucinous neoplasm","type":"exact"},{"name":"malignant ovarian mucinous tumor","type":"exact"},{"name":"malignant ovarian mucinous tumour","type":"exact"},{"name":"ovarian mucinous neoplasm, malignant","type":"exact"}],"termid":"MONDO:0024282","xrefs":{"Monarch":{"xref_id":"0024282"}}}


id: PBO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2 pseudogene 1","termid":"PBO:0046137"}


id: PBO:0067501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 638, pseudogene","termid":"PBO:0067501"}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: GO:0018953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["UM-BBD_pathwayID:pcy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"p-cymene metabolic process","synonyms":[{"name":"p-cymene metabolism","type":"exact"}],"termid":"GO:0018953"}


id: MONDO:0023609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"le Marec-Bracq-Picaud syndrome","secondary_identifiers":["MESH:C536997","UMLS:C2931385","MEDGEN:444043"],"synonyms":[{"name":"complex malformation syndrome with brachymesomelia","type":"related"}],"termid":"MONDO:0023609","xrefs":{"Monarch":{"xref_id":"0023609"}}}


id: MONDO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized collection of pus in the tissues that enclose the root of a tooth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative periapical periodontitis","secondary_identifiers":["DOID:2562","EFO:1001202","NCIT:C34913","UMLS:C0031024","MEDGEN:10652","MESH:D010482"],"synonyms":[{"name":"apical abscess","type":"exact"},{"name":"dentoalveolar abscess","type":"exact"},{"name":"periapical abscess","type":"exact"},{"name":"periapical dental abscess","type":"exact"},{"name":"suppurative apical periodontitis","type":"exact"}],"termid":"MONDO:0006989","xrefs":{"Monarch":{"xref_id":"0006989"}}}


id: GO:0150168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K4 acetylation (obsolete GO:0150168)","termid":"GO:0150168"}


id: PBO:0039506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 4","termid":"PBO:0039506"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: MONDO:0007638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosidase regulator","secondary_identifiers":["OMIM:136830","UMLS:C1850954","MEDGEN:342631"],"synonyms":[{"name":"Alpha-L-fucosidase regulator","type":"related"},{"name":"fucosidase regulator","type":"exact"}],"termid":"MONDO:0007638","xrefs":{"Monarch":{"xref_id":"0007638"}}}


id: GO:0000779
data:
  {"annotated_genes":["SJAG_03217","SJAG_00646","SJAG_03681","SJAG_03161","SJAG_03418","SJAG_03916","SJAG_01601","SJAG_03683","SJAG_04581","SJAG_04745","SJAG_01928","SJAG_02624","SJAG_01831","SJAG_01224","SJAG_02451","SJAG_00594","SJAG_01775","SJAG_01546","SJAG_03926","SJAG_00684","SJAG_05321","SJAG_00794","SJAG_01228","SJAG_01211","SJAG_04038","SJAG_03353","SJAG_00307","SJAG_04841","SJAG_05220","SJAG_04259","SJAG_04177","SJAG_00350","SJAG_05266","SJAG_02651","SJAG_00666","SJAG_03540","SJAG_01371","SJAG_03989","SJAG_04255","SJAG_03619","SJAG_05019","SJAG_04884","SJAG_02513","SJAG_01067","SJAG_00082","SJAG_01805","SJAG_05273","SJAG_01082","SJAG_02814","SJAG_01278","SJAG_02664","SJAG_02731","SJAG_04126","SJAG_03327","SJAG_00918","SJAG_04623","SJAG_01297","SJAG_00207","SJAG_01330","SJAG_01613","SJAG_04699","SJAG_04076","SJAG_03220","SJAG_02761","SJAG_04412","SJAG_00697","SJAG_03048","SJAG_04040","SJAG_00418","SJAG_05319","SJAG_02346","SJAG_04696","SJAG_01837","SJAG_03437","SJAG_02336","SJAG_03832","SJAG_01836","SJAG_02807","SJAG_03867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87256,89523,90381,90736,98618,101589,107287,107334,107370,116461],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[100034,76727,63213,64554,116520,69839,60973,64480,78316,81447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[109881,114088,112810,116264,115497,98772,111764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[111629,112971,77149,89447,101873,74698,105016,88818,81425,118773,119096,98716,104406,78125,94253,66075,72307,99649,75247,103413,118480,90243,81660,96773,104077,107805,108780,114679,111473,96266,81229],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000776"},{"annotations":[100857,113372],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[60716,71628,76090,81680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[113731,97409,105089,62494,105913,112701,113142,93777,89150,94183,89502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[70692,111262],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[78919,77650,77488,76659],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[118286,114093,99891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.","definition_xrefs":["GOC:kmv","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, centromeric region","termid":"GO:0000775"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":79,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00594":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01831":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03418":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04038":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"condensed chromosome, centromeric region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0000780"],"synonyms":[{"name":"condensed chromosome, centric region","type":"exact"},{"name":"condensed chromosome, centromere","type":"related"},{"name":"condensed chromosome, pericentric region","type":"related"},{"name":"condensed nuclear chromosome, centromeric region","type":"narrow"}],"termid":"GO:0000779","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000779":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: GO:0070411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an inhibitory SMAD signaling protein.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:19114992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD binding","termid":"GO:0046332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"I-SMAD binding","termid":"GO:0070411"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: GO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"}


id: MONDO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection that affects the lungs and is caused by Mycobacterium tuberculosis. Most patients with tuberculosis do not have symptoms (latent tuberculosis) and are not contagious. When signs and symptoms occur (active tuberculosis), patients become contagious. The signs and symptoms include chronic cough with blood-tinged sputum, night sweats, fever, fatigue, and weight loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary tuberculosis","secondary_identifiers":["SCTID:154283005","UMLS:C0041327","DOID:2957","ICD9:011.81","ICD9:011.90","EFO:1000049","ICD9:011.16","ICD9:011.84","NCIT:C26899","ICD9:011.92","ICD9:011.80","ICD9:011.9","ICD9:011","ICD9:011.86","ICD9:011.96","ICD9:011.85","MEDGEN:11947","MESH:D014397"],"synonyms":[{"name":"lung TB","type":"exact"},{"name":"lung tuberculosis","type":"exact"},{"name":"pulmonary TB","type":"exact"}],"termid":"MONDO:0006052","xrefs":{"Monarch":{"xref_id":"0006052"}}}


id: PBO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIM1 divergent transcript","termid":"PBO:0043892"}


id: GO:0019029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.","definition_xrefs":["ISBN:071673706X","VZ:885","UniProtKB-KW:KW-1139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"helical viral capsid","termid":"GO:0019029"}


id: PBO:0031385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0031385"}


id: MONDO:1012704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal and skeletal dysplasia that occurs in dogs due to a mutation in the COL9A3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal and skeletal dysplasia, dog","termid":"MONDO:1012317"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculoskeletal dysplasia, COL9A3-related, dog","secondary_identifiers":["OMIA:001522-9615"],"synonyms":[{"name":"oculoskeletal dysplasia 1, dog","type":"related"}],"termid":"MONDO:1012704","xrefs":{"Monarch":{"xref_id":"1012704"}}}


id: GO:0097284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatocyte, the main structural component of the liver.","definition_xrefs":["CL:0000182","GOC:jc","GOC:mtg_apoptosis","PMID:15856020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte apoptotic process","synonyms":[{"name":"hepatocyte apoptosis","type":"narrow"}],"termid":"GO:0097284"}


id: PBO:0052120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 3","termid":"PBO:0052120"}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["GOC:tb","PMID:16361392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["ICDO:9840/3","SCTID:93451002","DOID:0080780","GARD:9620","icd11.foundation:538743484","EFO:0000218","icd11.foundation:631263622","ICD9:205.80","ICD9:207.00","MESH:D004915","NANDO:2200010","Orphanet:318","UMLS:C0023440","MEDGEN:7316"],"synonyms":[{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: GO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10977869","GOC:mtg_cardiac_conduct_nov11","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endothelin receptor signaling pathway","synonyms":[{"name":"endothelin signaling pathway","type":"related"}],"termid":"GO:0086100"}


id: MONDO:0007954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete May-Hegglin anomaly (obsolete MONDO:0007954)","secondary_identifiers":["NANDO:1200893","NANDO:2200127","NANDO:2200654","NANDO:2100193"],"termid":"MONDO:0007954","xrefs":{"Monarch":{"xref_id":"0007954"}}}


id: MONDO:0011872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Griscelli syndrome type 2 (GS2) is a rare, inherited condition that affects the skin, hair, and immune system. People with GS2 have unusually light skin and silver-colored hair. They are also prone to recurrent infections and develop an immune condition called hemophagocytic lymphohistiocytosis (HLH). HLH can damage organs and tissues throughout the body, causing life-threatening complications. GS2 is caused by changes (mutations) in the RAB27A gene and is inherited in an autosomal recessive manner. The only current treatment that can extend survival is stem cell transplantation (a bone marrow transplant). Untreated, most children with GS2 do not survive past early childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"Griscelli syndrome","termid":"MONDO:0018306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Griscelli syndrome type 2","secondary_identifiers":["DOID:0060833","icd11.foundation:1836541365","MEDGEN:357030","OMIM:607624","NANDO:2200732","NCIT:C111814","UMLS:C1868679","ICD10CM:E70.3","Orphanet:79477","MESH:C537302","GARD:4483"],"synonyms":[{"name":"GS2","type":"exact"},{"name":"Griscelli disease type 2","type":"related"},{"name":"Griscelli syndrome type 2","type":"exact"},{"name":"Griscelli syndrome with hemophagocytic syndrome","type":"exact"},{"name":"Griscelli syndrome, type 2","type":"related"},{"name":"Griscelli-PruniC)ras syndrome type 2","type":"exact"},{"name":"Griscelli-Pruniéras syndrome type 2","type":"exact"},{"name":"Griscelli-Pruni��ras syndrome type 2","type":"exact"},{"name":"PAID syndrome","type":"exact"},{"name":"Paid syndrome","type":"related"},{"name":"hypopigmentation-immunodeficiency with or without neurologic impairment syndrome","type":"exact"},{"name":"partial albinism and immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0011872","xrefs":{"Monarch":{"xref_id":"0011872"}}}


id: PBO:0084888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial threonyl-tRNA synthetase; aminoacylates both the canonical threonine tRNA tT(UGU)Q1 and the unusual threonine tRNA tT(UAG)Q2 in vitro; lacks a typical editing domain, but has pre-transfer editing activity stimulated by the unusual tRNA-Thr","termid":"PBO:0084888"}


id: MONDO:0032765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 22","secondary_identifiers":["MEDGEN:1673822","UMLS:C5193111","OMIM:618462"],"synonyms":[{"name":"BDPLT22","type":"related"},{"name":"BLEEDING DISORDER, PLATELET-TYPE, 22","type":"related"}],"termid":"MONDO:0032765","xrefs":{"Monarch":{"xref_id":"0032765"}}}


id: _global:guides
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guides","termid":"_global:guides"}


id: FYPO:0004647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to copper ion","synonyms":[{"name":"increased RNA accumulation during cellular response to copper ion","type":"related"},{"name":"increased RNA level during cellular response to copper","type":"exact"},{"name":"increased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"increased transcript level during cellular response to copper ion","type":"exact"}],"termid":"FYPO:0004647"}


id: PBO:0039648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit gamma 2","termid":"PBO:0039648"}


id: PBO:0080901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1","termid":"PBO:0080901"}


id: PBO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previusly annotated as SPBTRNAASP.03","termid":"PBO:0008726"}


id: GO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within the xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of xylem in other organism involved in symbiotic interaction (obsolete GO:0052497)","synonyms":[{"name":"occlusion by organism of xylem in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052497"}


id: GO:0004386
data:
  {"annotated_genes":["SJAG_04669","SJAG_04118","SJAG_02686","SJAG_03898","SJAG_03923","SJAG_05173","SJAG_02690","SJAG_04480","SJAG_00798","SJAG_05353","SJAG_03077","SJAG_03730","SJAG_01762","SJAG_01315","SJAG_04081","SJAG_03157","SJAG_00995","SJAG_00857","SJAG_02242","SJAG_03479","SJAG_05025","SJAG_04355","SJAG_06597","SJAG_01354","SJAG_02879","SJAG_03036","SJAG_02382","SJAG_04183","SJAG_16455","SJAG_01499","SJAG_01677","SJAG_04974","SJAG_02294","SJAG_06642","SJAG_04064","SJAG_04589","SJAG_05372","SJAG_01152","SJAG_04650","SJAG_02061","SJAG_00884","SJAG_03193","SJAG_00597","SJAG_02287","SJAG_02558","SJAG_02822","SJAG_03886","SJAG_01953","SJAG_00898","SJAG_03533","SJAG_02199","SJAG_04230","SJAG_00786","SJAG_04372","SJAG_02348","SJAG_00616","SJAG_02835","SJAG_03206","SJAG_01644","SJAG_02991","SJAG_05105","SJAG_05276","SJAG_00583","SJAG_04210","SJAG_02295","SJAG_01221","SJAG_03495","SJAG_04772","SJAG_01182","SJAG_00887","SJAG_03897","SJAG_03780","SJAG_02200","SJAG_00986"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72024],"is_not":false,"summary":null,"term":"GO:0004386"},{"annotations":[112540,76523,76496,81233,79830,72683,75164,79884,112541,72118,112542,113886,112538,79436,110528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043138"},{"annotations":[105983,114881,106798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[75901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[59128,91650,78749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043139"},{"annotations":[112114,99402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"},{"annotations":[99403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"},{"annotations":[73736,78608,88640,78064,74688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003678"},{"annotations":[89268,117808,80671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036121"},{"annotations":[80669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061749"},{"annotations":[72686,81235,79832,79887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009378"},{"annotations":[60549,102662,106834,73720,60923,115029,64579,73578,118303,57197,58079,62589,115968,77174,103063,73568,80834,77984,63072,57771,81513,98848,87231,77212,100156,100940,107353,59042,70947,80980,66437,80481,62032,69038,75899,77279,82231,95496,75839,77293,78906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003724"},{"annotations":[106801,71683,108655,114885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"},{"annotations":[64844,80361,112123,76498,75204,75166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017116"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a nucleic acid","termid":"GO:0140640"},{"relation_name":"is_a","term_name":"ATP-dependent 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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0008026","Reactome:R-HSA-5686410","Reactome:R-HSA-169461","Reactome:R-HSA-5690996","Reactome:R-HSA-169468"],"synonyms":[{"name":"ATP-dependent helicase activity","type":"exact"}],"termid":"GO:0004386","terms_by_termid":{"GO:0003678":null,"GO:0003724":null,"GO:0004386":null,"GO:0009378":null,"GO:0017116":null,"GO:0032574":null,"GO:0033678":null,"GO:0033679":null,"GO:0034458":null,"GO:0036121":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:1990518":null}}


id: FYPO:0002235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular sterol ester level","synonyms":[{"name":"increased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"increased sterol ester accumulation","type":"related"}],"termid":"FYPO:0002235"}


id: PBO:0086866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication","termid":"PBO:0086866"}


id: SO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs downstream of the transcript termination site.","direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_transcript_variant","synonyms":[{"name":"downstream transcript variant","type":"exact"}],"termid":"SO:0001987"}


id: MONDO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic fibrosis (CF) is a genetic disorder characterized by the production of sweat with a high salt content and mucus secretions with an abnormal viscosity.","definition_xrefs":["Wikipedia:Cystic_fibrosis","Orphanet:586"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","termid":"MONDO:0015509"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare male fertility disorder with obstructive azoospermia (obsolete MONDO:0018396)","termid":"MONDO:0018396"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic disorder with obstructive azoospermia (obsolete MONDO:0018409)","termid":"MONDO:0018409"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cystic fibrosis","secondary_identifiers":["ICD9:277.0","DOID:1485","MEDGEN:41393","NANDO:2100035","NORD:1026","NCIT:C2975","SCTID:190905008","MedDRA:10011762","NANDO:1200922","UMLS:C0010674","NANDO:1201021","ICD10CM:E84","NANDO:2200205","MESH:D003550","icd11.foundation:514403112","OMIM:219700","GARD:6233"],"synonyms":[{"name":"CF","type":"exact"},{"name":"cystic fibrosis","type":"exact"},{"name":"cystic fibrosis lung disease, modifier of","type":"exact"},{"name":"mucoviscidosis","type":"exact"},{"name":"pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis","type":"exact"}],"termid":"MONDO:0009061","xrefs":{"Monarch":{"xref_id":"0009061"}}}


id: PBO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 15","termid":"PBO:0052647"}


id: FYPO:0005449
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"},{"annotations":[118813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[118916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119040,119111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[118891,118892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"},{"annotations":[118790,119105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[119167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"},{"annotations":[119078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001375"},{"annotations":[118913,118906,118905,118917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[118884,118876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[118883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02252":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03143":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03892":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_05207":null},"genotype_count":12,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 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abolished","type":"exact"}],"termid":"FYPO:0005449","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYPO:0001132":null,"FYPO:0001375":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002998":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0006557":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: GO:0030792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + methylarsonite = S-adenosyl-L-homocysteine + dimethylarsinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylarsonite methyltransferase activity (obsolete GO:0030792)","termid":"GO:0030792"}


id: MONDO:0008426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shprintzen-Goldberg syndrome (SGS) is a very rare genetic disorder characterized by craniosynostosis, craniofacial and skeletal abnormalities, marfanoid habitus, cardiac anomalies, neurological abnormalities, and intellectual disability.","definition_xrefs":["Orphanet:2462"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Shprintzen-Goldberg syndrome","secondary_identifiers":["SCTID:719069008","NORD:1908","OMIM:182212","UMLS:C1321551","NCIT:C124840","GARD:4861","MEDGEN:231160"],"synonyms":[{"name":"Marfanoid craniosynostosis syndrome","type":"exact"},{"name":"Marfanoid disorder with craniosynostosis type 1","type":"related"},{"name":"Marfanoid disorder with craniosynostosis, type 1","type":"related"},{"name":"Marfanoid-craniosynostosis syndrome","type":"related"},{"name":"SGS","type":"exact"},{"name":"Shprintzen Goldberg Syndrome","type":"exact"},{"name":"Shprintzen-Goldberg craniosynostosis syndrome","type":"related"},{"name":"Shprintzen-Goldberg marfanoid syndrome","type":"related"},{"name":"Shprintzen-Goldberg syndrome","type":"exact"},{"name":"craniosynostosis with arachnodactyly and abdominal hernias","type":"related"}],"termid":"MONDO:0008426","xrefs":{"Monarch":{"xref_id":"0008426"}}}


id: PBO:0048557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 2","termid":"PBO:0048557"}


id: MONDO:0030607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bryant-Li-Bhoj neurodevelopmental syndrome","termid":"MONDO:0031200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bryant-Li-Bhoj neurodevelopmental syndrome 2","secondary_identifiers":["OMIM:619721","UMLS:C5676906","MEDGEN:1811435"],"synonyms":[{"name":"BRYLIB2","type":"exact"}],"termid":"MONDO:0030607","xrefs":{"Monarch":{"xref_id":"0030607"}}}


id: GO:0097297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:0097297)","synonyms":[{"name":"activation of effector caspase activity","type":"narrow"}],"termid":"GO:0097297"}


id: PBO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.6","termid":"PBO:0001127"}


id: MONDO:0006192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary endometrial adenocarcinoma composed of neoplastic cells that form complex glandular patterns associated with budding and branching of the neoplastic glands. The neoplastic glands resemble those of the normal endometrium and may or may not be associated with sheet-like proliferation of malignant cells. Endometrioid adenocarcinoma is the most commonly seen morphologic variant of endometrial adenocarcinoma.","definition_xrefs":["NCIT:C6287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial endometrioid adenocarcinoma","secondary_identifiers":["icd11.foundation:671511103","MEDGEN:234467","ONCOTREE:UEC","UMLS:C1336905","EFO:1000233"],"synonyms":[{"name":"endometrial endometrioid adenocarcinoma","type":"exact"},{"name":"endometrioid adenocarcinoma of endometrium","type":"exact"},{"name":"endometrioid adenocarcinoma of the endometrium","type":"exact"},{"name":"endometrioid carcinoma of endometrium","type":"exact"},{"name":"endometrioid carcinoma of the endometrium","type":"exact"},{"name":"endometrioid endomet. adenocar.","type":"exact"},{"name":"endometrioid endometrial adenocarcinoma","type":"exact"},{"name":"uterine corpus endometrioid adenocarcinoma","type":"exact"},{"name":"uterine corpus endometrioid carcinoma","type":"exact"},{"name":"uterine endometrioid carcinoma","type":"related"}],"termid":"MONDO:0006192","xrefs":{"Monarch":{"xref_id":"0006192"}}}


id: PBO:0055288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2715","termid":"PBO:0055288"}


id: PBO:0029207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_elongation","termid":"PBO:0029207"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: PR:P05752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps601 gene.","definition_xrefs":["UniProtKB:P05752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.07c","synonyms":[{"name":"Spom972h-rps601","type":"exact"}],"termid":"PR:P05752"}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: PBO:0056062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 2","termid":"PBO:0056062"}


id: GO:0035350
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which flavin-adenine dinucleotide (FAD) is transported across a membrane. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transport","termid":"GO:0015883"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD membrane transport","type":"exact"}],"termid":"GO:0035350","terms_by_termid":{"GO:1990548":null}}


id: FYPO:0003248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromere inner repeat regions is higher than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone H3 at centromere inner repeat","synonyms":[{"name":"increased level of histone H3 at centromere imr","type":"exact"},{"name":"increased level of histone H3 at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased level of histone H3 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003248"}


id: PBO:0074215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 1","termid":"PBO:0074215"}


id: GO:0031604
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the outer ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome core complex, alpha-subunit complex","termid":"GO:0031604"}


id: PBO:0084917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone; required for the assembly of alpha and beta subunits into the F1 sector of mitochondrial F1F0 ATP synthase; N-terminally propionylated in vivo","termid":"PBO:0084917"}


id: PBO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc4","termid":"PBO:0003467"}


id: MONDO:0009305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulocytopenia with immunoglobulin abnormality","secondary_identifiers":["DOID:0111974","MESH:C565535","MEDGEN:383874","UMLS:C1856263","OMIM:233600"],"synonyms":[{"name":"granulocytopenia with immunoglobulin abnormality","type":"exact"},{"name":"immunodeficiency 59 and hypoglycemia","type":"exact"}],"termid":"MONDO:0009305","xrefs":{"Monarch":{"xref_id":"0009305"}}}


id: GO:0006623
data:
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id: GO:0097600
data:
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id: GO:0007591
data:
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id: GO:0098029
data:
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id: PBO:0084413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor involved in osmotic stress response; SMP1 has a paralog, RLM1, that arose from the whole genome duplication","termid":"PBO:0084413"}


id: PBO:0050250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 28","termid":"PBO:0050250"}


id: PBO:0119667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 4","termid":"PBO:0119667"}


id: PBO:0086848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative redox protein containing a thioredoxin fold; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086848"}


id: GO:0009057
data:
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