# terms

id: MONDO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin K. It may lead to bleeding, manifested with ecchymoses, petechiae, and hematomas. In infants it may cause hemorrhagic disease of newborn with intracranial and retroperitoneal bleeding.","definition_xrefs":["NCIT:C99108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K deficiency hemorrhagic disease","secondary_identifiers":["SCTID:52675005","UMLS:C0272348","DOID:11249","MEDGEN:543992","ICD9:269.0","MESH:D014813","ICD10CM:E56.1"],"synonyms":[{"name":"deficiency of vitamin K","type":"exact"},{"name":"vitamin K deficiency","type":"exact"},{"name":"vitamin K deficiency coagulation disorder","type":"exact"}],"termid":"MONDO:0001244","xrefs":{"Monarch":{"xref_id":"0001244"}}}


id: PBO:0029065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_riboflavin_binding","termid":"PBO:0029065"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: PBO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.4","termid":"PBO:0000257"}


id: MONDO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the middle cranial fossa.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle cranial fossa meningioma","secondary_identifiers":["MEDGEN:277369","NCIT:C5586","UMLS:C1334757","DOID:4749"],"synonyms":[{"name":"meningioma (disease) of middle cranial fossa","type":"exact"},{"name":"meningioma of middle cranial fossa","type":"exact"},{"name":"meningioma of the middle cranial fossa","type":"exact"},{"name":"middle cranial fossa meningioma (disease)","type":"exact"}],"termid":"MONDO:0003121","xrefs":{"Monarch":{"xref_id":"0003121"}}}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: GO:0047532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopiperazine + H2O = glycylglycine.","definition_xrefs":["EC:3.5.2.13","RHEA:21808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"2,5-dioxopiperazine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03810","MetaCyc:25-DIOXOPIPERAZINE-HYDROLASE-RXN"],"synonyms":[{"name":"2,5-dioxopiperazine amidohydrolase activity","type":"related"},{"name":"cyclo(Gly-Gly) hydrolase activity","type":"related"},{"name":"cyclo(glycylglycine) hydrolase activity","type":"related"}],"termid":"GO:0047532"}


id: PR:Q9Y7I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B3.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.20","synonyms":[{"name":"Spom972h-SPAC1B3.20","type":"exact"}],"termid":"PR:Q9Y7I1"}


id: GO:1990550
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96068],"is_not":false,"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The process in which alpha-ketoglutarate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11013234","PMID:20371607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transport","termid":"GO:0015742"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990552"],"synonyms":[{"name":"mitochondrial 2-oxoglutarate transmembrane transport","type":"exact"}],"termid":"GO:1990550","terms_by_termid":{"GO:1990550":null}}


id: PBO:0078317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 2","termid":"PBO:0078317"}


id: GO:0016807
data:
  {"annotated_genes":["SJAG_01481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76417],"is_not":false,"summary":null,"term":"GO:0016807"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"cysteine-type carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.18.-"],"termid":"GO:0016807","terms_by_termid":{"GO:0016807":null}}


id: MONDO:1011888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hydranencephaly and cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:001689"],"termid":"MONDO:1011888","xrefs":{"Monarch":{"xref_id":"1011888"}}}


id: GO:1990719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C2 axonemal microtubule (also called C2 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["GOC:cilia","PMID:21586547","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"C1 axonemal microtubule","synonyms":[{"name":"C1 tubule","type":"broad"}],"termid":"GO:1990719"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_04156","SJAG_00815","SJAG_02225","SJAG_03275","SJAG_01126","SJAG_00106","SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57126,61212,70640,104331,105633,107909,112001],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0005488","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: GO:0050774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite morphogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of dendrite morphogenesis","termid":"GO:0048814"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"negatively_regulates","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite morphogenesis","synonyms":[{"name":"down regulation of dendrite morphogenesis","type":"exact"},{"name":"down-regulation of dendrite morphogenesis","type":"exact"},{"name":"downregulation of dendrite morphogenesis","type":"exact"},{"name":"inhibition of dendrite morphogenesis","type":"narrow"}],"termid":"GO:0050774"}


id: FYPO:0005205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased DNA polymerase processivity factor activity","termid":"FYPO:0005205"}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: PBO:0031271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_condensation","termid":"PBO:0031271"}


id: MONDO:0008604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb with double phalanges","secondary_identifiers":["MESH:C566028","MEDGEN:395985","OMIM:190500","UMLS:C1860807"],"synonyms":[{"name":"triphalangeal thumb with double phalanges","type":"exact"}],"termid":"MONDO:0008604","xrefs":{"Monarch":{"xref_id":"0008604"}}}


id: PBO:0088830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Rix1","termid":"PBO:0088830"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: GO:0099123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dopamine from the somatodendritic compartment (cell body or dendrites) of a neuron.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21576241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine secretion","termid":"GO:0014046"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"somato-dendritic dopamine secretion","synonyms":[{"name":"STD DA release","type":"exact"},{"name":"STD dopamine release","type":"exact"},{"name":"somatodendritic dopamine release","type":"exact"}],"termid":"GO:0099123"}


id: GO:0015317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphate(out) + H+(out) = phosphate(in) + H+(in).","definition_xrefs":["TC:2.A.1.9.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphate:proton symporter activity","secondary_identifiers":["GO:0015320"],"synonyms":[{"name":"phosphate ion carrier activity","type":"exact"},{"name":"phosphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015317"}


id: PBO:0039451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and MYND domain containing 2","termid":"PBO:0039451"}


id: MOD:00032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is not chemically categorized.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncategorized protein modification","termid":"MOD:00032"}


id: PBO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2419","termid":"PBO:0055004"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: GO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["PMID:17208187"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA demethylation (obsolete GO:0080111)","termid":"GO:0080111"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0053753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 993","termid":"PBO:0053753"}


id: PBO:0090158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1","termid":"PBO:0090158"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: PBO:0091792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Muk1","termid":"PBO:0091792"}


id: PBO:0030899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_regulation_phenotype_during_vegetative_growth","termid":"PBO:0030899"}


id: MONDO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dental caries that involves the enamel.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamel caries","secondary_identifiers":["SCTID:80353004","MEDGEN:540214","ICD9:521.01","UMLS:C0266853","DOID:217"],"synonyms":[{"name":"dental caries limited to enamel","type":"exact"},{"name":"dental caries of enamel","type":"exact"},{"name":"enamel dental caries","type":"exact"},{"name":"primary dental caries","type":"exact"},{"name":"simple dental cavity","type":"exact"}],"termid":"MONDO:0002233","xrefs":{"Monarch":{"xref_id":"0002233"}}}


id: MONDO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setting-Sun phenomenon, familial benign","secondary_identifiers":["UMLS:C1833577","MEDGEN:318913","OMIM:600598","MESH:C563470"],"synonyms":[{"name":"setting-Sun phenomenon, familial benign","type":"exact"}],"termid":"MONDO:0010904","xrefs":{"Monarch":{"xref_id":"0010904"}}}


id: GO:0097339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycolate is transported across a membrane. Glycolate is the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:am","PMID:11283302","PMID:11785976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate transport","termid":"GO:1900866"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycolate transmembrane transport","synonyms":[{"name":"glycolate membrane transport","type":"exact"}],"termid":"GO:0097339"}


id: PBO:0084646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus end-tracking protein; forms a complex with Kar9p that makes up the cortical microtubule capture site and delays the exit from mitosis when the spindle is oriented abnormally; homolog of human end binding protein 1 (EB1)","termid":"PBO:0084646"}


id: FYECO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Uracil was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000070 absence of uracil (obsolete FYECO:0000070)","termid":"FYECO:0000070"}


id: PBO:0057038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR130A host gene","termid":"PBO:0057038"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_05000","SJAG_03189","SJAG_00188","SJAG_01497","SJAG_03428","SJAG_02096","SJAG_02746","SJAG_01074","SJAG_00898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65367,71597,77126,78395,79979,102660,105182,115690],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[114010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["PMID:20185543","GOC:mah","GOC:jh2","PMID:19170872","PMID:18557701","PMID:20117091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: PBO:0074575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 31","termid":"PBO:0074575"}


id: GO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"positive regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002157"}


id: GO:0072209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell differentiation","termid":"GO:0072007"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesangial cell differentiation","termid":"GO:0072209"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: PBO:0080897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta","termid":"PBO:0080897"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: PBO:0017765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase (predicted)","termid":"PBO:0017765"}


id: PBO:0081717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 646","termid":"PBO:0081717"}


id: PR:O74884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.14c","synonyms":[{"name":"Spom972h-rpl2402","type":"exact"}],"termid":"PR:O74884"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mlr","PMID:35325114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: PBO:0076660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 22","termid":"PBO:0076660"}


id: PBO:0088744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0088744"}


id: PBO:0071641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 5","termid":"PBO:0071641"}


id: GO:0006734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH metabolic process (obsolete GO:0006734)","synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734"}


id: PBO:0076675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1","termid":"PBO:0076675"}


id: PBO:0065253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20F, pseudogene","termid":"PBO:0065253"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl","PMID:10961912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: PBO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 65","termid":"PBO:0071224"}


id: MONDO:1010452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, rabbit","secondary_identifiers":["OMIA:000162-9986"],"termid":"MONDO:1010452","xrefs":{"Monarch":{"xref_id":"1010452"}}}


id: GO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via synthesis-dependent strand annealing.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA double-strand break processing involved in repair via synthesis-dependent strand annealing","termid":"GO:0010791"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: MONDO:0019225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of gluconeogenesis.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"disorder of gluconeogenesis","secondary_identifiers":["GARD:18956","MEDGEN:1843360","Orphanet:79177","UMLS:C1398833"],"synonyms":[{"name":"gluconeogenesis disorder","type":"exact"},{"name":"inborn error of gluconeogenesis","type":"exact"},{"name":"inborn gluconeogenesis disorder","type":"exact"},{"name":"rare inborn error of gluconeogenesis","type":"exact"}],"termid":"MONDO:0019225","xrefs":{"Monarch":{"xref_id":"0019225"}}}


id: SO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A attribute describing the addition of a poly A tail to the 3' end of a mRNA molecule.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated","termid":"SO:0000246"}


id: PR:Q9C0Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.07c gene.","definition_xrefs":["UniProtKB:Q9C0Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB24D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.07c","synonyms":[{"name":"Spom972h-SPAPB24D3.07c","type":"exact"}],"termid":"PR:Q9C0Y7"}


id: PBO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 51, pseudogene","termid":"PBO:0044425"}


id: PBO:0066713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 10","termid":"PBO:0066713"}


id: MONDO:0007919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary lymphedema in which the cause of the disease is a mutation in the FLT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 1","secondary_identifiers":["MEDGEN:309963","UMLS:C1704423","DOID:0070212","OMIM:153100","Orphanet:79452","GARD:3328","DOID:0070210","SCTID:399889006"],"synonyms":[{"name":"FLT4 hereditary lymphedema","type":"exact"},{"name":"LMPH1A","type":"exact"},{"name":"Milroy disease","type":"exact"},{"name":"Nonne-Milroy disease","type":"exact"},{"name":"Nonne-Milroy lymphedema","type":"exact"},{"name":"Nonne-Milroy syndrome","type":"exact"},{"name":"Nonne’s syndrome","type":"exact"},{"name":"congenital hereditary lymphedema","type":"exact"},{"name":"congenital primary lymphedema","type":"exact"},{"name":"early onset lymphedema","type":"exact"},{"name":"hereditary lymphedema 1","type":"exact"},{"name":"hereditary lymphedema caused by mutation in FLT4","type":"exact"},{"name":"hereditary lymphedema type I","type":"exact"},{"name":"lymphedema, early-onset","type":"exact"},{"name":"lymphedema, hereditary, 1A","type":"exact"},{"name":"lymphedema, hereditary, type 1A","type":"exact"},{"name":"primary congenital lymphedema","type":"exact"}],"termid":"MONDO:0007919","xrefs":{"Monarch":{"xref_id":"0007919"}}}


id: RO:HOM0000071
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves structures with the same or similar relative positions.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homotopy_relationship_with","synonyms":[{"name":"homotopous to","type":"exact"}],"termid":"RO:HOM0000071"}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: PBO:0024872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Bdf1","termid":"PBO:0024872"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: GO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Unc13b (or orthologs thereof).","definition_xrefs":["PMID:8999968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Unc13 complex","synonyms":[{"name":"SNARE complex (Snap25, Syt1, Unc13b, Vamp2, Stx1b2, Stx1a)","type":"narrow"},{"name":"Snap25-Syt1-Unc13b-Vamp2-Stx1b2-Stx1a complex","type":"narrow"}],"termid":"GO:0070768"}


id: PBO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO38 divergent transcript","termid":"PBO:0047400"}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: PR:O74534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sec1 family domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04874","PANTHER:PTHR11679:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sly1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.01","secondary_identifiers":["UniProtKB:O74534"],"synonyms":[{"name":"Spom972h-SCFD1","type":"exact"}],"termid":"PR:O74534"}


id: PATO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"funnel-shaped","termid":"PATO:0002521"}


id: GO:0047856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydrocoumarin + H2O = 3-(2-hydroxyphenyl)propanoate + H+.","definition_xrefs":["RHEA:10360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dihydrocoumarin hydrolase activity","secondary_identifiers":["EC:3.1.1.35","MetaCyc:DIHYDROCOUMARIN-LIPASE-RXN","KEGG_REACTION:R03692"],"synonyms":[{"name":"3,4-dihydrocoumarin hydrolase activity","type":"exact"},{"name":"dihydrocoumarin lactonohydrolase activity","type":"related"},{"name":"dihydrocoumarin lipase activity","type":"exact"}],"termid":"GO:0047856"}


id: GO:0097185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["GOC:yaf","PMID:16846222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to azide","termid":"GO:0097184"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to azide","termid":"GO:0097185"}


id: MONDO:0009794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 4 is characterized by lingual hamartoma, postaxial polysyndactyly of hands and feet, and mesomelic shortening of the legs with supinate equinovarus feet.","definition_xrefs":["Orphanet:2753"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome IV","secondary_identifiers":["MEDGEN:98358","OMIM:258860","UMLS:C0406727","DOID:0060374","MESH:C537133","SCTID:239031000","GARD:816"],"synonyms":[{"name":"Baraitser-Burn syndrome","type":"exact"},{"name":"Mohr-Majewski syndrome","type":"exact"},{"name":"OFD syndrome 4","type":"related"},{"name":"OFD4","type":"exact"},{"name":"Ofd syndrome with tibial defects","type":"related"},{"name":"Ofd syndrome, Baraitser-Burn type","type":"related"},{"name":"Ofds 4","type":"related"},{"name":"oral facial digital syndrome 4","type":"related"},{"name":"oral facial digital syndrome type 4","type":"related"},{"name":"oral-Facial-digital syndrome, type 4","type":"related"},{"name":"oral-facial-digital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome 4","type":"related"},{"name":"orofaciodigital syndrome IV","type":"exact"},{"name":"orofaciodigital syndrome type 4","type":"exact"},{"name":"orofaciodigital syndrome type IV","type":"exact"},{"name":"orofaciodigital syndrome with tibial dysplasia","type":"related"}],"termid":"MONDO:0009794","xrefs":{"Monarch":{"xref_id":"0009794"}}}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["EC:4.1.1.75","RHEA:11340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.75-RXN","KEGG_REACTION:R03178"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: FYPO:0001604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in cytosol","synonyms":[{"name":"abnormal cytosolic level of substance","type":"exact"},{"name":"abnormal level of substance in cytosol","type":"exact"},{"name":"abnormal level of substance in cytosol during vegetative growth","type":"exact"},{"name":"altered cytosolic level of substance","type":"exact"},{"name":"altered level of substance in cytosol during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001604"}


id: PBO:0074957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-8","termid":"PBO:0074957"}


id: GO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP metabolic process (obsolete GO:0030815)","synonyms":[{"name":"down regulation of cAMP metabolic process","type":"exact"},{"name":"down-regulation of cAMP metabolic process","type":"exact"},{"name":"downregulation of cAMP metabolic process","type":"exact"},{"name":"inhibition of cAMP metabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"negative regulation of cAMP metabolism","type":"exact"},{"name":"negative regulation of cyclic AMP metabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP metabolism","type":"exact"}],"termid":"GO:0030815"}


id: PBO:0039755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein","termid":"PBO:0039755"}


id: GO:0019414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An aerobic respiration process in which a sulfur-containing molecule (hydrogen sulfide, sulfur, sulfite, thiosulfate, and various polythionates) is oxidized.","definition_xrefs":["PMID:11425697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using sulfur or sulfate as electron donor","synonyms":[{"name":"aerobic respiration, using sulphur or sulphate as electron donor","type":"exact"}],"termid":"GO:0019414"}


id: PBO:0077255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 6","termid":"PBO:0077255"}


id: PBO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 7","termid":"PBO:0070703"}


id: PBO:0077844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 3","termid":"PBO:0077844"}


id: MONDO:1012065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"autosomal dwarfism, non-human animal","termid":"MONDO:1011942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dwarfism, chicken","secondary_identifiers":["OMIA:000303-9031"],"termid":"MONDO:1012065","xrefs":{"Monarch":{"xref_id":"1012065"}}}


id: PBO:0039491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A14, pseudogene","termid":"PBO:0039491"}


id: PBO:0056494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 2","termid":"PBO:0056494"}


id: PBO:0111689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit beta","termid":"PBO:0111689"}


id: PBO:0029644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_fragmented_nucleus_and_increased_septum_thickness","termid":"PBO:0029644"}


id: PATO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks all parts of type","secondary_identifiers":["PATO:0001557","OBO_REL:lacks_part"],"synonyms":[{"name":"lacks all physical parts of type","type":"exact"}],"termid":"PATO:0002000"}


id: PBO:0045552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5 pseudogene 1","termid":"PBO:0045552"}


id: PBO:0064559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POMP pseudogene 1","termid":"PBO:0064559"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27268497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: MONDO:0008768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis in which the cause of the disease is a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult neuronal ceroid lipofuscinosis","termid":"MONDO:0019260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0002561","MONDO:0005559"],"is_obsolete":false,"name":"ceroid lipofuscinosis, neuronal, 6B (Kufs type)","secondary_identifiers":["Orphanet:228340","UMLS:C5561927","DOID:0110730","GARD:6845","MEDGEN:1794137","OMIM:204300"],"synonyms":[{"name":"CLN4A","type":"exact"},{"name":"CLN4A disease","type":"related"},{"name":"CLN6 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Kuf's disease type A","type":"related"},{"name":"Kuf's disease, autosomal recessive","type":"related"},{"name":"adult neuronal ceroid lipofuscinosis 4A","type":"related"},{"name":"autosomal recessive neuronal ceroid lipofuscinosis 4A","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 4A, autosomal recessive","type":"related"},{"name":"neuronal ceroid lipofuscinosis 4A","type":"exact"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 4A","type":"exact"}],"termid":"MONDO:0008768","xrefs":{"Monarch":{"xref_id":"0008768"}}}


id: GO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075085)","synonyms":[{"name":"activation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by host of symbiont transmembrane receptor protein activity involved in cAMP-mediated signal transduction","type":"exact"},{"name":"stimulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075085"}


id: GO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"},{"relation_name":"positively_regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of non-professional antigen presenting cell antigen processing and presentation","synonyms":[{"name":"activation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of non-professional antigen presenting cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"},{"name":"upregulation of non-professional antigen presenting cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002621"}


id: PR:O42972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0588 membrane protein C20F10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.02c","synonyms":[{"name":"Spom972h-SPBC20F10.02c","type":"exact"}],"termid":"PR:O42972"}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: MONDO:0019162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inherited form of hypertension characterized by hyperkalemia, hyperchloremic metabolic acidosis, normal or elevated aldosterone, low renin, and normal renal function.","definition_xrefs":["Orphanet:757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited pseudohypoaldosteronism","termid":"MONDO:0100323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2","secondary_identifiers":["GARD:4553","icd11.foundation:715347509","OMIMPS:145260","ICD9:588.89","NANDO:2200369","UMLS:C1449844","MEDGEN:259599","SCTID:15689008","NCIT:C123252"],"synonyms":[{"name":"Gordon hyperkalemia-hypertension syndrome","type":"exact"},{"name":"Gordon syndrome","type":"related"},{"name":"PHA2","type":"exact"},{"name":"PHAII","type":"exact"},{"name":"Spitzer-Weinstein syndrome","type":"exact"},{"name":"chloride shunt syndrome","type":"exact"},{"name":"familial hyperkalemic hypertension","type":"exact"},{"name":"hyperkalemia-hypertension syndrome, Gordon type","type":"exact"},{"name":"hyperpotassemia and hypertension familial","type":"related"},{"name":"hypertensive hyperkalemia","type":"exact"},{"name":"mineralocorticoid resistant hyperkalemia","type":"exact"},{"name":"pseudohypoaldosteronism, type 2","type":"exact"},{"name":"pseudohypoaldosteronism, type II","type":"exact"}],"termid":"MONDO:0019162","xrefs":{"Monarch":{"xref_id":"0019162"}}}


id: GO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subcomplex of the cytosolic proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"part_of","term_name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle, lid subcomplex","termid":"GO:0031615"}


id: PBO:0077497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 216","termid":"PBO:0077497"}


id: PBO:0068327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 32","termid":"PBO:0068327"}


id: FYPO:0002646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation during mitosis (obsolete FYPO:0002646)","synonyms":[{"name":"decreased peptidyl-serine phosphorylation during mitosis","type":"exact"},{"name":"decreased protein serine phosphorylation during M phase during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation during mitotic M phase","type":"related"},{"name":"decreased serine phosphorylation during mitosis","type":"exact"},{"name":"reduced protein serine phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002646"}


id: GO:0099533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}


id: GO:1904015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["PMID:1505525","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to serotonin","termid":"GO:1904014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to serotonin","termid":"GO:1904015"}


id: GO:0097079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in).","definition_xrefs":["PMID:20861301","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"selenite:proton symporter activity","synonyms":[{"name":"selenite:H+ symporter activity","type":"exact"},{"name":"selenite:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097079"}


id: PBO:0052492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 6","termid":"PBO:0052492"}


id: MONDO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Li-Campeau syndrome","secondary_identifiers":["UMLS:C5543068","MEDGEN:1788485","OMIM:619189"],"synonyms":[{"name":"LICAS","type":"exact"}],"termid":"MONDO:0030963","xrefs":{"Monarch":{"xref_id":"0030963"}}}


id: PBO:0069859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1146, pseudogene","termid":"PBO:0069859"}


id: PBO:0064478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG alternative reading frame","termid":"PBO:0064478"}


id: GO:0055046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation as the microspore to the mature structure.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametogenesis","secondary_identifiers":["Wikipedia:Microgametogenesis"],"synonyms":[{"name":"pollen development from the microspore","type":"exact"}],"termid":"GO:0055046"}


id: PBO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously expressed prefoldin like chaperone","termid":"PBO:0080118"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20412803","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: PBO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 1","termid":"PBO:0043695"}


id: MONDO:0700149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that affects dogs. It arises from muscle, fat, fibrous tissue, bone, cartilage, and blood vessels.","definition_xrefs":["NCIT:C128195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine sarcoma","termid":"MONDO:0700149","xrefs":{"Monarch":{"xref_id":"0700149"}}}


id: PBO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 ribonucleoprotein","termid":"PBO:0048371"}


id: FYPO:0007006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination downstream of replication fork barriers is increased.","definition_xrefs":["PMID:30667359","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"increased DNA recombination downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"increased recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"increased template switching recombination downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007006"}


id: PBO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruption of interaction between Cdc27 and Pcn1 makes Cdc24-Dna2 complex dispensible","termid":"PBO:0001779"}


id: MONDO:0100502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Biallelic constitutional/germline loss-of-function NTHL1 variants confer predisposition to tumor formation demonstrating ‘COSMIC Signature 30’ mutation profile. Tumors have been reported at multiple primary sites; in particular adenomatous polyposis of colon (~10-50 polyps), colorectal cancer, and breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTHL1-deficiency tumor predisposition syndrome","termid":"MONDO:0100502","xrefs":{"Monarch":{"xref_id":"0100502"}}}


id: GO:1900249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translational elongation","synonyms":[{"name":"activation of cytoplasmic translational elongation","type":"narrow"},{"name":"up regulation of cytoplasmic translational elongation","type":"exact"},{"name":"up-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"upregulation of cytoplasmic translational elongation","type":"exact"}],"termid":"GO:1900249"}


id: MONDO:0009447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, split hairs, and amino aciduria","secondary_identifiers":["MESH:C565471","MEDGEN:344576","OMIM:242550","UMLS:C1855786"],"synonyms":[{"name":"ichthyosis, split hairs, and amino aciduria","type":"exact"}],"termid":"MONDO:0009447","xrefs":{"Monarch":{"xref_id":"0009447"}}}


id: PBO:0059314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53 pseudogene 1","termid":"PBO:0059314"}


id: PBO:0062863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 2","termid":"PBO:0062863"}


id: GO:0009123
data:
  {"annotated_genes":["SJAG_04709","SJAG_04882","SJAG_04123","SJAG_04845","SJAG_00964","SJAG_02038","SJAG_01937","SJAG_04354","SJAG_01055","SJAG_01661","SJAG_04627","SJAG_01081","SJAG_03164","SJAG_00694","SJAG_03708","SJAG_03771","SJAG_03355","SJAG_01814","SJAG_00533","SJAG_00044","SJAG_04970","SJAG_04713","SJAG_04634","SJAG_00197","SJAG_01859","SJAG_02850","SJAG_02364","SJAG_01070","SJAG_04849","SJAG_03140","SJAG_04681","SJAG_01974","SJAG_00444","SJAG_01298","SJAG_04487","SJAG_06634","SJAG_00779","SJAG_03811"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71494],"is_not":false,"summary":null,"term":"GO:0009123"},{"annotations":[80744,78758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[78533,60495,57122,58263,66780,73351,65405,71677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[59783,62652,61647,59408,57241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[59763,78170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[57274,75702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[69601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[70498,77547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[81253,71664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71663,81276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[74604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[113709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[59782,63868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[65332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[77410,100716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[80745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[65924,77411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[60478,62421,64386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009156"},{"annotations":[92446,86908,91447,87906,69602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[107834,77412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01055":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01937":null,"SJAG_01974":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03771":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"nucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009123","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0006226":null,"GO:0006231":null,"GO:0009123":null,"GO:0009156":null,"GO:0009159":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null,"GO:0046444":null}}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["PMID:13978319","PMID:25686250","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: PBO:0087889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor of nitric oxide oxidase; basic leucine zipper (bZIP) transcription factor; neighboring gene, YOL029C, created by frame-shift at position 708, corresponds to C-terminal part of YAP7 orthologs in other species; YAP7 has a paralog, YAP5, that arose from the whole genome duplication","termid":"PBO:0087889"}


id: FYPO:0006069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a small RNA (sRNA) is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-RNA interaction","termid":"FYPO:0002135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased small RNA binding","synonyms":[{"name":"increased protein-small RNA interaction","type":"exact"},{"name":"increased sRNA binding","type":"exact"},{"name":"increased small regulatory RNA binding","type":"exact"}],"termid":"FYPO:0006069"}


id: PBO:0077978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 1-1","termid":"PBO:0077978"}


id: MONDO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 26, X-linked, female-limited","secondary_identifiers":["OMIM:301010","UMLS:C4538795","MEDGEN:1618364"],"synonyms":[{"name":"MYP26","type":"related"},{"name":"myopia 26, X-linked, female-limited","type":"exact"}],"termid":"MONDO:0049221","xrefs":{"Monarch":{"xref_id":"0049221"}}}


id: GO:0098507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 5' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 5' dephosphorylation","termid":"GO:0098507"}


id: GO:0046466
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89296,108388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"membrane lipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid breakdown","type":"exact"},{"name":"membrane lipid catabolism","type":"exact"},{"name":"membrane lipid degradation","type":"exact"},{"name":"membrane lipid peroxidation","type":"broad"}],"termid":"GO:0046466","terms_by_termid":{"GO:0046521":null}}


id: MONDO:0035400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of autoimmune hepatitis characterized by the features of classic autoimmune hepatitis (i. e. clinical presentation as acute or chronic cryptogenic hepatitis, interface hepatitis on histological examination, elevated serum aspartate aminotransferase and alanine aminotransferase levels, hypergammaglobulinemia/elevated immunoglobulin G, therapeutic response to corticosteroids) in the absence of serum autoantibodies. Clinical manifestations include fatigue, malaise, arthralgia, jaundice, at later stages also signs of advanced chronic liver disease, such as spider nevi, caput medusae, splenomegaly, ascites, and palmar erythema. Presence of concurrent autoimmune diseases is frequently observed.","definition_xrefs":["Orphanet:563589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005046"],"is_obsolete":false,"name":"seronegative autoimmune hepatitis","secondary_identifiers":["GARD:22253","MEDGEN:1804383","ICD10CM:K75.4","UMLS:C5680121"],"synonyms":[{"name":"Seronegative AIH","type":"exact"},{"name":"autoantibody-negative autoimmune hepatitis","type":"exact"}],"termid":"MONDO:0035400","xrefs":{"Monarch":{"xref_id":"0035400"}}}


id: PBO:0028769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0028769"}


id: PBO:0091915
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-Like","termid":"PBO:0091915"}


id: PR:Q9P3U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dbl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.02","synonyms":[{"name":"DNA-break-localizing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dbl4","type":"exact"},{"name":"histone E3 ligase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U4"}


id: GO:1901003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fermentation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"negatively_regulates","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fermentation","synonyms":[{"name":"down regulation of fermentation","type":"exact"},{"name":"down-regulation of fermentation","type":"exact"},{"name":"downregulation of fermentation","type":"exact"},{"name":"inhibition of fermentation","type":"narrow"}],"termid":"GO:1901003"}


id: MONDO:0010259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region Xq26-q27.","definition_xrefs":["DOID:0110416","PMID:10690843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 24","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:854690","OMIM:300155","UMLS:C3887982","GARD:10389"],"synonyms":[{"name":"RP 24","type":"related"},{"name":"RP24","type":"exact"},{"name":"retinitis pigmentosa 24","type":"exact"},{"name":"retinitis pigmentosa type 24","type":"exact"}],"termid":"MONDO:0010259","xrefs":{"Monarch":{"xref_id":"0010259"}}}


id: GO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the heart.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart growth","termid":"GO:0060419"}


id: PBO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_pole_body_oscillation","termid":"PBO:0035777"}


id: MONDO:0014314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"sacral agenesis-abnormal ossification of the vertebral bodies-persistent notochordal canal syndrome","secondary_identifiers":["UMLS:C3810343","OMIM:615709","Orphanet:397927","MEDGEN:816673","GARD:17642"],"synonyms":[{"name":"SAVA","type":"related"},{"name":"sacral agenesis with vertebral anomalies","type":"related"}],"termid":"MONDO:0014314","xrefs":{"Monarch":{"xref_id":"0014314"}}}


id: PBO:0065119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C substrate 80K-H","termid":"PBO:0065119"}


id: MONDO:0958162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B lymphoblastic leukemia/lymphoma that is associated with DUX4 gene rearrangement.","definition_xrefs":["DOID:0081412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with DUX4 rearrangement","secondary_identifiers":["NCIT:C199232","UMLS:C5855478","MEDGEN:1848969"],"termid":"MONDO:0958162","xrefs":{"Monarch":{"xref_id":"0958162"}}}


id: PBO:0058895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12113","termid":"PBO:0058895"}


id: GO:0102711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A25 + 2-oxoglutarate + O2 = gibberellin A13 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A25,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102711)","termid":"GO:0102711"}


id: PBO:0038785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 1","termid":"PBO:0038785"}


id: GO:1902850
data:
  {"annotated_genes":["SJAG_00140","SJAG_02336","SJAG_02695","SJAG_07018","SJAG_04901","SJAG_00594","SJAG_02795","SJAG_00773","SJAG_02246","SJAG_01297","SJAG_03673","SJAG_00930","SJAG_02761","SJAG_00794","SJAG_02609","SJAG_01785","SJAG_02651","SJAG_02286","SJAG_01837","SJAG_00514","SJAG_02624","SJAG_04003","SJAG_03073","SJAG_03345","SJAG_03835","SJAG_04841","SJAG_02737","SJAG_02509","SJAG_01270","SJAG_01613","SJAG_04745","SJAG_01224","SJAG_01805","SJAG_03116","SJAG_04412","SJAG_00244","SJAG_01215","SJAG_02332","SJAG_01546","SJAG_00078","SJAG_04464","SJAG_03540","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104081,78104,104413,116553,96481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"},{"annotations":[77587,79592,94806],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[96275,102578,98733,75847],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[118294,109181,100509,96376,110160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[77383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[66710,70183,106983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[99901,94265,103075],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0061805"},{"annotations":[98131,99369,107823,100967,103429,99902,96787],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[98739,100968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[94267,96788,98740,108424,78946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[97779,111716,75250,113543,97310,73475,77607,78129,87210,78684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007052"},{"annotations":[111018],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[73200],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[114651],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"},{"annotations":[89337],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any microtubule cytoskeleton organization that is involved in mitosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:18799626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00140":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00594":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01270":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01785":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03345":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in mitosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"microtubule cytoskeleton organisation involved in mitosis","type":"exact"},{"name":"microtubule cytoskeleton organization and biogenesis involved in mitosis","type":"related"},{"name":"microtubule dynamics involved in mitosis","type":"exact"}],"termid":"GO:1902850","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0000132":null,"GO:0007052":null,"GO:0051228":null,"GO:0051256":null,"GO:0060236":null,"GO:0061804":null,"GO:0061805":null,"GO:0090307":null,"GO:0110161":null,"GO:0110162":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: PBO:0055589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3025","termid":"PBO:0055589"}


id: RO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a research artifact and an entity it is used to study, in virtue of its replicating or approximating features of the studied entity.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_model_of","termid":"RO:0003301"}


id: PBO:0055747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activating regulator of DKK1","termid":"PBO:0055747"}


id: PBO:0091904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf6 (frameshifted)","termid":"PBO:0091904"}


id: GO:0070560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proteins by a platelet or group of platelets.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein secretion by platelet","termid":"GO:0070560"}


id: PBO:0073546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and SYLF domain containing 1","termid":"PBO:0073546"}


id: MONDO:0016338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy","termid":"MONDO:0005021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-familial dilated cardiomyopathy","secondary_identifiers":["Orphanet:217629","MEDGEN:1843057","GARD:20530","icd11.foundation:1782708952","UMLS:C5681849"],"termid":"MONDO:0016338","xrefs":{"Monarch":{"xref_id":"0016338"}}}


id: PBO:0086653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YOR292C is not an essential gene","termid":"PBO:0086653"}


id: PBO:0074778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3K","termid":"PBO:0074778"}


id: PR:O74989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pbi2 gene.","definition_xrefs":["UniProtKB:O74989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.12","synonyms":[{"name":"Spom972h-pbi2","type":"exact"}],"termid":"PR:O74989"}


id: GO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(4-oxo-4,5-dihydro-1H-imidazol-5-yl)propanoic acid + H2O = N-formimidoyl-L-glutamate + H+.","definition_xrefs":["EC:3.5.2.7","RHEA:23660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"imidazolonepropionase activity","secondary_identifiers":["KEGG_REACTION:R02288","MetaCyc:IMIDAZOLONEPROPIONASE-RXN"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity","type":"related"},{"name":"4(5)-imidazolone-5(4)-propionic acid hydrolase activity","type":"related"},{"name":"imidazolone propionic acid hydrolase activity","type":"related"},{"name":"imidazolone-5-propionate hydrolase activity","type":"related"}],"termid":"GO:0050480"}


id: MONDO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 25, primary, autosomal recessive","secondary_identifiers":["UMLS:C5193046","OMIM:618351","GARD:16346","MEDGEN:1674123"],"synonyms":[{"name":"MCPH25","type":"related"},{"name":"MICROCEPHALY 25, PRIMARY, AUTOSOMAL RECESSIVE","type":"related"}],"termid":"MONDO:0032694","xrefs":{"Monarch":{"xref_id":"0032694"}}}


id: MONDO:0015207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic esophageal malformation (obsolete MONDO:0015207)","secondary_identifiers":["Orphanet:108959"],"synonyms":[{"name":"isolated esophageal malformation","type":"exact"},{"name":"nonsyndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015207","xrefs":{"Monarch":{"xref_id":"0015207"}}}


id: MONDO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies is a group of clinically heterogeneous diseases, commonly defined by lack of cellular energy due to defects of oxidative phosphorylation (OXPHOS), resulting from pathogenic mutations in the nuclear DNA. Mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies includes diseases classified according to defects in: genes encoding structural components of OXPHOS complexes (such as Leigh syndrome, coenzyme Q10 deficiency); genes encoding assembly factors of OXPHOS complexes (such as GRACILE syndrome); genes altering the stability of mitochondrial DNA (such as autosomal dominant progressive external ophthalmoplegia, mitochondrial DNA depletion syndrome); mitochondrial protein synthesis.","definition_xrefs":["Orphanet:2443"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies (obsolete MONDO:0016578)","synonyms":[{"name":"OXPHOS disease due to nDNA anomalies","type":"exact"},{"name":"OXPHOS disease due to nuclear DNA anomalies","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to nDNA anomalies","type":"exact"}],"termid":"MONDO:0016578","xrefs":{"Monarch":{"xref_id":"0016578"}}}


id: MONDO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"immunoskeletal dysplasia with neurodevelopmental abnormalities","secondary_identifiers":["UMLS:C4479452","OMIM:617425","MEDGEN:1381460"],"synonyms":[{"name":"IMMUNOSKELETAL dysplasia with neurodevelopmental abnormalities","type":"related"},{"name":"ISDNA","type":"related"}],"termid":"MONDO:0044312","xrefs":{"Monarch":{"xref_id":"0044312"}}}


id: PBO:0083427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR063C","termid":"PBO:0083427"}


id: MONDO:0014214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in compound heterozygous mutation in the WDR60 gene on chromosome 7q36.","definition_xrefs":["PMID:23910462","DOID:0110094"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 8 with or without polydactyly","secondary_identifiers":["UMLS:C3809691","MEDGEN:816021","GARD:15975","OMIM:615503"],"synonyms":[{"name":"SRPS6","type":"exact"},{"name":"SRTD8","type":"exact"},{"name":"short rib-polydactyly syndrome type VI","type":"exact"},{"name":"short rib-polydactyly syndrome, type 6","type":"related"},{"name":"short-rib thoracic dysplasia 8 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014214","xrefs":{"Monarch":{"xref_id":"0014214"}}}


id: MONDO:0013401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4E1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 51","secondary_identifiers":["GARD:13737","UMLS:C3151056","MEDGEN:462406","OMIM:613744","DOID:0110803","NORD:1990"],"synonyms":[{"name":"AP4E1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ4","type":"exact"},{"name":"SPG51","type":"exact"},{"name":"Spastic Paraplegia 51","type":"exact"},{"name":"autosomal dominant spastic paraplegia 51","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 4","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 4, formerly","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in AP4E1","type":"exact"},{"name":"hereditary spastic paraplegia type 51","type":"exact"},{"name":"spastic paraplegia 51, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 4","type":"exact"}],"termid":"MONDO:0013401","xrefs":{"Monarch":{"xref_id":"0013401"}}}


id: PBO:0049351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 9","termid":"PBO:0049351"}


id: GO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.","definition_xrefs":["MetaCyc:ALADEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-alanine oxidation to pyruvate via D-alanine","termid":"GO:0019480"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: GO:1905195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["PMID:26545917","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ATPase activity, uncoupled (obsolete GO:1905195)","synonyms":[{"name":"regulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905195"}


id: PBO:0071099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 101","termid":"PBO:0071099"}


id: MONDO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","secondary_identifiers":["OMIMPS:105500"],"termid":"MONDO:0030923","xrefs":{"Monarch":{"xref_id":"0030923"}}}


id: GO:0106248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["GOC:mah","PMID:29932902"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106248)","termid":"GO:0106248"}


id: PBO:0047319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 3","termid":"PBO:0047319"}


id: PBO:0038595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase medium chain","termid":"PBO:0038595"}


id: MONDO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ACTH-independent Cushing syndrome due to rare cortisol-producing adrenal tumor (obsolete MONDO:0018627)","secondary_identifiers":["Orphanet:443287"],"termid":"MONDO:0018627","xrefs":{"Monarch":{"xref_id":"0018627"}}}


id: GO:0043270
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of ion transport","type":"narrow"},{"name":"stimulation of ion transport","type":"narrow"},{"name":"up regulation of ion transport","type":"exact"},{"name":"up-regulation of ion transport","type":"exact"},{"name":"upregulation of ion transport","type":"exact"}],"termid":"GO:0043270","terms_by_termid":{"GO:1905665":null}}


id: PBO:0081178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 28","termid":"PBO:0081178"}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_00168","SJAG_01233","SJAG_03563","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81845,114275,112607,119236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: GO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase in the context of cell wall biogenesis, the assembly and arrangement of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity involved in cell wall organization or biogenesis (obsolete GO:0000199)","synonyms":[{"name":"activation of MAPK activity involved in cell wall biogenesis","type":"narrow"},{"name":"activation of MAPK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPK activity","type":"exact"}],"termid":"GO:0000199"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02722","PANTHER:PTHR10644:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: MONDO:1010924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, Duchenne type, non-human animal","termid":"MONDO:1010199"},{"relation_name":"is_a","term_name":"muscular dystrophy, domestic cat","termid":"MONDO:1010912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, domestic cat","secondary_identifiers":["OMIA:001081-9685"],"termid":"MONDO:1010924","xrefs":{"Monarch":{"xref_id":"1010924"}}}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["PMID:14663147","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"Ala-tRNA(Pro) deacylase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: GO:0106019
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063","SJAG_03375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76755,75620,77197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate phosphatase activity","termid":"GO:0034593"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0106019","terms_by_termid":{"GO:0004439":null}}


id: MONDO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the lymph nodes in the axilla.","definition_xrefs":["NCIT:C27333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"axillary lymphadenitis","secondary_identifiers":["UMLS:C0919797","MEDGEN:182522","DOID:4640"],"synonyms":[{"name":"axilla lymphadenitis (disease)","type":"exact"},{"name":"axillary adenitis","type":"related"},{"name":"axillary lymphadenitis","type":"exact"},{"name":"lymphadenitis (disease) of axilla","type":"exact"}],"termid":"MONDO:0003070","xrefs":{"Monarch":{"xref_id":"0003070"}}}


id: GO:0052722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fatty acid + O2 + 2 NADPH + H+ = fatty acid with in-chain hydroxy group + 2 NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-12186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid in-chain hydroxylase activity","secondary_identifiers":["RHEA:45084"],"termid":"GO:0052722"}


id: GO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space.","definition_xrefs":["PMID:5272312","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"septate junction assembly","termid":"GO:0019991"}


id: MONDO:0007095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ameloonychohypohidrotic syndrome","secondary_identifiers":["GARD:647","Orphanet:1028","MEDGEN:400184","OMIM:104570","SCTID:715404000","UMLS:C1863006","MESH:C538245"],"synonyms":[{"name":"amelo-onycho-hypohidrotic syndrome","type":"related"},{"name":"ameloonychohypohidrotic syndrome","type":"exact"},{"name":"hypocalcified-hypoplastic enamel, onycholysis with subungual hyperkeratosis, and hypohidrosis","type":"related"}],"termid":"MONDO:0007095","xrefs":{"Monarch":{"xref_id":"0007095"}}}


id: PBO:0029358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_dGTP_level","termid":"PBO:0029358"}


id: MONDO:0011582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","secondary_identifiers":["DOID:0080133","GARD:17661","OMIM:605711","UMLS:C3276432","MEDGEN:478062","Orphanet:401869"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: PBO:0085560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT4, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085560"}


id: MONDO:0030300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that is characterized by neonatal onset of severe cardiomyopathy, with rapid progression to cardiac decompensation and death unless the patient undergoes heart transplantation and that has material basis in homozygous or compound heterozygous mutation in the RPL3L gene on chromosome 16p13.","definition_xrefs":["DOID:0081160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 2D","secondary_identifiers":["MEDGEN:1782612","UMLS:C5543535","OMIM:619371"],"synonyms":[{"name":"CMD2D","type":"exact"},{"name":"cardiomyopathy, dilated, 2D","type":"exact"}],"termid":"MONDO:0030300","xrefs":{"Monarch":{"xref_id":"0030300"}}}


id: MONDO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, infantile epilepsy syndrome disease characterized by neonatal- to infancy-onset myoclonic focal seizures occurring in various members of a family, associated in some with mild dysarthria, ataxia and borderline-to-moderate intellectual disability.","definition_xrefs":["Orphanet:352582"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial infantile myoclonic epilepsy","secondary_identifiers":["MEDGEN:181488","GARD:17521","OMIM:605021","UMLS:C0917800"],"synonyms":[{"name":"Eim","type":"related"},{"name":"FIME","type":"exact"},{"name":"familial infantile myoclonus epilepsy","type":"exact"},{"name":"myoclonic epilepsy, familial infantile","type":"related"},{"name":"myoclonic epilepsy, infantile, familial","type":"exact"}],"termid":"MONDO:0011506","xrefs":{"Monarch":{"xref_id":"0011506"}}}


id: MONDO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin. There is cellular atypia, increased layering of cells, complexity of glands, and papillary formations.","definition_xrefs":["NCIT:C5243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinoma","secondary_identifiers":["GARD:21651","DOID:3606","EFO:0006462","icd11.foundation:869438441","Orphanet:398961","MEDGEN:235418","UMLS:C1335167"],"synonyms":[{"name":"mucinous adenocarcinoma of ovary","type":"exact"},{"name":"mucinous adenocarcinoma of the ovary","type":"exact"},{"name":"mucinous carcinoma of ovary","type":"exact"},{"name":"mucinous carcinoma of the ovary","type":"exact"},{"name":"ovarian mucinous adenocarcinoma","type":"exact"},{"name":"ovarian mucinous carcinoma","type":"exact"},{"name":"ovary mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0005601","xrefs":{"Monarch":{"xref_id":"0005601"}}}


id: GO:2000564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"}


id: GO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"negatively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aecium development","termid":"GO:0075270"}


id: MONDO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 89 and autoimmunity","secondary_identifiers":["OMIM:619632","MEDGEN:1794237","UMLS:C5562027"],"synonyms":[{"name":"IMD89","type":"exact"}],"termid":"MONDO:0030484","xrefs":{"Monarch":{"xref_id":"0030484"}}}


id: MOD:01318
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12422359","Unimod:178#S","PubMed:11510821","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation to amine thiol","termid":"MOD:00535"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol - site S","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:01318"}


id: MONDO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neurological disorder characterized by the association of slowly progressive spinocerebellar degeneration and corneal dystrophy, manifesting with bilateral corneal opacities (which lead to severe visual impairment), mild intellectual disability, ataxia, gait disturbances, and tremor. Additional manifestations include facial dysmorphism (i.e. triangular face, ptosis, low-set, posteriorly angulated ears, and micrognathia), as well as mild upper motor neuron involvement with hypertonia, lower limb hyperreflexia and extensor plantar responses. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:3177"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary ataxia","termid":"MONDO:0100309"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal-cerebellar syndrome","secondary_identifiers":["OMIM:271310","MESH:C535472","SCTID:720750004","GARD:1525","icd11.foundation:577494924","UMLS:C1849087","MEDGEN:341379"],"synonyms":[{"name":"Der Kaloustian Jarudi Khoury syndrome","type":"related"},{"name":"Der Kaloustian-Jarudi-Khoury syndrome","type":"exact"},{"name":"corneal cerebellar syndrome","type":"related"},{"name":"corneal dystrophy with spinocerebellar Degeneration","type":"related"},{"name":"corneal-cerebellar syndrome","type":"exact"},{"name":"spinocerebellar degeneration and corneal dystrophy","type":"related"},{"name":"spinocerebellar degeneration corneal dystrophy","type":"related"},{"name":"spinocerebellar degeneration-corneal dystrophy syndrome","type":"exact"}],"termid":"MONDO:0010063","xrefs":{"Monarch":{"xref_id":"0010063"}}}


id: PBO:0066112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRP3 antisense RNA 1","termid":"PBO:0066112"}


id: PBO:0081860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 792","termid":"PBO:0081860"}


id: GO:0062168
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100970],"is_not":false,"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of plus-end directed microtubule sliding","termid":"GO:0062169"},{"relation_name":"negatively_regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062168","terms_by_termid":{"GO:0062168":null}}


id: GO:0043596
data:
  {"annotated_genes":["SJAG_03722","SJAG_02074","SJAG_02724","SJAG_00618","SJAG_03451","SJAG_01762","SJAG_01267","SJAG_02394","SJAG_02667","SJAG_02198","SJAG_00399","SJAG_04190","SJAG_01823","SJAG_03927","SJAG_02818","SJAG_03780","SJAG_00696","SJAG_00729","SJAG_04272","SJAG_03128","SJAG_02439","SJAG_00884","SJAG_04995","SJAG_00863","SJAG_02182","SJAG_01010","SJAG_02800","SJAG_00536","SJAG_05301","SJAG_03898","SJAG_00857","SJAG_00327","SJAG_04183","SJAG_02908","SJAG_05239","SJAG_02610","SJAG_02627","SJAG_00272","SJAG_04879","SJAG_02172","SJAG_04671","SJAG_00198","SJAG_05197","SJAG_03855","SJAG_04150","SJAG_04877","SJAG_00814","SJAG_04210","SJAG_03097","SJAG_00611","SJAG_00958","SJAG_00153","SJAG_03495","SJAG_01698","SJAG_02348","SJAG_00874","SJAG_04994","SJAG_05232","SJAG_04791","SJAG_01354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57176,58550,61740,61798,63599,67317,75627,79284,89906,90127,92031,92462,94316,94560,95499,96824,98810,98927,100126,102403,102846,103511,103678,103747,106897,107280,107388,107608,109510,110848,110966,111223,111482,112327,112743,112764,113155,115003,117802],"is_not":false,"summary":null,"term":"GO:0043596"},{"annotations":[72148,74708,77015,76624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[102352,72750,78652,76847],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[115849,78976,82070],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[112415,78243,78878,70502,74410,79566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[112096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[80035,98865,82160],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"nuclear replication fork","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0043596","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: MONDO:0009411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune polyendocrinopathy type 1, or APECED syndrome, is a genetic disease that manifests in childhood or early adolescence with a combination of chronic mucocutaneous candidiasis, hypoparathyroidism and autoimmune adrenal failure.","definition_xrefs":["Orphanet:3453"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired chronic primary adrenal insufficiency (obsolete MONDO:0015130)","termid":"MONDO:0015130"},{"relation_name":"excluded_subClassOf","term_name":"acquired primary ovarian failure","termid":"MONDO:0019851"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"hereditary hypoparathyroidism","termid":"MONDO:0016165"},{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"},{"relation_name":"is_a","term_name":"autoimmune hypoparathyroidism","termid":"MONDO:0018242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrine syndrome type 1","secondary_identifiers":["NANDO:2200738","DOID:0050167","NANDO:2200346","MEDGEN:39125","ICD9:258.8","NORD:798","OMIM:240300","GARD:8466","SCTID:11244009","UMLS:C0085859","NCIT:C129727"],"synonyms":[{"name":"AIRE autoimmune polyendocrinopathy","type":"exact"},{"name":"APECED syndrome","type":"exact"},{"name":"APS 1","type":"related"},{"name":"APS type 1","type":"exact"},{"name":"APS1","type":"exact"},{"name":"Autoimmune Polyglandular Syndrome Type 1","type":"exact"},{"name":"MEDAC syndrome","type":"exact"},{"name":"PGA 1","type":"related"},{"name":"Whitaker syndrom","type":"exact"},{"name":"Whitaker syndrome","type":"related"},{"name":"aire autoimmune polyendocrinopathy","type":"exact"},{"name":"autoimmune hypoparathyroidism-chronic candidiasis-Addison disease syndrome","type":"exact"},{"name":"autoimmune polyendocrine syndrome type 1","type":"exact"},{"name":"autoimmune polyendocrine syndrome, type I, with or without reversible metaphyseal dysplasia","type":"related"},{"name":"autoimmune polyendocrinopathy caused by mutation in AIRE","type":"exact"},{"name":"autoimmune polyendocrinopathy caused by mutation in aire","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia","type":"exact"},{"name":"autoimmune polyendocrinopathy syndrome type 1","type":"related"},{"name":"autoimmune polyendocrinopathy syndrome, type I, autosomal dominant","type":"related"},{"name":"autoimmune polyendocrinopathy type 1","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy","type":"exact"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED)","type":"related"},{"name":"autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy syndrome","type":"exact"},{"name":"autoimmune polyglandular syndrome I","type":"exact"},{"name":"autoimmune polyglandular syndrome type 1","type":"exact"},{"name":"autoimmune polyglandular syndrome, type 1","type":"related"},{"name":"ham syndrome","type":"exact"},{"name":"hypoadrenocorticism with hypoparathyroidism and superficial Moniliasis","type":"related"},{"name":"hypoparathyroidism-Addison disease-mucocutaneous candidiasis syndrome","type":"exact"},{"name":"multiple endocrine deficiency-Addison disease-candidiasis syndrome","type":"exact"},{"name":"polyglandular autoimmune syndrome type 1","type":"exact"},{"name":"polyglandular autoimmune syndrome, type 1","type":"related"},{"name":"polyglandular deficiency syndrome, Persian-Jewish type","type":"related"}],"termid":"MONDO:0009411","xrefs":{"Monarch":{"xref_id":"0009411"}}}


id: GO:0033025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell apoptotic process","synonyms":[{"name":"regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033025"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: FYPO:0003420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is higher than normal during a cellular response to cadmium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutathione level during vegetative growth","termid":"FYPO:0001521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione level during cellular response to cadmium ion","synonyms":[{"name":"increased cellular GSH level during cellular response to cadmium","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione level during cellular response to cadmium during vegetative growth","type":"exact"},{"name":"increased cellular reduced glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased glutathione accumulation during cellular response to cadmium","type":"related"}],"termid":"FYPO:0003420"}


id: PBO:0015237
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAM1","termid":"PBO:0015237"}


id: PR:Q96VG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ost4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96VG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.15c","synonyms":[{"name":"OTase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ost4","type":"exact"},{"name":"oligosaccharyl transferase 4 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96VG2"}


id: PBO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERG-positive prostate cancer associated androgen responsive transcript","termid":"PBO:0046410"}


id: GO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["EC:4.2.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"chondroitin AC lyase activity","synonyms":[{"name":"ChnAC","type":"related"},{"name":"chondroitin AC eliminase activity","type":"related"},{"name":"chondroitin lyase activity","type":"exact"},{"name":"chondroitin sulfate lyase activity","type":"related"},{"name":"chondroitinase AC","type":"related"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0030341"}


id: PBO:0053602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 632","termid":"PBO:0053602"}


id: PBO:0039959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 2","termid":"PBO:0039959"}


id: PBO:0110344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colitis associated IRF1 antisense regulator of intestinal homeostasis","termid":"PBO:0110344"}


id: PBO:0042114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: PBO:0084045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation; controls phosphorylation of multiple proteins","termid":"PBO:0084045"}


id: PBO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 1","termid":"PBO:0061661"}


id: PBO:0056512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBNL1 antisense RNA 1","termid":"PBO:0056512"}


id: PBO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Npr2/3 complex subunit Npr2 (predicted)","termid":"PBO:0001577"}


id: GO:0018862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + phosphate = CO2 + H2O + phenyl phosphate.","definition_xrefs":["RHEA:74015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenyl-phosphate phosphatase/carboxylase activity","secondary_identifiers":["EC:4.1.1.123","MetaCyc:PHENYLPCARB-RXN","KEGG_REACTION:R05603","UM-BBD_reactionID:r0157"],"synonyms":[{"name":"phenylphosphate carboxylase activity","type":"exact"}],"termid":"GO:0018862"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: GO:0030876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an alpha and a beta receptor subunit and an interleukin ligand. In human, Interleukin-19, -20 and -24 bind IL20RA/IL20RB receptor subunits and Interleukin-20 and -24 bind IL22RA1/IL20RB receptor subunits.","definition_xrefs":["PMID:12351624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-20 receptor complex","synonyms":[{"name":"IL-20 receptor complex","type":"exact"}],"termid":"GO:0030876"}


id: MONDO:0009152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An isolated ectopia lentis that has material basis in homozygous or compound heterozygous mutation in the ADAMTSL4 gene on chromosome 1q21.","definition_xrefs":["DOID:0111149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated ectopia lentis","termid":"MONDO:0015998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis 2, isolated, autosomal recessive","secondary_identifiers":["UMLS:C3541474","OMIM:225100","GARD:2060","MEDGEN:762100"],"synonyms":[{"name":"ECTOL2","type":"exact"},{"name":"autosomal recessive isolated ectopia lentis","type":"related"},{"name":"autosomal recessive isolated ectopia lentis 2","type":"related"},{"name":"ectopia lentis 2, isolated, autosomal recessive","type":"exact"},{"name":"ectopia lentis, isolated autosomal recessive","type":"related"},{"name":"ectopia lentis, isolated, autosomal recessive","type":"exact"}],"termid":"MONDO:0009152","xrefs":{"Monarch":{"xref_id":"0009152"}}}


id: GO:0043128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of 1-phosphatidylinositol 4-kinase.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of 1-phosphatidylinositol 4-kinase activity (obsolete GO:0043128)","synonyms":[{"name":"activation of 1-phosphatidylinositol 4-kinase activity","type":"narrow"},{"name":"positive regulation of PI4K activity","type":"exact"},{"name":"stimulation of 1-phosphatidylinositol 4-kinase activity","type":"narrow"},{"name":"up regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"up-regulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"upregulation of 1-phosphatidylinositol 4-kinase activity","type":"exact"}],"termid":"GO:0043128"}


id: MONDO:0017766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of mineral absorption and transport","termid":"MONDO:0017761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of manganese transport","secondary_identifiers":["Orphanet:309851","UMLS:C5681032","GARD:21358","MEDGEN:1843191"],"termid":"MONDO:0017766","xrefs":{"Monarch":{"xref_id":"0017766"}}}


id: MONDO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the ALPI gene.","definition_xrefs":["PMID:29567797","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ALPI-related inflammatory bowel disease","secondary_identifiers":["Orphanet:597887","GARD:22400","MEDGEN:1842198","UMLS:C5681586"],"termid":"MONDO:0035370","xrefs":{"Monarch":{"xref_id":"0035370"}}}


id: PBO:0029319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029319"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: PBO:0005336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase","termid":"PBO:0005336"}


id: PBO:0044588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide branched chain transacylase E2","termid":"PBO:0044588"}


id: PBO:0109054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIB1 associated lncRNA","termid":"PBO:0109054"}


id: SO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_cluster","synonyms":[{"name":"V D DJ cluster","type":"exact"},{"name":"V-D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000528"}


id: GO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 reduced flavodoxin + 6 H+ + N2 + n ATP = 6 oxidized flavodoxin + 2 NH3 + n ADP + n phosphate.","definition_xrefs":["EC:1.19.6.1","MetaCyc:NITROGENASE-FLAVODOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","termid":"GO:0016738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrogenase (flavodoxin) activity","secondary_identifiers":["RHEA:15645"],"synonyms":[{"name":"reduced flavodoxin:dinitrogen oxidoreductase (ATP-hydrolysing)","type":"related"}],"termid":"GO:0050142"}


id: GO:1900175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.","definition_xrefs":["GOC:vk","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900175)","synonyms":[{"name":"regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1900175"}


id: GO:0072753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glutathione stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glutathione","termid":"GO:1901370"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glutathione","termid":"GO:0072753"}


id: GO:0052572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host immune response","secondary_identifiers":["GO:0052564","Reactome:R-HSA-1222499"],"synonyms":[{"name":"response to immune response of other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052572"}


id: GO:0042177
data:
  {"annotated_genes":["SJAG_02244","SJAG_00052","SJAG_00475","SJAG_03048","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[79837,79314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[106502,79097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein catabolic process.","definition_xrefs":["GOC:obol","GOC:TermGenie","PMID:24785082","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:2000599","GO:1903363"],"synonyms":[{"name":"down regulation of cellular protein breakdown","type":"exact"},{"name":"down regulation of cellular protein catabolic process","type":"exact"},{"name":"down regulation of cellular protein catabolism","type":"exact"},{"name":"down regulation of cellular protein degradation","type":"exact"},{"name":"down regulation of protein catabolic process","type":"exact"},{"name":"down-regulation of cellular protein breakdown","type":"exact"},{"name":"down-regulation of cellular protein catabolic process","type":"exact"},{"name":"down-regulation of cellular protein catabolism","type":"exact"},{"name":"down-regulation of cellular protein degradation","type":"exact"},{"name":"down-regulation of protein catabolic process","type":"exact"},{"name":"downregulation of cellular protein breakdown","type":"exact"},{"name":"downregulation of cellular protein catabolic process","type":"exact"},{"name":"downregulation of cellular protein catabolism","type":"exact"},{"name":"downregulation of cellular protein degradation","type":"exact"},{"name":"downregulation of protein catabolic process","type":"exact"},{"name":"inhibition of cellular protein breakdown","type":"narrow"},{"name":"inhibition of cellular protein catabolic process","type":"narrow"},{"name":"inhibition of cellular protein catabolism","type":"narrow"},{"name":"inhibition of cellular protein degradation","type":"narrow"},{"name":"inhibition of protein catabolic process","type":"narrow"},{"name":"negative regulation of cellular protein breakdown","type":"exact"},{"name":"negative regulation of cellular protein catabolic process","type":"exact"},{"name":"negative regulation of cellular protein catabolism","type":"exact"},{"name":"negative regulation of cellular protein degradation","type":"exact"},{"name":"negative regulation of protein breakdown","type":"exact"},{"name":"negative regulation of protein catabolism","type":"exact"},{"name":"negative regulation of protein degradation","type":"exact"}],"termid":"GO:0042177","terms_by_termid":{"GO:0032435":null,"GO:1904293":null,"GO:1905785":null}}


id: GO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the semicircular canal by removing cells in the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by apoptotic process","synonyms":[{"name":"clearance of cells from fusion plate by apoptosis","type":"narrow"}],"termid":"GO:0060885"}


id: PBO:0064969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 25","termid":"PBO:0064969"}


id: GO:1990151
data:
  {"annotated_genes":["SJAG_02392","SJAG_03915","SJAG_01373","SJAG_01196","SJAG_03011","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90429,95348],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903067"},{"annotations":[90768,113643,115782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[103276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at the cell tip.","definition_xrefs":["PMID:22768263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell tip","type":"exact"}],"termid":"GO:1990151","terms_by_termid":{"GO:0099117":null,"GO:1903067":null,"GO:1990896":null}}


id: GO:0023035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cell surface receptor CD40 to one of its physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11348017","GOC:mtg_signal","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CD40 signaling pathway","synonyms":[{"name":"CD40 signalling pathway","type":"exact"}],"termid":"GO:0023035"}


id: PBO:0059809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 35","termid":"PBO:0059809"}


id: PR:O13905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain-containing protein C22A12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.14c","synonyms":[{"name":"Spom972h-SPAC22A12.14c","type":"exact"}],"termid":"PR:O13905"}


id: PBO:0062173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 16 pseudogene","termid":"PBO:0062173"}


id: PBO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L","termid":"PBO:0034555"}


id: PBO:0036330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl2","termid":"PBO:0036330"}


id: PBO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16","termid":"PBO:0090145"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["Pfam:PF00017","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: PBO:0063018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: PBO:0075766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 5","termid":"PBO:0075766"}


id: GO:0043520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of myosin II filament assembly","termid":"GO:0043520"}


id: PBO:0046585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 27","termid":"PBO:0046585"}


id: MONDO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the mammary gland in animals (mammary glands, animal).","definition_xrefs":["MESH:D015674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mammary neoplasms, animal","secondary_identifiers":["OMIA:001777"],"synonyms":[{"name":"animal mammary carcinoma","type":"related"},{"name":"animal mammary carcinomas","type":"related"},{"name":"animal mammary neoplasm","type":"related"},{"name":"animal mammary neoplasms","type":"related"},{"name":"carcinoma, animal mammary","type":"related"},{"name":"carcinomas, animal mammary","type":"related"},{"name":"mammary carcinoma, animal","type":"related"},{"name":"mammary carcinomas, animal","type":"related"},{"name":"mammary neoplasm","type":"related"},{"name":"mammary neoplasm, animal","type":"related"},{"name":"mammary neoplasms","type":"related"},{"name":"neoplasm, animal mammary","type":"related"},{"name":"neoplasm, mammary","type":"related"},{"name":"neoplasms, animal mammary","type":"related"},{"name":"neoplasms, mammary","type":"related"}],"termid":"MONDO:0025483","xrefs":{"Monarch":{"xref_id":"0025483"}}}


id: PBO:0075074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 124","termid":"PBO:0075074"}


id: PATO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isometrical","termid":"PATO:0001573"}


id: GO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate + NADP+ = 4-methylcatechol + NADPH + H+ + CO2.","definition_xrefs":["EC:1.3.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.67-RXN","UM-BBD_reactionID:r0179"],"synonyms":[{"name":"4-methylcyclohexa-3,5-diene-1,2-cis-diol-1-carboxylic acid dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate:NAD(P)+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018520"}


id: PATO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000223 muscle strength (obsolete PATO:0000223)","termid":"PATO:0000223"}


id: PBO:0091585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga9","termid":"PBO:0091585"}


id: PBO:0081478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 354B","termid":"PBO:0081478"}


id: GO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to selenite ion","termid":"GO:0072714"}


id: GO:1903976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration.","definition_xrefs":["PMID:19100238","GOC:BHF","GO_REF:0000058","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"negatively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell migration","synonyms":[{"name":"down regulation of glia cell migration","type":"exact"},{"name":"down regulation of glial cell migration","type":"exact"},{"name":"down-regulation of glia cell migration","type":"exact"},{"name":"down-regulation of glial cell migration","type":"exact"},{"name":"downregulation of glia cell migration","type":"exact"},{"name":"downregulation of glial cell migration","type":"exact"},{"name":"inhibition of glia cell migration","type":"narrow"},{"name":"inhibition of glial cell migration","type":"narrow"},{"name":"negative regulation of glia cell migration","type":"exact"}],"termid":"GO:1903976"}


id: PBO:0074755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 114","termid":"PBO:0074755"}


id: PBO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis Complex","termid":"PBO:0013749"}


id: PBO:0040134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 18","termid":"PBO:0040134"}


id: GO:0022016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a glioblast in the pallium. A glioblast is a dividing precursor cell that gives rise to glial cells.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pallium glioblast division","synonyms":[{"name":"glioblast cell division in pallium","type":"exact"}],"termid":"GO:0022016"}


id: GO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo conjugation with cellular fusion, the process resulting in desensitization following exposure to pheromone stimulus that act to down-regulate further stimulation or block initial conjugation responses. An example of this is the adaptation to pheromone during conjugation with cellular fusion in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion","secondary_identifiers":["GO:0007331","GO:0030453"],"synonyms":[{"name":"adaptation of signalling pathway by response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"adaptation to pheromone during conjugation with cellular fusion","type":"related"},{"name":"desensitization to pheromone during conjugation with cellular fusion","type":"exact"}],"termid":"GO:0000754"}


id: PBO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP58 divergent transcript","termid":"PBO:0042850"}


id: GO:0008654
data:
  {"annotated_genes":["SJAG_01474","SJAG_04119","SJAG_04323","SJAG_04883","SJAG_00413","SJAG_00831","SJAG_05327","SJAG_00812","SJAG_01036","SJAG_03953","SJAG_01876","SJAG_03715","SJAG_04319","SJAG_03115","SJAG_01236","SJAG_02613","SJAG_03305","SJAG_01863","SJAG_04924","SJAG_04499","SJAG_02980","SJAG_03524","SJAG_03292","SJAG_05311","SJAG_03352","SJAG_03131","SJAG_06425","SJAG_04307","SJAG_03349","SJAG_04628","SJAG_00946","SJAG_02488","SJAG_02380","SJAG_00846","SJAG_03506","SJAG_00068","SJAG_01233","SJAG_00580","SJAG_00053","SJAG_03672","SJAG_04878","SJAG_01519","SJAG_03154","SJAG_00063","SJAG_02903","SJAG_01860","SJAG_00506","SJAG_00999","SJAG_03935","SJAG_04792","SJAG_00296","SJAG_03563","SJAG_02168","SJAG_01148","SJAG_05330","SJAG_03940","SJAG_00114","SJAG_02321","SJAG_04975","SJAG_00825","SJAG_04317","SJAG_01918","SJAG_04881","SJAG_01957","SJAG_03170","SJAG_01906","SJAG_04231","SJAG_01570","SJAG_02523","SJAG_04537","SJAG_02804","SJAG_03878","SJAG_04337","SJAG_05278","SJAG_02654","SJAG_04545","SJAG_01416","SJAG_02328","SJAG_06383","SJAG_01571","SJAG_02776","SJAG_02289","SJAG_04913","SJAG_02902","SJAG_04568","SJAG_03801","SJAG_04930","SJAG_03700","SJAG_03066","SJAG_01187","SJAG_01180","SJAG_04165","SJAG_00426","SJAG_00295","SJAG_01227","SJAG_04865","SJAG_00168","SJAG_02913","SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71842,80226,110105],"is_not":false,"summary":null,"term":"GO:0008654"},{"annotations":[91320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[117460,92515,73022,81846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[57102,61898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[81845,114275,119236,112607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[63515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"},{"annotations":[82122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043048"},{"annotations":[76066,81904,113340,101405,109053,88153,114505,99106,93925,106080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[99107,109054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[73129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[76731,58502,64497,92471,58089,63366,71574,61205,64287,75218,78146,103300,79674,78194,74901,103238,77273,89017,58341,79417,74624,73647,58516,78931,79447,79255,79244,80057,77257,86880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[76440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[114506,81956,76068,78938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[112126,94639,77238,91283,94748,81272,97009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[59709,89875],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[115083,110954],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[112336,109302],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0071072"},{"annotations":[63066,73247,73424,72857,79535,92532,104433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[94138,71993,95916,103868,79998,74257,92533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[80949,62700,68747,92534,72656,75279,103506,77136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[58996,92107,81896,78447,118452,116615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[90689,110714,118093,92699,110839,96203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[62406,62272,64017,73316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[68746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[117141],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phospholipid, a lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:25318672":null},"synonyms":[{"name":"phospholipid anabolism","type":"exact"},{"name":"phospholipid biosynthesis","type":"exact"},{"name":"phospholipid formation","type":"exact"},{"name":"phospholipid synthesis","type":"exact"}],"termid":"GO:0008654","terms_by_termid":{"GO:0006506":null,"GO:0006646":null,"GO:0006654":null,"GO:0006656":null,"GO:0006657":null,"GO:0006659":null,"GO:0006661":null,"GO:0008654":null,"GO:0009240":null,"GO:0010142":null,"GO:0016024":null,"GO:0019287":null,"GO:0032049":null,"GO:0033386":null,"GO:0036092":null,"GO:0043048":null,"GO:0046474":null,"GO:0046854":null,"GO:0050992":null,"GO:0051999":null,"GO:0071072":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null,"GO:2001211":null}}


id: PBO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 22","termid":"PBO:0045572"}


id: PBO:0027162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027162"}


id: MONDO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs as a result of the occlusion of the basilar artery. It may be caused by atherosclerosis, embolism or hemorrhage. Clinical signs include dizziness, headache, vomiting, hemiparesis or hemiplegia, dysarthria, dysphagia, blurred vision and loss of consciousness. The clinical course is variable and is dependent upon the extent of the occlusion and the location of the clot along the basilar artery which determines the resultant neurologic impairment. Prognosis is dismal in cases where a complete occlusion occurs with rapid deterioration of neurological function.","definition_xrefs":["NCIT:C34413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basilar artery insufficiency","secondary_identifiers":["ICD9:435.0","SCTID:64009001","UMLS:C0004812","DOID:223","MEDGEN:14039","MESH:D014715"],"synonyms":[{"name":"basilar artery syndrome","type":"exact"}],"termid":"MONDO:0002250","xrefs":{"Monarch":{"xref_id":"0002250"}}}


id: GO:0006577
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111119,103154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[103155,72688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"betaine metabolic process","type":"exact"},{"name":"betaine metabolism","type":"exact"}],"termid":"GO:0006577","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: MONDO:1011606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular disease, non-human animal","termid":"MONDO:1011414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, dog","secondary_identifiers":["OMIA:002263-9615"],"termid":"MONDO:1011606","xrefs":{"Monarch":{"xref_id":"1011606"}}}


id: GO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to estradiol","termid":"GO:0032355"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estradiol stimulus","synonyms":[{"name":"cellular response to E2 stimulus","type":"exact"}],"termid":"GO:0071392"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: GO:0140319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering a specific receptor ligand to prevent it from binding to its regular receptor.","definition_xrefs":["Wikipedia:Decoy_receptors"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"receptor decoy activity","secondary_identifiers":["GO:0005040"],"synonyms":[{"name":"decoy death receptor activity","type":"narrow"},{"name":"decoy receptor","type":"exact"}],"termid":"GO:0140319"}


id: MONDO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by the proliferation of spindle to cuboidal myoepithelial cells within small breast ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast myoepitheliosis","termid":"MONDO:0004262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast myoepitheliosis","secondary_identifiers":["UMLS:C1512935","NCIT:C40387","MEDGEN:268972","DOID:8068"],"termid":"MONDO:0004449","xrefs":{"Monarch":{"xref_id":"0004449"}}}


id: PBO:0056657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 24","termid":"PBO:0056657"}


id: PBO:0047105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member D, pseudogene","termid":"PBO:0047105"}


id: GO:0150031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to lysosome.","definition_xrefs":["GOC:bc","PMID:24305806","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to lysosome","termid":"GO:0150031"}


id: PBO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Smn1","termid":"PBO:0000611"}


id: PBO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 2","termid":"PBO:0042433"}


id: PBO:0038836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 3","termid":"PBO:0038836"}


id: PBO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase catalytic subunit Dpm1","termid":"PBO:0001843"}


id: GO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"positively_regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of peptide secretion","synonyms":[{"name":"activation of peptide secretion","type":"narrow"},{"name":"stimulation of peptide secretion","type":"narrow"},{"name":"up regulation of peptide secretion","type":"exact"},{"name":"up-regulation of peptide secretion","type":"exact"},{"name":"upregulation of peptide secretion","type":"exact"}],"termid":"GO:0002793"}


id: PBO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 5","termid":"PBO:0048860"}


id: MONDO:0015182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital enteropathy involving intestinal mucosa development (obsolete MONDO:0015182)","secondary_identifiers":["Orphanet:104007"],"termid":"MONDO:0015182","xrefs":{"Monarch":{"xref_id":"0015182"}}}


id: PBO:0063903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGY divergent transcript","termid":"PBO:0063903"}


id: FYPO:0004506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar chromatin organization is abnormal, such that nucleolar chromatin is distributed in a ring-shaped structure around the nuclear periphery rather than in a crescent-shaped structure on one side of the nucleus.","definition_xrefs":["PMID:18362178","PomBase:mah","GO:1990700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleolar chromatin organization","termid":"FYPO:0004505"},{"relation_name":"is_a","term_name":"abnormal chromatin organization resulting in peripheral chromatin distribution","termid":"FYPO:0005350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution","synonyms":[{"name":"abnormal chromatin organization at nucleolus resulting in peripheral chromatin distribution","type":"related"},{"name":"abnormal chromosome morphology, hollow bowl phenotype","type":"related"},{"name":"abnormal chromosome morphology, ring phenotype","type":"related"},{"name":"abnormal nucleolar chromatin organisation resulting in peripheral chromatin distribution","type":"exact"},{"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar chromatin organization resulting in peripheral chromatin distribution during vegetative growth","type":"exact"},{"name":"abnormal nucleolar chromatin organization resulting in ring-shaped chromatin distribution","type":"exact"},{"name":"nucleolar chromatin abnormally dispersed around nuclear periphery","type":"related"},{"name":"ring-shaped nuclear DNA","type":"related"},{"name":"ring-shaped nuclear chromatin distribution","type":"exact"}],"termid":"FYPO:0004506"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["PMID:24070999","PMID:23499754","GOC:giardia","PMID:23937520","PMID:24002067","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: MONDO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of the urethra in which the epithelial cells grow downward into the underlying supportive tissue.","definition_xrefs":["NCIT:C6173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral urothelial papilloma","termid":"MONDO:0002221"},{"relation_name":"is_a","term_name":"inverted urothelial papilloma","termid":"MONDO:0021109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra inverted papilloma","secondary_identifiers":["UMLS:C1336887","DOID:6934","MEDGEN:237034"],"synonyms":[{"name":"inverted papilloma of the urethra","type":"exact"},{"name":"inverted papilloma of urethra","type":"exact"},{"name":"urethra inverted papilloma","type":"exact"},{"name":"urethral inverted papilloma","type":"exact"}],"termid":"MONDO:0004042","xrefs":{"Monarch":{"xref_id":"0004042"}}}


id: MONDO:0006968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Compression of the rotator cuff tendons and subacromial bursa between the humeral head and structures that make up the coracoacromial arch and the humeral tuberosities. This condition is associated with subacromial bursitis and rotator cuff (largely supraspinatus) and bicipital tendon inflammation, with or without degenerative changes in the tendon. Pain that is most severe when the arm is abducted in an arc between 40 and 120 degrees, sometimes associated with tears in the rotator cuff, is the chief symptom. (From Jablonski's Dictionary of Syndromes and Eponymic Diseases, 2d ed)","definition_xrefs":["MESH:D019534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shoulder impingement syndrome","secondary_identifiers":["ICD10CM:M75.4","ICD9:726.2","UMLS:C0376685","MedDRA:10049039","DOID:14276","MEDGEN:138249","SCTID:202849001","EFO:1001178"],"synonyms":[{"name":"Impingement syndrome of shoulder region","type":"exact"},{"name":"shoulder impingement syndrome (disorder) [ambiguous]","type":"exact"},{"name":"subacromial impingement","type":"exact"}],"termid":"MONDO:0006968","xrefs":{"Monarch":{"xref_id":"0006968"}}}


id: SO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primer with one or more mismatches to the DNA template corresponding to a position within a restriction enzyme recognition site.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCAPS_primer","synonyms":[{"name":"dCAPS primer","type":"exact"},{"name":"derived cleaved amplified polymorphic primer","type":"exact"}],"termid":"SO:0001699"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["UniProtKB-KW:KW-1177","VZ:983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: FYPO:0007550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to hydroxyurea.","definition_xrefs":["PMID:19158664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to hydroxyurea","synonyms":[{"name":"increased number of Rad22 foci during cellular response to hydroxyurea","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to HU","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007550"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_03511","SJAG_07012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77076,98373],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: MONDO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly micropenis convulsions","secondary_identifiers":["GARD:3628","MEDGEN:444076","UMLS:C2931525","MESH:C537540"],"synonyms":[{"name":"microcephaly micropenis convulsions","type":"exact"},{"name":"microcephaly micropenis seizures","type":"related"},{"name":"microcephaly seizures genital hypoplasia","type":"related"}],"termid":"MONDO:0043133","xrefs":{"Monarch":{"xref_id":"0043133"}}}


id: GO:0019829
data:
  {"annotated_genes":["SJAG_01669","SJAG_04167","SJAG_02023","SJAG_01129","SJAG_04015","SJAG_02782","SJAG_01435","SJAG_00516","SJAG_01397","SJAG_02399","SJAG_05294","SJAG_01400","SJAG_00212","SJAG_04757","SJAG_01447","SJAG_03406","SJAG_04258","SJAG_01913","SJAG_01471","SJAG_03850","SJAG_03866","SJAG_00136","SJAG_04955","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72840,76930,81971],"is_not":false,"summary":null,"term":"GO:0019829"},{"annotations":[108233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[73191,82017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[79607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[111938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[79695,74971,72553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[75348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[63353,80244,81421,80297,61018,61264,62669,61979,58435,66542,69229,72971,65838,61803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02399":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled monoatomic cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5692480","Reactome:R-HSA-5251989"],"synonyms":[{"name":"ATP-dependent cation transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cation transmembrane transporter activity","type":"broad"},{"name":"cation ABC transporter","type":"narrow"},{"name":"cation-transporting ATPase activity","type":"exact"},{"name":"plasma membrane cation-transporting ATPase","type":"narrow"}],"termid":"GO:0019829","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008900":null,"GO:0015410":null,"GO:0019829":null,"GO:0043682":null,"GO:0046961":null,"GO:0140581":null}}


id: PBO:0084250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD4 has a paralog, IMD3, that arose from the whole genome duplication","termid":"PBO:0084250"}


id: GO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome organization","termid":"GO:0002934"}


id: PBO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglucosaminyltransferase (predicted)","termid":"PBO:0000170"}


id: MONDO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Vogt-Koyanagi-Harada disease (obsolete MONDO:0001486)","termid":"MONDO:0001486","xrefs":{"Monarch":{"xref_id":"0001486"}}}


id: GO:0075054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of penetration peg formation","secondary_identifiers":["GO:0075058"],"synonyms":[{"name":"modulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"modulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075054"}


id: MONDO:0005255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure characterized by mild symptoms (mild shortness of breath and/or angina) and slight limitation during ordinary activity.","definition_xrefs":["EFO:0003147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symptomatic heart failure","termid":"MONDO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mild heart failure","secondary_identifiers":["Wikipedia:New_York_Heart_Association_Functional_Classification"],"termid":"MONDO:0005255","xrefs":{"Monarch":{"xref_id":"0005255"}}}


id: PBO:0087899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulating multidrug resistance and oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro","termid":"PBO:0087899"}


id: MONDO:1012746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any androgen-dependent cystinuria that occurs in intact male dogs.","definition_xrefs":["PMID:34438894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"},{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex-limited cystinuria, dog","secondary_identifiers":["OMIA:001881-9615"],"synonyms":[{"name":"cystinuria, type III, dog","type":"related"}],"termid":"MONDO:1012746","xrefs":{"Monarch":{"xref_id":"1012746"}}}


id: GO:0097492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of a sympathetic neuron axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron axon guidance","synonyms":[{"name":"sympathetic neuron axon chemotaxis","type":"related"},{"name":"sympathetic neuron axon growth cone guidance","type":"narrow"},{"name":"sympathetic neuron axon pathfinding","type":"exact"}],"termid":"GO:0097492"}


id: GO:0043489
data:
  {"annotated_genes":["SJAG_04825","SJAG_03283","SJAG_04946","SJAG_03696","SJAG_02573","SJAG_00797","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80539,89655,99612,80499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[88950,72386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[90102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Prevention of degradation of RNA molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043489","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0090669":null}}


id: GO:0018707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + X-CH3 = X + 1-methoxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol methyltransferase activity (obsolete GO:0018707)","termid":"GO:0018707"}


id: PBO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.15.1.1","termid":"PBO:0000721"}


id: GO:0048835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of decreased petal number (obsolete GO:0048835)","termid":"GO:0048835"}


id: PR:O74927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.10","synonyms":[{"name":"Spom972h-met11","type":"exact"}],"termid":"PR:O74927"}


id: PBO:0003917
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corresponds to duplicated region flanking mating-type region","termid":"PBO:0003917"}


id: PBO:0055513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2947","termid":"PBO:0055513"}


id: PBO:0084721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; exposed to the mitochondrial matrix; associates with mitochondrial ribosomes; NOT required for respiratory growth; homolog of human Letm1, a protein implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084721"}


id: GO:0009229
data:
  {"annotated_genes":["SJAG_04866","SJAG_04282","SJAG_02421","SJAG_03362","SJAG_00381","SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66817,68862,79990,113181,113187,115622],"is_not":false,"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiamine diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"TPP biosynthesis","type":"exact"},{"name":"TPP biosynthetic process","type":"exact"},{"name":"thiamin diphosphate biosynthetic process","type":"exact"},{"name":"thiamin pyrophosphate biosynthesis","type":"exact"},{"name":"thiamin pyrophosphate biosynthetic process","type":"exact"},{"name":"thiamine diphosphate anabolism","type":"exact"},{"name":"thiamine diphosphate biosynthesis","type":"exact"},{"name":"thiamine diphosphate formation","type":"exact"},{"name":"thiamine diphosphate synthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthetic process","type":"exact"}],"termid":"GO:0009229","terms_by_termid":{"GO:0009229":null}}


id: PBO:0011413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_dependent_on","termid":"PBO:0011413"}


id: GO:0033924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in dextrans, to remove successive isomaltotriose units from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dextran 1,6-alpha-isomaltotriosidase activity","secondary_identifiers":["MetaCyc:3.2.1.95-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan isomaltotriohydrolase activity","type":"related"},{"name":"exo-isomaltotriohydrolase activity","type":"related"}],"termid":"GO:0033924"}


id: MONDO:0006659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Common occlusive arterial disease which is caused by atherosclerosis. It is characterized by lesions in the innermost layer (arterial intima) of arteries including the aorta and its branches to the extremities. Risk factors include smoking, hyperlipidemia, and hypertension.","definition_xrefs":["MESH:D001162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary atherosclerosis","termid":"MONDO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arteriosclerosis obliterans","secondary_identifiers":["UMLS:C0003851","DOID:5160","EFO:1000820","MedDRA:10065418","ICD9:440.8","SCTID:361133006","MEDGEN:13915"],"synonyms":[{"name":"arteriosclerosis obliterans (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006659","xrefs":{"Monarch":{"xref_id":"0006659"}}}


id: GO:0035027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate and their capacity to differentiate into leading edge cells. Leading edge cells are found at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"leading edge cell differentiation","termid":"GO:0035026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate commitment","termid":"GO:0035027"}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: PATO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001066 absolute stiffness (obsolete PATO:0001066)","termid":"PATO:0001066"}


id: PBO:0074713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74D","termid":"PBO:0074713"}


id: FYPO:0006309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing FLEX elements. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:26804917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at stress response genes","termid":"FYPO:0003812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleosome occupancy at FLEX element","synonyms":[{"name":"increased nucleosome occupancy at FLEX element during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at FLEX element during vegetative growth","type":"exact"}],"termid":"FYPO:0006309"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: GO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to becoming a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate commitment","termid":"GO:0042684"}


id: GO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP catabolic process (obsolete GO:0006200)","secondary_identifiers":["Wikipedia:ATP_hydrolysis"],"synonyms":[{"name":"ATP breakdown","type":"exact"},{"name":"ATP catabolism","type":"exact"},{"name":"ATP degradation","type":"exact"},{"name":"ATP hydrolysis","type":"narrow"}],"termid":"GO:0006200"}


id: GO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: barbiturate + H2O = malonate + urea.","definition_xrefs":["MetaCyc:BARBITURASE-RXN","EC:3.5.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"barbiturase activity","secondary_identifiers":["RHEA:18653"],"synonyms":[{"name":"barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)","type":"related"}],"termid":"GO:0047694"}


id: MOD:00936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - hydroxylactam adduct, K and N-term","synonyms":[{"name":"LG-Hlactam-K","type":"related"},{"name":"Levuglandinyl - lysine hydroxylactam adduct","type":"related"}],"termid":"MOD:00936"}


id: PBO:0076335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 3","termid":"PBO:0076335"}


id: GO:1901140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a p-coumaryl alcohol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"p-coumaryl alcohol transport","synonyms":[{"name":"4-hydroxycinnamyl alcohol transport","type":"exact"}],"termid":"GO:1901140"}


id: MONDO:0011106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome is a syndromic developmental defect of the eye characterized by dislocated or subluxated crystalline lenses, anterior segment abnormalities, and distinctive facial features such as flat cheeks and a prominent, beaked nose. Affected individuals may develop nontraumatic conjunctival cysts, also referred to as filtering blebs.","definition_xrefs":["Orphanet:412022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome","secondary_identifiers":["GARD:17688","MEDGEN:330396","MESH:C563293","OMIM:601552","UMLS:C1832167"],"synonyms":[{"name":"FDLAB","type":"related"},{"name":"FDLAB syndrome","type":"exact"},{"name":"Traboulsi syndrome","type":"exact"},{"name":"ectopia lentis, spontaneous filtering blebs, and craniofacial Dysmorphism","type":"related"},{"name":"facial dysmorphism, lens dislocation, anterior segment abnormalities, and spontaneous filtering blebs","type":"related"},{"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-nontraumatic conjunctive cysts syndrome","type":"exact"},{"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome","type":"exact"}],"termid":"MONDO:0011106","xrefs":{"Monarch":{"xref_id":"0011106"}}}


id: PATO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate placement","termid":"PATO:0001932"}


id: GO:0110094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using polyphosphate as the signal.","definition_xrefs":["PMID:28584190","GOC:rjd","PMID:27519410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"polyphosphate-mediated signaling","synonyms":[{"name":"polyphosphate signaling","type":"exact"}],"termid":"GO:0110094"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: GO:0006667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["PMID:29165427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"sphinganine metabolic process","synonyms":[{"name":"dihydrosphingosine metabolic process","type":"exact"},{"name":"dihydrosphingosine metabolism","type":"exact"},{"name":"sphinganine metabolism","type":"exact"}],"termid":"GO:0006667"}


id: MONDO:0019475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subcutaneous panniculitis-like T-cell lymphoma (SPTCL) is a rare cytotoxic cutaneous lymphoma that has been recognized as a distinct subset of peripheral T-cell lymphomas originating and presenting primarily in the subcutaneous fat tissue.","definition_xrefs":["Orphanet:86884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"indolent primary cutaneous T-cell lymphoma","termid":"MONDO:0015816"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"subcutaneous panniculitis-like T-cell lymphoma","secondary_identifiers":["UMLS:C0522624","GARD:10193","ICD10CM:C86.3","ICDO:9708/3","MESH:C537503","NANDO:2200030","ONCOTREE:SPTCL","OMIM:618398","MEDGEN:99306","NCIT:C6918","icd11.foundation:1550338805","EFO:1000552","ICD9:202.70","SCTID:404133000"],"synonyms":[{"name":"SPTCL","type":"exact"},{"name":"T-CELL LYMPHOMA, SUBCUTANEOUS PANNICULITIS-LIKE","type":"related"},{"name":"subcutaneous panniculitic T-cell lymphoma","type":"exact"},{"name":"subcutaneous panniculitis-like T-cell lymphoma","type":"exact"},{"name":"subcutaneous panniculitis-like T-cell lymphoma (Alpha/Beta type)","type":"exact"},{"name":"subcutaneous panniculitis-like T-cell lymphoma, Alpha/Beta type","type":"exact"}],"termid":"MONDO:0019475","xrefs":{"Monarch":{"xref_id":"0019475"}}}


id: GO:1904685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:BHF","PMID:18591254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"},{"relation_name":"is_a","term_name":"positive regulation of metallopeptidase activity","termid":"GO:1905050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metalloendopeptidase activity","synonyms":[{"name":"activation of metalloendopeptidase activity","type":"narrow"},{"name":"activation of metalloendoprotease activity","type":"narrow"},{"name":"activation of metalloendoproteinase activity","type":"narrow"},{"name":"positive regulation of metalloendoprotease activity","type":"narrow"},{"name":"positive regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up regulation of metalloendopeptidase activity","type":"exact"},{"name":"up regulation of metalloendoprotease activity","type":"narrow"},{"name":"up regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up-regulation of metalloendopeptidase activity","type":"exact"},{"name":"up-regulation of metalloendoprotease activity","type":"narrow"},{"name":"up-regulation of metalloendoproteinase activity","type":"narrow"},{"name":"upregulation of metalloendopeptidase activity","type":"exact"},{"name":"upregulation of metalloendoprotease activity","type":"narrow"},{"name":"upregulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904685"}


id: MONDO:1011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, cattle","secondary_identifiers":["OMIA:002082-9913"],"termid":"MONDO:1011499","xrefs":{"Monarch":{"xref_id":"1011499"}}}


id: PBO:0091902
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription unchanged","termid":"PBO:0091902"}


id: PBO:0090646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9","termid":"PBO:0090646"}


id: FYPO:0002538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during cellular response to hydroxyurea","termid":"FYPO:0004188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002538"}


id: GO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin, etc.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle","termid":"GO:0042303"}


id: MONDO:0008077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurofibromatosis, type 1 (obsolete MONDO:0008077)","termid":"MONDO:0008077","xrefs":{"Monarch":{"xref_id":"0008077"}}}


id: PBO:0064824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3F","termid":"PBO:0064824"}


id: FYPO:0006030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cortical patches.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cortical patches present in decreased numbers","termid":"FYPO:0004964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"actin cortical patches absent from cell","synonyms":[{"name":"absent actin cortical patches","type":"exact"},{"name":"actin cortical patches absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cortical patches absent from cell during vegetative growth","type":"exact"},{"name":"actin patches absent from cell","type":"exact"}],"termid":"FYPO:0006030"}


id: GO:0085017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invasion by a symbiont of a cell of a host organism, forming a vacuole in which the symbiont resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ends when the host cell membrane closes behind the newly-formed vacuole.","definition_xrefs":["PMID:18665841","PMID:8690024","GOC:jl","PMID:9580555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host cell by a symbiont-containing vacuole","secondary_identifiers":["GO:0052370"],"synonyms":[{"name":"symbiont entry into host cell forming a parasitophorous vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a pathogen-containing vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a symbiont-containing vacuole","type":"related"}],"termid":"GO:0085017"}


id: PBO:0029267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0029267"}


id: PBO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 23","termid":"PBO:0050761"}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: PBO:0055637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3076","termid":"PBO:0055637"}


id: PBO:0052286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDSR divergent transcript","termid":"PBO:0052286"}


id: PR:Q9P7R6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03892","PANTHER:PTHR20978:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.05","secondary_identifiers":["UniProtKB:Q9P7R6"],"synonyms":[{"name":"Spom972h-SF3B5","type":"exact"}],"termid":"PR:Q9P7R6"}


id: PBO:0031095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formation_of_azygotic_ascus_upon_sporulation_(obsolete_FYPO:0000279)","termid":"PBO:0031095"}


id: MONDO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous microphthalmia (obsolete MONDO:0010303)","termid":"MONDO:0010303","xrefs":{"Monarch":{"xref_id":"0010303"}}}


id: PBO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease (predicted)","termid":"PBO:0004800"}


id: PBO:0108835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase Siw14","termid":"PBO:0108835"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["EC:2.7.7.32","RHEA:17165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.32-RXN","KEGG_REACTION:R02329"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: MONDO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone dysplasia characterized by genu valgum, metaphyseal anomalies with broadening of the long bones extending into the diaphyses and giving the femora and tibiae an 'Erlenmeyer flask'' appearance, widening of the ribs and clavicles, platyspondyly and cortical thinning.","definition_xrefs":["Orphanet:3005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pyle disease","secondary_identifiers":["OMIM:265900","DOID:0080019","icd11.foundation:651364947","MEDGEN:82704","UMLS:C0265294","ICD10CM:Q78.5","ICD9:758.5","GARD:4612","NANDO:2201367","SCTID:27837003","MESH:C536252"],"synonyms":[{"name":"Bakwin-Krida syndrome","type":"exact"},{"name":"Pyl","type":"related"},{"name":"Pyle disease","type":"exact"},{"name":"Pyle's disease","type":"exact"},{"name":"Pyle's syndrome","type":"exact"},{"name":"Pyle-Cohn syndrome","type":"exact"},{"name":"chondrodysplasia calcificans metaphysealis","type":"exact"},{"name":"metaphyseal dysplasia","type":"broad"},{"name":"metaphyseal dysplasia Pyle type","type":"related"},{"name":"metaphyseal dysplasia, Pyle type","type":"exact"}],"termid":"MONDO:0009943","xrefs":{"Monarch":{"xref_id":"0009943"}}}


id: FYPO:0009035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of formamide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to formamide","synonyms":[{"name":"resistance to formamide during mitotic cell cycle","type":"related"},{"name":"resistance to formamide during vegetative growth","type":"exact"},{"name":"resistant to formamide","type":"exact"}],"termid":"FYPO:0009035"}


id: GO:2000698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"positively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"}


id: PR:P36597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nmt1 gene.","definition_xrefs":["UniProtKB:P36597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.02","synonyms":[{"name":"HMP-P synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nmt1","type":"exact"},{"name":"hydroxymethylpyrimidine phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"no message in thiamine protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine biosynthesis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine pyrimidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36597"}


id: PBO:0043414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated 5","termid":"PBO:0043414"}


id: GO:0035110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a leg are generated and organized. A leg is a limb on which an animal walks and stands.","definition_xrefs":["GOC:bf","ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete leg morphogenesis (obsolete GO:0035110)","synonyms":[{"name":"leg morphogenesis","type":"exact"}],"termid":"GO:0035110"}


id: PR:Q09875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gms2 gene.","definition_xrefs":["UniProtKB:Q09875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.12","synonyms":[{"name":"Spom972h-gms2","type":"exact"}],"termid":"PR:Q09875"}


id: MONDO:0020368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Axenfeld's anomaly is a rare congenital ocular defect caused by anterior segment dysgenesis and is characterized by anteriorly displaced Schwalbe's line and iris bands extending into the cornea. In contrast, Rieger's anomaly includes characteristic iris and pupil anomalies.","definition_xrefs":["Orphanet:98978"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete goniodysgenesis (obsolete MONDO:0020218)","termid":"MONDO:0020218"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Axenfeld anomaly","secondary_identifiers":["MedDRA:10058653","SCTID:204152008","UMLS:C0266548","MEDGEN:78611","icd11.foundation:1703498511","ICD9:743.44","GARD:16485"],"termid":"MONDO:0020368","xrefs":{"Monarch":{"xref_id":"0020368"}}}


id: PBO:0076805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 2","termid":"PBO:0076805"}


id: MONDO:0017289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pleuropulmonary blastoma","termid":"MONDO:0011014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fetal lung interstitial tumor","secondary_identifiers":["MEDGEN:1830091","NCIT:C190105","GARD:21118","UMLS:C5679952","Orphanet:284362"],"synonyms":[{"name":"FLIT","type":"exact"},{"name":"flit","type":"exact"},{"name":"immature interstitial mesenchymal tumor","type":"exact"},{"name":"immature interstitial mesenchymal tumour","type":"exact"}],"termid":"MONDO:0017289","xrefs":{"Monarch":{"xref_id":"0017289"}}}


id: MONDO:0020747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sitosterolemia","termid":"MONDO:0008863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sitosterolemia 1","secondary_identifiers":["OMIM:210250","MEDGEN:440869","UMLS:C2749759"],"synonyms":[{"name":"STSL1","type":"exact"},{"name":"sitosterolemia 1","type":"exact"}],"termid":"MONDO:0020747","xrefs":{"Monarch":{"xref_id":"0020747"}}}


id: FYPO:0002128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0002128"}


id: PBO:0058657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6785","termid":"PBO:0058657"}


id: PBO:0038671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 5","termid":"PBO:0038671"}


id: GO:0090649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["PMID:21525936","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-glucose deprivation","synonyms":[{"name":"response to OGD","type":"exact"}],"termid":"GO:0090649"}


id: PBO:0031510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0031510"}


id: MOD:00809
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O3-galactosylthreonine.","definition_xrefs":["PubMed:2673008","RESID:AA0401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"O-hexosylated threonine","termid":"MOD:01348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-galactosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(alpha-D-galactopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Gal) threonine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-galactosyl-L-threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O3-galactosylthreonine","type":"exact"},{"name":"OGalThr","type":"exact"}],"termid":"MOD:00809"}


id: PBO:0086519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; overlaps ORF YLR235C","termid":"PBO:0086519"}


id: MONDO:0004018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A carcinoma that involves the liver.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete liver carcinoma (obsolete MONDO:0004018)","termid":"MONDO:0004018","xrefs":{"Monarch":{"xref_id":"0004018"}}}


id: PBO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1 Interacting Protein","termid":"PBO:0000303"}


id: PBO:0068633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 13, pseudogene","termid":"PBO:0068633"}


id: MONDO:1011872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, non-human animal","secondary_identifiers":["OMIA:001292"],"termid":"MONDO:1011872","xrefs":{"Monarch":{"xref_id":"1011872"}}}


id: PBO:0074082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 53","termid":"PBO:0074082"}


id: GO:0070013
data:
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id: MONDO:0014822
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id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["GOC:jl","ISBN:0781718325","GOC:bf","UniProtKB-KW:KW-0945"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host process (obsolete GO:0019048)","secondary_identifiers":["VZ:886"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: GO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA guanine + 7-cyano-7-deazaguanine = tRNA 7-cyano-7-deazaguanine + guanine.","definition_xrefs":["PMID:16407303","PMID:7748953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0140101","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine tRNA-ribosyltransferase activity","synonyms":[{"name":"TgtA","type":"related"},{"name":"archaeal tRNA-guanine transglycosylase activity","type":"exact"},{"name":"archaeosine tRNA-ribosyltransferase activity","type":"exact"}],"termid":"GO:0043867"}


id: MONDO:1011969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dahlem dwarfism, non-human animal","secondary_identifiers":["OMIA:001998"],"termid":"MONDO:1011969","xrefs":{"Monarch":{"xref_id":"1011969"}}}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: MONDO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hardening of the kidney due to infiltration by fibrous connective tissue (fibrosis), usually caused by renovascular diseases or chronic hypertension. Nephrosclerosis leads to renal ischemia.","definition_xrefs":["MESH:D009400"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosclerosis","secondary_identifiers":["EFO:1000041","ICD9:587","MEDGEN:14330","icd11.foundation:1878591797","DOID:11664","UMLS:C0027719","SCTID:32916005"],"synonyms":[{"name":"renal sclerosis","type":"exact"}],"termid":"MONDO:0006044","xrefs":{"Monarch":{"xref_id":"0006044"}}}


id: PBO:0080939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel pseudogene 1","termid":"PBO:0080939"}


id: MONDO:1012360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal vacuolar disorder, non-human animal","termid":"MONDO:1011873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vacuolar disorder, dog","secondary_identifiers":["OMIA:001303-9615"],"termid":"MONDO:1012360","xrefs":{"Monarch":{"xref_id":"1012360"}}}


id: GO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric complex that catalyzes the pyrophosphate-dependent phosphorylation of D-fructose 6-phosphate into D-fructose 1,6-bisphosphate.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex","synonyms":[{"name":"PFK complex","type":"related"}],"termid":"GO:0010316"}


id: GO:0019002
data:
  {"annotated_genes":["SJAG_00044","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88345,115292],"is_not":false,"summary":null,"term":"GO:0019002"}]},"cv_name":"molecular_function","definition":"Binding to GMP, guanosine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GMP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019002","terms_by_termid":{"GO:0019002":null}}


id: PBO:0088593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1","termid":"PBO:0088593"}


id: PR:000027576
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(T3)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"hht1/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht1/Phos(T3)","type":"exact"}],"termid":"PR:000027576"}


id: PBO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 1","termid":"PBO:0048171"}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: PBO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing E1","termid":"PBO:0043980"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: PR:O94406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04959","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.14","secondary_identifiers":["UniProtKB:O94406"],"synonyms":[{"name":"Spom972h-PRPF18","type":"exact"}],"termid":"PR:O94406"}


id: PBO:0002884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin ligase E3 Ptr1","termid":"PBO:0002884"}


id: PBO:0064028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 62","termid":"PBO:0064028"}


id: GO:1990270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric protein complex consisting of two platelet-derived growth factor (PDGF) receptor subunits and two PDGF ligand subunits. Binding of the PDGF ligand dimer to the PDGF receptor in the plasma membrane induces receptor dimerization and activation. PDGFs are involved in a wide variety of signaling processes and are found in all vertebrates. At least two different receptor chains (A and B) and four types of ligand chains (A, B, C, and D) are known forming a wide variety of combinations of receptor-ligand complexes.","definition_xrefs":["GOC:bhm","PMID:11331882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-ligand complex","synonyms":[{"name":"PDGF complex","type":"broad"},{"name":"PDGF receptor-ligand complex","type":"exact"},{"name":"PDGF-AA-receptor alpha complex","type":"narrow"},{"name":"PDGF-AB-receptor alpha complex","type":"narrow"},{"name":"PDGF-AB-receptor beta complex","type":"narrow"},{"name":"PDGF-BB-receptor alpha complex","type":"narrow"},{"name":"PDGF-BB-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-BB-receptor beta complex","type":"narrow"},{"name":"PDGF-CC-receptor alpha complex","type":"narrow"},{"name":"PDGF-CC-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-CC-receptor beta complex","type":"narrow"},{"name":"PDGF-DD-receptor alpha-beta complex","type":"narrow"},{"name":"PDGF-DD-receptor beta complex","type":"narrow"},{"name":"receptor-ligand complex","type":"broad"}],"termid":"GO:1990270"}


id: PBO:0048124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 5","termid":"PBO:0048124"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["UniProtKB:G2TRM4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: MONDO:0007617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Coffin-Siris syndrome 1","secondary_identifiers":["GARD:15072","OMIM:135900","OMIM:614562","UMLS:C3281201","MEDGEN:482831","MESH:C538391","DOID:0070042","OMIM:609943"],"synonyms":[{"name":"ARID1B-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome","type":"related"},{"name":"COFFIN-SIRIS syndrome 1","type":"exact"},{"name":"CSS","type":"related"},{"name":"CSS1","type":"exact"},{"name":"Coffin-Siris syndrome 1","type":"exact"},{"name":"MRD12","type":"exact"},{"name":"autosomal dominant mental retardation 12","type":"exact"},{"name":"fifth digit syndrome","type":"broad"},{"name":"hypertrichosis, hyperkeratosis, intellectual disability, and distinctive facial features","type":"exact"},{"name":"hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features","type":"exact"},{"name":"intellectual disability, autosomal dominant 12","type":"exact"},{"name":"mental retardation, autosomal dominant 12","type":"related"},{"name":"mental retardation, autosomal dominant type 12","type":"exact"}],"termid":"MONDO:0007617","xrefs":{"Monarch":{"xref_id":"0007617"}}}


id: PR:P41878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01258","PANTHER:PTHR10410:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.13","secondary_identifiers":["UniProtKB:P41878"],"synonyms":[{"name":"Spom972h-PSMD14","type":"exact"},{"name":"protein pad1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41878"}


id: PR:O94488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule organizer protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.07c","synonyms":[{"name":"Spom972h-mto1","type":"exact"},{"name":"morphology defective protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94488"}


id: PBO:0072384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 10","termid":"PBO:0072384"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PBO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0034579"}


id: PBO:0039425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 5","termid":"PBO:0039425"}


id: GO:0033823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 5-(D-galactosyloxy)-L-lysine-procollagen = UDP + 1,2-D-glucosyl-5-D-(galactosyloxy)-L-lysine-procollagen.","definition_xrefs":["EC:2.4.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"procollagen glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1981157","RHEA:12576","MetaCyc:PROCOLLAGEN-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-collagenglucosyltransferase activity","type":"related"},{"name":"UDP-glucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:5-(D-galactosyloxy)-L-lysine-procollagen D-glucosyltransferase activity","type":"related"},{"name":"collagen glucosyltransferase activity","type":"related"},{"name":"collagen hydroxylysyl glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysine-glucosyltransferase activity","type":"related"},{"name":"galactosylhydroxylysyl glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-collagen glucosyltransferase activity","type":"related"}],"termid":"GO:0033823"}


id: MONDO:0006765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus fusobacterium.","definition_xrefs":["MESH:D005674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fusobacteriaceae infectious disease","termid":"MONDO:0006925"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacterium infectious disease","secondary_identifiers":["ICD9:041.84","MEDGEN:872278","SCTID:712657002","UMLS:C4039413","EFO:1000943"],"synonyms":[{"name":"Fusobacterium caused disease or disorder","type":"exact"},{"name":"Fusobacterium disease or disorder","type":"exact"},{"name":"infection caused by Fusobacterium","type":"related"},{"name":"infection due to Fusobacterium","type":"exact"}],"termid":"MONDO:0006765","xrefs":{"Monarch":{"xref_id":"0006765"}}}


id: GO:0021765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cingulate gyrus over time from its initial formation until its mature state. The cingulate gyrus is a ridge in the cerebral cortex located dorsal to the corpus callosum.","definition_xrefs":["ISBN:0878937420","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cingulate gyrus development","termid":"GO:0021765"}


id: FYPO:0004883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is abnormal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle midzone","synonyms":[{"name":"abnormal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"abnormal protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004883"}


id: PBO:0116303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of G1 transcription; binds to SCB binding factor (SBF) at SCB target promoters in early G1; phosphorylation of Whi5p by G1 cyclin (Cln)/Cdc28p relieves repression and promoter binding by Whi5p, drives nuclear export, and contributes to both the determination of critical cell size at START and cell fate; dephosphorylated and re-imported into the nucleus post-START during the starvation response, reversing commitment; expression is repressed in M/early G phase; analogous to metazoan Rb","termid":"PBO:0116303"}


id: MONDO:0014108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the ERCC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005046","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Fanconi anemia complementation group Q","secondary_identifiers":["DOID:0111093","MEDGEN:815318","OMIM:615272","GARD:15934","UMLS:C3808988"],"synonyms":[{"name":"ERCC4 Fanconi anaemia","type":"exact"},{"name":"ERCC4 Fanconi anemia","type":"exact"},{"name":"FANCQ","type":"exact"},{"name":"Fanconi Anemia, complementation group type Q","type":"exact"},{"name":"Fanconi anaemia caused by mutation in ERCC4","type":"exact"},{"name":"Fanconi anaemia complementation group type Q","type":"exact"},{"name":"Fanconi anemia caused by mutation in ERCC4","type":"exact"},{"name":"Fanconi anemia complementation group type Q","type":"exact"},{"name":"Fanconi anemia, complementation group Q","type":"related"}],"termid":"MONDO:0014108","xrefs":{"Monarch":{"xref_id":"0014108"}}}


id: MOD:00165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 1'-mannosyl-L-tryptophan.","definition_xrefs":["RESID:AA0156","PubMed:1482345","PubMed:16150691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"1'-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"1'-glycosyl-L-tryptophan","type":"exact"},{"name":"1'-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD N-linked (Man) tryptophan","type":"exact"},{"name":"N-mannosyl-tryptophan","type":"exact"},{"name":"N1'ManTrp","type":"exact"},{"name":"N1-mannosyl-tryptophan","type":"exact"}],"termid":"MOD:00165"}


id: GO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyadenosine deaminase reaction (obsolete GO:0006158)","synonyms":[{"name":"deoxyadenosine deaminase reaction","type":"exact"}],"termid":"GO:0006158"}


id: GO:1905474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in stem cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","GOC:bc","PMID:25640183","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in stem cell proliferation (obsolete GO:1905474)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in stem cell proliferation","type":"narrow"}],"termid":"GO:1905474"}


id: MONDO:0006960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease or damage involving the SCIATIC NERVE, which divides into the PERONEAL NERVE and TIBIAL NERVE (see also PERONEAL NEUROPATHIES and TIBIAL NEUROPATHY). Clinical manifestations may include SCIATICA or pain localized to the hip, PARESIS or PARALYSIS of posterior thigh muscles and muscles innervated by the peroneal and tibial nerves, and sensory loss involving the lateral and posterior thigh, posterior and lateral leg, and sole of the foot. The sciatic nerve may be affected by trauma; ISCHEMIA; COLLAGEN DISEASES; and other conditions. (From Adams et al., Principles of Neurology, 6th ed, p1363)","definition_xrefs":["MESH:D020426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lesion of sciatic nerve","termid":"MONDO:0001543"},{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sciatic neuropathy","secondary_identifiers":["UMLS:C0149940","EFO:1001166","MedDRA:10048950","MEDGEN:57705","DOID:11446","SCTID:52585001"],"termid":"MONDO:0006960","xrefs":{"Monarch":{"xref_id":"0006960"}}}


id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: PR:O14063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.03c","synonyms":[{"name":"Spom972h-cut15","type":"exact"},{"name":"cell untimely torn protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine-rich RNA polymerase I suppressor protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14063"}


id: PBO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0003170"}


id: GO:0046648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell proliferation","synonyms":[{"name":"activation of gamma-delta T cell proliferation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of gamma-delta T cell proliferation","type":"narrow"},{"name":"up regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"up-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"upregulation of gamma-delta T cell proliferation","type":"exact"}],"termid":"GO:0046648"}


id: PBO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transporter Mmt1 (predicted)","termid":"PBO:0016580"}


id: PBO:0083945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyltranspeptidase; major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation","termid":"PBO:0083945"}


id: GO:0015454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Active transport of an ion across a membrane, driven by light.","definition_xrefs":["GOC:mtg_transport","PMID:23994288","PMID:26442282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"light-driven active monoatomic ion transmembrane transporter activity","secondary_identifiers":["TC:3.E"],"synonyms":[{"name":"light absorption-driven transporter","type":"exact"},{"name":"light-driven active ion transmembrane transporter activity","type":"broad"},{"name":"light-driven active transmembrane transporter activity","type":"related"},{"name":"light-driven pumps","type":"exact"}],"termid":"GO:0015454"}


id: PBO:0090689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Cut15","termid":"PBO:0090689"}


id: MONDO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia in which the red blood cell volume is decreased.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"microcytic anemia","secondary_identifiers":["MEDGEN:1673948","SCTID:234349007","UMLS:C5194182","icd11.foundation:1380406043","NCIT:C35141","HP:0001935","DOID:11252"],"termid":"MONDO:0001245","xrefs":{"Monarch":{"xref_id":"0001245"}}}


id: GO:1902387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ceramide 1-phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23863933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"ceramide binding","termid":"GO:0097001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"ceramide 1-phosphate binding","termid":"GO:1902387"}


id: PBO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces only","termid":"PBO:0014570"}


id: PBO:0085740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription termination by RNA polymerase II; interacts with exonuclease Rat1p and Rai1p; has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition","termid":"PBO:0085740"}


id: MONDO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A nail anomaly that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","secondary_identifiers":["Orphanet:79370"],"synonyms":[{"name":"syndrome associated with nail anomaly","type":"exact"},{"name":"syndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019285","xrefs":{"Monarch":{"xref_id":"0019285"}}}


id: GO:1900182
data:
  {"annotated_genes":["SJAG_03453","SJAG_03048","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101912,93852,90315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localisation to nucleus","type":"narrow"},{"name":"activation of protein localization in cell nucleus","type":"narrow"},{"name":"activation of protein localization in nucleus","type":"exact"},{"name":"activation of protein localization to nucleus","type":"narrow"},{"name":"positive regulation of protein localisation to nucleus","type":"exact"},{"name":"positive regulation of protein localization in cell nucleus","type":"exact"},{"name":"positive regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localisation to nucleus","type":"exact"},{"name":"up regulation of protein localization in cell nucleus","type":"exact"},{"name":"up regulation of protein localization in nucleus","type":"exact"},{"name":"up regulation of protein localization to nucleus","type":"exact"},{"name":"up-regulation of protein localisation to nucleus","type":"exact"},{"name":"up-regulation of protein localization in cell nucleus","type":"exact"},{"name":"up-regulation of protein localization in nucleus","type":"exact"},{"name":"up-regulation of protein localization to nucleus","type":"exact"},{"name":"upregulation of protein localisation to nucleus","type":"exact"},{"name":"upregulation of protein localization in cell nucleus","type":"exact"},{"name":"upregulation of protein localization in nucleus","type":"exact"},{"name":"upregulation of protein localization to nucleus","type":"exact"}],"termid":"GO:1900182","terms_by_termid":{"GO:0042307":null}}


id: MONDO:0007588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extrasystoles-short stature-hyperpigmentation-microcephaly syndrome is a rare, genetic, malformation syndrome with short stature characterized by microcephaly, borderline intellectual disability, hyperpigmentation of the skin, short stature, and ventricular extrasystoles. Cardiac syncope may also be associated. There have been no further descriptions in the literature since 1975.","definition_xrefs":["Orphanet:1964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"extrasystoles-short stature-hyperpigmentation-microcephaly syndrome","secondary_identifiers":["OMIM:133750","MESH:C565032","MEDGEN:343564","GARD:2213","UMLS:C1851412"],"synonyms":[{"name":"Char-Douglas-Dungan syndrome","type":"exact"},{"name":"extrasystoles, multiform ventricular, with short stature, hyperpigmentation and microcephaly","type":"related"}],"termid":"MONDO:0007588","xrefs":{"Monarch":{"xref_id":"0007588"}}}


id: PBO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Sds22","termid":"PBO:0001618"}


id: PBO:0065737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain containing serine/threonine kinase like","termid":"PBO:0065737"}


id: PBO:0057543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 659","termid":"PBO:0057543"}


id: PBO:0085899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress","termid":"PBO:0085899"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_02532","SJAG_05229","SJAG_02877","SJAG_02019","SJAG_05342","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95178],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[103295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[91881,99141,113521,91823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: PBO:0057103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 195","termid":"PBO:0057103"}


id: PBO:0068621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 1","termid":"PBO:0068621"}


id: GO:1905865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GOC:autophagy","GOC:mf","PMID:26567215","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"negatively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"down regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"down-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"downregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"downregulation of Atg1p signalling complex formation","type":"exact"},{"name":"downregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"inhibition of ATG1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of Atg1p signalling complex assembly","type":"narrow"},{"name":"inhibition of Atg1p signalling complex formation","type":"narrow"},{"name":"inhibition of ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"negative regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"negative regulation of ATG1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"negative regulation of Atg1p signalling complex formation","type":"exact"},{"name":"negative regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905865"}


id: GO:0035036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the sperm plasma membrane and outer layer of the egg during fertilization.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm-egg recognition","secondary_identifiers":["Reactome:R-HSA-2534343","Reactome:R-HSA-1300642"],"termid":"GO:0035036"}


id: GO:1905532
data:
  {"annotated_genes":["SJAG_05346","SJAG_03970","SJAG_00991","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[98387,91220,92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10467003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903128"],"synonyms":[{"name":"regulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905532","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PR:Q96WW2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug93 gene.","definition_xrefs":["UniProtKB:Q96WW2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 93 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.06","synonyms":[{"name":"Spom972h-mug93","type":"exact"}],"termid":"PR:Q96WW2"}


id: PBO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endocytosis_during_vegetative_growth","termid":"PBO:0031780"}


id: PBO:0036162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_prophase","termid":"PBO:0036162"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: GO:0038202
data:
  {"annotated_genes":["SJAG_01032","SJAG_04394","SJAG_00824","SJAG_03072","SJAG_03709","SJAG_03678","SJAG_03928","SJAG_01509","SJAG_02765","SJAG_04910","SJAG_02231","SJAG_03371","SJAG_01187","SJAG_01047","SJAG_01320","SJAG_00209","SJAG_00169","SJAG_04249","SJAG_03089","SJAG_02605","SJAG_05346","SJAG_01142","SJAG_03355","SJAG_02426","SJAG_01983","SJAG_00457","SJAG_04496","SJAG_00875","SJAG_03501","SJAG_03799","SJAG_03974","SJAG_03405","SJAG_02424","SJAG_02723","SJAG_00991","SJAG_00561","SJAG_01184","SJAG_03486","SJAG_01703","SJAG_04235","SJAG_00688","SJAG_00167","SJAG_02389","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61382,67140,77373,81315,98062,106212,106237,112613,114527],"is_not":false,"summary":null,"term":"GO:0038202"},{"annotations":[98384,75416,92803,108838,112748,115731,81709,117848,104677,116651,95595,100979,87472,102540,109245,116087,113572,117655,75309,99083,114175,106702,62862],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[95596,110116,74294,112451,78215,78554,77164,75762,77675,93797,87765],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[117406,115084,107404,92370,93531],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"A series of intracellular molecular signals mediated by TORC1; TOR (target of rapamycin) in complex with at least Raptor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01047":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02605":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03709":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_03974":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04394":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"TORC1 signal transduction","type":"exact"}],"termid":"GO:0038202","terms_by_termid":{"GO:0038202":null,"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: MONDO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iniencephaly","termid":"MONDO:0018968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"open iniencephaly","secondary_identifiers":["UMLS:C0431285","GARD:20949","icd11.foundation:1778329323","MEDGEN:608900","Orphanet:268363","SCTID:203928008"],"termid":"MONDO:0017060","xrefs":{"Monarch":{"xref_id":"0017060"}}}


id: PBO:0039971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 2","termid":"PBO:0039971"}


id: PR:Q10326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug8 gene.","definition_xrefs":["UniProtKB:Q10326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 8 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.01","synonyms":[{"name":"Spom972h-mug8","type":"exact"}],"termid":"PR:Q10326"}


id: MONDO:0006226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade, indolent B-cell lymphoma, usually associated with Helicobacter pylori infection. Morphologically it is characterized by a dense mucosal atypical lymphocytic (centrocyte-like cell) infiltrate with often prominent lymphoepithelial lesions and plasmacytic differentiation. Approximately 40% of gastric MALT lymphomas carry the t(11;18)(q21;q21). Such cases are resistant to Helicobacter pylori therapy.","definition_xrefs":["NCIT:C5266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"},{"relation_name":"is_a","term_name":"hereditary gastric cancer","termid":"MONDO:0018502"},{"relation_name":"is_a","term_name":"gastric non-hodgkin lymphoma","termid":"MONDO:0042493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"gastric mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["UMLS:C1333782","MEDGEN:232547","EFO:1000274"],"synonyms":[{"name":"MALT lymphoma of stomach","type":"exact"},{"name":"MALT lymphoma of the stomach","type":"exact"},{"name":"MALToma of stomach","type":"exact"},{"name":"MALToma of the stomach","type":"exact"},{"name":"gastric MALT lymphoma","type":"exact"},{"name":"gastric MALToma","type":"exact"},{"name":"gastric mucosa-associated lymphoid tissue lymphoma","type":"exact"},{"name":"primary MALT lymphoma of stomach","type":"exact"},{"name":"primary MALT lymphoma of the stomach","type":"exact"},{"name":"primary gastric B-cell MALT lymphoma","type":"exact"},{"name":"primary gastric MALT lymphoma","type":"exact"},{"name":"stomach MALT lymphoma","type":"exact"}],"termid":"MONDO:0006226","xrefs":{"Monarch":{"xref_id":"0006226"}}}


id: MONDO:1040024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A demyelinating disease of the central nervous system characterized by the presence of a demyelinating event (optic neuritis, myelitis, acute/multiphasic encephalomyelitis, cerebral or polyfocal deficits, brainstem or cerebellar deficits, and/or cerebral cortical encephalitis), a positive myelin oligodendrocyte glycorotein-IgG test, and exclusion of an alternative diagnosis like MS.","definition_xrefs":["PMID:37789888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease of central nervous system","termid":"MONDO:0020800"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein antibody-associated disease","secondary_identifiers":["UMLS:C5554054","MEDGEN:1813985"],"termid":"MONDO:1040024","xrefs":{"Monarch":{"xref_id":"1040024"}}}


id: GO:0090263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway","termid":"GO:0060828"},{"relation_name":"positively_regulates","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of canonical Wnt signaling pathway","secondary_identifiers":["GO:0035413","Reactome:R-HSA-4641257"],"synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of catenin import into nucleus","type":"narrow"},{"name":"positive regulation of catenin protein nuclear translocation","type":"narrow"}],"termid":"GO:0090263"}


id: GO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the basilar pons through the medullary pyramid in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dgh","GO_REF:0000021","PMID:9878731","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the medullary pyramid","synonyms":[{"name":"corticospinal neuron axon pathfinding through the medullary pyramid","type":"exact"}],"termid":"GO:0021971"}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11734","EC:1.3.8.7"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: MONDO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation type II (obsolete MONDO:0035541)","secondary_identifiers":["Orphanet:573253"],"termid":"MONDO:0035541","xrefs":{"Monarch":{"xref_id":"0035541"}}}


id: PBO:0052247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 16","termid":"PBO:0052247"}


id: PBO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A23","termid":"PBO:0047020"}


id: PBO:0090932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg2","termid":"PBO:0090932"}


id: PBO:0074002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 3","termid":"PBO:0074002"}


id: MONDO:0019903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 2 syndrome is a rare chromosomal anomaly syndrome with highly variable phenotype principally characterized by intrauterine growth retardation, failure to thrive, developmental delay, hypotonia, mild dysmorphic features (incl. microcephaly, short forehead, upslanting palpebral fissures, hypertelorism, epicanthal folds, wide nasal bridge, broad nasal tip, long philtrum, thin upper lip, micrognathia, short neck), skeletal anomalies (e.g. kyphosis, brachydactyly, clinodactyly, talipes equinovarus) and dermatological features (i.e. café-au-lait spots). Patients may also present ventriculoseptal defects and genital abnormalities (e.g. genital hypoplasia, phimosis, cryptorchidism).","definition_xrefs":["Orphanet:96171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 2","secondary_identifiers":["NCIT:C121981","SCTID:765485000","UMLS:C4707448","GARD:10837","MEDGEN:1642621"],"synonyms":[{"name":"R2","type":"related"},{"name":"Ring 2","type":"related"},{"name":"Ring chromosome 2 syndrome","type":"related"},{"name":"Ring chromosome type 2","type":"exact"},{"name":"chromosome 2 ring","type":"related"},{"name":"rose cluster 2","type":"exact"}],"termid":"MONDO:0019903","xrefs":{"Monarch":{"xref_id":"0019903"}}}


id: PBO:0088821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein Phf1","termid":"PBO:0088821"}


id: PBO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3 (predicted)","termid":"PBO:0000704"}


id: MONDO:0012191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatoencephalopathy due to combined oxidative phosphorylation deficiency type 1 is a rare, inherited mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by intrauterine growth retardation, metabolic decompensation with recurrent vomiting, persistent severe lactic acidosis, encephalopathy, seizures, failure to thrive, severe global developmental delay, poor eye contact, severe muscular hypotonia or axial hypotonia with limb hypertonia, hepatomegaly and/or liver dysfunction and/or liver failure, leading to fatal outcome in severe cases. Neuroimaging abnormalities may include corpus callosum thinning, leukodystrophy, delayed myelination and basal ganglia involvement.","definition_xrefs":["Orphanet:137681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","secondary_identifiers":["DOID:0111474","OMIM:609060","UMLS:C1836797","MESH:C563797","NCIT:C125663","GARD:16949","SCTID:764962002","MEDGEN:322999"],"synonyms":[{"name":"COXPD1","type":"related"},{"name":"GFM1 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"Hepatoencephalopathy due to COXPD1","type":"exact"},{"name":"Hepatoencephalopathy, early fatal progressive","type":"related"},{"name":"combined oxidative phosphorylation deficiency 1","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in GFM1","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 1","type":"exact"},{"name":"hepatoencephalopathy due to combined oxidative phosphorylation defect type 1","type":"exact"}],"termid":"MONDO:0012191","xrefs":{"Monarch":{"xref_id":"0012191"}}}


