# terms

id: PBO:0063216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 1","termid":"PBO:0063216"}


id: GO:0010852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0004857","GO:0098772","GO:0030234","GO:0140678"],"is_obsolete":false,"name":"cyclase inhibitor activity","termid":"GO:0010852"}


id: MONDO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related neuropathological condition with severe neuronal cell loss and gliosis in the hippocampus","definition_xrefs":["EFO:0005678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocampal sclerosis of aging","secondary_identifiers":["MEDGEN:1801569","UMLS:C5691287"],"termid":"MONDO:0005544","xrefs":{"Monarch":{"xref_id":"0005544"}}}


id: PBO:0058220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4510","termid":"PBO:0058220"}


id: PBO:0057766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2110","termid":"PBO:0057766"}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_03312","SJAG_03743","SJAG_04842","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78441],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[72931,73254,75641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0009074":null}}


id: GO:0140502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of host salicylic acid-mediated innate immune signaling.","definition_xrefs":["PMID:30651637","PMID:25438793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of defense-related host salicylic acid-mediated signal transduction pathway","termid":"GO:0052003"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signaling","synonyms":[{"name":"effector-mediated disruption of host salicylic acid-mediated innate immune signalling","type":"exact"},{"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signalling","type":"exact"}],"termid":"GO:0140502"}


id: PBO:0065548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 2","termid":"PBO:0065548"}


id: PR:P0CT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.11","synonyms":[{"name":"Spom972h-rpl2302","type":"exact"}],"termid":"PR:P0CT61"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: MONDO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A dilated cardiomyopathy that has material basis in mutations in the DMD gene.","definition_xrefs":["DOID:0060561"],"gene_count":0,"genotype_count":0,"name":"obsolete DMD-related dilated cardiomyopathy (obsolete MONDO:0000810)","termid":"MONDO:0000810","xrefs":{"Monarch":{"xref_id":"0000810"}}}


id: GO:1902549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Mei2 nuclear dot.","definition_xrefs":["PMID:23980030","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Mei2 nuclear dot","synonyms":[{"name":"protein localisation in Mei2 nuclear dot","type":"exact"},{"name":"protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"protein localization in Mei2 nuclear dot","type":"exact"},{"name":"protein localization to Mei2 dot","type":"exact"}],"termid":"GO:1902549"}


id: PBO:0073151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog C, COPII coat complex component","termid":"PBO:0073151"}


id: PBO:0082970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; may interact with ribosomes, based on co-purification experiments; GIP3 has a paralog, HER1, that arose from the whole genome duplication","termid":"PBO:0082970"}


id: GO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"KDO metabolic process","type":"exact"},{"name":"KDO metabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0046400"}


id: GO:0014067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the phosphatidylinositol 3-kinase cascade.","definition_xrefs":["GOC:ef"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylinositol 3-kinase signaling (obsolete GO:0014067)","synonyms":[{"name":"down regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"down-regulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"downregulation of phosphatidylinositol 3-kinase cascade","type":"exact"},{"name":"inhibition of phosphatidylinositol 3-kinase cascade","type":"narrow"},{"name":"negative regulation of PI 3-kinase cascade","type":"exact"},{"name":"negative regulation of PI3K cascade","type":"exact"},{"name":"negative regulation of phosphatidylinositol 3-kinase cascade","type":"related"},{"name":"negative regulation of phosphoinositide 3-kinase cascade","type":"exact"}],"termid":"GO:0014067"}


id: PBO:0066985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 288","termid":"PBO:0066985"}


id: FYPO:0006507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which duplication of DNA sequences in the subtelomeric region occur more frequently than in wild type cells during G0 phase.","definition_xrefs":["PMID:29167439","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"increased subtelomeric DNA amplification during G0","synonyms":[{"name":"increased occurrence of subtelomeric DNA amplification during G0","type":"exact"},{"name":"increased subtelomeric DNA amplification during cell quiescence","type":"exact"},{"name":"increased subtelomeric DNA amplification during quiescence","type":"exact"},{"name":"increased subtelomeric DNA sequence duplication during G0","type":"exact"},{"name":"increased subtelomeric amplification during G0","type":"exact"}],"termid":"FYPO:0006507"}


id: PBO:0087041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087041"}


id: SO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_trimethylation_site","synonyms":[{"name":"H3K9 tri-methylation site","type":"exact"},{"name":"H3K9Me3","type":"related"}],"termid":"SO:0001707"}


id: MONDO:0009072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dandy-Walker malformation (DWM) is the association of three signs: hydrocephalus, partial or complete absence of the cerebellar vermis, and posterior fossa cyst contiguous with the fourth ventricle, presenting early in life with hydrocephalus, bulging occiput and posterior fossa signs such as cranial nerve palsies, nystagmus and ataxia.","definition_xrefs":["Orphanet:217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Dandy-Walker syndrome","secondary_identifiers":["MEDGEN:4150","NANDO:2200821","OMIM:220200","NORD:1032","MedDRA:10048411","MESH:D003616","SCTID:14447001","GARD:6242","NCIT:C75012","UMLS:C0010964","icd11.foundation:993088960","DOID:2785","EFO:1000890"],"synonyms":[{"name":"DW complex","type":"related"},{"name":"DWS","type":"related"},{"name":"Dandy Walker Malformation","type":"exact"},{"name":"Dandy-Walker complex","type":"related"},{"name":"Dandy-Walker malformation","type":"related"},{"name":"Dandy-Walker syndrome","type":"exact"},{"name":"Dandy-Walker syndrome or malformation (type of DW complex)","type":"related"},{"name":"Dandy-Walker syndrome, Isolated cases","type":"exact"},{"name":"Dandy-Walker variant (type of DW complex)","type":"related"},{"name":"atresia of foramina of Magendie and Luschka","type":"exact"},{"name":"isolated Dandy-Walker malformation","type":"related"},{"name":"mega cisterna magna (type of DW complex)","type":"related"}],"termid":"MONDO:0009072","xrefs":{"Monarch":{"xref_id":"0009072"}}}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115188],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: FYPO:0007878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","PMID:34608864","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein degradation during cellular response to MMS","type":"exact"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced protein degradation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0007878"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: GO:1905133
data:
  {"annotated_genes":["SJAG_04126","SJAG_01330","SJAG_04259","SJAG_01515","SJAG_01082","SJAG_03327","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105867,114095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116273,77147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[98199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[113380],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[100863],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["PMID:15620645","GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome separation during meiosis","type":"exact"},{"name":"down regulation of meiotic chromosome resolution","type":"exact"},{"name":"down regulation of meiotic chromosome separation","type":"exact"},{"name":"down-regulation of chromosome separation during meiosis","type":"exact"},{"name":"down-regulation of meiotic chromosome resolution","type":"exact"},{"name":"down-regulation of meiotic chromosome separation","type":"exact"},{"name":"downregulation of chromosome separation during meiosis","type":"exact"},{"name":"downregulation of meiotic chromosome resolution","type":"exact"},{"name":"downregulation of meiotic chromosome separation","type":"exact"},{"name":"inhibition of chromosome separation during meiosis","type":"narrow"},{"name":"inhibition of meiotic chromosome resolution","type":"narrow"},{"name":"inhibition of meiotic chromosome separation","type":"narrow"},{"name":"negative regulation of chromosome separation during meiosis","type":"exact"},{"name":"negative regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905133","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0059173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I-related","termid":"PBO:0059173"}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["Unimod:162","PubMed:12148805"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_00845","SJAG_01373","SJAG_00317","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[107166,103227,112061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: GO:0021731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trigeminal motor nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal motor nucleus development","termid":"GO:0021731"}


id: PBO:0071698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 4","termid":"PBO:0071698"}


id: MONDO:0022608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brittle bone disorder","termid":"MONDO:0011375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brittle bone syndrome lethal type","secondary_identifiers":["GARD:1018"],"termid":"MONDO:0022608","xrefs":{"Monarch":{"xref_id":"0022608"}}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: GO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cement gland over time, from its formation to the mature structure. The cement gland is a simple mucus-secreting organ positioned at the anterior of amphibious embryos. The cement gland attaches the newly hatched embryo to a support before the hatchling can swim well or feed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cement gland development","termid":"GO:0071570"}


id: GO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dAMP, deoxyadenosine monophosphate, to produce dADP. Addition of two phosphate groups produces dATP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dAMP phosphorylation","termid":"GO:0061565"}


id: PBO:0058121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4423","termid":"PBO:0058121"}


id: PBO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_latent_homology_relationship_with","termid":"PBO:0034267"}


id: PBO:0056667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 5","termid":"PBO:0056667"}


id: PBO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0035805"}


id: GO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell differentiation","termid":"GO:0045583"},{"relation_name":"positively_regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytotoxic T cell differentiation","synonyms":[{"name":"activation of cytotoxic T cell differentiation","type":"narrow"},{"name":"positive regulation of cytotoxic T cell development","type":"related"},{"name":"positive regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of cytotoxic T cell differentiation","type":"narrow"},{"name":"up regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"up-regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"upregulation of cytotoxic T cell differentiation","type":"exact"}],"termid":"GO:0045585"}


id: GO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A periodic process in which immature ovarian follicles degenerate and are subsequently re-absorbed.","definition_xrefs":["GOC:mtg_apoptosis","PMID:18638134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle atresia","termid":"GO:0001552"}


id: GO:0106394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"},{"relation_name":"negatively_regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of palmitic acid catabolic process","termid":"GO:0106394"}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: FYPO:0001953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal calcium import","synonyms":[{"name":"abnormal calcium import during mitotic cell cycle","type":"related"},{"name":"abnormal calcium import during vegetative growth","type":"exact"},{"name":"abnormal calcium import into cell","type":"exact"},{"name":"abnormal calcium ion import","type":"exact"},{"name":"abnormal calcium ion import across plasma membrane","type":"exact"},{"name":"abnormal cellular calcium import","type":"exact"}],"termid":"FYPO:0001953"}


id: MONDO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant spastic paraplegia type 9","termid":"MONDO:0015091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0004736","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant complex spastic paraplegia type 9B","secondary_identifiers":["UMLS:C5568979","GARD:21866","MEDGEN:1800402","Orphanet:447757"],"synonyms":[{"name":"AD-SPG9B","type":"exact"}],"termid":"MONDO:0018644","xrefs":{"Monarch":{"xref_id":"0018644"}}}


id: MONDO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the wall of the jejunum. Representative examples include adenoma, carcinoma, and lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neoplasm","secondary_identifiers":["MESH:D007580","NCIT:C8401","UMLS:C0022374","SCTID:126834003","DOID:3218","MEDGEN:7187"],"synonyms":[{"name":"jejunal tumor","type":"exact"},{"name":"jejunal tumour","type":"exact"},{"name":"jejunum neoplasm","type":"exact"},{"name":"jejunum neoplasm (disease)","type":"exact"},{"name":"jejunum tumor","type":"exact"},{"name":"jejunum tumour","type":"exact"},{"name":"neoplasm of jejunum","type":"exact"},{"name":"neoplasm of the jejunum","type":"exact"},{"name":"tumor of jejunum","type":"exact"},{"name":"tumor of the jejunum","type":"exact"},{"name":"tumour of jejunum","type":"exact"},{"name":"tumour of the jejunum","type":"exact"}],"termid":"MONDO:0002564","xrefs":{"Monarch":{"xref_id":"0002564"}}}


id: PBO:0026823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquitin-specific_protease_activity","termid":"PBO:0026823"}


id: GO:0043366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell.","definition_xrefs":["PMID:12220932","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta selection","termid":"GO:0043366"}


id: FYPO:0007717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium chloride. Cells stop growing (and may die) at a concentration of potassium nitrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to potassium nitrate","synonyms":[{"name":"hypersensitive to potassium nitrate","type":"exact"},{"name":"sensitive to KNO3","type":"exact"},{"name":"sensitive to potassium nitrate during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium nitrate during vegetative growth","type":"exact"}],"termid":"FYPO:0007717"}


id: FYECO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to H2O and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to H2O","termid":"FYECO:0000157"}


id: GO:0018911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.","definition_xrefs":["PMID:1987135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,4-trichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbz"],"synonyms":[{"name":"1,2,4-trichlorobenzene metabolic process","type":"broad"},{"name":"1,2,4-trichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018911"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: FYPO:0000388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of biofilm formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased biofilm formation","synonyms":[{"name":"biofilm formation: increased","type":"related"}],"termid":"FYPO:0000388"}


id: MONDO:0017936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign Samaritan congenital myopathy is a rare, genetic, skeletal muscle disease characterized by severe neonatal hypotonia with respiratory insufficiency, delay in motor milestones, and dysmorphic features including bitemporal narrowing, epicanthal folds and hypertelorism. Affected individuals show gradual improvement in hypotonia and muscle weakness within the first two years of life resulting in minimal clinical manifestations in adulthood.","definition_xrefs":["Orphanet:324581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"benign Samaritan congenital myopathy","secondary_identifiers":["MEDGEN:1666762","UMLS:C4749502","GARD:21445"],"termid":"MONDO:0017936","xrefs":{"Monarch":{"xref_id":"0017936"}}}


id: PBO:0052799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 39","termid":"PBO:0052799"}


id: MONDO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare form of bone dysplasia characterized by the features of osteogenesis imperfecta such as bone fragility associated with multiple fractures, bone deformities (metaphyseal irregularities and bowing of the long bones) and blue sclera, in association with growth failure, craniosynostosis, hydrocephalus, ocular proptosis, and distinctive facial features (e.g. frontal bossing, midface hypoplasia, and micrognathia).","definition_xrefs":["Orphanet:2050"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cole-Carpenter syndrome","secondary_identifiers":["NCIT:C130985","UMLS:C1862178","MESH:C535963","DOID:0060438","OMIMPS:112240","GARD:1425","icd11.foundation:1458793358","MEDGEN:350614"],"synonyms":[{"name":"Cole Carpenter syndrome","type":"related"},{"name":"bone fragility-craniosynostosis-proptosis-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0016085","xrefs":{"Monarch":{"xref_id":"0016085"}}}


id: PBO:0081034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12B","termid":"PBO:0081034"}


id: PBO:0084968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent arabinose dehydrogenase; involved in biosynthesis of dehydro-D-arabinono-1,4-lactone; similar to plant L-galactose dehydrogenase","termid":"PBO:0084968"}


id: GO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate biosynthetic process","synonyms":[{"name":"2-deoxyribose 1-phosphate anabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate biosynthesis","type":"exact"},{"name":"2-deoxyribose 1-phosphate formation","type":"exact"},{"name":"2-deoxyribose 1-phosphate synthesis","type":"exact"}],"termid":"GO:0006016"}


id: GO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + pentanoyl-CoA = 3-propylmalate + CoA + H+.","definition_xrefs":["RHEA:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"3-propylmalate synthase activity","secondary_identifiers":["KEGG_REACTION:R03040","EC:2.3.3.12","MetaCyc:3-PROPYLMALATE-SYNTHASE-RXN"],"synonyms":[{"name":"3-(n-propyl)-malate synthase activity","type":"related"},{"name":"3-propylmalate glyoxylate-lyase (CoA-pentanoylating) activity","type":"related"},{"name":"N-propylmalate synthase activity","type":"related"},{"name":"beta-n-propylmalate synthase activity","type":"related"},{"name":"pentanoyl-CoA:glyoxylate C-pentanoyltransferase (thioester-hydrolysing, 1-carboxybutyl-forming)","type":"related"}],"termid":"GO:0050442"}


id: PBO:0070479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 14","termid":"PBO:0070479"}


id: PBO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 divergent transcript","termid":"PBO:0060852"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: GO:0034125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"negatively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"negative regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034125"}


id: FYPO:0003938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is increased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth during glucose starvation","synonyms":[{"name":"fast cell population growth during glucose starvation","type":"narrow"},{"name":"increased cell population growth during glucose depletion","type":"exact"},{"name":"increased cell population growth during glucose deprivation","type":"exact"},{"name":"increased cell population growth during glucose limitation","type":"related"},{"name":"increased cell population growth in response to glucose starvation","type":"exact"},{"name":"resistant to glucose starvation","type":"related"}],"termid":"FYPO:0003938"}


id: PBO:0057688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1277","termid":"PBO:0057688"}


id: GO:1903849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","PMID:22269326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aorta morphogenesis","synonyms":[{"name":"activation of aorta morphogenesis","type":"narrow"},{"name":"up regulation of aorta morphogenesis","type":"exact"},{"name":"up-regulation of aorta morphogenesis","type":"exact"},{"name":"upregulation of aorta morphogenesis","type":"exact"}],"termid":"GO:1903849"}


id: GO:2001123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a maltoheptaose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltoheptaose catabolic process","synonyms":[{"name":"maltoheptaose catabolism","type":"exact"}],"termid":"GO:2001123"}


id: PBO:0027214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0027214"}


id: PBO:0084782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phenylalanyl-tRNA synthetase; active as a monomer, unlike the cytoplasmic subunit which is active as a dimer complexed to a beta subunit dimer; similar to the alpha subunit of E. coli phenylalanyl-tRNA synthetase","termid":"PBO:0084782"}


id: MONDO:0015397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete branchial arch or oral-acral syndrome (obsolete MONDO:0015334)","termid":"MONDO:0015334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic palpebral coloboma (obsolete MONDO:0020157)","termid":"MONDO:0020157"},{"relation_name":"excluded_subClassOf","term_name":"obsolete bulbar conjunctival dermoid or conjunctival dermolipoma (obsolete MONDO:0020205)","termid":"MONDO:0020205"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome without intellectual disability (obsolete MONDO:0043008)","termid":"MONDO:0043008"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"oculoauriculovertebral spectrum with radial defects","termid":"MONDO:0007712"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniofacial microsomia","secondary_identifiers":["MESH:D006053","DOID:2907","Orphanet:141132","SCTID:367462009","ICD9:759.89","MEDGEN:75554","OMIMPS:164210","UMLS:C0265240","NCIT:C84740","SCTID:109393007","Orphanet:141136","Orphanet:374","GARD:12074"],"synonyms":[{"name":"Expanded spectrum hemifacial microsomia","type":"exact"},{"name":"Expanded spectrum of hemifacial microsomia","type":"exact"},{"name":"Fav sequence","type":"related"},{"name":"Goldenhar disease","type":"exact"},{"name":"Goldenhar syndrome","type":"exact"},{"name":"HFM","type":"exact"},{"name":"Laterofacial microsomia","type":"exact"},{"name":"OAV (oculoauriculovertebral) dysplasia","type":"exact"},{"name":"OAV dysplasia","type":"exact"},{"name":"OAV spectrum","type":"exact"},{"name":"OAVD","type":"related"},{"name":"OAVS","type":"exact"},{"name":"facio-auriculo-vertebral spectrum","type":"exact"},{"name":"facioauriculovertebral dysplasia","type":"exact"},{"name":"facioauriculovertebral sequence","type":"related"},{"name":"first and second branchial arch syndrome","type":"exact"},{"name":"first arch syndrome","type":"exact"},{"name":"first branchial arch syndrome","type":"exact"},{"name":"hemifacial microsomia","type":"exact"},{"name":"oculo-auriculo-vertebral dysplasia","type":"related"},{"name":"oculo-auriculo-vertebral spectrum","type":"exact"},{"name":"oculoauriculovertebral dysplasia","type":"exact"},{"name":"oculoauriculovertebral spectrum","type":"exact"},{"name":"oculoauriculovertebral syndrome","type":"exact"},{"name":"otomandibular syndrome","type":"exact"},{"name":"unilateral or bilateral and asymmetric otomandibular dysplasia","type":"exact"}],"termid":"MONDO:0015397","xrefs":{"Monarch":{"xref_id":"0015397"}}}


id: GO:0110136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["PMID:19737519","PMID:24240281","GOC:rn","PMID:20542003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex remodeling","synonyms":[{"name":"protein-RNA complex remodelling","type":"exact"}],"termid":"GO:0110136"}


id: PBO:0058921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-3","termid":"PBO:0058921"}


id: PBO:0109050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism induced tumor activator 1","termid":"PBO:0109050"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: MOD:00854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine to L-lysinium (protonated L-lysine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-lysine (L-lysinium) residue","termid":"MOD:00854"}


id: PBO:0081957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZP3 pseudogene 1","termid":"PBO:0081957"}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: GO:0052832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["RHEA:30739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol monophosphate 3-phosphatase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN","Reactome:R-HSA-1855210"],"termid":"GO:0052832"}


id: PR:Q9P7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-like protein 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.08","secondary_identifiers":["UniProtKB:Q9P7X7"],"synonyms":[{"name":"Spom972h-ACTL6A","type":"exact"},{"name":"actin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-like protein arp4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"altered polarity protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X7"}


id: PBO:0036347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEUcine requiring","termid":"PBO:0036347"}


id: GO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000115","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis","termid":"GO:0035767"}


id: PBO:0113514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein; component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA; localizes to nucleolus and peroxisomes","termid":"PBO:0113514"}


id: PBO:0083687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase I, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression repressed in response to glucose; protein abundance increases in response to DNA replication stress; N-terminally propionylated in vivo; ENO1 has a paralog, ENO2, that arose from the whole genome duplication","termid":"PBO:0083687"}


id: PBO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A4","termid":"PBO:0046950"}


id: GO:1900074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"},{"relation_name":"negatively_regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of neuromuscular synaptic transmission","synonyms":[{"name":"down regulation of neuromuscular synaptic transmission","type":"related"},{"name":"down-regulation of neuromuscular synaptic transmission","type":"related"},{"name":"downregulation of neuromuscular synaptic transmission","type":"related"},{"name":"inhibition of neuromuscular synaptic transmission","type":"related"}],"termid":"GO:1900074"}


id: PBO:0059722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 30","termid":"PBO:0059722"}


id: MONDO:0013324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-posterior choanal atresia syndrome","secondary_identifiers":["MEDGEN:462225","Orphanet:99141","UMLS:C3150875","GARD:16898","OMIM:613611","ICD10CM:Q82.0"],"synonyms":[{"name":"CATLPH","type":"related"},{"name":"choanal atresia and lymphedema","type":"related"}],"termid":"MONDO:0013324","xrefs":{"Monarch":{"xref_id":"0013324"}}}


id: PBO:0091226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR proximal","termid":"PBO:0091226"}


id: GO:0007118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth at the tip of a bud, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell apical bud growth","synonyms":[{"name":"apical bud growth","type":"broad"}],"termid":"GO:0007118"}


id: PBO:0031588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biofilm_formation","termid":"PBO:0031588"}


id: GO:0034442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipoprotein oxidation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"regulates","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein oxidation","termid":"GO:0034442"}


id: GO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["PMID:12221011","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}


id: MONDO:0850082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bicoronal and metopic craniosynostosis","secondary_identifiers":["MEDGEN:1843005","GARD:22479","Orphanet:620198","UMLS:C5680394"],"termid":"MONDO:0850082","xrefs":{"Monarch":{"xref_id":"0850082"}}}


id: PBO:0117161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5RAP1 mitochondrial tRNA methylthiotransferase","termid":"PBO:0117161"}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: MONDO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia with myoclonic epilepsy","secondary_identifiers":["OMIM:270805","MESH:C564810","MEDGEN:338615","UMLS:C1849114"],"synonyms":[{"name":"spastic paraplegia with myoclonic epilepsy","type":"exact"}],"termid":"MONDO:0010048","xrefs":{"Monarch":{"xref_id":"0010048"}}}


id: GO:1904349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small intestine smooth muscle contraction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"is_a","term_name":"regulation of small intestine smooth muscle contraction","termid":"GO:1904347"},{"relation_name":"positively_regulates","term_name":"small intestine smooth muscle contraction","termid":"GO:1990770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestine smooth muscle contraction","synonyms":[{"name":"activation of small intestine smooth muscle contraction","type":"narrow"},{"name":"up regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"up-regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"upregulation of small intestine smooth muscle contraction","type":"exact"}],"termid":"GO:1904349"}


id: GO:0032151
data:
  {"annotated_genes":["SJAG_01277","SJAG_00663","SJAG_03374","SJAG_04375"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58214,99631,100479,103448],"is_not":false,"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during mitotic cell division.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_03374":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"mitotic septin complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032151","terms_by_termid":{"GO:0032151":null}}


id: PBO:0054412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1808","termid":"PBO:0054412"}


id: MONDO:0021752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achard–Thiers syndrome combines the features of adrenogenital syndrome and Cushing syndrome. It occurs mainly in post-menopausal women","definition_xrefs":["ISBN-13:978-0-7817-3063-1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Achard-Thiers syndrome","secondary_identifiers":["MESH:C536013","MEDGEN:124410","SCTID:34041001","UMLS:C0271732"],"synonyms":[{"name":"Achard Thiers syndrome","type":"related"},{"name":"diabetes in bearded women","type":"related"},{"name":"diabetic-bearded woman syndrome","type":"related"}],"termid":"MONDO:0021752","xrefs":{"Monarch":{"xref_id":"0021752"}}}


id: PBO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in response to nitrogen starvation","termid":"PBO:0001605"}


id: GO:0031063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylation (obsolete GO:0031063)","termid":"GO:0031063"}


id: GO:0031929
data:
  {"annotated_genes":["SJAG_03405","SJAG_02723","SJAG_03067","SJAG_04235","SJAG_01047","SJAG_00117","SJAG_05184","SJAG_04987","SJAG_03709","SJAG_05030","SJAG_01032","SJAG_05346","SJAG_01142","SJAG_00688","SJAG_04249","SJAG_03928","SJAG_00824","SJAG_03678","SJAG_04394","SJAG_01020","SJAG_04460","SJAG_02389","SJAG_02424","SJAG_00169","SJAG_02426","SJAG_03072","SJAG_03974","SJAG_04496","SJAG_03529","SJAG_00143","SJAG_00289","SJAG_04206","SJAG_06588","SJAG_03501","SJAG_00457","SJAG_01703","SJAG_00209","SJAG_04383","SJAG_03799","SJAG_02231","SJAG_00561","SJAG_03907","SJAG_00167","SJAG_03355","SJAG_01509","SJAG_00991","SJAG_04910","SJAG_02765","SJAG_01184","SJAG_02605","SJAG_03486","SJAG_03089","SJAG_00875","SJAG_01320","SJAG_03371","SJAG_01983","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103492,103839],"is_not":false,"summary":null,"term":"GO:0031929"},{"annotations":[74930],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0032007"},{"annotations":[102540,112748,108838,75309,100979,117655,75416,117848,92803,95595,87472,116651,62862,115731,106702,113572,109245,81709,98384,99083,114175,116087,104677],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[115876],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903940"},{"annotations":[74769,70926],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032008"},{"annotations":[75762,95596,93797,77164,112451,78215,77675,87765,110116,78554,74294],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[97253,106547,90665],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904515"},{"annotations":[117406,93531,115084,107404,92370],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"},{"annotations":[77373,106237,67140,112613,61382,98062,106212,81315,114527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038202"},{"annotations":[74354,79330,108139,78875,98888,106238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038203"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.","definition_xrefs":["PMID:12372295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00143":null,"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01020":null,"SJAG_01032":null,"SJAG_01047":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02605":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03067":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03529":null,"SJAG_03678":null,"SJAG_03709":null,"SJAG_03799":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04383":null,"SJAG_04394":null,"SJAG_04460":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_04987":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TOR signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"TOR signal transduction","type":"exact"},{"name":"TOR signaling cascade","type":"related"},{"name":"TOR signaling pathway","type":"exact"},{"name":"TOR signalling pathway","type":"exact"},{"name":"target of rapamycin signaling pathway","type":"exact"},{"name":"target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0031929","terms_by_termid":{"GO:0031929":null,"GO:0032007":null,"GO:0032008":null,"GO:0038202":null,"GO:0038203":null,"GO:1903432":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 alpha subunit","termid":"PBO:0001911"}


id: PBO:0071655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 19","termid":"PBO:0071655"}


id: PATO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving little resistance to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft","termid":"PATO:0000387"}


id: PR:Q09830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C4G8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.04","synonyms":[{"name":"Spom972h-SPAC4G8.04","type":"exact"}],"termid":"PR:Q09830"}


id: PBO:0046593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 3","termid":"PBO:0046593"}


id: PBO:0025523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome-associated protein Nrl1","termid":"PBO:0025523"}


id: PBO:0025502
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase deficiency","termid":"PBO:0025502"}


id: GO:1905338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26687354"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin unloading (obsolete GO:1905338)","synonyms":[{"name":"down regulation of cohesin unloading","type":"exact"},{"name":"down-regulation of cohesin unloading","type":"exact"},{"name":"downregulation of cohesin unloading","type":"exact"},{"name":"inhibition of cohesin unloading","type":"narrow"}],"termid":"GO:1905338"}


id: GO:1904241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"positively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904241"}


id: PBO:0078999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 6-1","termid":"PBO:0078999"}


id: PBO:0064593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member M","termid":"PBO:0064593"}


id: PBO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle","termid":"PBO:0031377"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: MONDO:0032777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 10","secondary_identifiers":["OMIM:618482","MEDGEN:1676426","DOID:0111296","GARD:18671","UMLS:C5193120"],"synonyms":[{"name":"GEFSP10","type":"related"},{"name":"GENERALIZED EPILEPSY WITH FEBRILE SEIZURES PLUS, TYPE 10","type":"related"},{"name":"Gefs+, Type 10","type":"related"}],"termid":"MONDO:0032777","xrefs":{"Monarch":{"xref_id":"0032777"}}}


id: MONDO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D003108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic disorder","secondary_identifiers":["UMLS:C0009373","MEDGEN:1049","SCTID:128524007","DOID:5353"],"synonyms":[{"name":"colon disease","type":"exact"},{"name":"colon disease or disorder","type":"exact"},{"name":"colon disorder","type":"exact"},{"name":"disease of colon","type":"exact"},{"name":"disease or disorder of colon","type":"exact"},{"name":"disorder of colon","type":"exact"}],"termid":"MONDO:0003409","xrefs":{"Monarch":{"xref_id":"0003409"}}}


id: FYPO:0006051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a lower extent than normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000121","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"decreased lipid droplet localization to FSM leading edge","type":"exact"},{"name":"decreased lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"decreased lipid particle localization to prospore membrane leading edge","type":"exact"},{"name":"reduced lipid droplet localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006051"}


id: PBO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyltyrosine oxidase; sporulation-specific microsomal enzyme involved in the production of N,N-bisformyl dityrosine required for spore wall maturation, homologous to cytochrome P-450s; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085016"}


id: GO:0052484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052484)","synonyms":[{"name":"negative regulation by organism of symbiont ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052484"}


id: PR:Q9HGQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.02","synonyms":[{"name":"Spom972h-SPAC212.02","type":"exact"}],"termid":"PR:Q9HGQ0"}


id: PBO:0077381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 121B","termid":"PBO:0077381"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN","EC:4.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PR:Q9C109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P27G11.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.16","synonyms":[{"name":"Spom972h-SPAP27G11.16","type":"exact"}],"termid":"PR:Q9C109"}


id: PBO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HS6ST2 antisense RNA 1","termid":"PBO:0050586"}


id: PBO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.50","termid":"PBO:0004245"}


id: GO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a bundle of His cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"bundle of His cell to Purkinje myocyte signaling","termid":"GO:0086028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bundle of His cell action potential","synonyms":[{"name":"bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086043"}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: MONDO:0019300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","secondary_identifiers":["Orphanet:79386"],"termid":"MONDO:0019300","xrefs":{"Monarch":{"xref_id":"0019300"}}}


id: GO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aerobic fructose catabolic process (obsolete GO:0019576)","synonyms":[{"name":"aerobic fructose breakdown","type":"exact"},{"name":"aerobic fructose catabolism","type":"exact"},{"name":"aerobic fructose degradation","type":"exact"}],"termid":"GO:0019576"}


id: PBO:0049894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 4","termid":"PBO:0049894"}


id: PBO:0044044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and serine rich nuclear protein 1","termid":"PBO:0044044"}


id: GO:0050286
data:
  {"annotated_genes":["SJAG_04964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99785],"is_not":false,"summary":null,"term":"GO:0050286"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + H2O = D-glucitol + phosphate.","definition_xrefs":["EC:3.1.3.50","RHEA:24580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SORBITOL-6-PHOSPHATASE-RXN","KEGG_REACTION:R02866"],"synonyms":[{"name":"sorbitol-6-phosphate phosphatase activity","type":"related"},{"name":"sorbitol-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050286","terms_by_termid":{"GO:0050286":null}}


id: PBO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein (predicted)","termid":"PBO:0003930"}


id: MONDO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell bile duct carcinoma","secondary_identifiers":["MEDGEN:209017","NCIT:C5777","UMLS:C0861861","DOID:5537"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003500","xrefs":{"Monarch":{"xref_id":"0003500"}}}


id: MONDO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningeal inflammation produced by cryptococcus neoformans, an encapsulated yeast that tends to infect individuals with acquired immunodeficiency syndrome and other immunocompromised states. The organism enters the body through the respiratory tract, but symptomatic infections are usually limited to the lungs and nervous system. The organism may also produce parenchymal brain lesions (torulomas). Clinically, the course is subacute and may feature headache; nausea; photophobia; focal neurologic deficits; seizures; cranial neuropathies; and hydrocephalus. (From Adams et al., Principles of Neurology, 6th ed, pp721-2)","definition_xrefs":["MESH:D016919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptococcosis","termid":"MONDO:0005724"},{"relation_name":"is_a","term_name":"fungal meningitis","termid":"MONDO:0006764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptococcal meningitis","secondary_identifiers":["SCTID:14232007","ICD9:321.0","NCIT:C174113","MEDGEN:88410","EFO:0007228","UMLS:C0085436","DOID:0080159"],"synonyms":[{"name":"Cryptococcus neoformans caused infectious meningitis","type":"exact"},{"name":"Cryptococcus neoformans infectious meningitis","type":"exact"}],"termid":"MONDO:0005723","xrefs":{"Monarch":{"xref_id":"0005723"}}}


id: PBO:0030666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_25S_rRNA_level","termid":"PBO:0030666"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: FYPO:0005289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of the mitotic actomyosin contractile ring in the correct location is abnormal.","definition_xrefs":["PMID:26132084","GO:0032189","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring displaced from midpoint","termid":"FYPO:0002026"},{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"actomyosin contractile ring sliding","synonyms":[{"name":"abnormal cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"actomyosin contractile ring sliding during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring sliding during vegetative growth","type":"exact"}],"termid":"FYPO:0005289"}


id: PBO:0111849
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUA domain","termid":"PBO:0111849"}


id: PBO:0119876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp6","termid":"PBO:0119876"}


id: MONDO:1011571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, domestic cat","secondary_identifiers":["OMIA:000181-9685"],"termid":"MONDO:1011571","xrefs":{"Monarch":{"xref_id":"1011571"}}}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: PBO:0114871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps3844","termid":"PBO:0114871"}


id: GO:0098916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from pre to post-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}


id: FYPO:0001965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to papulacandin D","synonyms":[{"name":"resistance to papulacandin D during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin D during vegetative growth","type":"exact"},{"name":"resistant to papulacandin D","type":"exact"}],"termid":"FYPO:0001965"}


id: FYPO:0004299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 5'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished polynucleotide 5'-phosphatase activity","synonyms":[{"name":"polynucleotide 5'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004299"}


id: PBO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 29","termid":"PBO:0080059"}


id: PBO:0057937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3663","termid":"PBO:0057937"}


id: PBO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CET1 when coexpressed with pombe ceg1","termid":"PBO:0015229"}


id: GO:0004610
data:
  {"annotated_genes":["SJAG_00978","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72752,73689],"is_not":false,"summary":null,"term":"GO:0004610"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate.","definition_xrefs":["RHEA:23804","EC:5.4.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00978":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"phosphoacetylglucosamine mutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-446185","MetaCyc:PHOSACETYLGLUCOSAMINEMUT-RXN","KEGG_REACTION:R08193"],"synonyms":[{"name":"N-acetyl-D-glucosamine 1,6-phosphomutase activity","type":"related"},{"name":"N-acetyl-alpha-D-glucosamine 1,6-phosphomutase activity","type":"related"},{"name":"N-acetylglucosamine-phosphate mutase activity","type":"related"},{"name":"acetylaminodeoxyglucose phosphomutase activity","type":"related"},{"name":"acetylglucosamine phosphomutase activity","type":"related"},{"name":"phospho-N-acetylglucosamine mutase activity","type":"related"}],"termid":"GO:0004610","terms_by_termid":{"GO:0004610":null}}


id: PBO:0087294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single stranded DNA-binding protein found at TG1-3 telomere G-tails; key roles in regulation of telomerase, telomere end protection, conventional telomere replication; regulates telomere replication through recruitment of specific sub-complexes, essential function is telomere capping; forms homodimer via N-terminus; disruption of dimerization leads to short telomeres; autophagy and proteasome are involved in Cdc13p degradation; differentially phosphorylated through cell cycle","termid":"PBO:0087294"}


id: PBO:0074441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 42","termid":"PBO:0074441"}


id: MONDO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eyelid infestation","secondary_identifiers":["ICD9:373.6","MEDGEN:509836","DOID:13823","SCTID:193922006","UMLS:C0155183"],"synonyms":[{"name":"parasitic eyelid infestation","type":"exact"},{"name":"parasitic infestation of eyelid","type":"exact"}],"termid":"MONDO:0001812","xrefs":{"Monarch":{"xref_id":"0001812"}}}


id: GO:0016722
data:
  {"annotated_genes":["SJAG_04743","SJAG_04042","SJAG_04677","SJAG_04459","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76320,80848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"},{"annotations":[80452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000293"},{"annotations":[59209,79494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the oxidation state of metal ion is altered.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04042":null,"SJAG_04459":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:1.16.-.-","Reactome:R-HSA-917805"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions","type":"related"},{"name":"oxidoreductase activity, reducing metal ions","type":"related"}],"termid":"GO:0016722","terms_by_termid":{"GO:0000293":null,"GO:0004322":null,"GO:0030586":null}}


id: PBO:0028026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_meiosis_II","termid":"PBO:0028026"}


id: PBO:0035893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification_during_vegetative_growth","termid":"PBO:0035893"}


id: PBO:0065477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 14","termid":"PBO:0065477"}


id: PR:Q09722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit M that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00150","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit M (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.03","secondary_identifiers":["UniProtKB:Q09722"],"synonyms":[{"name":"Spom972h-EIF3M","type":"exact"},{"name":"eIF3m (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09722"}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: MONDO:0014041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 19","secondary_identifiers":["UMLS:C3554495","MEDGEN:767409","OMIM:615091"],"synonyms":[{"name":"AUTS19","type":"related"},{"name":"autism, susceptibility to, 19","type":"exact"},{"name":"autism, susceptibility to, type 19","type":"exact"},{"name":"susceptibility to autism 19","type":"related"}],"termid":"MONDO:0014041","xrefs":{"Monarch":{"xref_id":"0014041"}}}


id: PBO:0068393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 213","termid":"PBO:0068393"}


id: PBO:0114501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master meiotic regulator active only during meiotic events; activates transcription of early meiotic genes through interaction with Ume6p; regulator of meiotic commitment; phosphorylated by Rim11p; degraded by the 26S proteasome following phosphorylation by Ime2p; transcription is negatively regulated in cis by the IRT1 long noncoding antisense RNA","termid":"PBO:0114501"}


id: GO:0014711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"}


id: PBO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint kinase Bub1","termid":"PBO:0018175"}


id: GO:0005745
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77643],"is_not":false,"summary":null,"term":"GO:0005745"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane that is involved in mitochondrial protein turnover and in processing of proteins imported into mitochondria.","definition_xrefs":["GOC:mcc","PMID:12417197","PMID:21147776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"m-AAA complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005745","terms_by_termid":{"GO:0005745":null}}


id: GO:1904117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["PMID:22811487","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to vasopressin","termid":"GO:1904116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vasopressin","termid":"GO:1904117"}


id: PBO:0053841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1107","termid":"PBO:0053841"}


id: FYPO:0004704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"interphase microtubules present in increased numbers","synonyms":[{"name":"cytoplasmic microtubules present in greater numbers","type":"exact"},{"name":"cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"increased level of interphase MTs","type":"exact"},{"name":"interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"interphase microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004704"}


id: MONDO:0020248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous syneresis","termid":"MONDO:0001377"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreoretinal degeneration","secondary_identifiers":["Orphanet:98670","GARD:5506","HP:0007964","ICD10CM:H35.5","MEDGEN:87480","SCTID:247182006","UMLS:C0344290"],"synonyms":[{"name":"degenerative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0020248","xrefs":{"Monarch":{"xref_id":"0020248"}}}


id: PBO:0048992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC3 antisense RNA 1","termid":"PBO:0048992"}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: FYPO:0007359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of heavy water (D2O) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to heavy water","synonyms":[{"name":"resistance to D2O","type":"exact"},{"name":"resistance to dideuterium oxide","type":"exact"},{"name":"resistance to heavy water during mitotic cell cycle","type":"related"},{"name":"resistance to heavy water during vegetative growth","type":"exact"},{"name":"resistant to heavy water","type":"exact"}],"termid":"FYPO:0007359"}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: MONDO:0005493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anoxic encephalopathy resulting from acute CO intoxication, developing within 2-6 weeks of the poisoning event","definition_xrefs":["EFO:0005534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"carbon monoxide poisoning","termid":"MONDO:0800373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon monoxide-induced delayed encephalopathy","synonyms":[{"name":"delayed encephalopathy after acute carbon monoxide poisoning","type":"exact"}],"termid":"MONDO:0005493","xrefs":{"Monarch":{"xref_id":"0005493"}}}


id: PBO:0045528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 1","termid":"PBO:0045528"}


id: MONDO:0019088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-transplant lymphoproliferative disorder (PTLD) is a polyclonal (benign) or clonal (malignant) proliferation of lymphoid cells that develops as a consequence of immunosuppression in a recipient of a solid organ or bone marrow allograft. PTLDs comprise a spectrum ranging from early, Epstein-Barr virus (EBV)-driven polyclonal lymphoid proliferations to EBV-positive or EBV- negative lymphomas of predominantly B-cell or less often T-cell type. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"excluded_subClassOf","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"},{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transplant lymphoproliferative disease","secondary_identifiers":["UMLS:C0432487","MedDRA:10051358","MEDGEN:98160","NORD:1950","Orphanet:70568","SCTID:254290004","ICDO:9971/1","NCIT:C4727","GARD:9553"],"synonyms":[{"name":"PTLD","type":"exact"},{"name":"post-transplant lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019088","xrefs":{"Monarch":{"xref_id":"0019088"}}}


id: PATO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spur shaped","termid":"PATO:0002540"}


id: GO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a neurohypophyseal hormone, any of a family of structurally and functionally related nonapeptides that are synthesized as part of a larger precursor molecule comprising a signal peptide, the nonapeptide hormone, and a neurophysin.","definition_xrefs":["PMID:19243634","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0003674","GO:0005488","GO:0140677"],"is_obsolete":false,"name":"neurohypophyseal hormone activity","synonyms":[{"name":"neurohypophysial hormone activity","type":"exact"}],"termid":"GO:0005185"}


id: MONDO:0850107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious cerebellitis","secondary_identifiers":["Orphanet:624244","UMLS:C5575321","GARD:22502","MEDGEN:1843009"],"termid":"MONDO:0850107","xrefs":{"Monarch":{"xref_id":"0850107"}}}


id: PBO:0119959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase acyl carrier protein","termid":"PBO:0119959"}


id: PBO:0043054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like EF-hand protein 2","termid":"PBO:0043054"}


id: MONDO:0006502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition.","definition_xrefs":["NCIT:C3353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute respiratory distress syndrome","secondary_identifiers":["EFO:1000637","icd11.foundation:1189702844","UMLS:C2887484","ICD10CM:J80","MEDGEN:1812214","MedDRA:10001052"],"synonyms":[{"name":"ALI","type":"related"},{"name":"ARDS","type":"exact"},{"name":"Stiff lung","type":"related"},{"name":"acute lung injury","type":"related"},{"name":"acute respiratory distress syndrome","type":"exact"},{"name":"increased-permeability pulmonary edema","type":"related"},{"name":"increased-permeability pulmonary oedema","type":"related"},{"name":"non-cardiogenic pulmonary edema","type":"related"},{"name":"non-cardiogenic pulmonary oedema","type":"related"},{"name":"shock lung","type":"exact"}],"termid":"MONDO:0006502","xrefs":{"Monarch":{"xref_id":"0006502"}}}


id: PBO:0002925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II light chain","termid":"PBO:0002925"}


id: PBO:0076961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3 like","termid":"PBO:0076961"}


id: PR:O14338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ebs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C2F12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.03c","synonyms":[{"name":"Spom972h-ebs1","type":"exact"}],"termid":"PR:O14338"}


id: MOD:01960
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-glutamine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide.","definition_xrefs":["PubMed:11796730","RESID:AA0605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamine residue","termid":"MOD:02069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"tris-L-cysteinyl L-glutamin-O6-yl tetrairon tetrasulfide","type":"exact"},{"name":"tris-mu3-sulfido-tris(cysteinato)-1kappaS,2kappaS,3kappaS-glutaminato-4kappaN(5)-tetrairon","type":"exact"}],"termid":"MOD:01960"}


id: PBO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030502"}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: MONDO:0021287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the epiglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epiglottis cancer","termid":"MONDO:0004473"},{"relation_name":"is_a","term_name":"larynx carcinoma in situ","termid":"MONDO:0004696"},{"relation_name":"is_a","term_name":"carcinoma in situ of hypopharynx","termid":"MONDO:0021288"},{"relation_name":"is_a","term_name":"carcinoma in situ of oropharynx","termid":"MONDO:0021298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of epiglottis","secondary_identifiers":["NCIT:C4592","SCTID:92584005","UMLS:C0347103","icd11.foundation:238950969","MEDGEN:87571"],"synonyms":[{"name":"Epiglottis carcinoma in situ","type":"exact"},{"name":"carcinoma in situ of epiglottis","type":"exact"},{"name":"carcinoma in situ of the Epiglottis","type":"exact"},{"name":"epiglottic carcinoma in situ","type":"exact"},{"name":"epiglottis carcinoma in situ","type":"exact"},{"name":"epiglottis in situ carcinoma","type":"exact"},{"name":"stage 0 epiglottic carcinoma","type":"exact"},{"name":"stage 0 epiglottic carcinoma aJCC v6","type":"exact"},{"name":"stage 0 epiglottic carcinoma aJCC v6, v7, and v8","type":"exact"},{"name":"stage 0 epiglottic carcinoma aJCC v7","type":"exact"},{"name":"stage 0 epiglottic carcinoma aJCC v8","type":"exact"},{"name":"stage 0 epiglottic throat cancer","type":"exact"},{"name":"stage 0 epiglottis carcinoma","type":"exact"}],"termid":"MONDO:0021287","xrefs":{"Monarch":{"xref_id":"0021287"}}}


id: GO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:kp","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sorocarp stalk cell differentiation","termid":"GO:0031285"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"activation of stalk cell differentiation","type":"narrow"},{"name":"positive regulation of stalk cell differentiation","type":"exact"},{"name":"stimulation of stalk cell differentiation","type":"narrow"},{"name":"up regulation of stalk cell differentiation","type":"exact"},{"name":"up-regulation of stalk cell differentiation","type":"exact"},{"name":"upregulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031287"}


id: PBO:0070555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 21","termid":"PBO:0070555"}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:yaf","PMID:10372961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: MONDO:0700220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a solid organ or bone marrow transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to transplantation","secondary_identifiers":["MEDGEN:745174","Orphanet:306644","UMLS:C1998172","GARD:21259"],"termid":"MONDO:0700220","xrefs":{"Monarch":{"xref_id":"0700220"}}}


id: PBO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis-specific spindle pole body WD repeat protein Wdr8","termid":"PBO:0018266"}


id: PBO:0029201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amphotericin_B","termid":"PBO:0029201"}


id: PBO:0012239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine-related protein kinase","termid":"PBO:0012239"}


id: PBO:0074505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 4","termid":"PBO:0074505"}


id: MONDO:0957576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkinson disease 25, autosomal recessive early-onset, with impaired intellectual development","secondary_identifiers":["DOID:0070486","UMLS:C5882680","OMIM:620482","MEDGEN:1845571"],"termid":"MONDO:0957576","xrefs":{"Monarch":{"xref_id":"0957576"}}}


id: FYPO:0004941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of mannose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio.","definition_xrefs":["PomBase:mah","PMID:11015724","PMID:8782411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0003290","FYPO:0001985"],"is_obsolete":false,"name":"decreased mannose level in glycoprotein glycan","synonyms":[{"name":"decreased mannose level in glycoprotein oligosaccharide","type":"related"},{"name":"reduced mannose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0004941"}


id: MONDO:0014881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"transketolase deficiency","secondary_identifiers":["GARD:17894","OMIM:617044","MEDGEN:1814561","UMLS:C5700245","Orphanet:488618"],"synonyms":[{"name":"SDDHD","type":"related"},{"name":"TKT deficiency","type":"exact"},{"name":"short stature, developmental delay, and congenital heart defects","type":"related"},{"name":"short stature-developmental delay-congenital heart defect syndrome","type":"exact"}],"termid":"MONDO:0014881","xrefs":{"Monarch":{"xref_id":"0014881"}}}


id: GO:0033459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033459"}


id: MONDO:0003905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into endodermal type glandular structures.","definition_xrefs":["NCIT:C39988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, glandular pattern","secondary_identifiers":["UMLS:C1518747","DOID:6511","MEDGEN:309520"],"synonyms":[{"name":"glandular pattern ovarian yolk sac tumor","type":"related"},{"name":"glandular pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, glandular pattern","type":"exact"}],"termid":"MONDO:0003905","xrefs":{"Monarch":{"xref_id":"0003905"}}}


id: PBO:0049477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.1 linker histone, cluster member","termid":"PBO:0049477"}


id: FYPO:0003400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S ribosomal RNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal 20S rRNA precursor level","synonyms":[{"name":"normal 20S rRNA precursor accumulation","type":"related"},{"name":"normal 20S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"normal 20S rRNA precursor level during vegetative growth","type":"exact"},{"name":"normal 20S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003400"}


id: GO:0097179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains a protease inhibitor and a protease; formation of the complex inhibits protease activity.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor complex","termid":"GO:1904090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protease inhibitor complex","synonyms":[{"name":"peptidase inhibitor complex","type":"broad"}],"termid":"GO:0097179"}


id: PBO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: GO:0080132
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74108],"is_not":false,"summary":null,"term":"GO:0080132"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of the C-2 position in a fatty acid. The 2-hydroxylation may occur on free fatty acids or within the fatty acyl chain of a sphingolipid.","definition_xrefs":["PMID:36902339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid 2-hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5693761"],"synonyms":[{"name":"fatty acid alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0080132","terms_by_termid":{"GO:0080132":null}}


id: GO:0051182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a coenzyme into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A coenzyme is any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme transport (obsolete GO:0051182)","termid":"GO:0051182"}


id: MOD:00046
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592","SJAG_03012"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82553,82554,118987,118988,118989,118990,119051,119052],"is_not":false,"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.","definition_xrefs":["PubMed:4065410","PubMed:12923550","PubMed:8061611","ChEBI:15811","Unimod:21#S","RESID:AA0037","OMSSA:6","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"ACT_SITE Phosphoserine intermediate","type":"exact"},{"name":"MOD_RES Phosphoserine","type":"exact"},{"name":"O-phospho-L-serine","type":"exact"},{"name":"O-phosphonoserine","type":"exact"},{"name":"O-phosphorylated L-serine","type":"exact"},{"name":"O3-phosphoserine","type":"exact"},{"name":"OPSer","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Seryl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylations","type":"exact"},{"name":"serine phosphate ester","type":"exact"}],"termid":"MOD:00046","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: MOD:00878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod - Mechanism of the reaction of imidoesters with amines","definition_xrefs":["Unimod:456","URL:http://dx.doi.org/10.1021/ja00877a017","PubMed:7171546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate doubly attached","synonyms":[{"name":"Both ends of crosslink attached to same peptide","type":"related"},{"name":"Xlink:DMP","type":"related"}],"termid":"MOD:00878"}


id: FYPO:0007152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camphor. Cells stop growing (and may die) at a concentration of camphor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to camphor","synonyms":[{"name":"hypersensitive to camphor","type":"exact"},{"name":"sensitive to camphor during mitotic cell cycle","type":"related"},{"name":"sensitive to camphor during vegetative growth","type":"exact"}],"termid":"FYPO:0007152"}


id: PBO:0046264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 3","termid":"PBO:0046264"}


id: PBO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 49","termid":"PBO:0039553"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: GO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"positively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage antigen processing and presentation","synonyms":[{"name":"activation of macrophage antigen processing and presentation","type":"narrow"},{"name":"stimulation of macrophage antigen processing and presentation","type":"narrow"},{"name":"up regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"up-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"upregulation of macrophage antigen processing and presentation","type":"exact"}],"termid":"GO:0002618"}


id: MONDO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scleroderma (obsolete MONDO:0002906)","termid":"MONDO:0002906","xrefs":{"Monarch":{"xref_id":"0002906"}}}


id: MONDO:0013352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-severe speech delay-mild dysmorphism syndrome, also known as intellectual disability with language impairment and with or without autistic features, is adisorder characterized by global developmental delay with moderate to severe speech delay thataffects expressive speech. Most patients have difficulty articulating words. Common signs and symptoms include broad forehead, downslanting palpebral fissures, short nose with broad tip, head appearing too large for the body, frontal hair upsweep, and bulging digit pads anddelatyed gross motor skills. Some patients have autistic features and/or behavioral problems. Congenital malformations may be associated. All reported cases have occurred de novo (without any cases in the family). It is caused by alterations (mutations) in the caused by heterozygous mutation in the FOXP1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","secondary_identifiers":["OMIM:613670","Orphanet:391372","GARD:12501","UMLS:C4013764","MEDGEN:862201","DOID:0111331"],"synonyms":[{"name":"FOXP1 related global developmental delay, intellectual disability and speech defects","type":"related"},{"name":"intellectual disability with language impairment and with or without autistic features","type":"related"},{"name":"intellectual disability-severe speech delay-mild dysmorphism syndrome","type":"exact"},{"name":"mental retardation with language impairment and with or without autistic features","type":"related"}],"termid":"MONDO:0013352","xrefs":{"Monarch":{"xref_id":"0013352"}}}


id: MONDO:0024746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma composed of immature, fetal-type tissues.","definition_xrefs":["NCIT:C4286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immature teratoma","secondary_identifiers":["MEDGEN:90798","NANDO:2200106","UMLS:C0334520","ICDO:9080/3"],"synonyms":[{"name":"embryonal teratoma","type":"exact"},{"name":"hrade 2 Teratoma","type":"exact"},{"name":"immature teratoma","type":"exact"}],"termid":"MONDO:0024746","xrefs":{"Monarch":{"xref_id":"0024746"}}}


id: GO:0009211
data:
  {"annotated_genes":["SJAG_04627","SJAG_04665","SJAG_04487","SJAG_00885","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72796,70219,91913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[81277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[106812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009211","terms_by_termid":{"GO:0006235":null,"GO:0009212":null,"GO:0046081":null}}


id: PBO:0047699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH family member 2","termid":"PBO:0047699"}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:28151650","PMID:17020874","PMID:16005298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: PBO:0083741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083741"}


id: SO:1000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal structure variation whereby more than one chromosome is involved.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"interchromosomal","termid":"SO:0001511"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_mutation","synonyms":[{"name":"interchromosomal mutation","type":"exact"}],"termid":"SO:1000031"}


id: PBO:0056731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEST intronic transcript 1, antisense RNA","termid":"PBO:0056731"}


id: PBO:0080230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VKORC1 pseudogene 1","termid":"PBO:0080230"}


id: GO:0048716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of labrum are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"labrum development","termid":"GO:0048726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum morphogenesis","termid":"GO:0048716"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: PBO:0048218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 2","termid":"PBO:0048218"}


id: PBO:0077360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 100","termid":"PBO:0077360"}


id: GO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"spectrin binding","termid":"GO:0030507"}


id: GO:0035853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the spindle midzone. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:vw","GOC:mah","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chromosome passenger complex localization to spindle midzone","synonyms":[{"name":"CPC complex localization to spindle midzone","type":"exact"},{"name":"CPC localization to spindle midzone","type":"exact"},{"name":"chromosomal passenger complex localization to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localisation to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localization to central spindle","type":"exact"},{"name":"chromosome passenger complex localization to spindle equator","type":"exact"}],"termid":"GO:0035853"}


id: MONDO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectopic pregnancy characterized by the implantation of the embryo in the peritoneal cavity or abdominal organs.","definition_xrefs":["NCIT:C92921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal ectopic pregnancy","secondary_identifiers":["MEDGEN:46072","MESH:D011269","SCTID:82661006","UMLS:C0032984"],"synonyms":[{"name":"Pregnancies, abdominal","type":"related"},{"name":"abdomen ectopic pregnancy","type":"exact"},{"name":"abdominal Pregnancies","type":"related"},{"name":"abdominal pregnancy","type":"exact"},{"name":"ectopic pregnancy of abdomen","type":"exact"},{"name":"intra-abdominal pregnancy","type":"exact"}],"termid":"MONDO:0043759","xrefs":{"Monarch":{"xref_id":"0043759"}}}


id: GO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a dendrite, excluding the surrounding plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dendrite cytoplasm","synonyms":[{"name":"dendritic cytoplasm","type":"exact"}],"termid":"GO:0032839"}


id: PBO:0072238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 13","termid":"PBO:0072238"}


id: FYPO:0003780
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118792],"is_not":false,"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":1,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta"],"synonyms":[{"name":"normal nuclear envelope morphology during mitosis during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during mitotic M phase","type":"related"},{"name":"normal nuclear envelope morphology during mitotic nuclear division","type":"exact"},{"name":"normal nuclear membrane morphology during mitosis","type":"narrow"}],"termid":"FYPO:0003780","terms_by_termid":{"FYPO:0003780":null}}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: PBO:0066473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase","termid":"PBO:0066473"}


id: MONDO:0024552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the HCCS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 1","secondary_identifiers":["OMIM:309801","DOID:0111808","UMLS:C0796070","MEDGEN:163210"],"synonyms":[{"name":"HCCS microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"LSDMCA1","type":"related"},{"name":"Midas syndrome","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 1","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 1, X-linked dominant","type":"exact"},{"name":"microphthalmia with linear skin defects","type":"related"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in HCCS","type":"exact"},{"name":"microphthalmia, dermal aplasia, and sclerocornea","type":"related"},{"name":"microphthalmia, syndromic 7","type":"related"}],"termid":"MONDO:0024552","xrefs":{"Monarch":{"xref_id":"0024552"}}}


id: GO:0038122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 5 (CCL5) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 5 receptor activity","synonyms":[{"name":"CCL5 receptor activity","type":"exact"},{"name":"RANTES receptor activity","type":"exact"},{"name":"small inducible cytokine A5 receptor activity","type":"exact"}],"termid":"GO:0038122"}


id: PBO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein (predicted)","termid":"PBO:0000295"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: PBO:0079830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream master lncRNA of the inflammatory chemokine locus","termid":"PBO:0079830"}


id: GO:0051862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of molecules into symbiont","synonyms":[{"name":"transport of molecules into symbiont","type":"exact"}],"termid":"GO:0051862"}


id: PBO:0058426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4796","termid":"PBO:0058426"}


id: MONDO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioma arising from the central nervous system. This category includes diffuse astrocytoma, ependymoma, oligodendroglioma, and oligoastrocytoma.","definition_xrefs":["NCIT:C132505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grade II glioma","secondary_identifiers":["MEDGEN:1391502","UMLS:C4330050"],"synonyms":[{"name":"WHO grade II glioma","type":"exact"},{"name":"grade II glioma","type":"exact"}],"termid":"MONDO:0021639","xrefs":{"Monarch":{"xref_id":"0021639"}}}


id: MOD:01240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of leucyl-arginyl-glycyl-glycine, the C-terminal tetrapeptide of ubiquitin.","definition_xrefs":["Unimod:535","PubMed:10504701"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitination signature tetrapeptidyl lysine","synonyms":[{"name":"LeuArgGlyGly","type":"related"},{"name":"Ubiquitination","type":"related"}],"termid":"MOD:01240"}


id: PBO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 14","termid":"PBO:0070861"}


id: FYPO:0000096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cadmium. Cells stop growing (and may die) at a concentration of cadmium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cadmium","synonyms":[{"name":"hypersensitive to cadmium","type":"exact"},{"name":"sensitive to cadmium during mitotic cell cycle","type":"related"},{"name":"sensitive to cadmium during vegetative growth","type":"exact"},{"name":"sensitive to cadmium ions","type":"exact"}],"termid":"FYPO:0000096"}


id: PBO:0089948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein","termid":"PBO:0089948"}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: PR:Q92344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta5 gene.","definition_xrefs":["UniProtKB:Q92344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.06","synonyms":[{"name":"Spom972h-fta5","type":"exact"},{"name":"sim4 complex subunit fta5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92344"}


id: PBO:0064275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H1","termid":"PBO:0064275"}


id: GO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex possessing three kinds of enzymes that catalyze the chain reactions in the fatty acid beta-oxidation cycle, enoyl-CoA hydratase (ECH), 3-hydroxyacyl-CoA dehydrogenase (HACD), and acetyl-CoA C-acyltransferase (KACT).","definition_xrefs":["PMID:12115060","PMID:16472743","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"}


id: PBO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-dopachrome tautomerase","termid":"PBO:0044693"}


id: GO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood pressure in another organism (obsolete GO:0044496)","synonyms":[{"name":"negative regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044496"}


id: PBO:0079617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L2 (pseudogene)","termid":"PBO:0079617"}


id: GO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-aspartate + H2O = N-formyl-L-aspartate + NH3.","definition_xrefs":["EC:3.5.3.5","MetaCyc:FORMIMINOASPARTATE-DEIMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formimidoylaspartate deiminase activity","secondary_identifiers":["RHEA:13661"],"synonyms":[{"name":"N-formimidoyl-L-aspartate iminohydrolase activity","type":"related"},{"name":"formiminoaspartate deiminase activity","type":"exact"}],"termid":"GO:0050414"}


id: MONDO:1012860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal locomotion defined by the loss of typical jumping and blindness at birth due to retinal dysplasia and early-onset cataracts that occurs in rabbits due to a mutation in the RORB gene.","definition_xrefs":["PMID:33764968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal gait, retinal dysplasia, cataracts, RORB-related, rabbit","secondary_identifiers":["OMIA:002317-9986"],"termid":"MONDO:1012860","xrefs":{"Monarch":{"xref_id":"1012860"}}}


id: GO:0141169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that involves a DNA glycosylase that directly excises 5-methylcytosine (5-meC) to initiate its replacement with unmethylated cytosine through base excision repair. This pathway is known to occur in plants. In addition to CG sites, plants also methylate cytosines within CHH and CNG sequences.","definition_xrefs":["PMID:36478523","PMID:21862972","PMID:31546611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","type":"related"}],"termid":"GO:0141169"}


id: MONDO:0007805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the CDSN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex of the scalp","termid":"MONDO:0019575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 2","secondary_identifiers":["DOID:0110699","GARD:18093","MEDGEN:374435","MESH:C564143","OMIM:146520","UMLS:C1840299"],"synonyms":[{"name":"CDSN hypotrichosis","type":"exact"},{"name":"HYPT2","type":"exact"},{"name":"Htss","type":"related"},{"name":"Spanish type hypotrichosis","type":"exact"},{"name":"hypotrichosis 2","type":"exact"},{"name":"hypotrichosis caused by mutation in CDSN","type":"exact"},{"name":"hypotrichosis simplex of the scalp 1","type":"exact"},{"name":"hypotrichosis type 2","type":"exact"},{"name":"hypotrichosis, Spanish type","type":"related"},{"name":"hypt2","type":"exact"}],"termid":"MONDO:0007805","xrefs":{"Monarch":{"xref_id":"0007805"}}}


id: PBO:0063472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 2","termid":"PBO:0063472"}


id: PBO:0038761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 6","termid":"PBO:0038761"}


id: PBO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 1","termid":"PBO:0072712"}


id: FYPO:0003586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is abnormal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal replication fork processing","synonyms":[{"name":"abnormal HR-mediated fork restart","type":"related"},{"name":"abnormal collapsed replication fork processing","type":"exact"},{"name":"abnormal recovery from replication fork arrest","type":"exact"},{"name":"abnormal recovery from replication fork stalling","type":"exact"},{"name":"abnormal replication fork processing during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork processing during vegetative growth","type":"exact"},{"name":"abnormal replication fork restart","type":"related"},{"name":"abnormal replication restart","type":"related"}],"termid":"FYPO:0003586"}


id: MONDO:0008122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olivopontocerebellar atrophy 5 (obsolete MONDO:0008122)","termid":"MONDO:0008122","xrefs":{"Monarch":{"xref_id":"0008122"}}}


id: PBO:0041549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 54","termid":"PBO:0041549"}


id: PBO:0062194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 3 pseudogene","termid":"PBO:0062194"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: PBO:0076272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1","termid":"PBO:0076272"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: PBO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2 (predicted)","termid":"PBO:0003336"}


id: PBO:0071985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 14","termid":"PBO:0071985"}


id: PR:O94394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C126.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.01c","synonyms":[{"name":"Spom972h-SPCC126.01c","type":"exact"}],"termid":"PR:O94394"}


id: PBO:0041034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2D, pseudogene","termid":"PBO:0041034"}


id: MONDO:0012393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital brain dysgenesis due to glutamine synthetase deficiency","secondary_identifiers":["MEDGEN:400638","DOID:0070544","OMIM:610015","icd11.foundation:238162640","GARD:9848","MESH:C536832","UMLS:C1864910","Orphanet:71278"],"synonyms":[{"name":"congenital brain dysgenesis due to glutamine synthetase deficiency","type":"exact"},{"name":"congenital glutamine deficiency","type":"related"},{"name":"glutamine deficiency, congenital","type":"related"},{"name":"glutamine synthase deficiency, congenital systemic","type":"related"},{"name":"glutamine synthetase deficiency, congenital systemic","type":"related"},{"name":"inherited GS deficiency","type":"exact"},{"name":"inherited glutamine synthetase deficiency","type":"exact"}],"termid":"MONDO:0012393","xrefs":{"Monarch":{"xref_id":"0012393"}}}


id: MONDO:0100143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that involves respiratory failure, septic shock, and/or multiple organ dysfunction.","gene_count":0,"genotype_count":0,"name":"obsolete critical COVID-19 infection (obsolete MONDO:0100143)","secondary_identifiers":["DOID:0081012"],"termid":"MONDO:0100143","xrefs":{"Monarch":{"xref_id":"0100143"}}}


id: PBO:0036033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_modification_during_vegetative_growth","termid":"PBO:0036033"}


id: MONDO:0006799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic neoplasm that affects the hypothalamus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic neoplasm","secondary_identifiers":["NCIT:C3129","MESH:D007029","EFO:1000979","UMLS:C0020659","DOID:3644","SCTID:254968009","icd11.foundation:1383549237","MEDGEN:5717"],"synonyms":[{"name":"hypothalamic neoplasms","type":"exact"},{"name":"hypothalamic tumor","type":"exact"},{"name":"hypothalamic tumour","type":"exact"},{"name":"hypothalamus neoplasm","type":"exact"},{"name":"hypothalamus tumor","type":"exact"},{"name":"hypothalamus tumour","type":"exact"},{"name":"neoplasm of hypothalamus","type":"exact"},{"name":"neoplasm of the hypothalamus","type":"exact"},{"name":"tumor of hypothalamus","type":"exact"},{"name":"tumor of the hypothalamus","type":"exact"},{"name":"tumour of hypothalamus","type":"exact"},{"name":"tumour of the hypothalamus","type":"exact"}],"termid":"MONDO:0006799","xrefs":{"Monarch":{"xref_id":"0006799"}}}


id: MONDO:0044999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the scalp.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete scalp disorder (obsolete MONDO:0044999)","secondary_identifiers":["SCTID:238922006"],"synonyms":[{"name":"disease of scalp","type":"exact"},{"name":"disease or disorder of scalp","type":"exact"},{"name":"disorder of scalp","type":"exact"},{"name":"scalp disease","type":"exact"},{"name":"scalp disease or disorder","type":"exact"}],"termid":"MONDO:0044999","xrefs":{"Monarch":{"xref_id":"0044999"}}}


id: FYPO:0007466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation","synonyms":[{"name":"abnormal histone H3 K9 methylation","type":"exact"},{"name":"abnormal histone H3K9me","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation","type":"exact"}],"termid":"FYPO:0007466"}


id: MONDO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Undifferentiated carcinoma of liver and intrahepatic biliary tract is an extremely rare epithelial tumor of the liver and biliary tract which presents heterogenous histological findings and not yet fully defined clinicopathological characteristics. Patients usually present with nonspecific signs and symptoms, such as abdominal pain, nausea, vomiting, anorexia, weight loss and/or jaundice. Invasive growth, high metastatic potential and a rapid clinical course are typically associated.","definition_xrefs":["Orphanet:424970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of liver and intrahepatic biliary tract","secondary_identifiers":["UMLS:C4749401","GARD:21788","MEDGEN:1656437"],"synonyms":[{"name":"undifferentiated carcinoma of liver and IBT","type":"exact"}],"termid":"MONDO:0018533","xrefs":{"Monarch":{"xref_id":"0018533"}}}


id: SO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA invalidated clone by partial processing.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_partial_processing","termid":"SO:0000416"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_processed_cDNA_clone","synonyms":[{"name":"partially processed cDNA clone","type":"exact"}],"termid":"SO:0000813"}


id: FYPO:0006302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which changes in contacts within a chromosome arm that normally take place during mitosis do not occur.","definition_xrefs":["PMID:28825727","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abolished intra-arm chromosome contact change during mitosis","synonyms":[{"name":"abolished changes in intra-arm contacts in mitosis","type":"exact"},{"name":"abolished intra-arm chromosome contact change during M phase of mitotic cell cycle","type":"related"},{"name":"abolished intra-arm chromosome contact change during mitosis during vegetative growth","type":"exact"},{"name":"intra-arm chromosome contact change abolished during mitosis","type":"exact"}],"termid":"FYPO:0006302"}


id: MONDO:0005744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor composed of primitive germ cells. It is the most common malignant germ cell tumor in the pediatric population. It occurs in the infant testis, ovary, sacrococcygeal region, vagina, uterus, prostate, abdomen, liver, retroperitoneum, thorax, and pineal/third ventricle. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). Treatment includes: surgical resection, radiation, and chemotherapy. This tumor is very responsive to chemotherapy regimens that include cisplatinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"yolk sac tumor","secondary_identifiers":["SCTID:404081005","NANDO:2200069","DOID:1911","MEDGEN:41782","UMLS:C0014145","GARD:348","ONCOTREE:BYST","Orphanet:876","MedDRA:10048251","ICDO:9071/3","NCIT:C3011","EFO:0007252"],"synonyms":[{"name":"endodermal sinus neoplasm","type":"exact"},{"name":"endodermal sinus tumor","type":"exact"},{"name":"endodermal sinus tumour","type":"exact"},{"name":"hepatoid yolk sac tumor","type":"exact"},{"name":"hepatoid yolk sac tumour","type":"exact"},{"name":"infantile embryonal carcinoma","type":"narrow"},{"name":"yolk SAC tumor, malignant","type":"exact"},{"name":"yolk Sac neoplasm","type":"exact"},{"name":"yolk Sac tumor","type":"exact"},{"name":"yolk Sac tumor site unspecified","type":"exact"},{"name":"yolk Sac tumour","type":"exact"},{"name":"yolk Sac tumour site unspecified","type":"exact"},{"name":"yolk sac tumor","type":"exact"}],"termid":"MONDO:0005744","xrefs":{"Monarch":{"xref_id":"0005744"}}}


id: PBO:0078058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 48","termid":"PBO:0078058"}


id: PBO:0040652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBSome interacting protein 1 pseudogene 1","termid":"PBO:0040652"}


id: GO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the beta-(1->4) linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan.","definition_xrefs":["EC:3.2.1.17","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"lysozyme activity","secondary_identifiers":["MetaCyc:3.2.1.17-RXN","Reactome:R-HSA-8862320"],"synonyms":[{"name":"1,4-N-acetylmuramidase activity","type":"exact"},{"name":"L-7001","type":"related"},{"name":"N,O-diacetylmuramidase activity","type":"exact"},{"name":"PR1-lysozyme","type":"related"},{"name":"globulin G","type":"related"},{"name":"globulin G1","type":"related"},{"name":"lysozyme g","type":"related"},{"name":"mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"mucopeptide glucohydrolase activity","type":"exact"},{"name":"muramidase activity","type":"exact"},{"name":"peptidoglycan N-acetylmuramoylhydrolase activity","type":"related"}],"termid":"GO:0003796"}


id: GO:0070198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to chromosome, telomeric region","synonyms":[{"name":"protein localisation to chromosome, telomeric region","type":"exact"},{"name":"protein localization to telomere","type":"exact"}],"termid":"GO:0070198"}


id: MONDO:1010984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, dog","secondary_identifiers":["OMIA:000487-9615"],"termid":"MONDO:1010984","xrefs":{"Monarch":{"xref_id":"1010984"}}}


id: PBO:0086959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Rho1p signaling, cofactor of Tus1p; required for the localization of Tus1p during all phases of cytokinesis; green fluorescent protein (GFP)-fusion protein localizes to the bud neck and cytoplasm; null mutant is viable and exhibits growth defect on a non-fermentable (respiratory) carbon source","termid":"PBO:0086959"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: MOD:00612
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by derivatization of a residue with 3,3-dithiobis[sulfosuccinimidyl propanoate], DTSSP, or with Pierce EZ-Link Sulfo-NHS-SS-Biotin reagent, sulfosuccinimidyl 3-[(2-[biotinamido]ethyl)disulfanyl]propanoate, followed by reduction with dithiothreitol and then reaction with iodoacetamide.","definition_xrefs":["Unimod:293","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(carboxamidomethylthio)propanoylated residue","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:00612"}


id: PBO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase (predicted)","termid":"PBO:0002610"}


id: PBO:0048959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein 2","termid":"PBO:0048959"}


id: PBO:0083840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved kinetochore protein; part of multiple protein complexes, including the SCF ubiquitin ligase complex, the CBF3 complex that binds centromeric DNA, and the RAVE complex that regulates assembly of the V-ATPase; protein abundance increases in response to DNA replication stress","termid":"PBO:0083840"}


id: MONDO:0019438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AL Amyloidosis is a plasma cell disorder characterized by the aggregation and deposition of insoluble amyloid fibrils derived from misfolding of monoclonal immunoglobulin light chains usually produced by a plasma cell tumor. It usually presents as primary systemic amyloidosis (PSA) with multiple organ involvement and less frequently as primary localized amyloidosis (PLA) restricted to a single organ.","definition_xrefs":["Orphanet:85443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"non-familial hypertrophic cardiomyopathy","termid":"MONDO:0016330"},{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"AL amyloidosis","secondary_identifiers":["MEDGEN:75674","GARD:5797","MESH:C531616","DOID:0080933","NANDO:1200211","UMLS:C0268381","NCIT:C158963","icd11.foundation:113043090","MedDRA:10036673","icd11.foundation:1061366491"],"synonyms":[{"name":"Light chain amyloidosis","type":"related"},{"name":"Light-chain amyloidosis","type":"exact"},{"name":"amyloidosis AL","type":"related"},{"name":"amyloidosis primary systemic","type":"related"},{"name":"primary AL amyloidosis","type":"related"},{"name":"primary amyloidosis","type":"exact"},{"name":"primary systemic AL amyloidosis","type":"related"},{"name":"primary systemic amyloidosis","type":"related"},{"name":"systemic AL amyloidsis","type":"related"}],"termid":"MONDO:0019438","xrefs":{"Monarch":{"xref_id":"0019438"}}}


id: FYPO:0005962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sodium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal sodium import","synonyms":[{"name":"abnormal cellular sodium import","type":"exact"},{"name":"abnormal sodium import across plasma membrane","type":"exact"},{"name":"abnormal sodium import during mitotic cell cycle","type":"related"},{"name":"abnormal sodium import during vegetative growth","type":"exact"},{"name":"abnormal sodium import into cell","type":"exact"},{"name":"abnormal sodium ion import","type":"exact"}],"termid":"FYPO:0005962"}


id: PBO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B","termid":"PBO:0043207"}


id: PBO:0043688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1 pseudogene 1","termid":"PBO:0043688"}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PMID:15173168","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: PBO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to function in initiation","termid":"PBO:0032760"}


id: PBO:0063228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 Y-linked","termid":"PBO:0063228"}


id: PR:Q9P324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.08/SPBC1348.09.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C977.08/C1348.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.09","synonyms":[{"name":"Spom972h-SPBC1348.09","type":"exact"}],"termid":"PR:Q9P324"}


id: PBO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mitochondrial signal sequence","termid":"PBO:0000943"}


id: PBO:0083220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene PRO3; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083220"}


id: GO:2001149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of dipeptide transport","termid":"GO:2000879"},{"relation_name":"is_a","term_name":"regulation of dipeptide transmembrane transport","termid":"GO:2001148"},{"relation_name":"negatively_regulates","term_name":"dipeptide transmembrane transport","termid":"GO:0035442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dipeptide transmembrane transport","synonyms":[{"name":"negative regulation of dipeptide membrane transport","type":"exact"}],"termid":"GO:2001149"}


id: GO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine metabolic process","termid":"GO:0051165"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process","synonyms":[{"name":"2,5-dihydroxypyridine breakdown","type":"exact"},{"name":"2,5-dihydroxypyridine catabolism","type":"exact"},{"name":"2,5-dihydroxypyridine degradation","type":"exact"},{"name":"pyridine-2,5-diol catabolic process","type":"exact"}],"termid":"GO:0051166"}


id: MONDO:0019701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital developmental disorder characterized by the presence of stippled foci of calcification in the hyaline cartilage, joint contractions, mental retardation and ichthyosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata","secondary_identifiers":["SCTID:360507004","DOID:2581","GARD:8542","ICD10CM:Q77.3","NANDO:2201017","ICD9:756.59","icd11.foundation:1923035846","NCIT:C84632","Orphanet:93442","UMLS:C0008445","MESH:D002806","MEDGEN:3052"],"synonyms":[{"name":"CDP","type":"exact"},{"name":"chondrodysplasia calcificans congenita","type":"exact"},{"name":"chondrodysplasia punctata (stippled epiphyses) Group","type":"exact"},{"name":"chondrodysplasia punctata congenita","type":"exact"}],"termid":"MONDO:0019701","xrefs":{"Monarch":{"xref_id":"0019701"}}}


id: GO:0033291
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the large and small ribosomal subunits, methionyl-initiatior tRNA, and the capped mRNA. The initiator tRNA is positioned at the ribosomal P site at the AUG codon corresponding to the beginning of the coding region.","definition_xrefs":["PMID:15145049","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation complex","termid":"GO:0070992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic 80S initiation complex","termid":"GO:0033291"}


id: GO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ghrelin to initiate a change in cell activity.","definition_xrefs":["PMID:17983853","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"growth hormone secretagogue receptor activity","synonyms":[{"name":"ghrelin receptor activity","type":"exact"}],"termid":"GO:0001616"}


id: MONDO:0011692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic, 2 (obsolete MONDO:0011692)","termid":"MONDO:0011692","xrefs":{"Monarch":{"xref_id":"0011692"}}}


id: PR:Q9USU8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ngg1 gene.","definition_xrefs":["UniProtKB:Q9USU8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-remodeling complexes subunit ngg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.10c","synonyms":[{"name":"Spom972h-ngg1","type":"exact"},{"name":"kinesin-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU8"}


id: GO:0007471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which the anatomical structures of the first or anterior segment of the insect thorax are generated and organized.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete prothoracic morphogenesis (obsolete GO:0007471)","synonyms":[{"name":"prothoracic morphogenesis","type":"exact"}],"termid":"GO:0007471"}


id: PBO:0056719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 1","termid":"PBO:0056719"}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034835)","termid":"GO:0034835"}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: PBO:0052117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNC4 divergent transcript","termid":"PBO:0052117"}


id: MONDO:0958128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-transplant-related bronchiolitis obliterans","secondary_identifiers":["UMLS:C5925142","Orphanet:658612","MEDGEN:1863569"],"termid":"MONDO:0958128","xrefs":{"Monarch":{"xref_id":"0958128"}}}


id: MONDO:0008413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete schizophrenia (obsolete MONDO:0008413)","termid":"MONDO:0008413","xrefs":{"Monarch":{"xref_id":"0008413"}}}


id: GO:0090296
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090296","terms_by_termid":{"GO:0090297":null}}


id: PBO:0072636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 2","termid":"PBO:0072636"}


id: PBO:0029599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029599"}


id: GO:0030125
data:
  {"annotated_genes":["SJAG_04609","SJAG_04565","SJAG_01167","SJAG_01809","SJAG_02805","SJAG_04644","SJAG_00800","SJAG_02177","SJAG_00379","SJAG_00104","SJAG_04517","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75588,81561],"is_not":false,"summary":null,"term":"GO:0030125"},{"annotations":[62747,112584,112372,79402],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[76221,80046,107893,58571],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58983,66588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"A clathrin coat found on a vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"vesicle coat","termid":"GO:0030120"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin vesicle coat","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030125","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null}}


id: PBO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 9, pseudogene","termid":"PBO:0044796"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: PBO:0038777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 1B","termid":"PBO:0038777"}


id: PR:Q9Y7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC9B6.03 gene.","definition_xrefs":["UniProtKB:Q9Y7M3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE-type zinc finger-containing protein C9B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.03","synonyms":[{"name":"Spom972h-SPBC9B6.03","type":"exact"}],"termid":"PR:Q9Y7M3"}


id: PBO:0078817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 1-1","termid":"PBO:0078817"}


id: PBO:0047427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc epsilon receptor Ig","termid":"PBO:0047427"}


id: FYPO:0005746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased when the cell is subject to glucose starvation. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein export from nucleus during glucose starvation","synonyms":[{"name":"decreased protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein export from nucleus during glucose depletion","type":"exact"},{"name":"decreased protein export from nucleus during glucose deprivation","type":"exact"},{"name":"decreased protein export from nucleus during glucose limitation","type":"related"},{"name":"reduced protein export from nucleus during glucose starvation","type":"exact"}],"termid":"FYPO:0005746"}


id: GO:0008309
data:
  {"annotated_genes":["SJAG_02298","SJAG_01648","SJAG_05373","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88007,74953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[107312,96631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004527","GO:0016787","GO:0003674","GO:0140097","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"double-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"double-stranded DNA specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008309","terms_by_termid":{"GO:0008311":null,"GO:0051908":null}}


id: MONDO:0100512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome, hepatocerebral form","secondary_identifiers":["Orphanet:254871","UMLS:C3711385","GARD:20769","MESH:C580039","MEDGEN:777993","icd11.foundation:1285620325"],"synonyms":[{"name":"deoxyguanosine kinase deficiency","type":"exact"},{"name":"mtDNA depletion syndrome, hepatocerebral form","type":"exact"}],"termid":"MONDO:0100512","xrefs":{"Monarch":{"xref_id":"0100512"}}}


id: PBO:0068977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 221, pseudogene","termid":"PBO:0068977"}


id: GO:0005515
data:
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binding","type":"exact"}],"termid":"GO:0005515","terms_by_termid":{"GO:0000149":null,"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001096":null,"GO:0001097":null,"GO:0001156":null,"GO:0001179":null,"GO:0001664":null,"GO:0001965":null,"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0005102":null,"GO:0005515":null,"GO:0005516":null,"GO:0005519":null,"GO:0008017":null,"GO:0008179":null,"GO:0017025":null,"GO:0019902":null,"GO:0019903":null,"GO:0019905":null,"GO:0030276":null,"GO:0030332":null,"GO:0030544":null,"GO:0031072":null,"GO:0031267":null,"GO:0031369":null,"GO:0031593":null,"GO:0031624":null,"GO:0031625":null,"GO:0032036":null,"GO:0032050":null,"GO:0032051":null,"GO:0032182":null,"GO:0034236":null,"GO:0035226":null,"GO:0036435":null,"GO:0042393":null,"GO:0043130":null,"GO:0043175":null,"GO:0043424":null,"GO:0043548":null,"GO:0044389":null,"GO:0045503":null,"GO:0045504":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null,"GO:0051015":null,"GO:0051020":null,"GO:0051082":null,"GO:0051087":null,"GO:0051117":null,"GO:0051787":null,"GO:0051879":null,"GO:0070063":null,"GO:0071074":null,"GO:0071889":null,"GO:0097602":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0030388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology","termid":"PBO:0030388"}


id: MONDO:0024313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by Staphylococcus.","definition_xrefs":["NCIT:C35038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal infection","secondary_identifiers":["MEDGEN:52483","MESH:D013203","SCTID:56038003","UMLS:C0038160","EFO:1001849"],"synonyms":[{"name":"staphylococcal infection","type":"exact"}],"termid":"MONDO:0024313","xrefs":{"Monarch":{"xref_id":"0024313"}}}


id: PBO:0059518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2","termid":"PBO:0059518"}


id: SO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL7 RNA leader sequence to the 5' end of an mRNA. SL7 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL7_acceptor_site","synonyms":[{"name":"SL37 acceptor site","type":"exact"}],"termid":"SO:0001752"}


id: MONDO:1012180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, Eurasian elk","secondary_identifiers":["OMIA:000690-9852"],"termid":"MONDO:1012180","xrefs":{"Monarch":{"xref_id":"1012180"}}}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: PBO:0073443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor proline and glutamine rich pseudogene 1","termid":"PBO:0073443"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: GO:0022027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"interkinetic nuclear migration","termid":"GO:0022027"}


id: FYPO:0005693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or more microtubule organizing centers (MTOCs) is does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"abolished cytoplasmic microtubule nucleation during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubule nucleation abolished","type":"exact"}],"termid":"FYPO:0005693"}


id: GO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature development in camera-type eye","synonyms":[{"name":"retinal vasculature development","type":"exact"}],"termid":"GO:0061298"}


id: GO:1904614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biphenyl stimulus.","definition_xrefs":["PMID:23196670","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biphenyl","termid":"GO:1904614"}


id: MONDO:0016620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically and clinically heterogeneous inherited disorder characterized by digital clubbing and osteoarthropathy, with variable features of pachydermia, delayed closure of the fontanels, and congenital heart disease. There are two types of PHO: pachydermoperiostosis and cranio-osteoarthropathy.","definition_xrefs":["Orphanet:248095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypertrophic osteoarthropathy","secondary_identifiers":["icd11.foundation:792225761","MEDGEN:18210","MedDRA:10051686","NANDO:2201004","NCIT:C85023","DOID:14283","SCTID:88220006","Orphanet:2796","MESH:D010004","GARD:20667","OMIMPS:259100","UMLS:C0029411","NANDO:1200642","NANDO:2100288"],"synonyms":[{"name":"PDP","type":"exact"},{"name":"PHO","type":"exact"},{"name":"PHOAR1","type":"related"},{"name":"Touraine Solente Gole syndrome","type":"exact"},{"name":"Touraine-Solente-Gole syndrome","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, type 1","type":"exact"},{"name":"hypertropic osteoarthropathy, primary","type":"exact"},{"name":"idiopathic hypertrophic osteoarthropathy","type":"exact"},{"name":"pachydermoperiostosis","type":"exact"},{"name":"pachydermoperiostosis of nail","type":"exact"},{"name":"pachydermoperiostosis of nail [ambiguous]","type":"exact"},{"name":"pachydermoperiostosis syndrome","type":"exact"}],"termid":"MONDO:0016620","xrefs":{"Monarch":{"xref_id":"0016620"}}}


id: MONDO:0015310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","secondary_identifiers":["Orphanet:137905"],"termid":"MONDO:0015310","xrefs":{"Monarch":{"xref_id":"0015310"}}}


id: PBO:0086748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to be a glycosylphosphatidylinositol-modified (GPI) protein; YHR214W has a paralog, YAR066W, that arose from a segmental duplication","termid":"PBO:0086748"}


id: MONDO:0004049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurotic reactions to unusual, severe, or overwhelming military stress.","definition_xrefs":["MESH:D003130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute stress disorder","termid":"MONDO:0003763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combat disorder","secondary_identifiers":["MEDGEN:40403","DOID:6950","UMLS:C0009426","SCTID:279611005"],"synonyms":[{"name":"Shocks, shell","type":"related"},{"name":"combat disorder","type":"exact"},{"name":"combat neuroses","type":"related"},{"name":"combat neurosis","type":"exact"},{"name":"combat stress disorder","type":"related"},{"name":"combat stress disorders","type":"related"},{"name":"disorder, combat","type":"related"},{"name":"disorder, combat stress","type":"related"},{"name":"disorders, combat","type":"related"},{"name":"disorders, combat stress","type":"related"},{"name":"neuroses, combat","type":"related"},{"name":"neuroses, war","type":"related"},{"name":"neurosis, combat","type":"related"},{"name":"neurosis, war","type":"related"},{"name":"shell Shocks","type":"related"},{"name":"shell shock","type":"related"},{"name":"shock, shell","type":"related"},{"name":"stress disorder, combat","type":"related"},{"name":"stress disorders, combat","type":"related"},{"name":"war neuroses","type":"related"},{"name":"war neurosis","type":"related"}],"termid":"MONDO:0004049","xrefs":{"Monarch":{"xref_id":"0004049"}}}


id: PBO:0109966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial steroid dehydrogenase","termid":"PBO:0109966"}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: FYECO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ammonium sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ (NH4)2SO4","synonyms":[{"name":"+ ammonium sulfate","type":"exact"}],"termid":"FYECO:0000343"}


id: PBO:0113435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during the induction of sporulation; homologous to human ZCH13H3, a subunit of the mammalian m6A methyltransferase complex","termid":"PBO:0113435"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["UMLS:C3553622","MEDGEN:766536","OMIM:614743"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: GO:0070407
data:
  {"annotated_genes":["SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68479],"is_not":false,"summary":null,"term":"GO:0070407"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the oxidation of one or more amino acid residues in the protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein catabolic process","termid":"GO:0019941"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"oxidation-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"oxidation-dependent protein breakdown","type":"exact"},{"name":"oxidation-dependent protein catabolism","type":"exact"},{"name":"oxidation-dependent protein degradation","type":"exact"},{"name":"oxidation-dependent proteolysis","type":"exact"},{"name":"oxidized protein catabolic process","type":"exact"}],"termid":"GO:0070407","terms_by_termid":{"GO:0070407":null}}


id: MONDO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the placenta.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"placenta cancer","secondary_identifiers":["ICD9:239.5","MEDGEN:56310","DOID:2021","SCTID:126920004","UMLS:C0153572","ICD9:181","NCIT:C3555"],"synonyms":[{"name":"cancer of placenta","type":"exact"},{"name":"deciduoma, malignant","type":"exact"},{"name":"malignant neoplasm of placenta","type":"exact"},{"name":"malignant neoplasm of the placenta","type":"exact"},{"name":"malignant placenta neoplasm","type":"exact"},{"name":"malignant placenta tumor","type":"exact"},{"name":"malignant placenta tumour","type":"exact"},{"name":"malignant placental neoplasm","type":"exact"},{"name":"malignant placental tumor","type":"exact"},{"name":"malignant placental tumour","type":"exact"},{"name":"malignant tumor of placenta","type":"exact"},{"name":"malignant tumor of the placenta","type":"exact"},{"name":"malignant tumour of placenta","type":"exact"},{"name":"malignant tumour of the placenta","type":"exact"},{"name":"placenta cancer","type":"exact"},{"name":"placental cancer","type":"exact"},{"name":"placental tumors","type":"broad"},{"name":"placental tumours","type":"broad"},{"name":"primary malignant neoplasm of placenta","type":"exact"}],"termid":"MONDO:0002178","xrefs":{"Monarch":{"xref_id":"0002178"}}}


id: PBO:0084348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor","termid":"PBO:0084348"}


id: GO:0014878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to electrical stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to electrical stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014878"}


id: PBO:0046705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 4","termid":"PBO:0046705"}


id: FYPO:0007743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly begins during interphase of the mitotic cell cycle. Septum assembly normally begins during M phase.","definition_xrefs":["PMID:20226666","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"premature septum assembly during mitotic interphase","synonyms":[{"name":"advanced septum assembly during mitotic interphase","type":"exact"},{"name":"premature division septum assembly during mitotic interphase","type":"exact"},{"name":"premature septation","type":"broad"},{"name":"premature septum assembly during interphase during vegetative growth","type":"exact"},{"name":"premature septum assembly during interphase of mitotic cell cycle","type":"exact"},{"name":"premature septum formation during mitotic interphase","type":"related"}],"termid":"FYPO:0007743"}


id: MONDO:0850417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tuberculosis that is characterized by cerebral edema sometimes with features similar to acute disseminated encephalomyelitis (ADEM) and may manifest with a variety of symptoms ranging from focal neurological deficits to convulsions and decreased conscious state.","definition_xrefs":["DOID:0080995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous encephalopathy","termid":"MONDO:0850417","xrefs":{"Monarch":{"xref_id":"0850417"}}}


id: PBO:0027975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine-type_peptidase_activity","termid":"PBO:0027975"}


id: GO:0102165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-hex-3-en-1-ol = (3Z)-hex-3-en-1-yl acetate + coenzyme A.","definition_xrefs":["RHEA:28254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"(Z)-3-hexen-1-ol acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11852","EC:2.3.1.195"],"termid":"GO:0102165"}


id: PBO:0070751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 7","termid":"PBO:0070751"}


id: PR:O43001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.02","synonyms":[{"name":"Spom972h-syj1","type":"exact"},{"name":"synaptojanin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43001"}


id: GO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).","definition_xrefs":["GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"postsynaptic membrane organization","synonyms":[{"name":"post-synaptic membrane organization","type":"exact"},{"name":"postsynaptic membrane organisation","type":"exact"}],"termid":"GO:0001941"}


id: PBO:0030588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_aspartate_level","termid":"PBO:0030588"}


id: PBO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha5","termid":"PBO:0048201"}


id: MONDO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy (obsolete MONDO:0000864)","termid":"MONDO:0000864","xrefs":{"Monarch":{"xref_id":"0000864"}}}


id: PBO:0083211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF SEC59/YML013C","termid":"PBO:0083211"}


id: GO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane of a vacuole that retains the same shape regardless of cell cycle phase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole lumen","synonyms":[{"name":"lumen of vacuole with cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000330"}


id: PBO:0050722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 8","termid":"PBO:0050722"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: GO:1903201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced cell death (obsolete GO:1903201)","synonyms":[{"name":"regulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903201"}


id: PBO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XII","termid":"PBO:0046812"}


id: PBO:0077235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1 pseudogene 1","termid":"PBO:0077235"}


id: PBO:0090718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt3","termid":"PBO:0090718"}


id: GO:0019278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine catabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine breakdown","type":"exact"},{"name":"UDP-N-acetylgalactosamine catabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine degradation","type":"exact"}],"termid":"GO:0019278"}


id: MOD:00978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piperidine adduct to C-terminal Cys","termid":"MOD:00978"}


id: MONDO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lesion on the surface of the skin or a mucous surface, produced by the sloughing of inflammatory necrotic tissue.","definition_xrefs":["MESH:D014456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcer disease","secondary_identifiers":["SCTID:429040005","UMLS:C0041582","NCIT:C3426","MEDGEN:22541"],"synonyms":[{"name":"ulcer","type":"exact"},{"name":"ulcers","type":"exact"}],"termid":"MONDO:0043839","xrefs":{"Monarch":{"xref_id":"0043839"}}}


id: MONDO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung cancer (obsolete MONDO:0001669)","termid":"MONDO:0001669","xrefs":{"Monarch":{"xref_id":"0001669"}}}


id: MONDO:0013721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 4a deficiency","secondary_identifiers":["UMLS:C3280642","MESH:C565167","OMIM:614380","DOID:0060297","GARD:15798","MEDGEN:482272"],"synonyms":[{"name":"C4A classic complement early component deficiency","type":"exact"},{"name":"C4A deficiency","type":"related"},{"name":"C4AD","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C4A","type":"exact"},{"name":"complement component 4A deficiency","type":"related"},{"name":"complement component 4a deficiency","type":"exact"}],"termid":"MONDO:0013721","xrefs":{"Monarch":{"xref_id":"0013721"}}}


id: GO:0110151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of biomineralization (obsolete GO:0110151)","synonyms":[{"name":"positive regulation of biomineral formation","type":"narrow"},{"name":"positive regulation of biomineralisation","type":"exact"},{"name":"positive regulation of mineralisation","type":"exact"},{"name":"positive regulation of mineralization","type":"exact"}],"termid":"GO:0110151"}


id: GO:0070832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with three consecutive N-methylation steps that are carried out on phospho-bases, phosphoethanolamine, phospho-N-methylethanolamine, and phospho-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-choline","termid":"GO:0070832"}


id: GO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzing the reaction: acyl-[acyl-carrier-protein] + S-adenosyl-L-methionine -> [acyl-carrier- protein] + S-methyl-5'-thioadenosine + N-acyl-L-homoserine lactone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acyl homoserine lactone synthase activity","secondary_identifiers":["EC:2.3.1.184","RHEA:10096"],"synonyms":[{"name":"autoinducer-1 synthase","type":"related"}],"termid":"GO:0061579"}


id: MONDO:0013975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the KRT74 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 7, hair/nail type","secondary_identifiers":["DOID:0111660","MEDGEN:767031","OMIM:614929","GARD:18065","UMLS:C3554117"],"synonyms":[{"name":"ECTD7","type":"related"},{"name":"KRT74 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 7, hair/nail type","type":"exact"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in KRT74","type":"exact"}],"termid":"MONDO:0013975","xrefs":{"Monarch":{"xref_id":"0013975"}}}


id: PBO:0028695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_termination","termid":"PBO:0028695"}


id: PBO:0058803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7845","termid":"PBO:0058803"}


id: PBO:0031108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage","termid":"PBO:0031108"}


id: GO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.","definition_xrefs":["MetaCyc:GOLPDLCAT-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glycerol catabolic process","termid":"GO:0019588"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process to propane-1,3-diol","synonyms":[{"name":"glycerol fermentation to 1,3-propanediol","type":"exact"},{"name":"glycerol fermentation to propane-1,3-diol","type":"exact"}],"termid":"GO:0019589"}


id: PBO:0059068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin associated oligodendrocyte basic protein","termid":"PBO:0059068"}


id: GO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin catabolic process","synonyms":[{"name":"saponin breakdown","type":"exact"},{"name":"saponin catabolism","type":"exact"},{"name":"saponin degradation","type":"exact"}],"termid":"GO:0016136"}


id: PBO:0059586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial amidoxime reducing component 1","termid":"PBO:0059586"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: MONDO:1010079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prekallikrein deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prekallikrein deficiency, non-human animal","secondary_identifiers":["OMIA:000819"],"termid":"MONDO:1010079","xrefs":{"Monarch":{"xref_id":"1010079"}}}


id: PBO:0055794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 3","termid":"PBO:0055794"}


id: PR:Q10281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein subunit beta-2-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19868:SF0","OMA:SCHPO01018","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit beta-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.15","secondary_identifiers":["UniProtKB:Q10281"],"synonyms":[{"name":"Spom972h-GNB2L1","type":"exact"},{"name":"receptor of activated protein kinase C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10281"}


id: GO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(1Z-alkenyl)-sn-glycero-3-phosphocholine + an acyl-CoA = 1-O-(1Z-alkenyl)-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["RHEA:10344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"plasmalogen synthase activity","secondary_identifiers":["MetaCyc:PLASMALOGEN-SYNTHASE-RXN","EC:2.3.1.25"],"synonyms":[{"name":"1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047159"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: GO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont stops, prevents or reduces its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"negatively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of development of symbiont in host","termid":"GO:0044131"}


id: PBO:0091681
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicroTubule Organizer","termid":"PBO:0091681"}


id: GO:0018592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrocatechol + NAD(P)H + O2 = 2-hydroxy-1,4-benzoquinone + nitrite + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrocatechol 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0231"],"termid":"GO:0018592"}


id: PBO:0055952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 61","termid":"PBO:0055952"}


id: MONDO:0013732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid therapy, response to","secondary_identifiers":["MEDGEN:482319","OMIM:614400","UMLS:C3280689"],"synonyms":[{"name":"GCTR","type":"related"},{"name":"glucocorticoid therapy, response to","type":"exact"}],"termid":"MONDO:0013732","xrefs":{"Monarch":{"xref_id":"0013732"}}}


id: GO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte homeostasis","synonyms":[{"name":"immune cell homeostasis","type":"exact"},{"name":"leucocyte homeostasis","type":"exact"}],"termid":"GO:0001776"}


id: MONDO:0030893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, progressive, infantile-onset, with or without deafness","secondary_identifiers":["MEDGEN:1779519","UMLS:C5542996","OMIM:619147"],"synonyms":[{"name":"LEPID","type":"exact"}],"termid":"MONDO:0030893","xrefs":{"Monarch":{"xref_id":"0030893"}}}


id: PBO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2C","termid":"PBO:0050786"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: PBO:0058026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3976","termid":"PBO:0058026"}


id: PBO:0051788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCF5 antisense RNA 1","termid":"PBO:0051788"}


id: MONDO:0003090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the extrahepatic bile duct.","direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct carcinoma","secondary_identifiers":["SCTID:372101000","MEDGEN:116036","UMLS:C0238019","DOID:4682","NCIT:C3860"],"synonyms":[{"name":"carcinoma of extrahepatic bile duct","type":"exact"},{"name":"carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cancer","type":"exact"},{"name":"extrahepatic bile duct carcinoma","type":"exact"}],"termid":"MONDO:0003090","xrefs":{"Monarch":{"xref_id":"0003090"}}}


id: GO:2000362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of prostaglandin-E synthase activity (obsolete GO:2000362)","synonyms":[{"name":"negative regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"negative regulation of PGE isomerase activity","type":"exact"},{"name":"negative regulation of PGE2 isomerase activity","type":"exact"},{"name":"negative regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"negative regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"negative regulation of endoperoxide isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"negative regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000362"}


id: PBO:0089050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase","termid":"PBO:0089050"}


id: GO:0015546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sulfathiazole from one side of a membrane to the other. Sulfathiazole is an antibacterial agent of the sulfonamide group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfathiazole transmembrane transporter activity","synonyms":[{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"related"},{"name":"sulphathiazole transporter activity","type":"exact"}],"termid":"GO:0015546"}


id: PR:000050482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the sid2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC24B11.11c","synonyms":[{"name":"SPAC24B11.11c","type":"related"},{"name":"Spom-sid2","type":"exact"},{"name":"sid2","type":"related"}],"termid":"PR:000050482"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: PBO:0059799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 25","termid":"PBO:0059799"}


id: PBO:0113549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1p co-chaperone; recognizes eEF1A in GTP-bound, pre-hydrolysis conformation, dampens folding complex GTPase activity to drive client release from Zpr1p","termid":"PBO:0113549"}


id: MOD:00103
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-phenylalanine amide.","definition_xrefs":["PubMed:8868490","RESID:AA0094","PubMed:2905621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine amide","synonyms":[{"name":"(2S)-2-amino-3-phenylpropanamide","type":"exact"},{"name":"L-phenylalanine amide","type":"exact"},{"name":"MOD_RES Phenylalanine amide","type":"exact"},{"name":"PheN","type":"exact"},{"name":"amidated L-phenylalanine","type":"exact"},{"name":"phenylalaninamide","type":"exact"}],"termid":"MOD:00103"}


id: PBO:0049511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 18","termid":"PBO:0049511"}


id: GO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["PMID:26512644","GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"}


id: PBO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal binding protein 1","termid":"PBO:0044131"}


id: PBO:0083913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forkhead family transcription factor; rate-limiting replication origin activator; evolutionarily conserved lifespan regulator; binds multiple chromosomal elements with distinct specificities, cell cycle dynamics; regulates transcription elongation, chromatin silencing at mating loci, expression of G2/M phase genes; facilitates clustering, activation of early-firing replication origins; binds HML recombination enhancer, regulates donor preference during mating-type switching","termid":"PBO:0083913"}


id: PBO:0083787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA and snoRNA maturation; competes with TLC1 RNA for binding to Est2p, suggesting a role in negative regulation of telomerase; human homolog inhibits telomerase; contains a G-patch RNA interacting domain","termid":"PBO:0083787"}


id: PBO:0109916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Gls1","termid":"PBO:0109916"}


id: GO:0070591
data:
  {"annotated_genes":["SJAG_04868","SJAG_04236","SJAG_03013","SJAG_04184","SJAG_01321","SJAG_03587","SJAG_04483","SJAG_03483","SJAG_03057","SJAG_04238","SJAG_00974"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103700,108639,113678,117391,117399],"is_not":false,"summary":null,"term":"GO:0070591"},{"annotations":[93945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88159,87665,91247,89711],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of an ascospore wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"},{"relation_name":"is_a","term_name":"spore wall biogenesis","termid":"GO:0070590"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0071554","GO:0008150","GO:0030437"],"is_obsolete":false,"name":"ascospore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070591","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: MONDO:0800422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cirrhosis, noncryptogenic, susceptibility to","secondary_identifiers":["UMLS:C1835713","MEDGEN:324345"],"termid":"MONDO:0800422","xrefs":{"Monarch":{"xref_id":"0800422"}}}


id: PBO:0004406
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.61","termid":"PBO:0004406"}


id: GO:0045337
data:
  {"annotated_genes":["SJAG_00580","SJAG_04568","SJAG_04865","SJAG_01474","SJAG_03349","SJAG_03352","SJAG_03715","SJAG_00413","SJAG_04499","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76066,101405,109053,93925,99106,88153,114505,81904,106080,113340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5123"],"synonyms":[{"name":"farnesyl diphosphate anabolism","type":"exact"},{"name":"farnesyl diphosphate biosynthesis","type":"exact"},{"name":"farnesyl diphosphate formation","type":"exact"},{"name":"farnesyl diphosphate synthesis","type":"exact"}],"termid":"GO:0045337","terms_by_termid":{"GO:0010142":null}}


id: GO:0030159
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77069],"is_not":false,"summary":null,"term":"GO:0030159"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support for the assembly of a multiprotein receptor signaling complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"signaling receptor complex adaptor activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"receptor signaling complex adaptor activity","type":"exact"},{"name":"receptor signaling complex scaffold activity","type":"exact"},{"name":"receptor signaling complex scaffold protein activity","type":"exact"},{"name":"receptor signalling complex adaptor activity","type":"exact"},{"name":"receptor signalling complex scaffold activity","type":"exact"}],"termid":"GO:0030159","terms_by_termid":{"GO:0030159":null}}


id: GO:0004842
data:
  {"annotated_genes":["SJAG_01900","SJAG_01854","SJAG_00435","SJAG_00111","SJAG_01637","SJAG_03191","SJAG_01593","SJAG_04783","SJAG_01992","SJAG_03883","SJAG_00300","SJAG_05012","SJAG_04151","SJAG_04619","SJAG_01360","SJAG_00341","SJAG_00293","SJAG_00855","SJAG_03613","SJAG_05022","SJAG_02918","SJAG_03175","SJAG_02668","SJAG_03112","SJAG_01533","SJAG_01772","SJAG_02299","SJAG_00561","SJAG_03657","SJAG_02371","SJAG_01679","SJAG_05274","SJAG_00188","SJAG_02746","SJAG_01535","SJAG_02521","SJAG_04429","SJAG_03618","SJAG_00209","SJAG_05236","SJAG_03324","SJAG_04612","SJAG_04573","SJAG_03615","SJAG_04309","SJAG_03387","SJAG_00552","SJAG_01253","SJAG_02347","SJAG_00475","SJAG_03005","SJAG_00500","SJAG_03970","SJAG_02308","SJAG_04600","SJAG_03968","SJAG_02319","SJAG_01507","SJAG_03860","SJAG_03831","SJAG_02685","SJAG_04857","SJAG_03302","SJAG_03006","SJAG_00931","SJAG_04915","SJAG_01165","SJAG_02851","SJAG_05340","SJAG_05323","SJAG_02169","SJAG_02575","SJAG_00208","SJAG_00819","SJAG_05264","SJAG_04990","SJAG_04966","SJAG_00173","SJAG_01212","SJAG_00509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72881],"is_not":false,"summary":null,"term":"GO:0004842"},{"annotations":[118476,115814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[93831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[87624,79787,87247,76119,79303,73072,101790,87464,113872,66387,75180,116392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[100834,116307,66930,102937,77398,76048,73251,102555,64187,81304,57065,93044,112987,116308,63136,79980,89669,80486,96290,102952,103894,74509,88092,91015,116813,90195,74722,87465,112409,77107,109541,73693,70918,66877,65597,77139,111672,76147,113927,78396,80560,80942,87766,71032,75329,104787,98043,87475,109211,106506,73596,79241,74923,81780,79206,76051,88447,118066,58583,89187,61845,98904,107566,78093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[76558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.","definition_xrefs":["GOC:jh2","PMID:9635407","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase 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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-5668534","Reactome:R-HSA-183084","GO:0004841","Reactome:R-HSA-5607756","Reactome:R-HSA-8948709","Reactome:R-HSA-180540","Reactome:R-HSA-1169402","Reactome:R-HSA-3000335","Reactome:R-HSA-5675470","Reactome:R-HSA-2179276","Reactome:R-HSA-5667111","Reactome:R-HSA-9796346","Reactome:R-HSA-9861563","Reactome:R-HSA-1358790","Reactome:R-HSA-5362412","Reactome:R-HSA-8956106","Reactome:R-HSA-9833155","Reactome:R-HSA-1912357","Reactome:R-HSA-182993","Reactome:R-HSA-4332236","Reactome:R-HSA-9834070","Reactome:R-HSA-5610742","Reactome:R-HSA-183051","Reactome:R-HSA-9750946","Reactome:R-HSA-1358789","Reactome:R-HSA-173542","Reactome:R-HSA-174195","Reactome:R-HSA-9793679","Reactome:R-HSA-1980074","Reactome:R-HSA-9793485","Reactome:R-HSA-9014342","Reactome:R-HSA-3788724","Reactome:R-HSA-9796626","Reactome:R-HSA-1363331","Reactome:R-HSA-936942","Reactome:R-HSA-3781009","GO:0004840","Reactome:R-HSA-1169398","Reactome:R-HSA-983156","Reactome:R-HSA-179417","KEGG_REACTION:R03876","Reactome:R-HSA-9701000","Reactome:R-HSA-9833973","Reactome:R-HSA-180597","Reactome:R-HSA-174057","Reactome:R-HSA-9645414","Reactome:R-HSA-975118","Reactome:R-HSA-202534","Reactome:R-HSA-5655170","Reactome:R-HSA-1912386","Reactome:R-HSA-1918095","Reactome:R-HSA-2186747","Reactome:R-HSA-3249386","Reactome:R-HSA-173545","Reactome:R-HSA-1169397","Reactome:R-HSA-201425","Reactome:R-HSA-983140","Reactome:R-HSA-1918092","Reactome:R-HSA-3797226","Reactome:R-HSA-446877","Reactome:R-HSA-5610746","Reactome:R-HSA-3134946","Reactome:R-HSA-450358","Reactome:R-HSA-9793444","Reactome:R-HSA-2169050","Reactome:R-HSA-975147","Reactome:R-HSA-182986","Reactome:R-HSA-202453","Reactome:R-HSA-205118","Reactome:R-HSA-5607728","Reactome:R-HSA-5610745","Reactome:R-HSA-936412","Reactome:R-HSA-2737728","Reactome:R-HSA-2900765","Reactome:R-HSA-870449","Reactome:R-HSA-174159","Reactome:R-HSA-2730904","Reactome:R-HSA-5693108","Reactome:R-HSA-9688831","Reactome:R-HSA-1253282","Reactome:R-HSA-5357757","Reactome:R-HSA-9815507","Reactome:R-HSA-1169406","Reactome:R-HSA-1852623","Reactome:R-HSA-1169394","Reactome:R-HSA-5652009","Reactome:R-HSA-5660753","Reactome:R-HSA-936986","Reactome:R-HSA-1358792","Reactome:R-HSA-2187368","Reactome:R-HSA-3134804","Reactome:R-HSA-9758604","Reactome:R-HSA-264444","Reactome:R-HSA-451418","Reactome:R-HSA-187575","Reactome:R-HSA-1234163","Reactome:R-HSA-5668454","Reactome:R-HSA-75824","Reactome:R-HSA-174104","Reactome:R-HSA-1169395","Reactome:R-HSA-918224","Reactome:R-HSA-3780995","Reactome:R-HSA-9796387","Reactome:R-HSA-741386","Reactome:R-HSA-68712","Reactome:R-HSA-9013974","Reactome:R-HSA-2213017","Reactome:R-HSA-983153","Reactome:R-HSA-1234172","Reactome:R-HSA-9628444","Reactome:R-HSA-5607725","Reactome:R-HSA-211734","Reactome:R-HSA-209063","Reactome:R-HSA-2682349","Reactome:R-HSA-69598","Reactome:R-HSA-9013069","Reactome:R-HSA-5684250","Reactome:R-HSA-9861640","Reactome:R-HSA-9645394","Reactome:R-HSA-1980118","Reactome:R-HSA-9817362","Reactome:R-HSA-1169405","Reactome:R-HSA-5607757","Reactome:R-HSA-2186785","Reactome:R-HSA-174227","Reactome:R-HSA-5691108","Reactome:R-HSA-5483238","Reactome:R-HSA-174144","Reactome:R-HSA-1977296","Reactome:R-HSA-2769007","Reactome:R-HSA-183089","Reactome:R-HSA-400267","Reactome:R-HSA-168915","Reactome:R-HSA-2172172","Reactome:R-HSA-5667107"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"broad"},{"name":"ubiquitin conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin ligase activity","type":"narrow"},{"name":"ubiquitin protein ligase activity","type":"narrow"},{"name":"ubiquitin protein-ligase activity","type":"narrow"},{"name":"ubiquitin-conjugating enzyme activity","type":"narrow"}],"termid":"GO:0004842","terms_by_termid":{"GO:0004842":null,"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0040185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASPSCR1 tether for SLC2A4, UBX domain containing","termid":"PBO:0040185"}


id: PBO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 7","termid":"PBO:0060298"}


id: MONDO:0011352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine carcinoma of salivary glands, sensorineural hearing loss, and enamel hypoplasia","secondary_identifiers":["OMIM:603641","UMLS:C1863649","MESH:C566352","MEDGEN:355029"],"synonyms":[{"name":"neuroendocrine carcinoma of salivary glands, sensorineural hearing loss, and enamel hypoplasia","type":"exact"}],"termid":"MONDO:0011352","xrefs":{"Monarch":{"xref_id":"0011352"}}}


id: PBO:0075166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D2 polypeptide","termid":"PBO:0075166"}


id: PBO:0003462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein (predicted)","termid":"PBO:0003462"}


id: MONDO:0019445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichofolliculoma is a rare benign follicular hamartoma that develops primarily on the face of adults, with a particular predilection for the back of the nose, but also on the neck or scalp. It presents as a solitary hemispheric flesh-colored nodule with a central pore or black dot that may contain a tuft of hair.","definition_xrefs":["Orphanet:864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma of skin appendage","termid":"MONDO:0021539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichofolliculoma","secondary_identifiers":["UMLS:C0334262","GARD:5263","MEDGEN:87202","MedDRA:10044611","MESH:C536553","NCIT:C4112","SCTID:274899008","ICDO:8101/0"],"termid":"MONDO:0019445","xrefs":{"Monarch":{"xref_id":"0019445"}}}


id: GO:1901312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901312)","synonyms":[{"name":"down regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down regulation of extracellular matrix protein production","type":"related"},{"name":"down regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"down-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down-regulation of extracellular matrix protein production","type":"related"},{"name":"down-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"downregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"downregulation of extracellular matrix protein production","type":"related"},{"name":"downregulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"inhibition of expression of extracellular matrix proteins","type":"exact"},{"name":"inhibition of extracellular matrix protein production","type":"related"},{"name":"inhibition of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"negative regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"negative regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901312"}


id: FYPO:0007926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of calcofluor and potassium chloride. Cells stop growing (and may die) at concentrations of calcofluor and potassium chloride that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to calcofluor and potassium chloride","synonyms":[{"name":"sensitive to calcofluor and potassium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0007926"}


id: PBO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8","termid":"PBO:0044600"}


id: PBO:0053610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 644","termid":"PBO:0053610"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: PR:Q9Y709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- skp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of kinetochore protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.05","synonyms":[{"name":"P19/Skp1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-skp1","type":"exact"}],"termid":"PR:Q9Y709"}


id: PBO:0031654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031654"}


id: GO:0047277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["EC:2.4.1.88","MetaCyc:2.4.1.88-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"globoside alpha-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:22164"],"synonyms":[{"name":"Forssman synthase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:N-acetyl-D-galactosaminyl-1,3-D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide alpha-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"globoside acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-globoside alpha-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047277"}


id: PBO:0069804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1090, pseudogene","termid":"PBO:0069804"}


id: PBO:0085502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein co-chaperone with a zinc finger motif; essential for protein import into mitochondria; may act with Pam18p to facilitate recognition and folding of imported proteins by Ssc1p (mtHSP70) in the mitochondrial matrix; required for the maintenance of Ssc1p solubility and assists in the functional interaction of Ssc1p with substrate proteins","termid":"PBO:0085502"}


id: GO:0035655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-18 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-18","termid":"GO:0071351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-18-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9012546"],"synonyms":[{"name":"interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:0035655"}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: PBO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor required for Sp1 transcriptional activation subunit 5","termid":"PBO:0043932"}


id: PBO:0031632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_germination","termid":"PBO:0031632"}


id: PBO:0080679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene","termid":"PBO:0080679"}


id: MONDO:0006982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Self-limited inflammation of the thyroid gland characterized by the presence of multinucleated giant cells. Patients present with neck pain, often associated with fever and dysphagia. The clinical course includes an initial phase of hyperthyroidism, followed by a phase of hypothyroidism, and eventually a return to normal thyroid function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute thyroiditis","termid":"MONDO:0001949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute thyroiditis","secondary_identifiers":["icd11.foundation:1320394379","ICD10CM:E06.1","MEDGEN:21549","MESH:D013968","EFO:1001194","ICD9:245.1","DOID:7165","NCIT:C35071","SCTID:428041004","NCIT:C35828","UMLS:C0040149","MedDRA:10042298"],"synonyms":[{"name":"De Quervain thyroiditis","type":"exact"},{"name":"De Quervain's thyroiditis","type":"exact"},{"name":"DeQuervain thyroiditis","type":"exact"},{"name":"Subacute granulomatous thyroiditis","type":"exact"},{"name":"Subacute thyroiditis","type":"exact"},{"name":"de Quervain's thyroiditis","type":"exact"},{"name":"giant-cell thyroiditis","type":"exact"},{"name":"granulomatous thyroiditis","type":"exact"}],"termid":"MONDO:0006982","xrefs":{"Monarch":{"xref_id":"0006982"}}}


id: GO:1903176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903176)","synonyms":[{"name":"regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903176"}


id: PR:Q9USV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf7 gene.","definition_xrefs":["UniProtKB:Q9USV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.04c","synonyms":[{"name":"Spom972h-cwf7","type":"exact"},{"name":"complexed with cdc5 protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"splicing factor 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV3"}


id: PBO:0030218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity","termid":"PBO:0030218"}


id: GO:0005755
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-transporting ATP synthase, coupling factor CF(0) (obsolete GO:0005755)","synonyms":[{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"exact"}],"termid":"GO:0005755"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: PBO:0034727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cereviaie YER035W and YGL222C","termid":"PBO:0034727"}


id: PBO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 36","termid":"PBO:0070360"}


id: PR:Q09749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adiponectin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOR-like receptor SPBC12C2.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.09c","secondary_identifiers":["UniProtKB:Q09749"],"synonyms":[{"name":"Spom972h-ADIPOR2","type":"exact"}],"termid":"PR:Q09749"}


id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: FYPO:0007891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the mating-type region than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spatial extent of heterochromatin assembly","termid":"FYPO:0005849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of mating-type region heterochromatin assembly","termid":"FYPO:0007891"}


id: GO:0060157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion.","definition_xrefs":["PMID:18276178","GOC:dph","GOC:mr","PMID:11768524","GOC:ln","PMID:538956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder development","termid":"GO:0060157"}


id: GO:0071840
data:
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