# terms

id: PBO:0041284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9","termid":"PBO:0041284"}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: PBO:0028456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_assembly","termid":"PBO:0028456"}


id: PBO:0049961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 7","termid":"PBO:0049961"}


id: PBO:0054366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1760","termid":"PBO:0054366"}


id: PBO:0067836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 138","termid":"PBO:0067836"}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: GO:0003725
data:
  {"annotated_genes":["SJAG_04019","SJAG_03897","SJAG_03689","SJAG_04369","SJAG_02156","SJAG_01643","SJAG_04527","SJAG_04700","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61939,66171,66358,69488,78811,80325,108053,109415,115594],"is_not":false,"summary":null,"term":"GO:0003725"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01643":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_03897":null,"SJAG_04019":null,"SJAG_04369":null,"SJAG_04410":null,"SJAG_04527":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"double-stranded RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"dsRNA binding","type":"exact"}],"termid":"GO:0003725","terms_by_termid":{"GO:0003725":null}}


id: PBO:0044910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit beta","termid":"PBO:0044910"}


id: GO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}


id: PBO:0065461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD6 antisense RNA 1","termid":"PBO:0065461"}


id: MONDO:0010917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocalcinosis","termid":"MONDO:0001314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis 1","secondary_identifiers":["MEDGEN:331527","OMIM:600668","GARD:6048","MESH:C535938","UMLS:C1833499"],"synonyms":[{"name":"CCAL1","type":"exact"},{"name":"chondrocalcinosis 1","type":"exact"},{"name":"chondrocalcinosis with early-onset osteoarthritis","type":"related"}],"termid":"MONDO:0010917","xrefs":{"Monarch":{"xref_id":"0010917"}}}


id: GO:0046352
data:
  {"annotated_genes":["SJAG_04301","SJAG_02131","SJAG_02949","SJAG_03824","SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101123,101124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[69614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[78580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[73237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of disaccharides, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"},{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"disaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"disaccharide breakdown","type":"exact"},{"name":"disaccharide catabolism","type":"exact"},{"name":"disaccharide degradation","type":"exact"}],"termid":"GO:0046352","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null}}


id: PBO:0005335
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.1","termid":"PBO:0005335"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:TermGenie","PMID:7683668","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heparan sulfate binding (obsolete GO:1905853)","termid":"GO:1905853"}


id: MONDO:0008613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuftsin deficiency","secondary_identifiers":["OMIM:191150","SCTID:234584007","UMLS:C0398741","MESH:C562872","MEDGEN:98311","ICD9:279.03"],"synonyms":[{"name":"Tuftsin deficiency","type":"exact"}],"termid":"MONDO:0008613","xrefs":{"Monarch":{"xref_id":"0008613"}}}


id: GO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:rn","PMID:14978214","PMID:18439143"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0036091)","termid":"GO:0036091"}


id: PBO:0069781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1066, pseudogene","termid":"PBO:0069781"}


id: MONDO:0006191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell adenocarcinoma that involves the endometrium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial clear cell adenocarcinoma","secondary_identifiers":["EFO:1000231","DOID:5299","NCIT:C8028","UMLS:C0279765","icd11.foundation:388735319","MEDGEN:124655"],"synonyms":[{"name":"clear cell carcinoma of endometrium","type":"exact"},{"name":"clear cell carcinoma of the endometrium","type":"exact"},{"name":"endometrial clear cell adenocarcinoma","type":"exact"},{"name":"endometrium clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0006191","xrefs":{"Monarch":{"xref_id":"0006191"}}}


id: GO:1990914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the periplasmic side of the membrane.","definition_xrefs":["GOC:bhm","PMID:15919996"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of periplasmic side of plasma membrane (obsolete GO:1990914)","termid":"GO:1990914"}


id: PBO:0053690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 885","termid":"PBO:0053690"}


id: MONDO:0005499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glioma that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain glioma","secondary_identifiers":["UMLS:C0349661","MEDGEN:91163","NCIT:C162993","DOID:0060108","SCTID:254937005"],"synonyms":[{"name":"brain malignant glioma","type":"exact"},{"name":"malignant glioma of brain","type":"exact"}],"termid":"MONDO:0005499","xrefs":{"Monarch":{"xref_id":"0005499"}}}


id: CHEBI:37903
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl group","termid":"CHEBI:37903"}


id: PBO:0081105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB1 transcriptional regulator RNA","termid":"PBO:0081105"}


id: GO:1904762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:20533548","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"positively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast differentiation","synonyms":[{"name":"activation of myofibroblast cell differentiation","type":"narrow"},{"name":"activation of myofibroblast differentiation","type":"narrow"},{"name":"positive regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up regulation of myofibroblast differentiation","type":"exact"},{"name":"up-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"up-regulation of myofibroblast differentiation","type":"exact"},{"name":"upregulation of myofibroblast cell differentiation","type":"exact"},{"name":"upregulation of myofibroblast differentiation","type":"exact"}],"termid":"GO:1904762"}


id: GO:0009782
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The antenna complex of photosystem I. A photosystem has two closely linked components, an antenna containing light-absorbing pigments and a reaction center. Each antenna contains one or more light-harvesting complexes (LHCs).","definition_xrefs":["GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I antenna complex","termid":"GO:0009782"}


id: FYPO:0006334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion limitation","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to zinc starvation","type":"exact"},{"name":"decreased RNA level in response to zinc ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0006334"}


id: GO:0072102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus are generated and organized. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus morphogenesis","termid":"GO:0072102"}


id: GO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy.","definition_xrefs":["PMID:10200167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"doxorubicin metabolic process","termid":"GO:0044598"}


id: PBO:0038403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-process_has_causal_agent","termid":"PBO:0038403"}


id: MONDO:0019228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of histidine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of histidine metabolism","secondary_identifiers":["SCTID:44176004","MEDGEN:541342","UMLS:C0268512","GARD:18959","Orphanet:79181","ICD9:270.5","DOID:9265","icd11.foundation:543162269","ICD10CM:E70.40"],"synonyms":[{"name":"disorder of histidine metabolic process","type":"exact"},{"name":"disorder of histidine metabolism","type":"exact"},{"name":"disturbance of histidine metabolism","type":"exact"},{"name":"histidine metabolic process disease","type":"exact"},{"name":"histidine metabolism disease","type":"exact"},{"name":"inborn disorder of histidine metabolism","type":"exact"},{"name":"inborn error of histidine metabolic process","type":"exact"},{"name":"inborn error of histidine metabolism","type":"exact"},{"name":"inborn histidine metabolic process disorder","type":"exact"},{"name":"rare inborn error of histidine metabolic process","type":"exact"}],"termid":"MONDO:0019228","xrefs":{"Monarch":{"xref_id":"0019228"}}}


id: GO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of recombination within rDNA repeats (obsolete GO:0000020)","synonyms":[{"name":"negative regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0000020"}


id: GO:1903205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced cell death (obsolete GO:1903205)","synonyms":[{"name":"protection against hydrogen peroxide-mediated cell death","type":"related"},{"name":"regulation of cell death in response to H2O2","type":"exact"},{"name":"regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1903205"}


id: GO:0140403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30584105","PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"},{"relation_name":"is_a","term_name":"effector-mediated suppression of host defense response","termid":"GO:0140590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host innate immune response","synonyms":[{"name":"effector-mediated suppression of host innate immune response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immunity","type":"exact"},{"name":"effector dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector triggered suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-triggered suppression of host immune innate response by symbiont","type":"exact"}],"termid":"GO:0140403"}


id: PBO:0053721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 933","termid":"PBO:0053721"}


id: SO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type VIa beta turn with the following phi and psi sngles on amino acid residues 2 and 3: phi-2 = -60 degrees, psi-2 = 120 degrees, phi-3 = -90 degrees, psi-3 = 0 degrees.","definition_xrefs":["PMID:27428516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six_a","termid":"SO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a_one","synonyms":[{"name":"beta turn type six a one","type":"exact"},{"name":"type VIa1 beta turn","type":"exact"},{"name":"type VIa1 turn","type":"exact"}],"termid":"SO:0001152"}


id: MONDO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vein of Galen aneurysm is a rare formof arteriovenous malformation in which the embryonic precursor to the vein of Galen, a vein at the base of the brain, dilates causing too much blood to rush to the heart. This can lead to rapid heart failure. Other features may include increased head circumference resulting from hydrocephalus, unusually prominent veins on the face and scalp, developmental delay, persistent headache, and other neurological findings. Vein of Galen aneurysm is often recognized on an ultrasound late in pregnancy. In other cases, it is diagnosed after birth. Although the exact cause remains unknown, this condition appears to result from a defect in early fetal development. Treatment is aimed at decreasing the blood flow through the malformation while maximizing the blood supply to the brain. Minimally invasive surgical techniques are preferred, such as endovascular embolization.","direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"},{"relation_name":"is_a","term_name":"cerebral hemangioma","termid":"MONDO:0003948"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein of Galen aneurysm","secondary_identifiers":["MEDGEN:140912","MESH:C536535","SCTID:253194008","GARD:5467","UMLS:C0431420","icd11.foundation:1884295064","Orphanet:1053","NCIT:C98642"],"synonyms":[{"name":"Galen vein aneurysm","type":"related"},{"name":"Galenic arteriovenous malformation","type":"related"},{"name":"VGAM","type":"related"},{"name":"ectasia or varix of the vein of Galen","type":"related"},{"name":"vein of Galen aneurysm malformation","type":"related"},{"name":"vein of Galen arteriovenous malformations","type":"exact"}],"termid":"MONDO:0015196","xrefs":{"Monarch":{"xref_id":"0015196"}}}


id: GO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oskar mRNA translation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of oskar mRNA translation","synonyms":[{"name":"activation of oskar mRNA translation","type":"narrow"},{"name":"stimulation of oskar mRNA translation","type":"narrow"},{"name":"up regulation of oskar mRNA translation","type":"exact"},{"name":"up-regulation of oskar mRNA translation","type":"exact"},{"name":"upregulation of oskar mRNA translation","type":"exact"}],"termid":"GO:0046012"}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: PBO:0116615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3141","termid":"PBO:0116615"}


id: PBO:0051395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 3","termid":"PBO:0051395"}


id: GO:0031482
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class XII myosin heavy chains and associated light chains; myosin XII contains a large tail region with two MyTH4 domains and a short region of coiled coil.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin XII complex","termid":"GO:0031482"}


id: PBO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 3","termid":"PBO:0046703"}


id: PBO:0039792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 3","termid":"PBO:0039792"}


id: MONDO:1010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, horse","secondary_identifiers":["OMIA:000278-9796"],"termid":"MONDO:1010569","xrefs":{"Monarch":{"xref_id":"1010569"}}}


id: MOD:00068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-myristoylglycine.","definition_xrefs":["PubMed:11955008","OMSSA:80","PubMed:1326520","PubMed:11955007","Unimod:45#G","PubMed:7543369","PubMed:1386601","RESID:AA0059","PubMed:6436247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-myristoylglycine","synonyms":[{"name":"(tetradecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-myristoyl glycine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N-(1-oxotetradecyl)glycine","type":"exact"},{"name":"N-(C14:0 aliphatic acyl)glycine","type":"exact"},{"name":"N-myristoyl-glycine","type":"exact"},{"name":"N-myristoylated glycine","type":"exact"},{"name":"N-myristylglycine","type":"exact"},{"name":"N-tetradecanoylglycine","type":"exact"},{"name":"NMyrGly","type":"exact"},{"name":"ntermpepmyristoylationg","type":"exact"}],"termid":"MOD:00068"}


id: FYPO:0004989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is abnormal during one or both meiotic nuclear divisions, such that one or more centromeres is associated with the spindle pole body (SPB) during prophase. Normally, centromeres and SPBs associate after prophase, but not earlier.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering resulting in centromere-spindle pole body colocalization during prophase","synonyms":[{"name":"abnormal centromere clustering during meiosis resulting in centromere-spindle pole body colocalization during prophase","type":"exact"},{"name":"abnormal chromosome retrieval during meiosis resulting in centromere-spindle pole body colocalization during prophase","type":"related"},{"name":"abnormal kinetochore retrieval during meiosis resulting in centromere-spindle pole body colocalization during prophase","type":"related"},{"name":"abnormal meiotic centromere clustering resulting in centromere-SPB colocalization during prophase","type":"exact"},{"name":"abnormal meiotic centromere clustering resulting in centromere-spindle pole body colocalisation during prophase","type":"exact"},{"name":"abnormal meiotic centromere clustering resulting in centromere-spindle pole body colocalization during meiotic prophase","type":"exact"},{"name":"abnormal meiotic centromere clustering resulting in premature centromere-spindle pole body colocalization","type":"related"},{"name":"centromeres colocalized with SPB during meiosis","type":"exact"},{"name":"centromeres colocalized with SPB during meiotic cell cycle","type":"related"},{"name":"centromeres colocalized with spindle pole body during meiosis","type":"exact"},{"name":"centromeres colocalized with spindle pole body during meiotic cell cycle","type":"related"}],"termid":"FYPO:0004989"}


id: PBO:0030942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization","termid":"PBO:0030942"}


id: GO:1904534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","GOC:nc","PMID:22579284","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"negatively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop disassembly","synonyms":[{"name":"down regulation of T loop disassembly","type":"exact"},{"name":"down regulation of telomeric loop disassembly","type":"exact"},{"name":"down-regulation of T loop disassembly","type":"exact"},{"name":"down-regulation of telomeric loop disassembly","type":"exact"},{"name":"downregulation of T loop disassembly","type":"exact"},{"name":"downregulation of telomeric loop disassembly","type":"exact"},{"name":"inhibition of T loop disassembly","type":"narrow"},{"name":"inhibition of telomeric loop disassembly","type":"narrow"},{"name":"negative regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904534"}


id: PBO:0090961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase","termid":"PBO:0090961"}


id: PBO:0086274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with an N-terminal kelch-like domain; putative negative regulator of early meiotic gene expression; required, with Mds3p, for growth under alkaline conditions; PMD1 has a paralog, MDS3, that arose from the whole genome duplication","termid":"PBO:0086274"}


id: PBO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no detectable long open reading frame","termid":"PBO:0000063"}


id: GO:0015534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (proline, glycine or betaine)(out) + (H+ or Na+)(out) = (proline, glycine or betaine)(in) + (H+ or Na+)(in).","definition_xrefs":["TC:2.A.1.6.4"],"gene_count":0,"genotype_count":0,"name":"obsolete proline/glycine/betaine:hydrogen/sodium symporter activity (obsolete GO:0015534)","synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"exact"},{"name":"proline/glycine/betaine:proton/sodium symporter","type":"exact"}],"termid":"GO:0015534"}


id: PBO:0072807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 4A","termid":"PBO:0072807"}


id: MOD:01646
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine removal","termid":"MOD:01646"}


id: PBO:0082043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; respiratory defect of the null mutant is partially complemented by human COQ5","termid":"PBO:0082043"}


id: PBO:0029085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_clotrimazole","termid":"PBO:0029085"}


id: PBO:0059508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block I","termid":"PBO:0059508"}


id: GO:0032588
data:
  {"annotated_genes":["SJAG_02912","SJAG_05330","SJAG_02168","SJAG_00296","SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90201,90686,92698,95223,106922],"is_not":false,"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"trans-Golgi network","termid":"GO:0005802"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_02168":null,"SJAG_02912":null,"SJAG_03953":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi trans face membrane","type":"related"},{"name":"trans Golgi network membrane","type":"exact"}],"termid":"GO:0032588","terms_by_termid":{"GO:0032588":null}}


id: PBO:0040749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 1","termid":"PBO:0040749"}


id: MONDO:0016595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute systemic infection caused by the inhalation of Bacillus anthracis spores (e.g. through infected animal products, bioterrorism) and characterized by an initial stage where patients present with non specific symptoms (fever, cough, chills, fatigue) that is followed by an acute phase during which hemorrhagic mediastinitis occurs that can progress into meningitis, gastrointestinal involvement, and refractory shock, that can be fatal, if left untreated.","definition_xrefs":["Orphanet:247257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational anthrax","secondary_identifiers":["MESH:C571912","GARD:20657","UMLS:C0155866","MedDRA:10035667","MEDGEN:57841","SCTID:11389007","DOID:0050160","ICD9:022.1"],"synonyms":[{"name":"inhalation anthrax","type":"related"},{"name":"inhalation anthrax disease","type":"exact"},{"name":"pulmonary anthrax","type":"exact"},{"name":"respiratory anthrax","type":"exact"},{"name":"respiratory anthrax disease","type":"exact"},{"name":"wool-sorters' disease","type":"exact"},{"name":"woolsorters' disease","type":"exact"}],"termid":"MONDO:0016595","xrefs":{"Monarch":{"xref_id":"0016595"}}}


id: PBO:0044053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP3 and E2F8 antisense RNA 1","termid":"PBO:0044053"}


id: PBO:0087983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; methylates the N-1 position of guanine at position 9 in tRNAs; protein abundance increases in response to DNA replication stress; member of the SPOUT (SpoU-TrmD) methyltransferase family; human ortholog TRMT10A plays a role in the pathogenesis of microcephaly and early onset diabetes; an 18-mer originates from the TRM10 locus; genetic analysis shows the 18-mer is the translation regulator","termid":"PBO:0087983"}


id: PBO:0044124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 10, pseudogene","termid":"PBO:0044124"}


id: PR:Q10317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med20 gene.","definition_xrefs":["UniProtKB:Q10317","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.05","synonyms":[{"name":"Spom972h-med20","type":"exact"},{"name":"mediator complex subunit 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10317"}


id: SO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ncRNA_gene that encodes an ncRNA less than 200 nucleotides in length.","definition_xrefs":["PMID:30937442","PMID:28449079","PMID:30069443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sncRNA_gene","synonyms":[{"name":"small non-coding RNA gene","type":"exact"},{"name":"sncRNA gene","type":"exact"}],"termid":"SO:0002342"}


id: PR:O14124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A11.10c gene.","definition_xrefs":["UniProtKB:O14124","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized dipeptidase C3A11.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.10c","synonyms":[{"name":"Spom972h-SPAC3A11.10c","type":"exact"}],"termid":"PR:O14124"}


id: FYPO:0003708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal conjugation frequency","termid":"FYPO:0003797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of conjugation with h+ cells","synonyms":[{"name":"normal conjugation with WT h+ cells","type":"exact"},{"name":"normal frequency of conjugation with h plus cells","type":"exact"},{"name":"normal frequency of mating with h+ cells","type":"exact"}],"termid":"FYPO:0003708"}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["PMID:12140278","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:19843166","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: GO:1904336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["PMID:16303610","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"negative regulation of artery morphogenesis","termid":"GO:1905652"},{"relation_name":"negatively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ductus arteriosus closure","synonyms":[{"name":"down regulation of ductus arteriosus closure","type":"exact"},{"name":"down-regulation of ductus arteriosus closure","type":"exact"},{"name":"downregulation of ductus arteriosus closure","type":"exact"},{"name":"inhibition of ductus arteriosus closure","type":"narrow"}],"termid":"GO:1904336"}


id: MONDO:0005730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with nematodes of the genus dictyocaulus. In deer, cattle, sheep, and horses the bronchi are the site of infestation.","definition_xrefs":["MESH:D004022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichostrongyloidiasis, non-human animal","termid":"MONDO:0700204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dictyocaulus infectious disease","secondary_identifiers":["MONDO:0025190"],"synonyms":[{"name":"Dictyocauliases","type":"related"},{"name":"Dictyocauliasis","type":"related"},{"name":"Dictyocaulus caused disease or disorder","type":"exact"},{"name":"Dictyocaulus disease or disorder","type":"exact"},{"name":"Dictyocaulus infection","type":"related"},{"name":"infection, Dictyocaulus","type":"related"},{"name":"infections, Dictyocaulus","type":"related"}],"termid":"MONDO:0005730","xrefs":{"Monarch":{"xref_id":"0005730"}}}


id: GO:0005774
data:
  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lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of 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id: PBO:0032736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport protein Avl9 (predicted)","termid":"PBO:0032736"}


id: PBO:0081183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger GRF-type containing 1","termid":"PBO:0081183"}


id: PBO:0054011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1341","termid":"PBO:0054011"}


id: MONDO:0011356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosis, Dupuytren subungual","secondary_identifiers":["OMIM:603656","MESH:C535723","UMLS:C1863622","MEDGEN:350935"],"synonyms":[{"name":"Dupuytren subungual exostosis","type":"related"},{"name":"exostosis, Dupuytren subungual","type":"exact"},{"name":"subungual exostoses","type":"related"}],"termid":"MONDO:0011356","xrefs":{"Monarch":{"xref_id":"0011356"}}}


id: MONDO:1040001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any developmental defect during embryogenesis in which the cause of the disease is a mutation in the TP63 gene. This disease is characterized by variable ectodermal dysplasia, limb defects, and orofacial clefting.","definition_xrefs":["PMID:10839977","PMID:21204238","PMID:11159940","PMID:10535733","PMID:11528512","PMID:16740912","PMID:11462173","PMID:22574117","PMID:12766194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001","xrefs":{"Monarch":{"xref_id":"1040001"}}}


id: PBO:0091176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein","termid":"PBO:0091176"}


id: PBO:0071208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 49","termid":"PBO:0071208"}


id: MONDO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection of the nail, usually caused by dermatophytes; yeasts; or nondermatophyte molds.","definition_xrefs":["MESH:D014009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea unguium","secondary_identifiers":["UMLS:C0040261","DOID:13074","ICD9:681.9","ICD10CM:B35.1","MEDGEN:11825","NCIT:C112214"],"synonyms":[{"name":"cellulitis and abscess","type":"related"},{"name":"cellulitis and abscess of buttock","type":"exact"},{"name":"cellulitis and abscess of face","type":"exact"},{"name":"cellulitis and abscess of finger","type":"exact"},{"name":"cellulitis and abscess of finger and toe","type":"exact"},{"name":"cellulitis and abscess of gluteal region","type":"exact"},{"name":"cellulitis and abscess of trunk","type":"exact"},{"name":"cellulitis and abscess of upper arm and forearm","type":"exact"},{"name":"dermatophytic onychia","type":"exact"},{"name":"dermatophytic onychomycosis","type":"exact"},{"name":"dermatophytosis of nail","type":"exact"},{"name":"nail dermatophytosis","type":"exact"},{"name":"onychomycosis","type":"exact"},{"name":"onychomycosis due to dermatophyte","type":"exact"},{"name":"tinea unguium","type":"exact"}],"termid":"MONDO:0001628","xrefs":{"Monarch":{"xref_id":"0001628"}}}


id: MONDO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibula, recurrent dislocation of head of","secondary_identifiers":["UMLS:C1851099","OMIM:135800","MEDGEN:338206","MESH:C565011"],"synonyms":[{"name":"fibula, recurrent dislocation of head of","type":"exact"}],"termid":"MONDO:0007616","xrefs":{"Monarch":{"xref_id":"0007616"}}}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: GO:0018632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: p-nitrophenol + O2 + NADPH = H2O + NADP+ + nitrite + p-benzoquinone.","definition_xrefs":["RHEA:34327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrophenol 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.167","UM-BBD_reactionID:r0226","MetaCyc:RXN-8739"],"termid":"GO:0018632"}


id: PBO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein","termid":"PBO:0005568"}


id: GO:0008611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["GOC:ma","ISBN:0198547684","PMID:15337120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"glycerol ether biosynthetic process","termid":"GO:0046504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ether lipid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-75896"],"synonyms":[{"name":"ether lipid anabolism","type":"exact"},{"name":"ether lipid biosynthesis","type":"exact"},{"name":"ether lipid formation","type":"exact"},{"name":"ether lipid synthesis","type":"exact"},{"name":"plasmalogen biosynthetic process","type":"narrow"}],"termid":"GO:0008611"}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: GO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi ribbon formation","termid":"GO:0090161"},{"relation_name":"part_of","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"asymmetric Golgi ribbon formation","termid":"GO:0090164"}


id: PBO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0002433"}


id: MONDO:0012820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the SMAD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 3","secondary_identifiers":["UMLS:C2677123","MEDGEN:436866","OMIM:612229"],"synonyms":[{"name":"CRCS3","type":"related"},{"name":"SMAD7 colorectal cancer","type":"exact"},{"name":"colorectal cancer caused by mutation in SMAD7","type":"exact"},{"name":"colorectal cancer, susceptibility to, 3","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 18","type":"related"},{"name":"colorectal cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to colorectal cancer 3","type":"related"}],"termid":"MONDO:0012820","xrefs":{"Monarch":{"xref_id":"0012820"}}}


id: PBO:0085599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in C/D snoRNP assembly; regulates abundance of Rsa1p; required for growth at high temperature; similar to human ZNHIT3","termid":"PBO:0085599"}


id: MONDO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Churg-Strauss syndrome (obsolete MONDO:0005703)","termid":"MONDO:0005703","xrefs":{"Monarch":{"xref_id":"0005703"}}}


id: PBO:0109145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRUNE1 pseudogene 1","termid":"PBO:0109145"}


id: MONDO:1011478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune hemolytic anemia, domestic cat","secondary_identifiers":["OMIA:000432-9685"],"termid":"MONDO:1011478","xrefs":{"Monarch":{"xref_id":"1011478"}}}


id: GO:0045986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"negatively_regulates","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle contraction","synonyms":[{"name":"down regulation of smooth muscle contraction","type":"exact"},{"name":"down-regulation of smooth muscle contraction","type":"exact"},{"name":"downregulation of smooth muscle contraction","type":"exact"},{"name":"inhibition of smooth muscle contraction","type":"narrow"},{"name":"smooth muscle relaxation","type":"related"}],"termid":"GO:0045986"}


id: MONDO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial scaphocephaly syndrome, McGillivray type is a rare newly described craniosynostosis syndrome characterized by scaphocephaly, macrocephaly, severe maxillary retrusion, and mild intellectual disability.","definition_xrefs":["Orphanet:168624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"familial scaphocephaly syndrome, McGillivray type","secondary_identifiers":["OMIM:609579","MEDGEN:355365","UMLS:C1865070","icd11.foundation:512057922","GARD:3426","MESH:C566511"],"synonyms":[{"name":"scaphocephaly, maxillary retrusion, and intellectual disability","type":"related"},{"name":"scaphocephaly, maxillary retrusion, and mental retardation","type":"related"},{"name":"scaphocephaly-macrocephaly-maxillary retrusion-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0012307","xrefs":{"Monarch":{"xref_id":"0012307"}}}


id: MONDO:0014383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tubular aggregate myopathy in which the cause of the disease is a mutation in the ORAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubular aggregate myopathy","termid":"MONDO:0008051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, tubular aggregate, 2","secondary_identifiers":["OMIM:615883","DOID:0080686","GARD:16026","MEDGEN:862994","UMLS:C4014557"],"synonyms":[{"name":"ORAI1 tubular aggregate myopathy","type":"exact"},{"name":"TAM2","type":"related"},{"name":"myopathy, tubular aggregate, 2","type":"exact"},{"name":"myopathy, tubular aggregate, type 2","type":"exact"},{"name":"tubular aggregate myopathy caused by mutation in ORAI1","type":"exact"}],"termid":"MONDO:0014383","xrefs":{"Monarch":{"xref_id":"0014383"}}}


id: SO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_cyano_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_cyano_seven_deazaguanosine","secondary_identifiers":["RNAMOD:047"],"synonyms":[{"name":"7-cyano-7-deazaguanosine","type":"exact"},{"name":"preQ0","type":"exact"},{"name":"seven cyano seven deazaguanosine","type":"exact"}],"termid":"SO:0001321"}


id: MONDO:0014380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colobomatous microphthalmia-rhizomelic dysplasia syndrome is a rare, genetic developmental defect during embryogenesis characterized by a range of developmental eye anomalies (including anophthalmia, microphthalmia, colobomas, microcornea, corectopia, cataract) and symmetric limb rhizomelia with short stature and contractures of large joints. Intellectual disability with autistic features, macrocephaly, dysmorphic features, urogenital anomalies (hypospadia, cryptorchidism), cutaneous syndactyly and precocious puberty may also be present.","definition_xrefs":["Orphanet:424099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"colobomatous microphthalmia-rhizomelic dysplasia syndrome","secondary_identifiers":["MEDGEN:862977","DOID:0111802","GARD:17707","OMIM:615877","UMLS:C4014540"],"synonyms":[{"name":"MCOPS14","type":"related"},{"name":"MCSKS","type":"related"},{"name":"microphthalmia and coloboma, with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia or coloboma with or without rhizomelic skeletal dysplasia","type":"related"},{"name":"microphthalmia, syndromic 14","type":"related"},{"name":"microphthalmia, syndromic type 14","type":"exact"},{"name":"microphthalmia-coloboma-rhizomelic skeletal dysplasia","type":"exact"},{"name":"microphthalmia/coloboma and skeletal dysplasia syndrome","type":"related"}],"termid":"MONDO:0014380","xrefs":{"Monarch":{"xref_id":"0014380"}}}


id: GO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylglycerol, through sequential deacylation and re-acylation reactions, to generate phosphatidylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15485873","PMID:18458083","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482925"],"synonyms":[{"name":"phosphatidylglycerol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036148"}


id: GO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"lung lobe morphogenesis","termid":"GO:0060463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe formation","termid":"GO:0060464"}


id: GO:0015899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aminotriazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminotriazole is an effective weed killer that also possesses some antithyroid activity.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"aminotriazole transport","termid":"GO:0015899"}


id: PBO:0027139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus","termid":"PBO:0027139"}


id: GO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther dehiscence","termid":"GO:0009901"}


id: PBO:0039222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKR7A2 pseudogene 1","termid":"PBO:0039222"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: GO:0000390
data:
  {"annotated_genes":["SJAG_05025","SJAG_00597","SJAG_03301","SJAG_00206","SJAG_02560"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57298,64583,76662,80444,87228],"is_not":false,"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"Disassembly of a spliceosomal complex with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"spliceosomal complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000391","GO:0000392"],"synonyms":[{"name":"U12-type spliceosome disassembly","type":"narrow"},{"name":"U2-type spliceosome disassembly","type":"narrow"},{"name":"spliceosome complex disassembly","type":"exact"},{"name":"spliceosome disassembly","type":"broad"}],"termid":"GO:0000390","terms_by_termid":{"GO:0000390":null}}


id: PBO:0077213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 4","termid":"PBO:0077213"}


id: MONDO:0100285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of infants in which there is progressive obliteration or discontinuity of the extrahepatic biliary system, resulting in obstruction of bile flow.","definition_xrefs":["OMIM:210500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic biliary atresia","secondary_identifiers":["MEDGEN:1621383","GARD:886","icd11.foundation:1813934523","NCIT:C97069","UMLS:C4520983"],"synonyms":[{"name":"EHBA","type":"exact"},{"name":"biliary atresia, extrahepatic","type":"exact"}],"termid":"MONDO:0100285","xrefs":{"Monarch":{"xref_id":"0100285"}}}


id: GO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the transmission of a nerve impulse in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of transmission of nerve impulse in another organism (obsolete GO:0044486)","synonyms":[{"name":"modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"modulation of transmission of nerve impulse in other organism","type":"exact"},{"name":"regulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044486"}


id: PBO:0113356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for spore wall formation; subunit of leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms ring-like structure at leading edge of prospore membrane during meiosis II; mediates assembly of LEP complex, formation of ring-like structure via interaction with spindle pole body components, and prospore membrane maturation; also detected in peroxisomes; potentially phosphorylated by Cdc28p; ADY3 has a paralog, CNM67, that arose from the whole genome duplication","termid":"PBO:0113356"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeraniol kinase activity (obsolete GO:0052671)","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: MONDO:1011981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, non-human animal","secondary_identifiers":["OMIA:000880"],"termid":"MONDO:1011981","xrefs":{"Monarch":{"xref_id":"1011981"}}}


id: GO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:mah","GOC:add","PMID:9368779","PMID:11929129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-A specific inhibitory MHC class I receptor activity","termid":"GO:0030107"}


id: PATO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distribution which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"distributed","termid":"PATO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distribution","synonyms":[{"name":"low distribution","type":"exact"}],"termid":"PATO:0001672"}


id: PBO:0048583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 7","termid":"PBO:0048583"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: GO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antifungal peptide.","definition_xrefs":["PMID:15638771","PMID:11807545","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}


id: GO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The compaction of chromatin during apoptosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic chromosome condensation","secondary_identifiers":["Wikipedia:Pyknosis"],"synonyms":[{"name":"pyknosis","type":"exact"}],"termid":"GO:0030263"}


id: PBO:0082676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; implicated in osmotic stress response; other complex members are Kae1p, Cgi121p, Pcc1p, and Bud32p","termid":"PBO:0082676"}


id: PBO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Meu14","termid":"PBO:0004796"}


id: GO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"}


id: GO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgD isotypes","synonyms":[{"name":"activation of isotype switching to IgD isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"positive regulation of class switching to IgD isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgD isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgD isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgD isotypes","type":"exact"}],"termid":"GO:0048301"}


id: GO:0047536
data:
  {"annotated_genes":["SJAG_04678","SJAG_03312","SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74301,78444,98893],"is_not":false,"summary":null,"term":"GO:0047536"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-2-aminoadipate = 2-oxoadipate + L-glutamate.","definition_xrefs":["EC:2.6.1.39","RHEA:12601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03312":null,"SJAG_04678":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-aminoadipate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01939","MetaCyc:2-AMINOADIPATE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-508561","Reactome:R-HSA-70952"],"synonyms":[{"name":"2-aminoadipate aminotransferase activity","type":"exact"},{"name":"2-aminoadipic aminotransferase activity","type":"related"},{"name":"L-2-aminoadipate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"alpha-aminoadipate aminotransferase activity","type":"related"},{"name":"glutamate-alpha-ketoadipate transaminase activity","type":"related"},{"name":"glutamic-ketoadipic transaminase activity","type":"related"}],"termid":"GO:0047536","terms_by_termid":{"GO:0047536":null}}


id: CHEBI:49786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nickel(2+)","termid":"CHEBI:49786"}


id: GO:0061513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose 6-phosphate(out) + phosphate(in) = glucose 6-phosphate(in) + phosphate(out).","definition_xrefs":["PMID:18337460","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose-6-phosphate transmembrane transporter activity","termid":"GO:0015152"},{"relation_name":"is_a","term_name":"hexose-phosphate:phosphate antiporter activity","termid":"GO:0015526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucose 6-phosphate:phosphate antiporter activity","secondary_identifiers":["Reactome:R-HSA-198513","RHEA:71535","MetaCyc:TRANS-RXN-33","GO:0008524","Reactome:R-HSA-3229118","Reactome:R-HSA-3257122"],"synonyms":[{"name":"glucose 6-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0061513"}


id: GO:0140643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + CoA + 2 NAD+ = 3-hydroxy-3-methylglutaryl-CoA + 2 NADH.","definition_xrefs":["RHEA:14833","PMID:29224355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA reductase (NADH) activity","secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN","EC:1.1.1.88","KEGG_REACTION:R02081"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase activity","type":"broad"},{"name":"HMG-CoA reductase activity","type":"broad"},{"name":"beta-hydroxy-beta-methylglutaryl CoA-reductase activity","type":"broad"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A reductase activity","type":"broad"},{"name":"hydroxymethylglutaryl coenzyme A reductase activity","type":"broad"}],"termid":"GO:0140643"}


id: PR:O74340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03079","PANTHER:PTHR22851:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.07c","secondary_identifiers":["UniProtKB:O74340"],"synonyms":[{"name":"Spom972h-DCAF13","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74340"}


id: PBO:0072663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4","termid":"PBO:0072663"}


id: MONDO:0008903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung cancer","secondary_identifiers":["ICD9:162.5","ICD9:162.9","DOID:1324","ICD9:162.3","OMIM:211980","UMLS:C0242379","NCIT:C7377","ICD9:162.4","ICD9:162.8","MEDGEN:66885","SCTID:363358000"],"synonyms":[{"name":"Nonsmall cell lung cancer","type":"related"},{"name":"adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"adenocarcinoma of lung, somatic","type":"exact"},{"name":"alveolar cell carcinoma","type":"related"},{"name":"cancer of lung","type":"exact"},{"name":"lung cancer","type":"exact"},{"name":"lung cancer, protection against","type":"related"},{"name":"lung cancer, protection against, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, resistance to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, somatic","type":"exact"},{"name":"lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung neoplasm","type":"related"},{"name":"malignant lung neoplasm","type":"exact"},{"name":"malignant lung tumor","type":"exact"},{"name":"malignant lung tumour","type":"exact"},{"name":"malignant neoplasm of lung","type":"exact"},{"name":"malignant neoplasm of the lung","type":"exact"},{"name":"malignant tumor of lung","type":"exact"},{"name":"malignant tumor of the lung","type":"exact"},{"name":"malignant tumour of lung","type":"exact"},{"name":"malignant tumour of the lung","type":"exact"},{"name":"nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"nonsmall cell lung cancer, somatic","type":"exact"},{"name":"nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0008903","xrefs":{"Monarch":{"xref_id":"0008903"}}}


id: PBO:0070038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1335, pseudogene","termid":"PBO:0070038"}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: GO:0019157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-malate + O2 = H2O2 + oxaloacetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete malate oxidase activity (obsolete GO:0019157)","synonyms":[{"name":"(S)-malate:oxygen oxidoreductase activity","type":"exact"},{"name":"FAD-dependent malate oxidase activity","type":"exact"},{"name":"malic dehydrogenase II","type":"related"},{"name":"malic oxidase activity","type":"exact"}],"termid":"GO:0019157"}


id: PBO:0058577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6514","termid":"PBO:0058577"}


id: PBO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030829"}


id: PR:O94318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03971","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.14c","secondary_identifiers":["UniProtKB:O94318"],"synonyms":[{"name":"Spom972h-CHMP6","type":"exact"}],"termid":"PR:O94318"}


id: PBO:0054615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2020","termid":"PBO:0054615"}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: GO:0042996
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042996","terms_by_termid":{"GO:0042997":null}}


id: SO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxywybutosine","secondary_identifiers":["RNAMOD:039"],"synonyms":[{"name":"OHyW","type":"exact"}],"termid":"SO:0001334"}


id: MOD:00099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-isoleucine amide.","definition_xrefs":["RESID:AA0090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine amide","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanamide","type":"exact"},{"name":"IleN","type":"exact"},{"name":"L-isoleucine amide","type":"exact"},{"name":"MOD_RES Isoleucine amide","type":"exact"},{"name":"amidated L-isoleucine","type":"exact"},{"name":"isoleucinamide","type":"exact"}],"termid":"MOD:00099"}


id: FYPO:0005735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased during mitotic M-phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to kinetochore during vegetative growth","termid":"FYPO:0003003"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to kinetochore during mitotic M phase","synonyms":[{"name":"increased protein localisation to kinetochore during mitosis","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic M phase","type":"related"},{"name":"increased protein localization to kinetochore during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005735"}


id: GO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-A RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-A RNA polymerase activity (obsolete GO:0001062)","termid":"GO:0001062"}


id: PBO:0055113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2532","termid":"PBO:0055113"}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: GO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates pyrimidine-containing compound salvage.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter (obsolete GO:0100068)","termid":"GO:0100068"}


id: PBO:0076947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDP-glucose 4,6-dehydratase","termid":"PBO:0076947"}


id: PBO:0082979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tryptophanyl-tRNA synthetase; aminoacylates tryptophanyl-tRNA; human homolog WARS can complement yeast null mutant","termid":"PBO:0082979"}


id: GO:0032153
data:
  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eventual plane of cell division (also known as cell cleavage or cytokinesis) in a dividing cell. In Eukaryotes, the cleavage apparatus, composed of septin structures and the actomyosin contractile ring, forms along this plane, and the mitotic, or meiotic, spindle is aligned perpendicular to the division plane. 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id: GO:0009496
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+[side 1] + 2 oxidized plastocyanin + plastoquinol-1 = 2 H+[side 2] + 2 reduced plastocyanin + plastoquinone. This reaction involves the concomitant transfer of 2 H+ ions across a membrane.","definition_xrefs":["RHEA:22148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor","termid":"GO:0052880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"plastoquinol--plastocyanin reductase activity","secondary_identifiers":["EC:7.1.1.6","MetaCyc:PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN","KEGG_REACTION:R03817"],"synonyms":[{"name":"cytochrome b6f","type":"narrow"},{"name":"cytochrome b6f complex activity","type":"related"},{"name":"plastoquinol-plastocyanin reductase activity","type":"related"},{"name":"plastoquinol/plastocyanin oxidoreductase activity","type":"related"},{"name":"plastoquinol:oxidized-plastocyanin oxidoreductase activity","type":"related"}],"termid":"GO:0009496"}


id: GO:0060877
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the otic epithelium in space to define an area or volume in which cells will differentiate to give rise to the semicircular canals.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization involved in semicircular canal formation","termid":"GO:0060877"}


id: GO:0035510
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alkyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA dealkylation","termid":"GO:0035510"}


id: PBO:0074422
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: GO:1990247
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  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117743],"is_not":false,"summary":null,"term":"GO:1990247"}]},"cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by N6-methyladenosine (m6A), a modification present at internal sites of mRNAs and some non-coding RNAs.","definition_xrefs":["PMID:22575960","PMID:24284625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"N6-methyladenosine-containing RNA reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N6-methyladenosine-containing RNA binding","type":"related"}],"termid":"GO:1990247","terms_by_termid":{"GO:1990247":null}}


id: GO:0005765
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole membrane","termid":"GO:0098852"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lysosomal membrane","synonyms":[{"name":"lysosome membrane","type":"exact"}],"termid":"GO:0005765"}


id: GO:1903106
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of insulin receptor signaling pathway involved in determination of adult lifespan.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:19853560","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1903106)","synonyms":[{"name":"activation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"activation of insulin receptor signalling pathway of determination of adult lifespan","type":"narrow"},{"name":"positive regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"positive regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"positive regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"up regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"up regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"up regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"up regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"up-regulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"up-regulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"up-regulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"up-regulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"},{"name":"upregulation of daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"upregulation of insulin receptor signaling pathway involved in determination of adult lifespan","type":"exact"},{"name":"upregulation of insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"upregulation of insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1903106"}


id: PBO:0050473
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A1","termid":"PBO:0050473"}


id: PBO:0117035
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALRD1 antisense RNA 1","termid":"PBO:0117035"}


id: GO:0070058
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tRNA genes, which are not linearly connected on the chromosome, are transported in three dimensions to, and maintained together in, the nucleolus. This clustered positioning leads to transcriptional silencing of nearby RNA polymerase II promoters (termed tRNA gene mediated (tgm) silencing) in S. cerevisiae.","definition_xrefs":["PMID:18708579","GOC:jh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA gene clustering","termid":"GO:0070058"}


id: GO:0008641
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  {"annotated_genes":["SJAG_03950","SJAG_02082","SJAG_03896","SJAG_05032","SJAG_00645","SJAG_00853","SJAG_00878","SJAG_02084","SJAG_00604"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71310],"is_not":false,"summary":null,"term":"GO:0008641"},{"annotations":[75189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[75190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[73120,81468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[77330,95707,97266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[75675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[75959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like modifier activating enzyme activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008642"],"synonyms":[{"name":"small protein activating enzyme activity","type":"narrow"}],"termid":"GO:0008641","terms_by_termid":{"GO:0004839":null,"GO:0008641":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0042292":null}}


id: PBO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/km 0.46","termid":"PBO:0003058"}


id: GO:0102980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-butyl-4-hydroxy-5-methyl-3(2H)-furanone + NADP = (2E)-2-butylidene-4-hydroxy-5-methyl-3(2H)-furanone + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-butyl-4-hydroxy-5-methyl-3(2H)-furanoneoxidoreductase activity (obsolete GO:0102980)","termid":"GO:0102980"}


id: GO:0098543
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from another organism is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of other organism","secondary_identifiers":["GO:0051824"],"synonyms":[{"name":"recognition of other organism during symbiotic interaction","type":"narrow"},{"name":"recognition of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0098543"}


id: PBO:0088398
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx3","termid":"PBO:0088398"}


id: PBO:0065688
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 4 pseudogene","termid":"PBO:0065688"}


id: PBO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 13","termid":"PBO:0071984"}


id: PBO:0072117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 6","termid":"PBO:0072117"}


id: GO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the heart septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart chamber septation","termid":"GO:0003200"}


id: MONDO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cascade stomach","secondary_identifiers":["UMLS:C0267183","ICD9:537.6","MEDGEN:540460","SCTID:54051005","DOID:12234"],"synonyms":[{"name":"hourglass stricture or stenosis of stomach","type":"exact"}],"termid":"MONDO:0001469","xrefs":{"Monarch":{"xref_id":"0001469"}}}


id: MONDO:0019772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharospasm-oromandibular dystonia, also called Meige dystonia or Meige syndrome is a focal dystonia involving symmetrical benign essential blepharospasm (BEB) and oromandibular dystonia.","definition_xrefs":["Orphanet:93964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"blepharospasm-oromandibular dystonia syndrome","secondary_identifiers":["DOID:3982","MEDGEN:44341","NORD:1425","GARD:7008","MESH:D008538","UMLS:C0025183","SCTID:230325003"],"synonyms":[{"name":"Brueghel syndrome","type":"related"},{"name":"Meige Syndrome","type":"exact"},{"name":"Meige dystonia","type":"exact"},{"name":"Meige syndrome","type":"exact"},{"name":"Meige's syndrome","type":"related"},{"name":"blepharospasm - oromandibular dystonia","type":"related"},{"name":"blepharospasm-oromandibular dystonia","type":"related"},{"name":"idiopathic blepharospasm-oromandibular dystonia syndrome","type":"related"},{"name":"oral facial dystonia","type":"related"},{"name":"segmental cranial dystonia","type":"related"}],"termid":"MONDO:0019772","xrefs":{"Monarch":{"xref_id":"0019772"}}}


id: MONDO:0014434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS5-related ciliopathy","termid":"MONDO:1040047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","secondary_identifiers":["GARD:10204","OMIM:615983","MEDGEN:856141","UMLS:C3892039","DOID:0110127"],"synonyms":[{"name":"BBS5","type":"exact"},{"name":"BBS5 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 5","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS5","type":"exact"},{"name":"Bardet-Biedl syndrome type 5","type":"exact"}],"termid":"MONDO:0014434","xrefs":{"Monarch":{"xref_id":"0014434"}}}


id: GO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism activates or increases the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"},{"relation_name":"positively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral transcription","synonyms":[{"name":"positive regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043923"}


id: GO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process whereby karyomere membranes fuse during interphase to form a single lobed nucleus.","definition_xrefs":["GOC:dph","PMID:2734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"karyomere membrane fusion","termid":"GO:0061472"}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: PBO:0040639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 pseudogene 1","termid":"PBO:0040639"}


id: MONDO:0024251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological syndrome caused by severe mercury poisoning.","definition_xrefs":["Wikipedia:Minamata_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mercury poisoning","termid":"MONDO:0018020"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minamata disease","secondary_identifiers":["MEDGEN:43368","UMLS:C0086626","SCTID:39640004"],"synonyms":[{"name":"Chisso-Minamata disease","type":"exact"}],"termid":"MONDO:0024251","xrefs":{"Monarch":{"xref_id":"0024251"}}}


id: PBO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase Cys12","termid":"PBO:0000983"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: GO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a microglial cell.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}


id: PBO:0046865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 2C, pseudogene","termid":"PBO:0046865"}


id: PBO:0051962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRIP antisense RNA 1","termid":"PBO:0051962"}


id: GO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of glucosinolate biosynthetic process","termid":"GO:0010439"}


id: _global:causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"precedes","termid":"_global:precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of","secondary_identifiers":["RO:0002411"],"termid":"_global:causally_upstream_of"}


id: PBO:0051118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-3 (pseudogene)","termid":"PBO:0051118"}


id: FYPO:0008089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion fusion is abnormal.","definition_xrefs":["PMID:37590302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrial fusion","termid":"FYPO:0008089"}


id: PBO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 1","termid":"PBO:0061693"}


id: GO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Saccharomyces) (obsolete GO:0000206)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000206"}


id: GO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class I molecule. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:16181335","GOC:add","PMID:15771591","PMID:15224093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","termid":"GO:0042590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent","secondary_identifiers":["Reactome:R-HSA-1236973","Reactome:R-HSA-1236974","Reactome:R-HSA-1236978"],"synonyms":[{"name":"TAP-dependent antigen processing and presentation of exogenous peptide antigen via MHC class I","type":"exact"},{"name":"TAP-dependent exogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I, TAP-dependent","type":"exact"}],"termid":"GO:0002479"}


id: MONDO:0006996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute onset of severe, life-threatening hyperthyroidism caused by a sudden release of excessive thyroid hormone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid crisis","secondary_identifiers":["UMLS:C0040127","MEDGEN:11813","HP:0011782","DOID:12837","ICD9:242.81","EFO:1001212","MESH:D013958","NCIT:C112836","icd11.foundation:1215823328","ICD9:242.91","MedDRA:10043705","SCTID:29028009"],"synonyms":[{"name":"thyroid crisis","type":"exact"},{"name":"thyroid crisis (disease)","type":"exact"},{"name":"thyroid storm","type":"exact"},{"name":"thyrotoxic crisis","type":"exact"}],"termid":"MONDO:0006996","xrefs":{"Monarch":{"xref_id":"0006996"}}}


id: PBO:0087283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors the alpha subunit, Srp101p to the ER membrane","termid":"PBO:0087283"}


id: PBO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor","termid":"PBO:0061130"}


id: PBO:0068971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 215, pseudogene","termid":"PBO:0068971"}


id: PBO:0074456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 1","termid":"PBO:0074456"}


id: MONDO:0012083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GRHL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 28","secondary_identifiers":["OMIM:608641","MEDGEN:324846","UMLS:C1837640","DOID:0110557","GARD:18124","MESH:C563890"],"synonyms":[{"name":"DFNA28","type":"narrow"},{"name":"GRHL2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GRHL2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 28","type":"narrow"},{"name":"deafness, autosomal dominant 28","type":"narrow"},{"name":"deafness, autosomal dominant type 28","type":"narrow"}],"termid":"MONDO:0012083","xrefs":{"Monarch":{"xref_id":"0012083"}}}


id: PBO:0086742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible","termid":"PBO:0086742"}


id: PBO:0065224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR5-ARHGAP8 readthrough","termid":"PBO:0065224"}


id: PBO:0082685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; involved in localization of actin and chitin; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082685"}


id: PBO:0077812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2 pseudogene 1","termid":"PBO:0077812"}


id: GO:0033922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing N-acetylmuramic residues.","definition_xrefs":["EC:3.2.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan beta-N-acetylmuramidase activity","secondary_identifiers":["MetaCyc:3.2.1.92-RXN"],"synonyms":[{"name":"beta-2-acetamido-3-O-(D-1-carboxyethyl)-2-deoxy-D-glucoside acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"exo-beta-N-acetylmuramidase activity","type":"related"},{"name":"exo-beta-acetylmuramidase activity","type":"related"},{"name":"peptidoglycan beta-N-acetylmuramoylexohydrolase activity","type":"related"}],"termid":"GO:0033922"}


id: PBO:0089524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase, adducin Mta3","termid":"PBO:0089524"}


id: GO:1903702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","ISBN:0-683-40008-8","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"esophagus development","synonyms":[{"name":"esophageal development","type":"exact"},{"name":"gullet development","type":"exact"},{"name":"oesophagus development","type":"exact"}],"termid":"GO:1903702"}


id: GO:1900818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ochratoxin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ochratoxin A metabolic process","termid":"GO:1900816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"ochratoxin A biosynthetic process","synonyms":[{"name":"Ochratoxin A anabolism","type":"exact"},{"name":"Ochratoxin A biosynthesis","type":"exact"},{"name":"Ochratoxin A formation","type":"exact"},{"name":"Ochratoxin A synthesis","type":"exact"}],"termid":"GO:1900818"}


id: GO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ornithine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ornithine transmembrane import into vacuole","synonyms":[{"name":"vacuolar ornithine import","type":"related"}],"termid":"GO:0090455"}


id: PBO:0039270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate B","termid":"PBO:0039270"}


id: PBO:0085947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; N-terminally propionylated in vivo; deletion mutant is viable","termid":"PBO:0085947"}


id: PR:O74455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconolactonase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04412","PRO:DNx","PANTHER:PTHR11054:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.10","secondary_identifiers":["UniProtKB:O74455"],"synonyms":[{"name":"6PGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGLS","type":"exact"}],"termid":"PR:O74455"}


id: PBO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 4","termid":"PBO:0046623"}


id: MOD:00245
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks a glycine residue and an L-serine residue to form glycine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8895467","PubMed:8183941","RESID:AA0240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine oxazole-4-carboxylic acid","synonyms":[{"name":"2-aminomethyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-azanylmethyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Gly-Ser)","type":"exact"},{"name":"glycine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00245"}


id: PBO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 22","termid":"PBO:0044444"}


id: PBO:0072524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 53","termid":"PBO:0072524"}


id: GO:0060896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate pattern specification","secondary_identifiers":["Reactome:R-HSA-9834899"],"termid":"GO:0060896"}


id: GO:0034755
data:
  {"annotated_genes":["SJAG_04867","SJAG_04737","SJAG_02457","SJAG_02473","SJAG_01007","SJAG_04260","SJAG_02968","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62180,77523,79709],"is_not":false,"summary":null,"term":"GO:0034755"},{"annotations":[72023,97585,113385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[112802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","PMID:11390404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"iron ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0000040","GO:0006827","GO:0061839","GO:1903874"],"synonyms":[{"name":"ferrous ion transmembrane transport","type":"narrow"},{"name":"ferrous iron transmembrane transport","type":"narrow"},{"name":"high affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high affinity iron ion transport","type":"narrow"},{"name":"high-affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transport","type":"narrow"},{"name":"iron ion membrane transport","type":"exact"},{"name":"iron(2+) transmembrane transport","type":"narrow"},{"name":"low affinity iron ion transport","type":"narrow"},{"name":"low-affinity iron ion transmembrane transport","type":"narrow"},{"name":"low-affinity iron ion transport","type":"narrow"},{"name":"transmembrane iron transport","type":"exact"}],"termid":"GO:0034755","terms_by_termid":{"GO:0034755":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: GO:1990238
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a double-stranded DNA molecule by creating internal breaks.","definition_xrefs":["PMID:22885404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"double-stranded DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA endodeoxyribonuclease activity","type":"exact"},{"name":"dsDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:1990238","terms_by_termid":{"GO:0106332":null}}


id: PBO:0053230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 6","termid":"PBO:0053230"}


id: GO:0046910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of pectinesterase.","definition_xrefs":["GOC:ai","PMID:10880981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140678","GO:0004857"],"is_obsolete":false,"name":"pectinesterase inhibitor activity","termid":"GO:0046910"}


id: PBO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 5 pseudogene 1","termid":"PBO:0047533"}


id: GO:0052906
data:
  {"annotated_genes":["SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68298],"is_not":false,"summary":null,"term":"GO:0052906"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(37) in tRNA = N(1)-methylguanine(37) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0016741","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"tRNA (guanine(37)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-12458","RHEA:36899","Reactome:R-HSA-6782859"],"synonyms":[{"name":"tRNA (guanine(37)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(37)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(37)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)G(37)) methyltransferase activity","type":"related"},{"name":"tRNA-(N(1)G37) methyltransferase activity","type":"related"},{"name":"transfer RNA (m(1)G(37)) methyltransferase activity","type":"related"}],"termid":"GO:0052906","terms_by_termid":{"GO:0052906":null}}


id: FYPO:0007961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the spindle length decreases abruptly at anaphase onset.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320","FYPO:0000631","FYPO:0000054","FYPO:0000337"],"is_obsolete":false,"name":"transient abrupt spindle length decrease at anaphase onset","termid":"FYPO:0007961"}


id: PR:O13861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tcd1 gene.","definition_xrefs":["UniProtKB:O13861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.10","synonyms":[{"name":"Spom972h-tcd1","type":"exact"},{"name":"t(6)A37 dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13861"}


id: GO:1904017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroglobulin triiodothyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:7531505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Thyroglobulin triiodothyronine","termid":"GO:1904016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Thyroglobulin triiodothyronine","termid":"GO:1904017"}


id: SO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where the data is minimally filtered or un-filtered, from any number of sequencing platforms, and is assembled into contigs. Genome sequence of this quality may harbour regions of poor quality and can be relatively incomplete.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"standard_draft","synonyms":[{"name":"standard draft","type":"exact"}],"termid":"SO:0001486"}


id: PBO:0029925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0029925"}


id: PBO:0049291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 10, pseudogene","termid":"PBO:0049291"}


id: GO:0097633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of phagophore assembly site membrane (obsolete GO:0097633)","synonyms":[{"name":"intrinsic to phagophore assembly site membrane","type":"narrow"}],"termid":"GO:0097633"}


id: GO:0033063
data:
  {"annotated_genes":["SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80332],"is_not":false,"summary":null,"term":"GO:0033063"}]},"cv_name":"cellular_component","definition":"A DNA recombinase mediator complex that contains the Rad51 paralogs RAD51B, RAD51C, RAD51D, and XRCC2, or orthologs thereof.","definition_xrefs":["PMID:17114795","PMID:16093548","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Rad51B-Rad51C-Rad51D-XRCC2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"BCDX2 complex","type":"exact"}],"termid":"GO:0033063","terms_by_termid":{"GO:0033063":null}}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete eriodictyol 2-hydroxylase activity (obsolete GO:0102472)","termid":"GO:0102472"}


id: MONDO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin condition caused by Mycobacterium marinum, characterized by a skin lesion that presents roughly three weeks after exposure.","definition_xrefs":["Wikipedia:Aquarium_granuloma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquarium granuloma","secondary_identifiers":["UMLS:C0275708","MEDGEN:78814","MESH:C535526","SCTID:240417004"],"synonyms":[{"name":"M. marinum","type":"related"},{"name":"Mycobacterium marinum caused skin disease","type":"exact"},{"name":"Mycobacterium marinum infection","type":"related"},{"name":"Mycobacterium marinum skin disease","type":"exact"},{"name":"aquarium granuloma","type":"exact"},{"name":"fish tank granuloma","type":"exact"},{"name":"swimming pool granuloma","type":"related"}],"termid":"MONDO:0043314","xrefs":{"Monarch":{"xref_id":"0043314"}}}


id: MONDO:0012776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 7","secondary_identifiers":["UMLS:C2677607","MEDGEN:394328","OMIM:612005"],"synonyms":[{"name":"CELIAC7","type":"exact"},{"name":"celiac disease, susceptibility to, 7","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 7","type":"related"}],"termid":"MONDO:0012776","xrefs":{"Monarch":{"xref_id":"0012776"}}}


id: PBO:0079005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 5-1","termid":"PBO:0079005"}


id: MONDO:0020513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of seminoma characterized by the presence of three cell types: round cells with eosinophilic cytoplasm, small cells with dark nucleus and a small amount of cytoplasm, and mono-or multinucleated giant cells. The neoplastic cells are not cohesive. There is an edematous stroma present; lymphocytic infiltrates are rarely seen. Most patients are older males.","definition_xrefs":["NCIT:C39921"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete spermatocytoma (obsolete MONDO:0003667)","termid":"MONDO:0003667"},{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spermatocytic seminoma","secondary_identifiers":["Orphanet:99865","MEDGEN:83159","DOID:7891","ICDO:9063/3","DOID:5834","UMLS:C0334517","GARD:16921"],"synonyms":[{"name":"spermatocytic seminoma","type":"exact"},{"name":"spermatocytoma","type":"related"},{"name":"testicular spermatocytic seminoma","type":"exact"}],"termid":"MONDO:0020513","xrefs":{"Monarch":{"xref_id":"0020513"}}}


id: PBO:0013027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CMD1","termid":"PBO:0013027"}


id: MONDO:0019586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of nonsyndromic deafness.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"},{"relation_name":"is_a","term_name":"X-linked deafness","termid":"MONDO:0020768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"X-linked nonsyndromic hearing loss","secondary_identifiers":["MEDGEN:1825990","Orphanet:90625","DOID:0050566","UMLS:C5680192","GARD:16790"],"synonyms":[{"name":"X-linked deafness","type":"narrow"},{"name":"X-linked isolated neurosensory deafness type DFN","type":"narrow"},{"name":"X-linked isolated neurosensory hearing loss type DFN","type":"exact"},{"name":"X-linked isolated sensorineural deafness type DFN","type":"narrow"},{"name":"X-linked isolated sensorineural hearing loss type DFN","type":"exact"},{"name":"X-linked non-syndromic neurosensory deafness type DFN","type":"narrow"},{"name":"X-linked non-syndromic neurosensory hearing loss type DFN","type":"exact"},{"name":"X-linked non-syndromic sensorineural deafness type DFN","type":"narrow"},{"name":"X-linked non-syndromic sensorineural hearing loss type DFN","type":"exact"},{"name":"X-linked nonsyndromic deafness","type":"narrow"},{"name":"X-linked nonsyndromic genetic deafness","type":"narrow"},{"name":"nonsyndromic deafness, X-linked","type":"narrow"},{"name":"nonsyndromic genetic deafness, X-linked","type":"narrow"}],"termid":"MONDO:0019586","xrefs":{"Monarch":{"xref_id":"0019586"}}}


id: PATO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to not shed any body part.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-deciduous (any body part)","termid":"PATO:0001732"}


id: PBO:0048799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAS complex locus","termid":"PBO:0048799"}


id: MONDO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prolymphocytic leukemia that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"splenic manifestation of leukemia","termid":"MONDO:0004107"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"splenic manifestation of prolymphocytic leukemia","secondary_identifiers":["DOID:4334","MEDGEN:277663","NCIT:C7297","UMLS:C1336066"],"synonyms":[{"name":"prolymphocytic leukaemia of spleen","type":"exact"},{"name":"prolymphocytic leukemia of spleen","type":"exact"},{"name":"spleen prolymphocytic leukaemia","type":"exact"},{"name":"spleen prolymphocytic leukemia","type":"exact"},{"name":"splenic manifestation of prolymphocytic leukemia","type":"exact"}],"termid":"MONDO:0002966","xrefs":{"Monarch":{"xref_id":"0002966"}}}


id: GO:0015795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sorbitol across a membrane. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"sorbitol transmembrane transport","synonyms":[{"name":"glucitol transport","type":"exact"},{"name":"sorbitol transport","type":"broad"}],"termid":"GO:0015795"}


id: PR:O74434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug174 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 174 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.03c","synonyms":[{"name":"Spom972h-mug174","type":"exact"}],"termid":"PR:O74434"}


id: _global:has_penetrance
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed penetrance in a population. Penetrance is the proportion of individuals carrying an allele that express a trait associated with the allele.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_penetrance","synonyms":[{"name":"penetrance","type":"exact"}],"termid":"_global:has_penetrance"}


id: PBO:0068358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 139","termid":"PBO:0068358"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: PBO:0072128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 5","termid":"PBO:0072128"}


id: PBO:0084380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation; regulated by nonsense-mediated mRNA decay pathway","termid":"PBO:0084380"}


id: PBO:0049319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GS homeobox 1","termid":"PBO:0049319"}


id: PBO:0078752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 13 homolog","termid":"PBO:0078752"}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: PBO:0056376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 3","termid":"PBO:0056376"}


id: MONDO:1011893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodegenerative vacuolar storage disease, non-human animal","secondary_identifiers":["OMIA:001954"],"termid":"MONDO:1011893","xrefs":{"Monarch":{"xref_id":"1011893"}}}


id: GO:0015840
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of urea into, out of or within the cell. Urea is the water-soluble compound H2N-CO-NH2.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"urea transport","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0015840","terms_by_termid":{"GO:0071918":null}}


id: PBO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Rna1","termid":"PBO:0002811"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: PBO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 5","termid":"PBO:0070470"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["GOC:rz","PMID:20805556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: GO:0072087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal vesicle over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"nephron epithelium development","termid":"GO:0072009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle development","termid":"GO:0072087"}


id: PR:Q9US04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyltranspeptidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.09","secondary_identifiers":["UniProtKB:Q9US04"],"synonyms":[{"name":"Spom972h-GGT1","type":"exact"},{"name":"gamma-glutamyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US04"}


id: PBO:0058594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6726","termid":"PBO:0058594"}


id: PBO:0034556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule-based_movement","termid":"PBO:0034556"}


id: PBO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7","termid":"PBO:0042271"}


id: PBO:0026669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase_transition","termid":"PBO:0026669"}


id: PR:P56329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23001:SF3","PRO:DNx","OMA:SCHPO01020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.04c","secondary_identifiers":["UniProtKB:P56329"],"synonyms":[{"name":"Spom972h-EIF2S2","type":"exact"},{"name":"eIF-2-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56329"}


id: MONDO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 9","termid":"MONDO:0016930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 9","secondary_identifiers":["UMLS:C5679702","MEDGEN:1826034","GARD:20880","Orphanet:262905"],"synonyms":[{"name":"partial duplication of chromosome 9q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 9","type":"exact"},{"name":"partial trisomy of chromosome 9q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 9","type":"exact"}],"termid":"MONDO:0016960","xrefs":{"Monarch":{"xref_id":"0016960"}}}


id: MONDO:0019481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular dendritic cell sarcoma (obsolete MONDO:0019481)","termid":"MONDO:0019481","xrefs":{"Monarch":{"xref_id":"0019481"}}}


id: PBO:0065310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 30, pseudogene","termid":"PBO:0065310"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: PBO:0038354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_effector_activity","termid":"PBO:0038354"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: MONDO:0015723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 12p is an extremely rare chromosomal disorder (over 30 cases reported worldwide) characterized by craniofacial malformations (round face, prominent cheeks, high bulging forehead, broad and flat nasal bridge, short nose with anteverted nostrils, long philtrum, prominent and everted lower lip, low-set ears, abnormally folded helix, protuberant antihelix), postnatal growth retardation, mental and psychomotor retardation, generalized hypotonia, abnormally short wide hands and/or other abnormalities.","definition_xrefs":["Orphanet:1699"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 12","termid":"MONDO:0016933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 12p","secondary_identifiers":["MEDGEN:162880","MESH:C538299","GARD:5305","UMLS:C0795845"],"synonyms":[{"name":"12p duplication","type":"related"},{"name":"12p trisomy","type":"related"},{"name":"Duplication 12p","type":"exact"},{"name":"chromosome 12p duplication","type":"related"},{"name":"partial trisomy 12p","type":"related"},{"name":"trisomy type 12p","type":"exact"}],"termid":"MONDO:0015723","xrefs":{"Monarch":{"xref_id":"0015723"}}}


id: PBO:0090638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain","termid":"PBO:0090638"}


id: GO:1902343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:23770568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltose transport","termid":"GO:1902343"}


id: GO:0033409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"UAU codon-amino acid adaptor activity","synonyms":[{"name":"TAT codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033409"}


id: PBO:0066109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 1","termid":"PBO:0066109"}


id: PBO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member D, pseudogene","termid":"PBO:0047977"}


id: MONDO:0019064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary spastic paraplegias (HSP) comprise a genetically and clinically heterogeneous group of neurodegenerative disorders characterized by progressive spasticity and hyperreflexia of the lower limbs.","definition_xrefs":["Orphanet:685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraplegia","termid":"MONDO:0003757"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia","secondary_identifiers":["MESH:D015419","OMIMPS:303350","SCTID:39912006","ICD10CM:G11.4","ICD9:334.1","GARD:6637","NCIT:C140267","UMLS:C0037773","MedDRA:10019903","MEDGEN:20844","NANDO:1200052","icd11.foundation:810807375","DOID:2476","NORD:1238"],"synonyms":[{"name":"FSP","type":"related"},{"name":"French settlement disease","type":"exact"},{"name":"HSP","type":"exact"},{"name":"SPG","type":"exact"},{"name":"Strumpell-Lorrain disease","type":"exact"},{"name":"Strümpell-Lorrain disease","type":"exact"},{"name":"familial spastic paraparesis","type":"related"},{"name":"familial spastic paraplegia","type":"exact"},{"name":"hereditary spastic paraparesis","type":"exact"},{"name":"spastic paraplegia","type":"broad"}],"termid":"MONDO:0019064","xrefs":{"Monarch":{"xref_id":"0019064"}}}


id: MONDO:0021047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, malignant, or borderline circumscribed biphasic neoplasm that arises from the breast. It usually affects middle-aged women. It is characterized by the presence of a double layer of epithelial cells that are arranged in clefts, surrounded by a spindle cell mesenchymal (stromal) component.","definition_xrefs":["NCIT:C7575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllodes tumor","termid":"MONDO:0005078"},{"relation_name":"is_a","term_name":"breast fibroepithelial neoplasm","termid":"MONDO:0021046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast phyllodes tumor","secondary_identifiers":["ONCOTREE:PT","UMLS:C0238031","SCTID:712989008","MEDGEN:65943"],"synonyms":[{"name":"breast cystosarcoma phyllodes","type":"exact"},{"name":"breast phyllodes neoplasm","type":"exact"},{"name":"breast phyllodes tumor","type":"exact"},{"name":"cystosarcoma phyllodes of breast","type":"exact"},{"name":"cystosarcoma phyllodes of the breast","type":"exact"},{"name":"cystosarcoma phylloides - breast","type":"exact"},{"name":"cystosarcoma phylloides of the breast","type":"exact"},{"name":"phyllodes breast neoplasm","type":"exact"},{"name":"phyllodes breast tumor","type":"exact"},{"name":"phyllodes breast tumour","type":"exact"},{"name":"phyllodes neoplasm of breast","type":"exact"},{"name":"phyllodes neoplasm of the breast","type":"exact"},{"name":"phyllodes tumor of breast","type":"exact"},{"name":"phyllodes tumor of the breast","type":"exact"},{"name":"phyllodes tumour of breast","type":"exact"},{"name":"phyllodes tumour of the breast","type":"exact"}],"termid":"MONDO:0021047","xrefs":{"Monarch":{"xref_id":"0021047"}}}


id: PBO:0085336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoenolpyruvate carboxykinase; key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol","termid":"PBO:0085336"}


id: MOD:00672
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-acylated residue","synonyms":[{"name":"SAcylRes","type":"exact"}],"termid":"MOD:00672"}


id: GO:0072257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}


id: PBO:0058247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4535","termid":"PBO:0058247"}


id: PBO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm2","termid":"PBO:0090410"}


id: GO:0014071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloalkane stimulus. A cycloalkane is a cyclic saturated hydrocarbon having the general formula CnH2n.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cycloalkane","termid":"GO:0014071"}


id: PBO:0084559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Dpi29p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with nascent polypeptide chains; interacts with Mdm38p and may recruit mRNA-specific translational activators to the mitoribosome; null mutant displays decreased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084559"}


id: MONDO:0013410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 6","secondary_identifiers":["OMIM:613762","UMLS:C3151064","GARD:15703","MEDGEN:462414","DOID:0111769"],"synonyms":[{"name":"46,XY SEX reversal 6","type":"related"},{"name":"46,XY Sex reversal type 6","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Map3K1-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, Map3K1-related","type":"related"},{"name":"46,XY sex reversal 6","type":"exact"},{"name":"46XY sex reversal 6","type":"exact"},{"name":"SRXY6","type":"related"}],"termid":"MONDO:0013410","xrefs":{"Monarch":{"xref_id":"0013410"}}}


id: GO:1905758
data:
  {"annotated_genes":["SJAG_04776","SJAG_04666","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86979,91894,93895],"is_not":false,"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27898700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"positively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"positive regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905758","terms_by_termid":{"GO:1905758":null}}


id: PBO:0085435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) polymerase; one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs; required for gene looping","termid":"PBO:0085435"}


id: GO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the membrane attack complex components of the complement cascade which can result in death of a target cell through cytolysis.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of membrane attack complex","synonyms":[{"name":"MAC assembly","type":"exact"},{"name":"MAC formation","type":"exact"},{"name":"activation of MAC","type":"exact"},{"name":"activation of TCC","type":"narrow"},{"name":"activation of terminal complement complex","type":"narrow"},{"name":"activation of the terminal complement cascade","type":"narrow"},{"name":"membrane attack complex assembly","type":"exact"},{"name":"membrane attack complex formation","type":"exact"}],"termid":"GO:0001905"}


id: GO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane in a PEX19-independent manner.","definition_xrefs":["PMID:17020786","GOC:pm","PMID:14709540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome membrane targeting sequence binding","termid":"GO:0033328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peroxisome membrane class-2 targeting sequence binding","synonyms":[{"name":"PEX19-independent mPTS binding","type":"related"},{"name":"class 2 mPTS binding","type":"exact"}],"termid":"GO:0036106"}


id: PR:Q9USQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC577.11 gene.","definition_xrefs":["UniProtKB:Q9USQ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C577.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.11","synonyms":[{"name":"Spom972h-SPBC577.11","type":"exact"}],"termid":"PR:Q9USQ8"}


id: GO:1990393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, at least composed of CUL7, CCDC8 and OBSL1, that is required for maintaining microtubule and genome integrity.","definition_xrefs":["PMID:24793695","PMID:24793696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3M complex","termid":"GO:1990393"}


id: PBO:0063044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PALLD antisense RNA 1","termid":"PBO:0063044"}


id: MONDO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, locally aggressive, malignant neoplasm of the hair follicle. The majority of the cases arise de novo, however malignant transformation from a pre-existing pilomatricoma has been reported. It usually presents as a solitary nodule in the head and neck, upper extremities, or buttocks. Morphologically, it is characterized by the presence of aggregates of basaloid cells infiltrating the dermis. Masses of ghost cells are present in the cellular aggregates. Complete surgical excision is the treatment of choice. If it is not completely removed, it usually recurs, but it rarely metastasizes to distant anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"skin appendage carcinoma","termid":"MONDO:0006973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin pilomatrix carcinoma","secondary_identifiers":["DOID:5376","MEDGEN:108439","UMLS:C0585475","NCIT:C4114","ICDO:8110/3","GARD:22042","SCTID:307610008","Orphanet:499182"],"synonyms":[{"name":"Pilomatrical carcinoma","type":"exact"},{"name":"Trichomatrical carcinoma","type":"exact"},{"name":"calcified epithelial carcinoma of Malherbe","type":"exact"},{"name":"calcifying epitheliocarcinoma","type":"exact"},{"name":"invasive pilomatrixoma","type":"exact"},{"name":"malignant pilomatricoma","type":"exact"},{"name":"matrical carcinoma","type":"exact"},{"name":"pilomatricoma, malignant","type":"exact"},{"name":"pilomatrix carcinoma","type":"exact"},{"name":"pilomatrix carcinoma of skin","type":"exact"},{"name":"pilomatrix carcinoma of the skin","type":"exact"},{"name":"pilomatrix skin carcinoma","type":"exact"}],"termid":"MONDO:0003414","xrefs":{"Monarch":{"xref_id":"0003414"}}}


id: MONDO:0034979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare congenital optic disk excavation characterized by deep fundus excavation of chorioretinal atrophy surrounding a relatively normal appearing optic disk. Retinal vasculature is normal, and retinochoroidal coloboma and glial anomalies are absent. Patients present with mostly unilateral markedly reduced visual acuity. Association with other congenital defects or systemic diseases is uncommon. [Orphanet:519400]","definition_xrefs":["Orphanet:519400"],"gene_count":0,"genotype_count":0,"name":"obsolete peripapillary staphyloma (obsolete MONDO:0034979)","secondary_identifiers":["ICD10CM:Q14.2"],"termid":"MONDO:0034979","xrefs":{"Monarch":{"xref_id":"0034979"}}}


id: GO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory synapse","secondary_identifiers":["Wikipedia:Excitatory_synapse"],"termid":"GO:0060076"}


id: PBO:0075921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 13","termid":"PBO:0075921"}


id: GO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of four asymmetric divisions undergone by the sensory organ precursor cells to generate cells that have distinct cell fates. For example, in the external sensory organ, the precursor cells give rise to one multidendritic neuron and four additional cells (the socket, shaft, sheath cells and the external sense neuron).","definition_xrefs":["PMID:11171389","PMID:18295597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell division","synonyms":[{"name":"sense organ precursor cell division","type":"exact"}],"termid":"GO:0045035"}


id: PATO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of being a particular point in the time of a cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phase","termid":"PATO:0000083"}


id: PBO:0084278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0084278"}


id: PBO:0072289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 7","termid":"PBO:0072289"}


id: MONDO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of alphaB-cristallin","secondary_identifiers":["GARD:20427","UMLS:C5680838","Orphanet:209044","MEDGEN:1843314"],"termid":"MONDO:0016188","xrefs":{"Monarch":{"xref_id":"0016188"}}}


id: FYPO:0007669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, has a larger volume than normal, and undergoes one or more rounds of rereplication of the entire genome. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PMID:8121488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"viable swollen vegetative cell with complete DNA rereplication","synonyms":[{"name":"viable enlarged vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable large vegetative cell with complete DNA rereplication","type":"related"},{"name":"viable swollen cell with complete DNA rereplication during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell with abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","type":"exact"},{"name":"viable swollen vegetative cell with complete DNA rereplication during mitotic cell cycle","type":"related"},{"name":"viable swollen vegetative cell with increased ploidy","type":"exact"},{"name":"viable vegetative cell with increased cell size and complete DNA rereplication","type":"related"},{"name":"viable vegetative cell with increased cell volume and complete DNA rereplication","type":"exact"}],"termid":"FYPO:0007669"}


id: MONDO:0016223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile hemangioma of rare localization","secondary_identifiers":["MEDGEN:825458","SCTID:703270004","Orphanet:210589","GARD:20453","UMLS:C3839613"],"termid":"MONDO:0016223","xrefs":{"Monarch":{"xref_id":"0016223"}}}


id: PR:Q10283
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-hydroxy-3-methylglutaryl-coenzyme A reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10572:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-coenzyme A reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.09c","secondary_identifiers":["UniProtKB:Q10283"],"synonyms":[{"name":"HMG-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC162.09c","type":"related"},{"name":"Spom972h-HMGCR","type":"exact"},{"name":"its12","type":"related"}],"termid":"PR:Q10283"}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: PBO:0043389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 3","termid":"PBO:0043389"}


id: PBO:0041916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 4 precursor","termid":"PBO:0041916"}


id: GO:0036343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that combines cognitive functions and physical movement. For example, driving a car, throwing a ball, or playing a musical instrument.","definition_xrefs":["PMID:17159989","GOC:nhn","GOC:pr","Wikipedia:Psychomotor_learning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor behavior","termid":"GO:0061744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"psychomotor behavior","termid":"GO:0036343"}


id: GO:0106135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"}


id: MONDO:0025061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute disease of young pigs that is usually associated with weaning. It is characterized clinically by paresis and subcutaneous edema.","definition_xrefs":["MESH:D004488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edema disease of swine","synonyms":[{"name":"swine edema disease","type":"related"},{"name":"swine edema diseases","type":"related"},{"name":"swine oedema disease","type":"related"},{"name":"swine oedema diseases","type":"related"}],"termid":"MONDO:0025061","xrefs":{"Monarch":{"xref_id":"0025061"}}}


id: CHEBI:28939
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-cysteine","termid":"CHEBI:28939"}


id: PBO:0062052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily V member 2","termid":"PBO:0062052"}


id: PBO:0064755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 91","termid":"PBO:0064755"}


id: PBO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR36","termid":"PBO:0003836"}


id: PBO:0047599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1A","termid":"PBO:0047599"}


id: PBO:0055849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1","termid":"PBO:0055849"}


id: GO:0045594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cumulus cell differentiation","synonyms":[{"name":"activation of cumulus cell differentiation","type":"narrow"},{"name":"positive regulation of ovarian cumulus cell differentiation","type":"exact"},{"name":"stimulation of cumulus cell differentiation","type":"narrow"},{"name":"up regulation of cumulus cell differentiation","type":"exact"},{"name":"up-regulation of cumulus cell differentiation","type":"exact"},{"name":"upregulation of cumulus cell differentiation","type":"exact"}],"termid":"GO:0045594"}


id: PBO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 3","termid":"PBO:0051980"}


id: PBO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutY DNA glycosylase","termid":"PBO:0060210"}


id: PR:O13290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic dynein 1 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.06c","secondary_identifiers":["UniProtKB:O13290"],"synonyms":[{"name":"DYHC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DYNC1H1","type":"exact"},{"name":"dynein heavy chain, cytosolic (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13290"}


id: PBO:0052990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 2","termid":"PBO:0052990"}


id: PBO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1","termid":"PBO:0090632"}


id: FYPO:0005443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased proteolysis during vegetative growth","synonyms":[{"name":"decreased peptidolysis during vegetative growth","type":"exact"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased proteolysis during mitotic cell cycle","type":"related"},{"name":"reduced proteolysis during vegetative growth","type":"exact"}],"termid":"FYPO:0005443"}


id: GO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an irinotecan stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to irinotecan","termid":"GO:0061482"}


id: MONDO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises from the vagina and is characterized by the presence of a fibrovascular stalk lined by normal squamous epithelium. There is no evidence of atypia or relation to human papillomavirus.","definition_xrefs":["NCIT:C6374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"vaginal squamous tumor","termid":"MONDO:0001806"},{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal squamous papilloma","secondary_identifiers":["MEDGEN:234983","DOID:137","UMLS:C1336943"],"synonyms":[{"name":"squamous papilloma of the vagina","type":"exact"},{"name":"squamous papilloma of vagina","type":"exact"},{"name":"vagina squamous papilloma","type":"exact"},{"name":"vaginal squamous papilloma","type":"exact"}],"termid":"MONDO:0001779","xrefs":{"Monarch":{"xref_id":"0001779"}}}


id: PBO:0090593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-dependent phosphatase involved in cellular detoxification/metabolite repair (predicted)","termid":"PBO:0090593"}


id: GO:1900109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 dimethylation (obsolete GO:1900109)","synonyms":[{"name":"regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900109"}


id: MONDO:0968991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary central precocious puberty in male","termid":"MONDO:0958356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-genetic central precocious puberty in male","secondary_identifiers":["UMLS:C5816759","MEDGEN:1853153","Orphanet:650102"],"termid":"MONDO:0968991","xrefs":{"Monarch":{"xref_id":"0968991"}}}


id: PBO:0049646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 2","termid":"PBO:0049646"}


id: GO:0046842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trisporic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisporic acid metabolic process","termid":"GO:0046841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"trisporic acid biosynthetic process","synonyms":[{"name":"trisporic acid anabolism","type":"exact"},{"name":"trisporic acid biosynthesis","type":"exact"},{"name":"trisporic acid formation","type":"exact"},{"name":"trisporic acid synthesis","type":"exact"}],"termid":"GO:0046842"}


id: GO:0051510
data:
  {"annotated_genes":["SJAG_03581","SJAG_00244","SJAG_00514","SJAG_02169","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89328,95341,94066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[90191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[114649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell elongation","type":"narrow"}],"termid":"GO:0051510","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit epsilon","termid":"PBO:0046028"}


id: MONDO:0006283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by the presence of a syncytial growth pattern, large vesicular nuclei with esophnophilic nucleoi, and dense lymphoplasmacytic infiltration.","definition_xrefs":["NCIT:C45519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphoepithelioma-like lung carcinoma","secondary_identifiers":["MEDGEN:313374","EFO:1000340","UMLS:C1708792","ONCOTREE:LECLC"],"synonyms":[{"name":"lymphoepithelioma-like carcinoma of the lung","type":"related"}],"termid":"MONDO:0006283","xrefs":{"Monarch":{"xref_id":"0006283"}}}


id: GO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division. Follows B cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation","secondary_identifiers":["GO:0042114"],"synonyms":[{"name":"B lymphocyte proliferation","type":"exact"},{"name":"B-cell proliferation","type":"exact"},{"name":"B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042100"}


id: GO:1902240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:krc","PMID:16571598","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902220"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"}],"termid":"GO:1902240"}


id: GO:1902414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cell junction.","definition_xrefs":["PMID:18332111","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell junction","synonyms":[{"name":"protein localisation in cell junction","type":"exact"},{"name":"protein localisation to cell junction","type":"exact"},{"name":"protein localization in cell junction","type":"exact"}],"termid":"GO:1902414"}


id: PATO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000191 learning_and memory (obsolete PATO:0000191)","termid":"PATO:0000191"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","KEGG_REACTION:R00748","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: MONDO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute bacterial infection that affects the esophagus. Symptoms include severe pain on swallowing and retrosternal pain. Endoscopic examination reveals esophageal mucosal ulcerations and pseudomembranous formations.","definition_xrefs":["NCIT:C27106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bacterial esophagitis","secondary_identifiers":["UMLS:C0341108","DOID:13921","MEDGEN:83319","SCTID:235601001"],"synonyms":[{"name":"bacterial esophagitis","type":"exact"}],"termid":"MONDO:0001832","xrefs":{"Monarch":{"xref_id":"0001832"}}}


id: PBO:0079737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 2B","termid":"PBO:0079737"}


id: PBO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CET1","termid":"PBO:0015228"}


id: GO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (S,Z)-S-(2-aminovinyl)cysteine forming an intra-polypeptide cross-link between serine and cysteine.","definition_xrefs":["RESID:AA0204"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(2-aminovinyl)-D-cysteine (obsolete GO:0018096)","termid":"GO:0018096"}


id: MONDO:0016278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Carcinosarcoma of the cervix uteri is a rare, malignant, mixed epithelial and mesenchymal tumor, located in the cervix uteri, composed of an admixture of carcinomatous and sarcomatous elements. It usually presents with abnormal vaginal bleeding and a round, well-defined, gray to yellowish-white, pedunculated polypoid mass protruding through the cervical canal. Association with HPV infection (especially serotype 16) has been frequently reported.","definition_xrefs":["Orphanet:213787"],"gene_count":0,"genotype_count":0,"name":"obsolete carcinosarcoma of the cervix uteri (obsolete MONDO:0016278)","termid":"MONDO:0016278","xrefs":{"Monarch":{"xref_id":"0016278"}}}


id: PBO:0087358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor that reanneals snRNPs during spliceosome recycling; reanneals U4 and U6 snRNPs","termid":"PBO:0087358"}


id: PBO:0041425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf44-SGK3 readthrough","termid":"PBO:0041425"}


id: GO:1990451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in the homeostasis of organismal or cellular pH (with pH < 7). pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:BHF","GOC:go_curators","GOC:rl","PMID:10615049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to acidic pH","termid":"GO:0071468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acidic pH","synonyms":[{"name":"cellular stress response to acidity","type":"broad"}],"termid":"GO:1990451"}


id: PBO:0064960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 12","termid":"PBO:0064960"}


id: PBO:0091424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II alpha-mannosidase, subtype C, Ams1","termid":"PBO:0091424"}


id: MOD:02049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-isoleucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-isoleucine residue","synonyms":[{"name":"XlnkIle","type":"exact"}],"termid":"MOD:02049"}


id: FYPO:0007326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is decreased. In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial RNA 3'-end processing","termid":"FYPO:0004956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial tRNA 3'-end processing","synonyms":[{"name":"decreased mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transfer RNA 3'-end processing","type":"exact"},{"name":"reduced mitochondrial tRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0007326"}


id: MONDO:1011707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia, non-human animal","secondary_identifiers":["OMIA:002300"],"termid":"MONDO:1011707","xrefs":{"Monarch":{"xref_id":"1011707"}}}


id: PBO:0047271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member C","termid":"PBO:0047271"}


id: GO:0008356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.","definition_xrefs":["PMID:11672519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric cell division","secondary_identifiers":["Wikipedia:Asymmetric_cell_division"],"synonyms":[{"name":"asymmetric cytokinesis","type":"related"},{"name":"asymmetrical cell division","type":"exact"},{"name":"asymmetrical cytokinesis","type":"related"}],"termid":"GO:0008356"}


id: GO:1904231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GO_REF:0000059","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:18160053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of succinate dehydrogenase activity","termid":"GO:1904229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of succinate dehydrogenase activity","synonyms":[{"name":"activation of fumarate dehydrogenase activity","type":"narrow"},{"name":"activation of fumarate reductase activity","type":"narrow"},{"name":"activation of fumaric hydrogenase activity","type":"narrow"},{"name":"activation of succinate dehydrogenase activity","type":"narrow"},{"name":"activation of succinate oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:acceptor oxidoreductase activity","type":"narrow"},{"name":"activation of succinic acid dehydrogenase activity","type":"narrow"},{"name":"activation of succinodehydrogenase activity","type":"narrow"},{"name":"activation of succinyl dehydrogenase activity","type":"narrow"},{"name":"positive regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"positive regulation of fumarate reductase activity","type":"exact"},{"name":"positive regulation of fumaric hydrogenase activity","type":"exact"},{"name":"positive regulation of succinate oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of succinodehydrogenase activity","type":"exact"},{"name":"positive regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate reductase activity","type":"exact"},{"name":"up regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of succinodehydrogenase activity","type":"exact"},{"name":"up regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate reductase activity","type":"exact"},{"name":"up-regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up-regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinodehydrogenase activity","type":"exact"},{"name":"up-regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate reductase activity","type":"exact"},{"name":"upregulation of fumaric hydrogenase activity","type":"exact"},{"name":"upregulation of succinate dehydrogenase activity","type":"exact"},{"name":"upregulation of succinate oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"upregulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of succinodehydrogenase activity","type":"exact"},{"name":"upregulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904231"}


id: PBO:0067660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 837, pseudogene","termid":"PBO:0067660"}


id: PBO:0067169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 222, pseudogene","termid":"PBO:0067169"}


id: PATO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001123 relative power value (obsolete PATO:0001123)","termid":"PATO:0001123"}


id: GO:1990736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a vascular smooth muscle cell.","definition_xrefs":["PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1990736"}


id: GO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-norcoclaurine = S-adenosyl-L-homocysteine + (RS)-coclaurine.","definition_xrefs":["EC:2.1.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"(RS)-norcoclaurine 6-O-methyltransferase activity","secondary_identifiers":["RHEA:19941","MetaCyc:2.1.1.128-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(RS)-norcoclaurine 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030786"}


id: PR:Q9UTA7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C25B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.11","synonyms":[{"name":"Spom972h-SPAC25B8.11","type":"exact"}],"termid":"PR:Q9UTA7"}


id: PBO:0064047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 81","termid":"PBO:0064047"}


id: PBO:0090978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Iss10 ortholog","termid":"PBO:0090978"}


id: MONDO:0016051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip - retinopathy is an exceedingly rare association characterized by cleft lip and progressive retinopathy.","definition_xrefs":["Orphanet:1995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip-retinopathy syndrome","secondary_identifiers":["GARD:435","MESH:C538272","UMLS:C2931789","MEDGEN:419494"],"synonyms":[{"name":"Ausems Wittebol-Post Hennekam syndrome","type":"related"},{"name":"Ausems-Wittebol Post-Hennekam syndrome","type":"exact"},{"name":"cleft lip with progressive retinopathy","type":"related"},{"name":"cleft lip-cone rod dystrophy syndrome","type":"exact"},{"name":"cleft lip-progressive retinopathy syndrome","type":"exact"}],"termid":"MONDO:0016051","xrefs":{"Monarch":{"xref_id":"0016051"}}}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: GO:0075090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction mediated by G-protein alpha subunit (obsolete GO:0075090)","termid":"GO:0075090"}


id: MONDO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ochoa syndrome in which the cause of the disease is a mutation in the LRIG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ochoa syndrome","termid":"MONDO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"urofacial syndrome 2","secondary_identifiers":["MEDGEN:767434","UMLS:C3554520","OMIM:615112","GARD:15907"],"synonyms":[{"name":"LRIG2 Ochoa syndrome","type":"exact"},{"name":"Ochoa syndrome caused by mutation in LRIG2","type":"exact"},{"name":"UFS2","type":"related"},{"name":"urofacial syndrome 2","type":"exact"},{"name":"urofacial syndrome type 2","type":"exact"}],"termid":"MONDO:0014049","xrefs":{"Monarch":{"xref_id":"0014049"}}}


id: GO:0141164
data:
  {"annotated_genes":["SJAG_01179","SJAG_00354","SJAG_01816","SJAG_00984","SJAG_04154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92745,100621,101617,110574,118362],"is_not":false,"summary":null,"term":"GO:0141164"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null,"SJAG_04154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mitochondrial protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141164","terms_by_termid":{"GO:0141164":null}}


id: MOD:00692
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein crosslink modification that is not chemically categorized.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncategorized crosslinked residues","termid":"MOD:00692"}


id: PBO:0091275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartyl/glutamyl-tRNA amidotransferase subunit B-related Aim41","termid":"PBO:0091275"}


id: PBO:0111648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Ncb2","termid":"PBO:0111648"}


id: GO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of podosome assembly","termid":"GO:0071801"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of podosome assembly","synonyms":[{"name":"down regulation of podosome assembly","type":"exact"},{"name":"down-regulation of podosome assembly","type":"exact"},{"name":"downregulation of podosome assembly","type":"exact"},{"name":"inhibition of podosome assembly","type":"narrow"}],"termid":"GO:0071802"}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: MONDO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma arising from the surface of bone. It is characterized by a lobulated growth pattern, high mitotic activity, myxoid stroma formation, and necrotic changes. It occurs in adults. Clinical presentation includes pain, and sometimes swelling.","definition_xrefs":["NCIT:C7357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone chondrosarcoma","termid":"MONDO:0000515"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"periosteal chondrosarcoma","secondary_identifiers":["MONDO:0003683","ICDO:9221/3","MEDGEN:90806","DOID:5866","DOID:5859","UMLS:C0334549"],"synonyms":[{"name":"chondrosarcoma (disease) of periosteum","type":"exact"},{"name":"juxtacortical chondrosarcoma","type":"exact"},{"name":"juxtacortical chondrosarcoma (morphologic abnormality)","type":"exact"},{"name":"periosteal chondrosarcoma","type":"exact"},{"name":"periosteum chondrosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003680","xrefs":{"Monarch":{"xref_id":"0003680"}}}


id: MONDO:1010838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactosialidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosialidosis, non-human animal","termid":"MONDO:1010166"},{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis, dog","secondary_identifiers":["OMIA:000400-9615"],"termid":"MONDO:1010838","xrefs":{"Monarch":{"xref_id":"1010838"}}}


id: PBO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.15","termid":"PBO:0005187"}


id: PBO:0055644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3083","termid":"PBO:0055644"}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: PBO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK1","termid":"PBO:0046172"}


id: MONDO:0013336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"19p13.13 microdeletion syndrome is a rare partial autosomal monosomy characterized by global developmental delay, moderate intellectual disability, macrocephaly, overgrowth, hypotonia, and facial dysmorphism (frontal bossing, down-slanting palpebral fissures). Other associated features variably include ataxia, seizures, ventriculomegaly, ocular abnormalities (strabismus, optic nerve hypoplasia) and gastrointestinal problems (abdominal pain, vomiting, constipation).","definition_xrefs":["Orphanet:357001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 19","termid":"MONDO:0016897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19p13.13 deletion syndrome","secondary_identifiers":["DOID:0060426","GARD:17542","OMIM:613638","MEDGEN:462244","SCTID:764440006","UMLS:C3150894"],"synonyms":[{"name":"19p13.13 microdeletion syndrome","type":"related"},{"name":"Del(19)(p13.13)","type":"exact"},{"name":"chromosome 19P13.13 Duplication syndrome","type":"related"},{"name":"chromosome 19p13.13 deletion syndrome","type":"exact"},{"name":"monosomy 19p13.13","type":"exact"}],"termid":"MONDO:0013336","xrefs":{"Monarch":{"xref_id":"0013336"}}}


id: PBO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporter complex subunit Ctr5","termid":"PBO:0002151"}


id: FYPO:0003460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"decreased cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during oxidative stress response","type":"exact"},{"name":"decreased cellular trehalose level during vegetative growth and during cellular response to oxidative stress","type":"exact"},{"name":"decreased cellular trehalose level in response to oxidative stress","type":"exact"},{"name":"decreased trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"reduced cellular trehalose level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003460"}


id: PBO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.39","termid":"PBO:0000717"}


id: PBO:0049302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 2","termid":"PBO:0049302"}


id: MOD:00038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.","definition_xrefs":["PubMed:3734192","RESID:AA0029","ChEBI:16889","PubMed:2400108","PubMed:4343807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-proline","synonyms":[{"name":"(2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"3-hydroxy-L-proline","type":"exact"},{"name":"3-hydroxylated L-proline","type":"exact"},{"name":"3-trans-hydroxy-L-proline","type":"exact"},{"name":"3HyPro","type":"exact"},{"name":"L-threo-3-hydroxyproline","type":"exact"},{"name":"MOD_RES 3-hydroxyproline","type":"exact"},{"name":"beta-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00038"}


id: GO:0004052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12S,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["RHEA:10428","EC:1.13.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arachidonate 12(S)-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-9026006","Reactome:R-HSA-2161964","Reactome:R-HSA-9026007","Reactome:R-HSA-2161950","KEGG_REACTION:R01596","MetaCyc:ARACHIDONATE-12-LIPOXYGENASE-RXN","Reactome:R-HSA-2161948","Reactome:R-HSA-9024983","Reactome:R-HSA-9025957"],"synonyms":[{"name":"12-lipoxygenase activity","type":"related"},{"name":"12Delta-lipoxygenase activity","type":"related"},{"name":"12S-lipoxygenase activity","type":"related"},{"name":"C-12 lipoxygenase activity","type":"related"},{"name":"LTA4 synthase activity","type":"related"},{"name":"arachidonate:oxygen 12-oxidoreductase activity","type":"related"},{"name":"delta12-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"}],"termid":"GO:0004052"}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67271],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: GO:0034035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate metabolic process","termid":"GO:0034032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate metabolic process","synonyms":[{"name":"purine ribonucleoside bisphosphate metabolism","type":"exact"}],"termid":"GO:0034035"}


id: PBO:0083499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YMC1/YPR058W","termid":"PBO:0083499"}


id: MONDO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of catecholamine synthesis","secondary_identifiers":["GARD:21351","UMLS:C0342685","MEDGEN:575179","SCTID:237921002","ICD9:270.8","Orphanet:309830","icd11.foundation:1382276026"],"termid":"MONDO:0017759","xrefs":{"Monarch":{"xref_id":"0017759"}}}


id: PBO:0066154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP6 pseudogene 1","termid":"PBO:0066154"}


id: PBO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAZF1 antisense RNA 1","termid":"PBO:0052001"}


id: PBO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0030212"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: PBO:0085139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for rRNA synthesis and ribosomal assembly; required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit; essential gene","termid":"PBO:0085139"}


id: MONDO:0003849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the clivus. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base chordoma","termid":"MONDO:0002892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clivus chordoma","secondary_identifiers":["UMLS:C1333071","NCIT:C5412","SCTID:446939001","DOID:6312","ICD9:170.0","MEDGEN:232372"],"synonyms":[{"name":"chordoma (disease) of clivus of occipital bone","type":"exact"},{"name":"chordoma of clivus","type":"exact"},{"name":"chordoma of the clivus","type":"exact"},{"name":"clival chordoma","type":"exact"},{"name":"clivus of occipital bone chordoma (disease)","type":"exact"}],"termid":"MONDO:0003849","xrefs":{"Monarch":{"xref_id":"0003849"}}}


id: PR:Q09191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00420","PANTHER:PTHR10535:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.15","secondary_identifiers":["UniProtKB:Q09191"],"synonyms":[{"name":"RNA polymerases I, II, and III subunit ABC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC24B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2E","type":"exact"}],"termid":"PR:Q09191"}


id: GO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases its size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont in host (obsolete GO:0044128)","termid":"GO:0044128"}


id: FYPO:0007406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased lncRNA level","synonyms":[{"name":"decreased lncRNA accumulation","type":"related"},{"name":"decreased lncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased lncRNA level during vegetative growth","type":"exact"},{"name":"decreased lncRNA transcript level","type":"broad"},{"name":"decreased long non-coding RNA level","type":"exact"},{"name":"decreased mature lncRNA level","type":"exact"},{"name":"reduced lncRNA level","type":"exact"}],"termid":"FYPO:0007406"}


id: PBO:0086342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved tRNA modification, in mitochondrial and cytoplasmic tRNAs; also responsible for pseudouracil modification of some mRNAs; PUS4 overexpression leads to translational derepression of GCN4 (Gcd- phenotype)","termid":"PBO:0086342"}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:12829834","PMID:20631144","PMID:11124948","PMID:9566918"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: MONDO:0968955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocalcified amelogenesis imperfecta","secondary_identifiers":["Orphanet:100032","icd11.foundation:1793262466","MEDGEN:140773","GARD:16931","UMLS:C0399376"],"synonyms":[{"name":"amelogenesis imperfecta type 3","type":"exact"}],"termid":"MONDO:0968955","xrefs":{"Monarch":{"xref_id":"0968955"}}}


id: PBO:0116851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin remodelling factor Iws1","termid":"PBO:0116851"}


id: PBO:0041531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf95 divergent transcript","termid":"PBO:0041531"}


id: PBO:0004402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-diacylglycerol acyltransferase Plh1","termid":"PBO:0004402"}


id: PBO:0047514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetuin B","termid":"PBO:0047514"}


id: GO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The portion of the plasma membrane surrounding an invadopodium.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium membrane (obsolete GO:0071438)","termid":"GO:0071438"}


id: PR:Q10301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C22H10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.08","synonyms":[{"name":"Spom972h-SPAC22H10.08","type":"exact"}],"termid":"PR:Q10301"}


id: MONDO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure caused by abnormal myocardial relaxation during diastole leading to defective cardiac filling.","definition_xrefs":["MESH:D054144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"diastolic heart failure","secondary_identifiers":["ICD9:428.30","SCTID:418304008","ICD9:428.3","MedDRA:10069211","MEDGEN:210051","DOID:9775","EFO:1000899","UMLS:C1135196"],"termid":"MONDO:0006727","xrefs":{"Monarch":{"xref_id":"0006727"}}}


id: GO:0044395
data:
  {"annotated_genes":["SJAG_01367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90470],"is_not":false,"summary":null,"term":"GO:0044395"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuolar membrane; usually uses signals contained within the protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to membrane","termid":"GO:0006612"},{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"protein localization to vacuolar membrane","termid":"GO:1903778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting to vacuolar membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044395","terms_by_termid":{"GO:0044395":null}}


id: GO:1902220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:rl","PMID:14569084","GOC:TermGenie","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"narrow"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"}],"termid":"GO:1902220"}


id: FYPO:0006356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, is abnormal.","definition_xrefs":["PomBase:mah","GO:0006338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin remodeling","synonyms":[{"name":"abnormal chromatin modeling","type":"exact"},{"name":"abnormal chromatin remodelling","type":"exact"}],"termid":"FYPO:0006356"}


id: PBO:0041145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 4","termid":"PBO:0041145"}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: PBO:0076884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 36","termid":"PBO:0076884"}


id: PBO:0074293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolemma associated protein","termid":"PBO:0074293"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: GO:0010429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/unspecified trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"methyl-CpNpN binding","termid":"GO:0010429"}


id: PBO:0059321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 6","termid":"PBO:0059321"}


id: PBO:0040355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 4","termid":"PBO:0040355"}


id: MONDO:0022874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis hypopituitarism","termid":"MONDO:0022874","xrefs":{"Monarch":{"xref_id":"0022874"}}}


id: FYPO:0004615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during interphase of the mitotic cell cycle in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a cytoplasmic microtubule, occurs at a higher rate, or speed, than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of mitotic interphase microtubule polymerization","synonyms":[{"name":"increased interphase microtubule plus end growth rate","type":"exact"},{"name":"increased interphase microtubule polymerization rate","type":"exact"},{"name":"increased rate of cytoplasmic microtubule polymerization during mitotic interphase","type":"exact"},{"name":"increased rate of interphase cytoplasmic microtubule polymerization","type":"exact"},{"name":"increased rate of interphase microtubule growth","type":"exact"},{"name":"increased rate of interphase microtubule polymerisation","type":"exact"},{"name":"increased rate of interphase microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of interphase microtubule polymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0004615"}


id: PBO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 3","termid":"PBO:0005009"}


id: GO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyleneglutarate = 2-methylene-3-methylsuccinate.","definition_xrefs":["RHEA:13793","EC:5.4.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"2-methyleneglutarate mutase activity","secondary_identifiers":["MetaCyc:2-METHYLENEGLUTARATE-MUTASE-RXN","KEGG_REACTION:R03908"],"synonyms":[{"name":"2-methyleneglutarate carboxy-methylenemethylmutase activity","type":"related"},{"name":"alpha-methyleneglutarate mutase activity","type":"related"}],"termid":"GO:0047548"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: PATO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001077 absolute pressure (obsolete PATO:0001077)","termid":"PATO:0001077"}


id: GO:0005955
data:
  {"annotated_genes":["SJAG_03793","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74815,81344],"is_not":false,"summary":null,"term":"GO:0005955"}]},"cv_name":"cellular_component","definition":"A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.","definition_xrefs":["PMID:26794871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03631":null,"SJAG_03793":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcineurin complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase complex","type":"narrow"},{"name":"protein phosphatase type 2B complex","type":"exact"}],"termid":"GO:0005955","terms_by_termid":{"GO:0005955":null}}


id: GO:0022400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsin-mediated signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of opsin-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-2514859"],"synonyms":[{"name":"regulation of rhodopsin mediated signaling pathway","type":"exact"},{"name":"regulation of rhodopsin mediated signalling","type":"exact"},{"name":"regulation of rhodopsin-mediated signaling pathway","type":"narrow"}],"termid":"GO:0022400"}


id: PBO:0057660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1252","termid":"PBO:0057660"}


id: PBO:0045926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 2","termid":"PBO:0045926"}


id: MONDO:0021095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders which feature impaired motor control characterized by bradykinesia, MUSCLE RIGIDITY; TREMOR; and postural instability. Parkinsonian diseases are generally divided into primary parkinsonism (see PARKINSON DISEASE), secondary parkinsonism (see PARKINSON DISEASE, SECONDARY) and inherited forms. These conditions are associated with dysfunction of dopaminergic or closely related motor integration neuronal pathways in the BASAL GANGLIA.","definition_xrefs":["MESH:D020734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal ganglia disorder","termid":"MONDO:0003996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinsonian disorder","secondary_identifiers":["MEDGEN:66079","UMLS:C0242422","DOID:0080855"],"termid":"MONDO:0021095","xrefs":{"Monarch":{"xref_id":"0021095"}}}


id: GO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-cysteine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}


id: PBO:0089943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg2","termid":"PBO:0089943"}


id: PBO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase (predicted)","termid":"PBO:0001802"}


id: SO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that mediates protein-protein interaction and defines adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:19818632","PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"DDB_box","synonyms":[{"name":"DDB box","type":"exact"},{"name":"DDB-box","type":"exact"}],"termid":"SO:0001804"}


id: PBO:0053997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1320","termid":"PBO:0053997"}


id: GO:1905919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of CoA-transferase activity.","definition_xrefs":["GO_REF:0000059","GOC:aruk","GOC:TermGenie","PMID:20164328","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CoA-transferase activity (obsolete GO:1905919)","synonyms":[{"name":"down regulation of CoA-transferase activity","type":"exact"},{"name":"down-regulation of CoA-transferase activity","type":"exact"},{"name":"downregulation of CoA-transferase activity","type":"exact"},{"name":"inhibition of CoA-transferase activity","type":"narrow"}],"termid":"GO:1905919"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: FYPO:0005416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis II","termid":"FYPO:0005414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during meiotic anaphase II","synonyms":[{"name":"increased protein accumulation during meiotic anaphase II","type":"related"},{"name":"increased protein level during second meiotic anaphase","type":"exact"}],"termid":"FYPO:0005416"}


id: PBO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6-21 (non-functional)","termid":"PBO:0051379"}


id: GO:1990540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a manganese ion is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:12890866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial manganese ion transmembrane transport","termid":"GO:1990540"}


id: GO:0061763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organelle membrane fusion process in which the membrane of a multivesicular body fuses with a lysosome to create a hybrid organelle.","definition_xrefs":["GOC:PARL","PMID:21118109","GOC:dph","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"},{"relation_name":"part_of","term_name":"endosome to lysosome transport via multivesicular body sorting pathway","termid":"GO:0032510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"multivesicular body-lysosome fusion","synonyms":[{"name":"MVB-lysosome fusion","type":"exact"},{"name":"endosome-lysosome fusion","type":"related"},{"name":"fusion of MVB to lysosome","type":"exact"},{"name":"fusion of multivesicular body to lysosome","type":"exact"},{"name":"late endosome-lysosome fusion","type":"related"}],"termid":"GO:0061763"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine (obsolete GO:0046924)","termid":"GO:0046924"}


id: GO:0035187
data:
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id: GO:0006357
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id: MONDO:0019080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia totalis is a form of alopecia areata, an inflammatory disease of the hair follicle, characterized by a complete loss of hair of the entire scalp which becomes glabrous.","definition_xrefs":["Orphanet:700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia totalis","secondary_identifiers":["icd11.foundation:1633035058","GARD:613","MedDRA:10001766","SCTID:19754005","UMLS:C0263504","MEDGEN:75525","ICD9:704.09"],"synonyms":[{"name":"alopecia totalis","type":"exact"},{"name":"total alopecia areata","type":"related"}],"termid":"MONDO:0019080","xrefs":{"Monarch":{"xref_id":"0019080"}}}


id: MONDO:0002183
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder involving the attachment of a tendon or ligament to a bone","definition_xrefs":["Wikipedia:Enthesopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enthesopathy","secondary_identifiers":["EFO:0009666","ICD9:726.9","MESH:D012216","SCTID:23680005","UMLS:C0242490","ICD9:726.90","MEDGEN:66909","DOID:204","MESH:D000070676"],"synonyms":[{"name":"disease of enthesis","type":"exact"},{"name":"disease or disorder of enthesis","type":"exact"},{"name":"disorder of enthesis","type":"exact"},{"name":"enthesis disease","type":"exact"},{"name":"enthesis disease or disorder","type":"exact"}],"termid":"MONDO:0002183","xrefs":{"Monarch":{"xref_id":"0002183"}}}


id: PBO:0075749
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 2","termid":"PBO:0075749"}


id: MONDO:0975805
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveal hypoplasia 3","secondary_identifiers":["OMIM:620958"],"termid":"MONDO:0975805","xrefs":{"Monarch":{"xref_id":"0975805"}}}


id: PBO:0109432
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: MONDO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylometaphyseal dysplasia, Golden type is a rare primary bone dysplasia disorder characterized by severe short stature, coarse facies, thoracolumbar kyphoscoliosis and enlarged joints with contractures. Psychomotor delay and intellectual disability may also be associated. Radiographic features include flat vertebral bodies, lacy ossification of the metaphyses of long bones and iliac crests, and marked sclerosis of the skull base.","definition_xrefs":["Orphanet:168544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Golden type","secondary_identifiers":["GARD:8343","icd11.foundation:840695879","UMLS:C0796172","MESH:C563124","OMIM:313420","MEDGEN:208672"],"synonyms":[{"name":"X-linked spondylometaphyseal dysplasia","type":"exact"},{"name":"spondylometaphyseal dysplasia Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia X-linked","type":"related"},{"name":"spondylometaphyseal dysplasia, Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia, X-linked","type":"related"}],"termid":"MONDO:0010738","xrefs":{"Monarch":{"xref_id":"0010738"}}}


id: GO:0046557
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id: PBO:0004430
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id: PBO:0001398
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id: GO:0061709
data:
  {"annotated_genes":["SJAG_00059","SJAG_04435","SJAG_04991","SJAG_05289","SJAG_03170","SJAG_01382","SJAG_04219","SJAG_00004","SJAG_04655","SJAG_03100","SJAG_00053","SJAG_02539","SJAG_01135","SJAG_04502","SJAG_03851","SJAG_02852","SJAG_04232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59711,74458,74864,74878,76362,78676,80094,81397,81478,81503,81883,89877,98909,108127,110237,116201],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[88986],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.","definition_xrefs":["PMID:24060720","PMID:26040717","GOC:autophagy","PMID:22481944","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_02539":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"reticulophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1990766"],"synonyms":[{"name":"ER autophagy","type":"exact"},{"name":"ER degradation","type":"related"},{"name":"ER-phagy","type":"exact"},{"name":"autophagy of the ER","type":"exact"},{"name":"autophagy of the endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum autophagy","type":"exact"},{"name":"endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0061709","terms_by_termid":{"GO:0061709":null,"GO:0140501":null}}


id: GO:0038083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own tyrosine amino acid residues, or a tyrosine residue on an identical protein.","definition_xrefs":["PMID:10037737","PMID:10940390","PMID:10068444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"RTK autophosphorylation","type":"narrow"},{"name":"receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"tyrosine autophosphorylation","type":"exact"}],"termid":"GO:0038083"}


id: PBO:0051182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-73","termid":"PBO:0051182"}


id: PBO:0011078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Req family helicase","termid":"PBO:0011078"}


id: MONDO:0018285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked congenital disorder of glycosylation with intellectual disability as a major feature (obsolete MONDO:0018285)","secondary_identifiers":["Orphanet:371054"],"synonyms":[{"name":"X-linked CDG with intellectual disability as a major feature","type":"exact"}],"termid":"MONDO:0018285","xrefs":{"Monarch":{"xref_id":"0018285"}}}


id: MONDO:0100101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the MUSK gene.","definition_xrefs":["OMIM:208150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 1","secondary_identifiers":["MEDGEN:220903","DOID:0111377","Orphanet:994","UMLS:C1276035"],"synonyms":[{"name":"FADS1","type":"exact"},{"name":"Pena-Shokeir syndrome type 1","type":"exact"},{"name":"Pena-Shokeir syndrome, type 1","type":"exact"}],"termid":"MONDO:0100101","xrefs":{"Monarch":{"xref_id":"0100101"}}}


id: PBO:0062738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 5","termid":"PBO:0062738"}


id: PBO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transporter","termid":"PBO:0000951"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: MONDO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ileocolitis or ileal Crohn's is the most common type of Crohn's disease. It affects both the ileum (small intestine) and the colon.","definition_xrefs":["EFO:0005624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn ileitis","termid":"MONDO:0000709"},{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"ileocolitis","secondary_identifiers":["NANDO:1200447","MEDGEN:184943","MedDRA:10062647","DOID:0060190","UMLS:C0949272"],"termid":"MONDO:0005534","xrefs":{"Monarch":{"xref_id":"0005534"}}}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0049080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 135","termid":"PBO:0049080"}


id: PBO:0062803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 2","termid":"PBO:0062803"}


id: GO:1905120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a haloperidol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24751813","GO_REF:0000071","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to haloperidol","termid":"GO:1905119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to haloperidol","termid":"GO:1905120"}


id: PBO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL10RB divergent transcript","termid":"PBO:0051558"}


id: PBO:0045363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 3","termid":"PBO:0045363"}


id: MONDO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited condition characterized by the development of kidney oncocytomas which are often bilateral and multifocal. This condition may be connected to Birt-Hogg-Dube syndrome.","definition_xrefs":["NCIT:C8960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney oncocytoma","termid":"MONDO:0003825"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary kidney oncocytoma","secondary_identifiers":["MEDGEN:209307","DOID:6244","UMLS:C0879606"],"synonyms":[{"name":"familial renal oncocytoma","type":"exact"},{"name":"hereditary kidney oncocytoma","type":"exact"},{"name":"hereditary renal oncocytoma","type":"exact"}],"termid":"MONDO:0003824","xrefs":{"Monarch":{"xref_id":"0003824"}}}


id: MONDO:0010823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any rhizomelic chondrodysplasia punctata in which the cause of the disease is a mutation in the AGPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"alkylglycerone-phosphate synthase deficiency","termid":"MONDO:0100274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0019053","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 3","secondary_identifiers":["DOID:0110853","MESH:C537608","Orphanet:309803","GARD:9682","icd11.foundation:110878063","MEDGEN:374012","NANDO:1200772","OMIM:600121","UMLS:C1838612"],"synonyms":[{"name":"AGPS deficiency","type":"broad"},{"name":"AGPS rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"RCDP3","type":"exact"},{"name":"alkyldihydroxyacetonephosphate synthase deficiency","type":"broad"},{"name":"alkylglycerone-phosphate synthase deficiency","type":"broad"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in AGPS","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 3","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 3","type":"related"}],"termid":"MONDO:0010823","xrefs":{"Monarch":{"xref_id":"0010823"}}}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: PR:O60158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt4 gene.","definition_xrefs":["UniProtKB:O60158","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.10","synonyms":[{"name":"Spom972h-bqt4","type":"exact"}],"termid":"PR:O60158"}


id: PBO:0073853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 3","termid":"PBO:0073853"}


id: GO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a reaction that results in the formation of carbamoyl phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl-phosphate synthase activity (obsolete GO:0004086)","synonyms":[{"name":"carbamoyl phosphate synthase activity","type":"exact"},{"name":"carbamoyl-phosphate synthase activity","type":"exact"}],"termid":"GO:0004086"}


id: GO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"negative regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0072513"}


id: GO:1902308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","PMID:11953308"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of peptidyl-serine dephosphorylation (obsolete GO:1902308)","termid":"GO:1902308"}


id: SO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is localized inside the cytoplasm.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extramembrane_polypeptide_region","termid":"SO:0001072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cytoplasmic_polypeptide_region","secondary_identifiers":["BS:00145"],"synonyms":[{"name":"cytoplasm_location","type":"exact"},{"name":"cytoplasmic polypeptide region","type":"exact"},{"name":"inside","type":"related"}],"termid":"SO:0001073"}


id: PBO:0028016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Rab_geranylgeranyltransferase_activity","termid":"PBO:0028016"}


id: GO:0110120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at the nuclear side of the mitotic spindle pole body.","definition_xrefs":["GOC:vw","PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization to mitotic spindle pole body","termid":"GO:1990735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization to nuclear side of mitotic spindle pole body","termid":"GO:0110120"}


id: PBO:0067317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 403, pseudogene","termid":"PBO:0067317"}


id: GO:0099526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the presynapse to the nucleus via cytoskeletal transport of a protein from a presynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:24317321","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic signal transduction","termid":"GO:0098928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynapse to nucleus signaling pathway","synonyms":[{"name":"presynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099526"}


id: MONDO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a liver.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"liver carcinoma in situ","secondary_identifiers":["ICD10CM:D01.5","MEDGEN:577201","SCTID:92644006","UMLS:C0345908","DOID:9132","ICD9:230.8"],"synonyms":[{"name":"carcinoma in situ of liver","type":"exact"},{"name":"carcinoma in situ of liver and biliary system","type":"exact"},{"name":"carcinoma in situ of liver, gallbladder and bile ducts","type":"exact"},{"name":"liver in situ carcinoma","type":"exact"},{"name":"stage 0 liver carcinoma","type":"exact"}],"termid":"MONDO:0004715","xrefs":{"Monarch":{"xref_id":"0004715"}}}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: GO:0043377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of CD8-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043376"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001186"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"down regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"down-regulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"downregulation of CD8-positive, alpha-beta T cell differentiation","type":"exact"},{"name":"inhibition of CD8-positive, alpha-beta T cell differentiation","type":"narrow"},{"name":"negative regulation of CD8-positive T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha beta T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of CD8-positive, alpha-beta T cell development","type":"related"}],"termid":"GO:0043377"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: PBO:0038981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 1A","termid":"PBO:0038981"}


id: GO:0030389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine metabolic process","synonyms":[{"name":"fructosamine metabolism","type":"exact"}],"termid":"GO:0030389"}


id: PBO:0027510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_following_spore_germination,_single_cell_division,_unequal_chromosome_segregation","termid":"PBO:0027510"}


id: MONDO:0006518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic Creutzfeldt-Jakob disease (sCJD) is the most common type of CJD, accounting for around 85% of cases. The precise cause of sporadic CJD is unclear, but it's been suggested that a normal brain protein changes abnormally ('misfolds') and turns into a prion. Most cases of sporadic CJD occur in adults aged between 45 and 75. On average, symptoms develop at age 60-65 years.","definition_xrefs":["EFO:1000656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Creutzfeldt Jacob disease","termid":"MONDO:0005357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic Creutzfeld Jacob disease","termid":"MONDO:0006518","xrefs":{"Monarch":{"xref_id":"0006518"}}}


id: PBO:0073865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 1","termid":"PBO:0073865"}


id: GO:0071571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an LRR (leucine-rich repeat) domain interaction.","definition_xrefs":["InterPro:IPR001611","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete LRR domain-mediated complex assembly (obsolete GO:0071571)","synonyms":[{"name":"leucine-rich repeat domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071571"}


id: GO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + L-pipecolate = NADPH + delta1-piperideine-2-carboxylate.","definition_xrefs":["EC:1.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-2-carboxylate reductase activity","secondary_identifiers":["MetaCyc:RXN-8166","RHEA:12524"],"synonyms":[{"name":"1,2-didehydropipecolate reductase activity","type":"related"},{"name":"1,2-didehydropipecolic reductase activity","type":"related"},{"name":"D1-piperideine-2-carboxylate reductase activity","type":"exact"},{"name":"L-pipecolate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"P2C reductase activity","type":"related"},{"name":"delta 1-piperideine-2-carboxylate reductase activity","type":"exact"}],"termid":"GO:0047125"}


id: PBO:0036421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 3 (predicted)","termid":"PBO:0036421"}


id: MONDO:0700055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KIF1A-associated neurological disorder (KAND) encompasses a group of rare neurodegenerative conditions caused by variants in KIF1A","definition_xrefs":["PMID:3388045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1A related neurological disorder","secondary_identifiers":["PMID:37259299"],"synonyms":[{"name":"KAND","type":"exact"},{"name":"KIF1A neurological disorder","type":"exact"},{"name":"neurological disorder caused by mutation in KIF1A","type":"exact"},{"name":"neurological disorder caused by variation in KIF1A","type":"exact"}],"termid":"MONDO:0700055","xrefs":{"Monarch":{"xref_id":"0700055"}}}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete D-galactose 6-phosphate 1-epimerase activity (obsolete GO:0102541)","termid":"GO:0102541"}


id: GO:0060329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the rear of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in rearward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in rearward cell locomotion","type":"related"}],"termid":"GO:0060329"}


id: GO:2000932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"positively_regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellobiose metabolic process","synonyms":[{"name":"positive regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000932"}


id: GO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platelet-derived growth factor","termid":"GO:0036119"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platelet-derived growth factor stimulus","synonyms":[{"name":"cellular response to PDGF stimulus","type":"exact"}],"termid":"GO:0036120"}


id: PBO:0071824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 19","termid":"PBO:0071824"}


id: PBO:0053212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9B","termid":"PBO:0053212"}


id: PBO:0066729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 26","termid":"PBO:0066729"}


id: PBO:0028106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_galactosylation","termid":"PBO:0028106"}


id: MONDO:0014261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the SFXN4 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"growth and developmental delay-hypotonia-vision impairment-lactic acidosis syndrome","secondary_identifiers":["MEDGEN:816331","GARD:17615","OMIM:615578","DOID:0111484","Orphanet:391348","UMLS:C3810001"],"synonyms":[{"name":"COXPD18","type":"related"},{"name":"SFXN4 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 18","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in SFXN4","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 18","type":"exact"}],"termid":"MONDO:0014261","xrefs":{"Monarch":{"xref_id":"0014261"}}}


id: PBO:0054200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1580","termid":"PBO:0054200"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: GO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the root hair grows longer.","definition_xrefs":["PMID:12468740","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"root hair cell development","termid":"GO:0080147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair elongation","termid":"GO:0048767"}


id: MOD:01606
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl 2-aminoadipic 6-phosphoric anhydride.","definition_xrefs":["PubMed:19620981","RESID:AA0503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)-6-oxo-6-(phosphonooxy)hexanoic acid","type":"exact"},{"name":"5-glutamyl 2-aminoadipic 6-phosphoric anhydride","type":"exact"}],"termid":"MOD:01606"}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: GO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of trichome initiation; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398).","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of trichome initiation (sensu Magnoliophyta) (obsolete GO:0048517)","synonyms":[{"name":"positive regulation of trichome initiation (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0048517"}


id: MONDO:0012852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 10q23-q24.","definition_xrefs":["DOID:0110898","PMID:10053016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 20","secondary_identifiers":["MEDGEN:394126","UMLS:C2676781","MESH:C567361","OMIM:612288"],"synonyms":[{"name":"IBD20","type":"exact"},{"name":"inflammatory bowel disease 20","type":"exact"},{"name":"inflammatory bowel disease type 20","type":"exact"}],"termid":"MONDO:0012852","xrefs":{"Monarch":{"xref_id":"0012852"}}}


id: PBO:0054918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2332","termid":"PBO:0054918"}


id: PBO:0077643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor necrosis factor","termid":"PBO:0077643"}


id: PBO:0005495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease Apn1","termid":"PBO:0005495"}


id: FYPO:0007501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, arrangement of constituent parts, or disassembly of the horsetail-astral microtubule array is abnormal.","definition_xrefs":["PomBase:mah","GO:0032118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal horsetail-astral microtubule organization","synonyms":[{"name":"abnormal horsetail-astral microtubule array organization","type":"exact"},{"name":"abnormal horsetail-astral microtubule organisation","type":"exact"},{"name":"abnormal horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"FYPO:0007501"}


id: MONDO:0016988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperinsulinism due to HNF4A deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by macrosomia, transient or persistent hyperinsulinemic hypoglycemia (HH), responsiveness to diazoxide and a propensity to develop maturity-onset diabetes of the young subtype 1 (MODY-1).","definition_xrefs":["Orphanet:263455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinism due to HNF4A deficiency","secondary_identifiers":["MEDGEN:894506","GARD:20903","SCTID:717048002","UMLS:C4274078"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to HNF4A deficiency","type":"exact"}],"termid":"MONDO:0016988","xrefs":{"Monarch":{"xref_id":"0016988"}}}


id: GO:0032769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of monooxygenase activity (obsolete GO:0032769)","synonyms":[{"name":"down regulation of monooxygenase activity","type":"exact"},{"name":"down-regulation of monooxygenase activity","type":"exact"},{"name":"downregulation of monooxygenase activity","type":"exact"},{"name":"inhibition of monooxygenase activity","type":"narrow"}],"termid":"GO:0032769"}


id: PBO:0005679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF1/Su(H)/LAG-1 family transcription factor Cbf12","termid":"PBO:0005679"}


id: PBO:0046919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member C, pseudogene","termid":"PBO:0046919"}


id: PBO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHDC7B divergent transcript","termid":"PBO:0052481"}


id: GO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell migration","termid":"GO:0043536"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"positively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090050"}


id: MONDO:0019984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of renal tubular dysgenesis that develops in donor fetuses due to the uneven shunting of growth factor and nutrients to the kidney of the recipient and is characterized by absent or poorly developed proximal tubules, persistent oligohydramnios and consequently the Potter sequence (facial dysmorphism with large and flat low-set ears, lung hypoplasia, arthrogryposis and limb positioning defects).","definition_xrefs":["Orphanet:97367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular dysgenesis","termid":"MONDO:0017609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular dysgenesis due to twin-twin transfusion","secondary_identifiers":["GARD:19377","icd11.foundation:122234138","MEDGEN:1766862","UMLS:C5438872"],"termid":"MONDO:0019984","xrefs":{"Monarch":{"xref_id":"0019984"}}}


id: SO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 4 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4_methylcytosine","secondary_identifiers":["http://www.insdc.org/files/feature_table.html#7.4.2","http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"4-mC","type":"exact"},{"name":"4-methylcytosine","type":"exact"},{"name":"N4 methylcytosine","type":"exact"},{"name":"N4-methylcytosine","type":"exact"},{"name":"N4_methylcytosine","type":"exact"},{"name":"m-4C","type":"exact"},{"name":"m4c","type":"exact"}],"termid":"SO:0001919"}


id: PBO:0058559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6501","termid":"PBO:0058559"}


id: MONDO:0015746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Male infertility due to globozoospermia is a male infertility due to sperm disorder characterized by the presence, in sperm, of a large majority of round-headed spermatozoa that lack the acrosome and have an aberrant nuclear membrane and midpiece defects. The acrosomeless spermatozoa is not able to penetrate the zona pellucida and thus fertilization failures, even with intracytoplasmic spem injection, are frequent.","definition_xrefs":["Orphanet:171709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility with teratozoospermia due to single gene mutation","termid":"MONDO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility due to globozoospermia","secondary_identifiers":["MEDGEN:1826006","GARD:12502","UMLS:C5679591","DOID:0112312"],"synonyms":[{"name":"Male infertility due to round-headed spermatozoa","type":"exact"},{"name":"globozoospermia","type":"related"},{"name":"male infertility due to globozoospermia","type":"exact"},{"name":"male infertility due to round-headed spermatozoa","type":"exact"},{"name":"round-headed sperm syndrome","type":"exact"}],"termid":"MONDO:0015746","xrefs":{"Monarch":{"xref_id":"0015746"}}}


id: GO:0140226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transient cleavage and passage of individual RNA strands or double helices through one another, resulting a topological transformation in RNA.","definition_xrefs":["GOC:lnp","PMID:23912945","PMID:27257063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"RNA topoisomerase activity","termid":"GO:0140226"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: GO:0023062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via transcytosis. Transcytosis is the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["GOC:mtg_signal","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via transcytosis (obsolete GO:0023062)","synonyms":[{"name":"signal transmission via transcytosis","type":"exact"}],"termid":"GO:0023062"}


id: PBO:0062693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 4","termid":"PBO:0062693"}


id: PBO:0053731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 945","termid":"PBO:0053731"}


id: PATO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acceleration","termid":"PATO:0001028"}


id: GO:0035433
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transport","termid":"GO:0006846"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"acetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetate membrane transport","type":"exact"}],"termid":"GO:0035433","terms_by_termid":{"GO:0006847":null}}


id: GO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen via pinocytosis.","definition_xrefs":["GOC:add","PMID:7543530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation following pinocytosis","synonyms":[{"name":"B lymphocyte antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-cell antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation following pinocytosis","type":"exact"}],"termid":"GO:0002421"}


id: GO:0106362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = H+ + N(omega)-(N-acetyl-beta-D-glucosaminyl)-L-arginyl-[protein] + UDP.","definition_xrefs":["RHEA:66632","GOC:sp","PMID:30619781","PMID:23955153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetylglucosaminyltransferase activity","termid":"GO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"protein-arginine N-acetylglucosaminyltransferase activity","termid":"GO:0106362"}


id: PBO:0054625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2030","termid":"PBO:0054625"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:20160119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: PBO:0082113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase); cytosolic enzyme that transfers an acetyl group from one acetyl-CoA molecule to another, forming acetoacetyl-CoA; involved in the first step in mevalonate biosynthesis; human ACAT1 functionally complements the growth defect caused by repression of ERG10 expression","termid":"PBO:0082113"}


id: GO:0140799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + H+(in) = glycine(in) + H+(out).","definition_xrefs":["PMID:16701208","PMID:26912364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"glycine transmembrane transporter activity","termid":"GO:0015187"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycine:proton antiporter activity","termid":"GO:0140799"}


id: GO:0097637
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of autophagosome membrane (obsolete GO:0097637)","synonyms":[{"name":"autophagic vacuole integral membrane protein","type":"related"},{"name":"integral component of autophagic vacuole membrane","type":"exact"},{"name":"integral to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097637"}


id: FYPO:0001703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is normal (i.e. indistinguishable from wild type). A cell cycle checkpoint controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events.","definition_xrefs":["PomBase:mah","GO:0000075","GO:0007093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle checkpoint","synonyms":[{"name":"normal cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001703"}


id: FYPO:0002451
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002451","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to childhood associated with a systemic vasculitis (obsolete MONDO:0017022)","secondary_identifiers":["Orphanet:264709"],"synonyms":[{"name":"secondary ILD specific to childhood associated with a systemic vasculitis","type":"exact"}],"termid":"MONDO:0017022","xrefs":{"Monarch":{"xref_id":"0017022"}}}


id: GO:0086060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086060"}


id: MONDO:1012153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, dog","secondary_identifiers":["OMIA:000631-9615"],"termid":"MONDO:1012153","xrefs":{"Monarch":{"xref_id":"1012153"}}}


id: PBO:0117065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMA1 antisense RNA 1","termid":"PBO:0117065"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: FYPO:0001792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication does not occur, leaving the cell with a single spindle pole body later in the cell cycle than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic spindle pole body duplication","synonyms":[{"name":"abolished mitotic SPB duplication","type":"exact"},{"name":"abolished mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abolished spindle pole body duplication during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body duplication abolished","type":"exact"},{"name":"single mitotic spindle pole body","type":"related"}],"termid":"FYPO:0001792"}


