# terms

id: GO:0102836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:7948918"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity (obsolete GO:0102836)","termid":"GO:0102836"}


id: SO:0000720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is foreign.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign_transposable_element","synonyms":[{"name":"foreign transposable element","type":"exact"}],"termid":"SO:0000720"}


id: PATO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000430 unique (obsolete PATO:0000430)","termid":"PATO:0000430"}


id: MONDO:0011050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly - cardiac defect - lung malsegmentation syndrome is a very rare syndrome characterized by the combination of microcephaly, heart defects, renal hypoplasia, lung segmentation defects and cleft palate.","definition_xrefs":["Orphanet:2516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"microcephaly-cardiac defect-lung malsegmentation syndrome","secondary_identifiers":["GARD:2098","MEDGEN:371329","OMIM:601355","SCTID:719379001","UMLS:C1832436","MESH:C563341"],"synonyms":[{"name":"Ellis Yale Winter syndrome","type":"related"},{"name":"Ellis-Yale-Winter syndrome","type":"exact"},{"name":"microcephaly, congenital heart disease, lung segmentation defects and unilateral renal agenesis","type":"related"},{"name":"microcephaly, congenital heart disease, unilateral renal agenesis, and hyposegmented lungs","type":"related"}],"termid":"MONDO:0011050","xrefs":{"Monarch":{"xref_id":"0011050"}}}


id: GO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the first transesterification reaction of U2-type spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, which is still joined to the 3' exon. The catalytic site is thought to be formed by U6 and/or U2 snRNA, and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete first U2-type spliceosomal transesterification activity (obsolete GO:0000362)","synonyms":[{"name":"first U2-type spliceosomal transesterification activity","type":"exact"},{"name":"lariat formation, 5'-splice site cleavage","type":"broad"}],"termid":"GO:0000362"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: PBO:0116323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family Efn2","termid":"PBO:0116323"}


id: GO:0007374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a cup-shaped invagination at the posterior end of the embryo, bringing the posterior midgut and hindgut primordia into the interior.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior midgut invagination","termid":"GO:0007374"}


id: GO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of double-stranded RNAs into 20 to 30-nucleotide products. These products typically associate to the RNA-induced silencing complex and serve as guide RNAs for posttranslational RNA interference.","definition_xrefs":["PMID:15242644"],"gene_count":0,"genotype_count":0,"name":"obsolete bidentate ribonuclease III activity (obsolete GO:0016443)","synonyms":[{"name":"bidentate RNase III activity","type":"exact"}],"termid":"GO:0016443"}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: PBO:0085546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for assembly and maturation of pre-40 S particles; homologous to mammalian ribosomal protein S19, no bacterial homolog; mutations in human RPS19 are associated with Diamond Blackfan anemia; RPS19A has a paralog, RPS19B, that arose from the whole genome duplication","termid":"PBO:0085546"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0065650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type C associated protein","termid":"PBO:0065650"}


id: GO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-aspartic acid 1-amide by hydrolysis and oxidation of an interior Asp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0084"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-aspartic acid amidation (obsolete GO:0018037)","termid":"GO:0018037"}


id: PBO:0089272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm8","termid":"PBO:0089272"}


id: GO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"negatively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell apoptotic process","synonyms":[{"name":"down regulation of T cell apoptosis","type":"exact"},{"name":"down-regulation of T cell apoptosis","type":"exact"},{"name":"downregulation of T cell apoptosis","type":"exact"},{"name":"inhibition of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of T-cell apoptosis","type":"exact"},{"name":"negative regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070233"}


id: PR:O43088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rba50 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II-associated protein rba50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.13","synonyms":[{"name":"Spom972h-rba50","type":"exact"}],"termid":"PR:O43088"}


id: PBO:0062530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily V member 1 pseudogene","termid":"PBO:0062530"}


id: MONDO:0018537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinoma of the gallbladder and extrahepatic biliary tract is a rare hepatic and biliary tract tumor, arising either in the gallbladder itself or in the epithelium lining the extrahepatic biliary tree, the cystic duct and peribiliary glands. It is characterized by a substantial keratinization with abundant keratohyalin pearls and central deposition of dense keratin material within infiltrative nests and locally aggressive nature. In the early stages of the disease symptoms are vague and nonspecific (abdominal pain, jaundice and vomiting). In the advanced stages it may present with a bulky tumor and symptoms of adjacent organ involvement.","definition_xrefs":["Orphanet:424996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct squamous cell carcinoma","termid":"MONDO:0006203"},{"relation_name":"is_a","term_name":"carcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of gallbladder and extrahepatic biliary tract","secondary_identifiers":["SCTID:766978002","GARD:21792","UMLS:C4707898","MEDGEN:1635098"],"synonyms":[{"name":"squamous cell carcinoma of gallblader and EBT","type":"exact"}],"termid":"MONDO:0018537","xrefs":{"Monarch":{"xref_id":"0018537"}}}


id: MONDO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GUCY2D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"GUCY2D-related recessive retinopathy","termid":"MONDO:0100453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 1","secondary_identifiers":["DOID:0110078","GARD:635","UMLS:C2931258","ICD10CM:H35.5","MEDGEN:419026","OMIM:204000"],"synonyms":[{"name":"CRB","type":"related"},{"name":"GUCY2D Leber congenital amaurosis","type":"exact"},{"name":"LCA","type":"related"},{"name":"LCA1","type":"exact"},{"name":"Leber congenital amaurosis 1","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GUCY2D","type":"exact"},{"name":"Leber congenital amaurosis type 1","type":"exact"},{"name":"amaurosis congenita of Leber 1","type":"related"},{"name":"amaurosis congenita of Leber I","type":"exact"},{"name":"amaurosis congenita of Leber, type 1","type":"related"},{"name":"retinal blindness, congenital","type":"related"}],"termid":"MONDO:0008764","xrefs":{"Monarch":{"xref_id":"0008764"}}}


id: GO:1900548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["PMID:28352909","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme B metabolic process","termid":"GO:0046492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme B catabolic process","secondary_identifiers":["MetaCyc:PWY-5874"],"synonyms":[{"name":"heme B breakdown","type":"exact"},{"name":"heme B catabolism","type":"exact"},{"name":"heme B degradation","type":"exact"},{"name":"protoheme catabolic process","type":"exact"},{"name":"protoheme degradation","type":"exact"}],"termid":"GO:1900548"}


id: GO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a tapetal cell of anthers in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"anther wall tapetum cell differentiation","termid":"GO:0048657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell fate specification","synonyms":[{"name":"tapetal cell fate specification","type":"broad"}],"termid":"GO:0010234"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: GO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = D-lysine.","definition_xrefs":["EC:5.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lysine racemase activity","secondary_identifiers":["RHEA:22864","MetaCyc:LYSINE-RACEMASE-RXN"],"termid":"GO:0018113"}


id: MOD:01355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01355"}


id: PBO:0045700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type family member 5","termid":"PBO:0045700"}


id: MONDO:0007870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labia minora, incomplete adhesion of","secondary_identifiers":["UMLS:C1835613","MEDGEN:372090","OMIM:149600"],"synonyms":[{"name":"labia minora, incomplete adhesion of","type":"exact"}],"termid":"MONDO:0007870","xrefs":{"Monarch":{"xref_id":"0007870"}}}


id: PATO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000869 prepulse inhibition value (obsolete PATO:0000869)","termid":"PATO:0000869"}


id: PBO:0003289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus (SURF40 family)","termid":"PBO:0003289"}


id: GO:0060681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}


id: GO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that is synthesized only under certain specific growth conditions and receives electrons from the oxidation of specific substrates, e.g. trimethylamine, carnitine and in nitrogen fixation.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group II (obsolete GO:0015041)","synonyms":[{"name":"electron transfer flavoprotein, group II","type":"exact"}],"termid":"GO:0015041"}


id: GO:0097526
data:
  {"annotated_genes":["SJAG_00531","SJAG_03469","SJAG_03070","SJAG_00414","SJAG_05240","SJAG_01819","SJAG_00643","SJAG_04497","SJAG_00147","SJAG_01327","SJAG_02455","SJAG_04538","SJAG_02469","SJAG_03460","SJAG_01870","SJAG_04529","SJAG_04433","SJAG_04222","SJAG_03954","SJAG_00989","SJAG_04405","SJAG_02295","SJAG_03410","SJAG_02304","SJAG_01308","SJAG_02279","SJAG_01634","SJAG_03369","SJAG_01301","SJAG_02843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80165,97517,72227,78177,81768,114461,79143,64154,110719,76059,81124,108096,105424,110201,79114,77463,94676,72530,116004,105379,79431,92589,80675,73389,74444,109638,62910,80282,79347,100149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4/U6 (or U4atac/U6atac) snRNP with the U5 snRNP.","definition_xrefs":["GOC:krc","GOC:pr","ISBN:0879695897","PMID:9452384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"spliceosomal tri-snRNP complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0097526","terms_by_termid":{"GO:0046540":null}}


id: GO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter metabolic process (obsolete GO:0042133)","synonyms":[{"name":"neurotransmitter metabolism","type":"exact"}],"termid":"GO:0042133"}


id: MONDO:0036976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells. It is characterized by the absence of morphologic features associated with malignancy (severe cytologic atypia, tumor cell necrosis, and high mitotic rate). Benign epithelial neoplasms remain confined to the original site of growth and only rarely metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign epithelial neoplasm","secondary_identifiers":["ICDO:8011/0","ICDO:8010/0","MEDGEN:90747","UMLS:C0334232"],"synonyms":[{"name":"benign epithelial neoplasm","type":"exact"},{"name":"benign epithelial tumor","type":"exact"},{"name":"benign epithelial tumour","type":"exact"},{"name":"benign epithelioma","type":"exact"},{"name":"benign neoplasm of epithelium","type":"exact"},{"name":"benign neoplasm of the epithelium","type":"exact"},{"name":"benign tumor of epithelium","type":"exact"},{"name":"benign tumor of the epithelium","type":"exact"},{"name":"benign tumour of epithelium","type":"exact"},{"name":"benign tumour of the epithelium","type":"exact"},{"name":"epithelial neoplasm, benign","type":"exact"},{"name":"epithelioma, benign","type":"exact"}],"termid":"MONDO:0036976","xrefs":{"Monarch":{"xref_id":"0036976"}}}


id: GO:0032093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes.","definition_xrefs":["GOC:mcc","PMID:16337230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"SAM domain binding","synonyms":[{"name":"Sterile Alpha Motif domain binding","type":"exact"}],"termid":"GO:0032093"}


id: PBO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr10","termid":"PBO:0036375"}


id: SO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is retained with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_normal","synonyms":[{"name":"function retained variant","type":"exact"},{"name":"function_retained_variant","type":"related"},{"name":"functionally normal","type":"related"}],"termid":"SO:0002219"}


id: FYECO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lysine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lys","synonyms":[{"name":"lysine added","type":"exact"}],"termid":"FYECO:0000199"}


id: PBO:0084155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity S-methylmethionine permease; required for utilization of S-methylmethionine as a sulfur source; has similarity to S-adenosylmethionine permease Sam3p","termid":"PBO:0084155"}


id: MONDO:0013858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontine tegmental cap dysplasia (PTCD) is a non-progressive neurological disorder characterized by significant developmental delay, cranial nerve dysfunction, and malformation of the hindbrain.Individuals with PTCD may have a collection of medical and developmental problems including: hearing impairment, ataxia,language and speech disorders, feeding and swallowingdifficulties, heartmalformations and facial paralysis.The severity of themedical problems varies among patients. Some patients have a good long-term prognosiswith normal intelligence and partial speech. The cause of PTCD has not been identified. Treatment is focused on managing the underlying symptoms and may include interventions such as cochlear implantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontine tegmental cap dysplasia","secondary_identifiers":["OMIM:614688","MEDGEN:762040","GARD:10919","Orphanet:269229","UMLS:C3541340"],"synonyms":[{"name":"PONTINE tegmental CAP dysplasia","type":"related"},{"name":"PTCD","type":"exact"},{"name":"pontine tegmental cap dysplasia","type":"exact"}],"termid":"MONDO:0013858","xrefs":{"Monarch":{"xref_id":"0013858"}}}


id: PBO:0055508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2942","termid":"PBO:0055508"}


id: PBO:0089788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis WD repeat WDR12/Ytm1 protein","termid":"PBO:0089788"}


id: GO:0099580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ion antiporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic ion antiporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ion antiporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ion antiporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099580"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: MONDO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that results from defective IL7R expression causes T-B+NK+ SCID. Loss of IL-7R function leads to the loss of an antiapoptotic signal, resulting in a loss of T-cell selection in thymus.","definition_xrefs":["DOID:0060015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to IL-7Ralpha deficiency","secondary_identifiers":["MEDGEN:1842915","GARD:17051","Orphanet:169154","UMLS:C5679577"],"synonyms":[{"name":"IL-7R","type":"exact"},{"name":"IL-7Ralpha deficiency","type":"exact"},{"name":"T-B+ SCID due to IL-7Ralpha deficiency","type":"exact"},{"name":"interleukin-7 receptor alpha deficiency","type":"related"}],"termid":"MONDO:0015701","xrefs":{"Monarch":{"xref_id":"0015701"}}}


id: GO:0044080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a cGMP-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host cGMP-mediated signal transduction (obsolete GO:0044080)","synonyms":[{"name":"modulation by symbiont of host cGMP-mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host cGMP-mediated signal transduction pathway","type":"exact"},{"name":"modulation by symbiont of host cGMP-mediated signaling","type":"exact"},{"name":"modulation by symbiont of host cGMP-mediated signalling","type":"exact"},{"name":"modulation of host cGMP-mediated signal transduction by symbiont","type":"exact"},{"name":"perturbation of host cGMP-mediated signal transduction","type":"exact"},{"name":"regulation by symbiont of host cGMP-mediated signal transduction","type":"exact"}],"termid":"GO:0044080"}


id: MONDO:1011189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal stenosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis, non-human animal","termid":"MONDO:1010303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis, dog","secondary_identifiers":["OMIA:000947-9615"],"termid":"MONDO:1011189","xrefs":{"Monarch":{"xref_id":"1011189"}}}


id: FYPO:0001891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PMID:22558440","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"increased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of middle meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0001891"}


id: MONDO:0008481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis, cervical","secondary_identifiers":["SCTID:387800004","UMLS:C1384641","MEDGEN:235174","EFO:0009610","OMIM:184300"],"synonyms":[{"name":"spondylosis, cervical","type":"exact"}],"termid":"MONDO:0008481","xrefs":{"Monarch":{"xref_id":"0008481"}}}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_03333","SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78182,81035],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03333":null,"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-16761","Reactome:R-HSA-9694793","Reactome:R-HSA-446209","EC:2.4.99.18"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: PBO:0052178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 9","termid":"PBO:0052178"}


id: PBO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component Yox1","termid":"PBO:0003704"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: GO:0047424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + methylenediurea = CO2 + 2 NH3 + N-hydroxymethylurea.","definition_xrefs":["RHEA:15929","EC:3.5.3.21","MetaCyc:3.5.3.21-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"methylenediurea deaminase activity","synonyms":[{"name":"methylenediurea aminohydrolase activity","type":"related"},{"name":"methylenediurease activity","type":"related"}],"termid":"GO:0047424"}


id: PBO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase interaction types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_physically","termid":"PBO:0000038"}


id: MONDO:0020784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 1 (obsolete MONDO:0020784)","secondary_identifiers":["OMIM:612975"],"synonyms":[{"name":"FNSS1","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 1","type":"related"},{"name":"Short Sleep Phenotype","type":"related"},{"name":"short sleep, familial natural, 1","type":"exact"}],"termid":"MONDO:0020784","xrefs":{"Monarch":{"xref_id":"0020784"}}}


id: PBO:0034321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transitively_provides_input_for","termid":"PBO:0034321"}


id: MONDO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy due to drug","secondary_identifiers":["MEDGEN:509649","DOID:14184","ICD9:357.6","SCTID:7339009","UMLS:C0154762"],"termid":"MONDO:0001904","xrefs":{"Monarch":{"xref_id":"0001904"}}}


id: FYPO:0007719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abolished.","definition_xrefs":["PMID:33754639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished SMN complex assembly","synonyms":[{"name":"SMN complex assembly abolished","type":"exact"},{"name":"abolished SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007719"}


id: PR:Q9UTK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal long morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.04c","synonyms":[{"name":"Sp8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alm1","type":"exact"}],"termid":"PR:Q9UTK5"}


id: GO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0036129)","termid":"GO:0036129"}


id: GO:0031943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of glucocorticoid metabolic process","synonyms":[{"name":"regulation of glucocorticoid metabolism","type":"exact"}],"termid":"GO:0031943"}


id: PBO:0056875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence E (pseudogene)","termid":"PBO:0056875"}


id: PBO:0040339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 5","termid":"PBO:0040339"}


id: PBO:0080300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 64 pseudogene","termid":"PBO:0080300"}


id: MONDO:0100157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of megaloblastic anemia associated with decreased serum vitamin B12 (cobalamin, Cbl) in infancy or early childhood. Low molecular weight (LMW) proteinuria is frequently present, but usually occurs later and is usually mild or subclinical. Patients often present with vague symptoms, including failure to thrive, loss of appetite, fatigue, lethargy, and/or recurrent infections. Treatment with vitamin B12 results in sustained clinical improvement of the anemia. The proteinuria is nonprogressive, and affected individuals do not have deterioration of kidney function; correct diagnosis is important to prevent unnecessary treatment. The disorder results from a combination of vitamin B12 deficiency due to selective malabsorption of the vitamin, and impaired reabsorption of LMW proteins in the proximal renal tubule. These defects are caused by disruption of the AMN/CUBN complex that forms the 'cubam' receptor responsible for intestinal uptake of B12/GIF (CBLIF).","definition_xrefs":["OMIM:618882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Imerslund-Grasbeck syndrome","termid":"MONDO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome type 2","secondary_identifiers":["MEDGEN:865385","UMLS:C4016948"],"synonyms":[{"name":"Imerslund-Grasbeck syndrome 2","type":"exact"},{"name":"megaloblastic anemia, Norwegian type","type":"exact"}],"termid":"MONDO:0100157","xrefs":{"Monarch":{"xref_id":"0100157"}}}


id: PBO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 6 subunit","termid":"PBO:0043077"}


id: GO:0098957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"axonal transport of mitochondrion","termid":"GO:0019896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterograde axonal transport of mitochondrion","synonyms":[{"name":"anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0098957"}


id: MOD:00077
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to asymmetric dimethylarginine, N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:14570711","PubMed:11152131","RESID:AA0068","Unimod:36#R","ChEBI:17929","PubMed:12964758","PubMed:15835918","PubMed:3032834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"asymmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-([(dimethylamino)(imino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Asymmetric dimethylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"N5-[(dimethylamino)(imino)methyl]ornithine","type":"exact"},{"name":"NG,NG-dimethylarginine","type":"exact"},{"name":"NoNoMe2Arg","type":"exact"},{"name":"asymmetric dimethylarginine","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N-dimethlyated L-arginine","type":"exact"},{"name":"omega-N,omega-N-dimethyl-L-arginine","type":"exact"}],"termid":"MOD:00077"}


id: MONDO:1011084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, cattle","secondary_identifiers":["OMIA:001033-9913"],"termid":"MONDO:1011084","xrefs":{"Monarch":{"xref_id":"1011084"}}}


id: PBO:0058083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4300 host gene","termid":"PBO:0058083"}


id: FYPO:0008018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:7903653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on glutamine nitrogen source","synonyms":[{"name":"normal cell population growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0008018"}


id: PBO:0070319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 8","termid":"PBO:0070319"}


id: GO:0010703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histolysis (obsolete GO:0010703)","synonyms":[{"name":"down regulation of histolysis","type":"exact"},{"name":"down-regulation of histolysis","type":"exact"},{"name":"downregulation of histolysis","type":"exact"},{"name":"inhibition of histolysis","type":"narrow"}],"termid":"GO:0010703"}


id: PBO:0047387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 25","termid":"PBO:0047387"}


id: PBO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 2","termid":"PBO:0070864"}


id: GO:1902843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:24004945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"positively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of netrin-activated signaling pathway","synonyms":[{"name":"activation of netrin signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signal transduction pathway","type":"narrow"},{"name":"activation of netrin-activated signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signalling pathway","type":"narrow"},{"name":"activation of netrin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of netrin signaling pathway","type":"exact"},{"name":"positive regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"positive regulation of netrin-activated signalling pathway","type":"exact"},{"name":"positive regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up regulation of netrin signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of netrin signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"upregulation of netrin signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"upregulation of netrin-activated signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signalling pathway","type":"exact"},{"name":"upregulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902843"}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: FYPO:0002516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins earlier than normal. The duration of G2 phase is thus shorter than normal. The mitotic G2/M transition is the point at which a cell commits to entering M phase, and begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed.","definition_xrefs":["PomBase:mah","GO:0000086"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 phase progression","termid":"FYPO:0000563"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic G2/M phase transition","synonyms":[{"name":"advanced mitotic G2 phase progression","type":"related"},{"name":"advanced mitotic G2/M transition","type":"exact"},{"name":"cell cycle, mitotic G2 advance","type":"related"},{"name":"decreased duration of mitotic G2 phase","type":"related"},{"name":"decreased duration of mitotic G2 phase during vegetative growth","type":"related"},{"name":"decreased mitotic G2 duration","type":"related"},{"name":"increased rate of mitotic G2 phase progression","type":"related"},{"name":"mitotic G2 advance","type":"related"},{"name":"mitotic G2/M transition advance","type":"exact"},{"name":"mitotic G2/M transition advance during vegetative growth","type":"exact"},{"name":"mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"premature G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0002516"}


id: FYPO:0000940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased protein localization to mitotic SPB","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0000940"}


id: RO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x main_stem_of y if y is a branching structure and x is a channel that traces a linear path through y, such that x has higher capacity than any other such path.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"main_stem_of","termid":"RO:0002381"}


id: GO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid (obsolete GO:0005561)","synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"GO:0005561"}


id: GO:1901114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of erythromycin.","definition_xrefs":["UniPathway:UPA00240","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"erythromycin metabolic process","termid":"GO:1901113"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"erythromycin catabolic process","synonyms":[{"name":"erythromycin breakdown","type":"exact"},{"name":"erythromycin catabolism","type":"exact"},{"name":"erythromycin degradation","type":"exact"}],"termid":"GO:1901114"}


id: CHEBI:29105
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A zinc cation that has formula Zn.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc(2+)","termid":"CHEBI:29105"}


id: GO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heptamer that includes the tau and gamma products of the dnaX gene and the chi/psi subcomplex. Confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands.","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader complex","synonyms":[{"name":"DNA polymerase III, DnaX complex","type":"exact"},{"name":"DNA polymerase III, DnaX subcomplex","type":"exact"},{"name":"clamp loader complex","type":"broad"}],"termid":"GO:0043846"}


id: PBO:0017078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR10","termid":"PBO:0017078"}


id: GO:0102462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = quercetin 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin 3-sophoroside 7-O-rhamnosyltransferase activity (obsolete GO:0102462)","termid":"GO:0102462"}


id: GO:0010656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell apoptotic process","synonyms":[{"name":"negative regulation of muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010656"}


id: GO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates pseudohyphal growth.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100042)","termid":"GO:0100042"}


id: PBO:0059524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded heavy strand origin of replication","termid":"PBO:0059524"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: PBO:0066034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 3","termid":"PBO:0066034"}


id: GO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced coenzyme F420-(gamma-L-Glu)(n) + O2 = 2 oxidized coenzyme F420-(gamma-L-Glu)(n) + 2 H2O + 2 H+.","definition_xrefs":["RHEA:39711","PMID:15340796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coenzyme F420H2 oxidase activity","secondary_identifiers":["EC:1.5.3.22"],"synonyms":[{"name":"F420H2 oxidase activity","type":"exact"},{"name":"F420H2:oxygen oxidoreductase activity","type":"exact"},{"name":"reduced coenzyme F420 oxidase activity","type":"exact"}],"termid":"GO:0052765"}


id: MONDO:0024954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition produced in humans by the prolonged migration of animal nematode larvae in extraintestinal tissues other than skin; characterized by persistent hypereosinophilia, hepatomegaly, and frequently pneumonitis, commonly caused by Toxocara canis and Toxocara cati.","definition_xrefs":["MESH:D007816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxocariasis","termid":"MONDO:0005988"},{"relation_name":"is_a","term_name":"cutaneous larva migrans","termid":"MONDO:0018500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larva migrans, visceral","secondary_identifiers":["MEDGEN:9681","UMLS:C0023049"],"synonyms":[{"name":"Migran, visceral larva","type":"related"},{"name":"larva Migran, visceral","type":"related"},{"name":"migrans, visceral larva","type":"related"},{"name":"visceral larva Migran","type":"related"},{"name":"visceral larva migrans","type":"related"},{"name":"visceral larva migrans syndrome","type":"related"}],"termid":"MONDO:0024954","xrefs":{"Monarch":{"xref_id":"0024954"}}}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79907,72012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-proline catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70688"],"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0010133":null}}


id: GO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.","definition_xrefs":["RHEA:14709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"steroid Delta-isomerase activity","secondary_identifiers":["Reactome:R-HSA-193052","Reactome:R-HSA-6807052","Reactome:R-HSA-195690","Reactome:R-HSA-193073","Reactome:R-HSA-193961","EC:5.3.3.1","MetaCyc:STEROID-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"3-oxosteroid delta5-delta4-isomerase activity","type":"related"},{"name":"3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-keto steroid isomerase activity","type":"related"},{"name":"delta(5)-3-ketosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-steroid isomerase activity","type":"related"},{"name":"delta5(or delta4)-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-ketosteroid isomerase activity","type":"related"},{"name":"delta5-3-oxosteroid isomerase activity","type":"related"},{"name":"delta5-ketosteroid isomerase activity","type":"related"},{"name":"delta5-steroid isomerase activity","type":"related"},{"name":"hydroxysteroid isomerase activity","type":"related"},{"name":"steroid D-isomerase activity","type":"exact"},{"name":"steroid isomerase activity","type":"related"}],"termid":"GO:0004769"}


id: PBO:0059892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 15","termid":"PBO:0059892"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: GO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.","definition_xrefs":["GOC:das","GOC:mah","PMID:10542156","PMID:8122899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"nitrate assimilation","secondary_identifiers":["MetaCyc:PWY-381"],"synonyms":[{"name":"assimilatory nitrate reduction","type":"narrow"}],"termid":"GO:0042128"}


id: GO:0102635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-deoxycorticosterone + NADH + H+ = 4-pregnen-20,21-diol-3-one + NAD.","definition_xrefs":["HEA:47716","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"11-deoxycorticosterone reductase activity","secondary_identifiers":["RHEA:47716","MetaCyc:RXN-15607"],"termid":"GO:0102635"}


id: PBO:0087902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; required for flocculation, diploid filamentous growth, and haploid invasive growth; forms a heterodimer with Mss11p that interacts with the Swi/Snf complex during transcriptional activation of FLO1, FLO11, and STA1; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 142, which in other strains encodes tryptophan","termid":"PBO:0087902"}


id: PBO:0039122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1 like","termid":"PBO:0039122"}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: GO:0030185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitric oxide, nitrogen monoxide, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nitric oxide transport","termid":"GO:0030185"}


id: MONDO:0021018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant limb-girdle muscular dystrophy type 1D (LGMD1D) is a subtype of autosomal dominant limb-girdle muscular dystrophy characterized by an adult-onset of slowly progressive, proximal pelvic girdle weakness, with none, or only minimal, shoulder girdle involvement, and absence of cardiac and respiratory symptoms. Mild to moderate elevated creatine kinase serum levels and gait abnormalities are frequently observed. LGMD1D is caused by heterozygous missense mutations in the DNAJB6 gene at chr. 7q36.3.","definition_xrefs":["Orphanet:34516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, limb-girdle, autosomal dominant","termid":"MONDO:0015151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant limb-girdle muscular dystrophy type 1D (DNAJB6)","secondary_identifiers":["OMIM:603511","UMLS:C4721885","MEDGEN:1648441","MESH:C566370","GARD:12528","DOID:0110305"],"synonyms":[{"name":"DNAJB6 autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD1D","type":"exact"},{"name":"LGMD1D (DNAJB6)","type":"exact"},{"name":"LGMD1E","type":"related"},{"name":"LGMD1E (Bushby and Beckmann, 2003)","type":"related"},{"name":"autosomal dominant limb-girdle muscular dystrophy caused by mutation in DNAJB6","type":"exact"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1D","type":"related"},{"name":"autosomal dominant limb-girdle muscular dystrophy type 1E","type":"related"},{"name":"limb-girdle muscular dystrophy type 1D","type":"related"},{"name":"muscular dystrophy limb-girdle type 1D","type":"related"},{"name":"muscular dystrophy limb-girdle type 1E","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant 1","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 1D","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 1D, formerly","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 1E","type":"related"}],"termid":"MONDO:0021018","xrefs":{"Monarch":{"xref_id":"0021018"}}}


id: GO:1905622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.","definition_xrefs":["PMID:11606552","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"negatively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leaf development","synonyms":[{"name":"down regulation of leaf development","type":"exact"},{"name":"down-regulation of leaf development","type":"exact"},{"name":"downregulation of leaf development","type":"exact"},{"name":"inhibition of leaf development","type":"narrow"}],"termid":"GO:1905622"}


id: GO:0004708
data:
  {"annotated_genes":["SJAG_02342","SJAG_01181","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73298,76191,78075],"is_not":false,"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a T-X-Y motif in the activation loop of a MAP kinase (MAPK) substrate.","definition_xrefs":["PMID:12623839","PMID:38270553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine/tyrosine kinase activity","termid":"GO:0004712"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0004672","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"MAP kinase kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-3238999","Reactome:R-HSA-448951","Reactome:R-HSA-450333","Reactome:R-HSA-5218804","EC:2.7.12.2","Reactome:R-HSA-1247960","MetaCyc:2.7.12.2-RXN"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKK-activated) activity","type":"related"},{"name":"ERK activator kinase activity","type":"exact"},{"name":"MAP kinase kinase 4 activity","type":"narrow"},{"name":"MAP kinase kinase 7 activity","type":"narrow"},{"name":"MAP kinase or ERK kinase activity","type":"related"},{"name":"MAP2K","type":"related"},{"name":"MAPK activator activity","type":"exact"},{"name":"MAPKK","type":"related"},{"name":"MAPKK activity","type":"exact"},{"name":"MAPKK1","type":"related"},{"name":"MEK activity","type":"broad"},{"name":"MEK1","type":"related"},{"name":"MEK2","type":"related"},{"name":"MKK","type":"related"},{"name":"MKK2","type":"related"},{"name":"MKK4","type":"related"},{"name":"MKK6","type":"related"},{"name":"MKK7","type":"related"},{"name":"STK27","type":"related"},{"name":"mitogen-activated protein kinase kinase activity","type":"related"}],"termid":"GO:0004708","terms_by_termid":{"GO:0004708":null}}


id: SO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A loop in ribosomal RNA containing the sites of attack for ricin and sarcin.","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcin_like_RNA_motif","synonyms":[{"name":"sarcin like RNA motif","type":"exact"},{"name":"sarcin/ricin RNA domain","type":"exact"},{"name":"sarcin/ricin domain","type":"exact"},{"name":"sarcin/ricin loop","type":"exact"}],"termid":"SO:0000024"}


id: PBO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 5-2","termid":"PBO:0051378"}


id: GO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a light stimulus is received and converted into a molecular signal. Downstream processing of the light information in addition to other sensory data allows organisms to perceive the orientation of a magnetic field.","definition_xrefs":["GOC:ai","GOC:dos","PMID:15886990","Wikipedia:Magnetoception"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus involved in sensory perception","termid":"GO:0050962"},{"relation_name":"part_of","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in magnetoreception","synonyms":[{"name":"magnetoreception, detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of light stimulus","type":"exact"},{"name":"sensory detection of light stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of light stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050980"}


id: PBO:0089733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6","termid":"PBO:0089733"}


id: MONDO:0006378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant mesothelioma that arises from the pleura and is characterized by the presence of cells with epithelioid morphology. The epithelioid cells usually have eosinophilic cytoplasm, bland nuclei, and form tubulopapillary, microglandular, or sheet-like patterns.","definition_xrefs":["NCIT:C45662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pleural mesothelioma","termid":"MONDO:0005112"},{"relation_name":"is_a","term_name":"malignant epithelioid mesothelioma","termid":"MONDO:0005599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleural epithelioid mesothelioma","secondary_identifiers":["EFO:1000484","MEDGEN:318031","UMLS:C1709574"],"synonyms":[{"name":"malignant epithelioid mesothelioma of pleura","type":"exact"},{"name":"pleura malignant epithelioid mesothelioma","type":"exact"},{"name":"pleural epithelioid mesothelioma","type":"exact"}],"termid":"MONDO:0006378","xrefs":{"Monarch":{"xref_id":"0006378"}}}


id: PBO:0090747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein Rud3","termid":"PBO:0090747"}


id: PBO:0086938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase; Myo2p-binding protein implicated in mother-to-bud transport of cortical endoplasmic reticulum (ER), late Golgi, and mitochondria during cell division; function is regulated at multiple levels; abundance of active Ypt11p forms is controlled by phosphorylation status and degradation; normally a low-abundance protein whose ER localization is only detected when protein is highly over expressed","termid":"PBO:0086938"}


id: PR:O94368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.02c","synonyms":[{"name":"Spom972h-ppr1","type":"exact"}],"termid":"PR:O94368"}


id: PBO:0119984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF25 antisense RNA 1","termid":"PBO:0119984"}


id: MONDO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"excessive tearing","termid":"MONDO:0001793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epiphora due to insufficient drainage","secondary_identifiers":["SCTID:85042000","icd11.foundation:2073269541","UMLS:C0155234","MEDGEN:509862","ICD9:375.22","DOID:13756"],"termid":"MONDO:0001792","xrefs":{"Monarch":{"xref_id":"0001792"}}}


id: MONDO:1011711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral deafness and vestibular dysfunction, non-human animal","secondary_identifiers":["OMIA:002196"],"termid":"MONDO:1011711","xrefs":{"Monarch":{"xref_id":"1011711"}}}


id: SO:1001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001255 status_of_coding_sequence (obsolete SO:1001255)","termid":"SO:1001255"}


id: GO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a T cell receptor, the antigen-recognizing receptor on the surface of T cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"T cell receptor binding","synonyms":[{"name":"T lymphocyte receptor binding","type":"exact"},{"name":"T-cell receptor binding","type":"exact"},{"name":"T-lymphocyte receptor binding","type":"exact"},{"name":"TCR binding","type":"exact"}],"termid":"GO:0042608"}


id: PBO:0040890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP binding endothelial regulator","termid":"PBO:0040890"}


id: GO:0021800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex cell migration","termid":"GO:0021795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration","termid":"GO:0021800"}


id: GO:0102371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: betulin + NADPH(4-) + H+ + O2 = betulinic aldehyde + NADP(3-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete betulin dehydrogenase activity (obsolete GO:0102371)","termid":"GO:0102371"}


id: MONDO:0100525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A newly discovered disorder caused by a change (variant or mutation) in the TCF7L2 gene. This mutation may be responsible for developmental delays in childhood, intellectual disability, autism, myopia, ADHD, abnormal physical features and other problems. There is a wide spectrum of severity for individuals affected with TRND. Many of the symptoms of TRND overlap with other neurodevelopmental disorders. TRND must be diagnosed with a genetic test and cannot be diagnosed by symptoms alone.","definition_xrefs":["PMID:34003604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"TCF7L2-related neurodevelopmental disorder","termid":"MONDO:0100525","xrefs":{"Monarch":{"xref_id":"0100525"}}}


id: SO:1001186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001186 sequence_variant_causing_cryptic_splice_acceptor_activation (obsolete SO:1001186)","synonyms":[{"name":"sequence variant causing cryptic splice acceptor activation","type":"exact"}],"termid":"SO:1001186"}


id: PBO:0110824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Toe2","termid":"PBO:0110824"}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: GO:0099614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported, tethered to or otherwise maintained in a spore cell wall.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to spore cell wall","synonyms":[{"name":"protein targeting to spore cell wall","type":"related"}],"termid":"GO:0099614"}


id: PATO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Friability"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friability","termid":"PATO:0002405"}


id: PR:P36613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin mcs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.02","secondary_identifiers":["UniProtKB:P36613"],"synonyms":[{"name":"Spom972h-CCNH","type":"exact"},{"name":"mitotic catastrophe suppressor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36613"}


id: MONDO:0008079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis-pheochromocytoma-duodenal carcinoid syndrome","secondary_identifiers":["OMIM:162240","UMLS:C1834232","MEDGEN:331696","MESH:C563522"],"synonyms":[{"name":"Npdc syndrome","type":"related"},{"name":"duodenal carcinoid syndrome","type":"related"},{"name":"neurofibromatosis-pheochromocytoma-duodenal carcinoid syndrome","type":"exact"}],"termid":"MONDO:0008079","xrefs":{"Monarch":{"xref_id":"0008079"}}}


id: MONDO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blocking of a blood vessel in the skull by an embolus which can be a blood clot (thrombus) or other undissolved material in the blood stream. Most emboli are of cardiac origin and are associated with heart diseases. Other non-cardiac sources of emboli are usually associated with vascular diseases.","definition_xrefs":["MESH:D020766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial embolism","secondary_identifiers":["ICD9:434.1","ICD9:434.10","SCTID:75543006","MEDGEN:155710","EFO:1000991","UMLS:C0752140","DOID:4372"],"synonyms":[{"name":"cerebral embolism","type":"exact"},{"name":"cerebral embolism with cerebral infarction","type":"exact"}],"termid":"MONDO:0006809","xrefs":{"Monarch":{"xref_id":"0006809"}}}


id: PBO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 25","termid":"PBO:0070490"}


id: PBO:0080194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 2","termid":"PBO:0080194"}


id: GO:0106046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of glyoxal from a glycated guanine, to form glycolate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanine deglycation, glyoxal removal","termid":"GO:0106046"}


id: FYPO:0005754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-alpha-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PMID:11514435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased (1->3)-alpha-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-alpha-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-alpha-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005754"}


id: SO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_cluster","synonyms":[{"name":"V D DJ J cluster","type":"exact"},{"name":"V-D-(DJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000530"}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29576969","PMID:29626935","PMID:29230098","PMID:29086764","PMID:29182528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: PBO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 2","termid":"PBO:0075511"}


id: MONDO:0006790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A regressive change of teeth characterized by excessive development of secondary cementum on the tooth surface. It may occur on any part of the root, but the apical two-thirds are most commonly affected. (Dorland, 27th ed)","definition_xrefs":["MESH:D006936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercementosis","secondary_identifiers":["DOID:12733","UMLS:C0020441","MEDGEN:9360","ICD9:521.5","EFO:1000970","SCTID:78537008","ICD10CM:K03.4","MedDRA:10020596"],"synonyms":[{"name":"cementation hyperplasia","type":"exact"}],"termid":"MONDO:0006790","xrefs":{"Monarch":{"xref_id":"0006790"}}}


id: SO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA sequence produced from some base calling or alignment algorithm which uses aligned or assembled multiple gDNA sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_gDNA","synonyms":[{"name":"consensus gDNA","type":"exact"},{"name":"consensus genomic DNA","type":"exact"}],"termid":"SO:0001931"}


id: MONDO:0700124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 21 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 disorder","termid":"MONDO:0700124","xrefs":{"Monarch":{"xref_id":"0700124"}}}


id: PBO:0065756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 1","termid":"PBO:0065756"}


id: PBO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof9","termid":"PBO:0003804"}


id: GO:0102264
data:
  {"annotated_genes":["SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104234],"is_not":false,"summary":null,"term":"GO:0102264"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20 in tRNA + NAD(P) = H+ + a uracil20 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016491","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA-dihydrouridine20 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12456"],"termid":"GO:0102264","terms_by_termid":{"GO:0102264":null}}


id: PBO:0028704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage_during_vegetative_growth","termid":"PBO:0028704"}


id: MONDO:0015917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant glioma (obsolete MONDO:0015917)","termid":"MONDO:0015917","xrefs":{"Monarch":{"xref_id":"0015917"}}}


id: PBO:0091289
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3H","termid":"PBO:0091289"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: MONDO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by significant cytologic atypia. The atypical cells are large with pleomophic hyperchromatic nuclei.","definition_xrefs":["NCIT:C40167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bizarre leiomyoma","termid":"MONDO:0003288"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus bizarre leiomyoma","secondary_identifiers":["MEDGEN:275555","UMLS:C1519853","DOID:13958"],"synonyms":[{"name":"bizarre leiomyoma of body of uterus","type":"exact"},{"name":"body of uterus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus Symplastic leiomyoma","type":"exact"},{"name":"uterine corpus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus leiomyoma with bizarre nuclei","type":"exact"},{"name":"uterine corpus leiomyoma, atypical variant","type":"exact"}],"termid":"MONDO:0001846","xrefs":{"Monarch":{"xref_id":"0001846"}}}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: PR:O13792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.14c","secondary_identifiers":["UniProtKB:O13792"],"synonyms":[{"name":"Spom972h-DDX39B","type":"exact"}],"termid":"PR:O13792"}


id: PBO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA-binding subunit Rmn1","termid":"PBO:0090428"}


id: GO:0042048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to an odor.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory behavior","synonyms":[{"name":"behavioral response to scent","type":"exact"},{"name":"behavioral response to smell","type":"exact"},{"name":"behavioural response to odour","type":"exact"},{"name":"behavioural response to scent","type":"exact"},{"name":"behavioural response to smell","type":"exact"},{"name":"olfactory behaviour","type":"exact"}],"termid":"GO:0042048"}


id: GO:0038068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038068)","synonyms":[{"name":"MAP kinase kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP2K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038068"}


id: PBO:0048015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 3","termid":"PBO:0048015"}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["PMID:17615392","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: FYPO:0004774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular proline level","termid":"FYPO:0005237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar proline level","synonyms":[{"name":"increased level of proline in vacuole","type":"exact"},{"name":"increased vacuolar L-proline level","type":"exact"},{"name":"increased vacuolar proline level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar proline level during vegetative growth","type":"exact"}],"termid":"FYPO:0004774"}


id: GO:0000287
data:
  {"annotated_genes":["SJAG_04882","SJAG_00074","SJAG_05010","SJAG_02247","SJAG_02897","SJAG_01955","SJAG_04233","SJAG_01731","SJAG_01648","SJAG_00231","SJAG_00461","SJAG_02206","SJAG_00044","SJAG_04970","SJAG_03723","SJAG_01404","SJAG_04972","SJAG_00669","SJAG_04865","SJAG_02369","SJAG_00853","SJAG_02107","SJAG_03985","SJAG_00502","SJAG_03813","SJAG_03096","SJAG_01351","SJAG_02796","SJAG_05200","SJAG_04487","SJAG_01875","SJAG_03811","SJAG_04579","SJAG_02370","SJAG_01945","SJAG_00134","SJAG_03626","SJAG_00353","SJAG_04842","SJAG_03180","SJAG_03562","SJAG_00381","SJAG_00402","SJAG_05209","SJAG_06022","SJAG_01209","SJAG_04449","SJAG_01254","SJAG_02734","SJAG_02679","SJAG_03276","SJAG_02763","SJAG_04747","SJAG_04362","SJAG_03743","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56991,57069,57151,57799,57870,58251,58599,58723,58836,59283,59605,60481,61128,61282,61537,61785,61861,62400,62424,62442,63335,63385,63671,63713,64085,64389,65387,65525,66203,66795,66812,67393,67727,68813,69080,69295,69509,69869,70231,70425,72738,79443,81278,81689,88156,89780,90934,91031,91151,96708,99361,100628,102465,103287,105458,109714],"is_not":false,"summary":null,"term":"GO:0000287"}]},"cv_name":"molecular_function","definition":"Binding to a magnesium (Mg) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00074":null,"SJAG_00134":null,"SJAG_00231":null,"SJAG_00353":null,"SJAG_00381":null,"SJAG_00402":null,"SJAG_00461":null,"SJAG_00502":null,"SJAG_00669":null,"SJAG_00706":null,"SJAG_00853":null,"SJAG_01209":null,"SJAG_01254":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01648":null,"SJAG_01731":null,"SJAG_01875":null,"SJAG_01945":null,"SJAG_01955":null,"SJAG_02107":null,"SJAG_02206":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02370":null,"SJAG_02679":null,"SJAG_02734":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_02897":null,"SJAG_03096":null,"SJAG_03180":null,"SJAG_03276":null,"SJAG_03562":null,"SJAG_03626":null,"SJAG_03723":null,"SJAG_03743":null,"SJAG_03811":null,"SJAG_03813":null,"SJAG_03985":null,"SJAG_04233":null,"SJAG_04362":null,"SJAG_04449":null,"SJAG_04487":null,"SJAG_04579":null,"SJAG_04747":null,"SJAG_04842":null,"SJAG_04865":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_04972":null,"SJAG_05010":null,"SJAG_05200":null,"SJAG_05209":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"magnesium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mg binding","type":"exact"},{"name":"magnesium binding","type":"exact"}],"termid":"GO:0000287","terms_by_termid":{"GO:0000287":null}}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: PBO:0044616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase domain containing","termid":"PBO:0044616"}


id: MONDO:0850067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune deficiency disease","termid":"MONDO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune deficiency due to impaired neutrophil phagocytosis and migration","secondary_identifiers":["MEDGEN:1843340","Orphanet:619941","UMLS:C5680413","GARD:22464"],"termid":"MONDO:0850067","xrefs":{"Monarch":{"xref_id":"0850067"}}}


id: PBO:0068503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 91, pseudogene","termid":"PBO:0068503"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: GO:0006893
data:
  {"annotated_genes":["SJAG_04044","SJAG_04358","SJAG_02240","SJAG_03838","SJAG_02320","SJAG_03970","SJAG_04609","SJAG_00330","SJAG_01335","SJAG_03864","SJAG_00826","SJAG_03938","SJAG_02753","SJAG_00430","SJAG_03754","SJAG_00144","SJAG_01114","SJAG_00858","SJAG_00916","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57585,72446,73681,74360,77784,79159,91745,99273,100369,105845,106942],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[79367,94644,112595,109152,71942,106595,105967,108363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[87539],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00430":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01335":null,"SJAG_01516":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03754":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"Golgi to plasma membrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to plasma membrane vesicle-mediated transport","type":"exact"}],"termid":"GO:0006893","terms_by_termid":{"GO:0006893":null,"GO:0042997":null,"GO:0043001":null}}


id: GO:0036009
data:
  {"annotated_genes":["SJAG_00943","SJAG_03949","SJAG_02350","SJAG_00286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75050,109772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[95989,94996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[protein] + S-adenosyl-L-methionine = N(5)-methyl-L-glutaminyl-[protein] + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:11847124","RHEA:57452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_03949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"protein-glutamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6800138"],"synonyms":[{"name":"protein glutamine N-methylase activity","type":"exact"},{"name":"protein glutamine N-methyltransferase activity","type":"exact"}],"termid":"GO:0036009","terms_by_termid":{"GO:0102559":null,"GO:1990259":null}}


id: PBO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-25 (pseudogene)","termid":"PBO:0051146"}


id: PBO:0079374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 9","termid":"PBO:0079374"}


id: PBO:0042238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 1","termid":"PBO:0042238"}


id: GO:1905250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of memory.","definition_xrefs":["PMID:25905804","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of memory (obsolete GO:1905250)","synonyms":[{"name":"enhancement of memory","type":"narrow"}],"termid":"GO:1905250"}


id: PBO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENATAC divergent transcript","termid":"PBO:0042717"}


id: PBO:0089416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S45","termid":"PBO:0089416"}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: GO:2000844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of testosterone secretion","termid":"GO:2000843"},{"relation_name":"negatively_regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of testosterone secretion","termid":"GO:2000844"}


id: GO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chalcone, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chalcone metabolic process","termid":"GO:0009714"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"chalcone catabolic process","synonyms":[{"name":"chalcone breakdown","type":"exact"},{"name":"chalcone catabolism","type":"exact"},{"name":"chalcone degradation","type":"exact"}],"termid":"GO:0046280"}


id: GO:0052646
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70828,63823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alditol phosphates, any phosphorylated polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alditol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"alditol phosphate metabolism","type":"exact"}],"termid":"GO:0052646","terms_by_termid":{"GO:0046168":null}}


id: GO:0072441
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101918],"is_not":false,"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to DNA replication checkpoint signaling","termid":"GO:0072438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic DNA replication checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0072441","terms_by_termid":{"GO:0072441":null}}


id: GO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle remodeling","secondary_identifiers":["Reactome:R-HSA-8964041"],"synonyms":[{"name":"LDL remodeling","type":"exact"},{"name":"LDL remodelling","type":"exact"},{"name":"low-density lipoprotein particle remodelling","type":"exact"},{"name":"small dense LDL formation","type":"related"},{"name":"small dense low-density lipoprotein particle formation","type":"related"}],"termid":"GO:0034374"}


id: PBO:0004948
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translocase of the Inner Membrane","termid":"PBO:0004948"}


id: MONDO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methotrexate-associated lymphoproliferative disorders are rare immunodeficiency-associated lymphoproliferative diseases characterized by lymphoid proliferation or lymphomas (large B-cell lymphoma, T-cell lymphoma, Hodgkin lymphoma, reactive lymphadenitis and a polymorphic post-transplant lymphoproliferative disorder) that develop in patients with different autoimmune diseases treated with methotrexate. Swelling is the predominant manifestation of the disease and regression after methotrexate withdrawal is observed in a significant proportion of patients.","definition_xrefs":["Orphanet:86904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"methotrexate-associated lymphoproliferative disorders","secondary_identifiers":["UMLS:C1334749","GARD:19083","DOID:5821","MEDGEN:233702","icd11.foundation:1520483526","NCIT:C7184"],"synonyms":[{"name":"MTX-LPD","type":"exact"},{"name":"MTX-associated lymphoproliferative disorders","type":"exact"},{"name":"methotrexate-associated lymphoproliferation","type":"exact"},{"name":"methotrexate-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0019483","xrefs":{"Monarch":{"xref_id":"0019483"}}}


id: GO:1905703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"regulation of inhibitory synapse assembly","termid":"GO:1905702"},{"relation_name":"negatively_regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of inhibitory synapse assembly","synonyms":[{"name":"down regulation of inhibitory synapse assembly","type":"exact"},{"name":"down regulation of inhibitory synapse formation","type":"exact"},{"name":"down-regulation of inhibitory synapse assembly","type":"exact"},{"name":"down-regulation of inhibitory synapse formation","type":"exact"},{"name":"downregulation of inhibitory synapse assembly","type":"exact"},{"name":"downregulation of inhibitory synapse formation","type":"exact"},{"name":"inhibition of inhibitory synapse assembly","type":"narrow"},{"name":"inhibition of inhibitory synapse formation","type":"narrow"},{"name":"negative regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905703"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: PBO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 3","termid":"PBO:0056806"}


id: GO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sterigmatocystin + S-adenosyl-L-methionine = 7-O-methylsterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["EC:2.1.1.110","MetaCyc:2.1.1.110-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sterigmatocystin 7-O-methyltransferase activity","secondary_identifiers":["RHEA:15561"],"synonyms":[{"name":"O-methyltransferase II activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047146"}


id: GO:0015016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-[heparan sulfate](n) = adenosine 3',5'-bisphosphate + 2 H+ + N-sulfo-alpha-D-glucosaminyl-[heparan sulfate](n).","definition_xrefs":["RHEA:21980","EC:2.8.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"heparan sulfate N-sulfotransferase activity","secondary_identifiers":["GO:0004393","GO:0015022","Reactome:R-HSA-2022860","GO:0051910","MetaCyc:HEPARITIN-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-HSST activity","type":"related"},{"name":"N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"N-heparan sulfate sulfotransferase activity","type":"related"},{"name":"PAPS:DSH sulfotransferase activity","type":"related"},{"name":"PAPS:N-desulfoheparin sulfotransferase activity","type":"related"},{"name":"[heparan sulfate]-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"[heparan sulphate]-glucosamine N-sulphotransferase activity","type":"exact"},{"name":"desulfoheparin sulfotransferase activity","type":"exact"},{"name":"glucosaminyl N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate 2-N-sulfotransferase activity","type":"related"},{"name":"heparan sulfate N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulfotransferase activity","type":"related"},{"name":"heparin N-deacetylase/N-sulphotransferase activity","type":"related"},{"name":"heparin N-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulfotransferase activity","type":"exact"},{"name":"heparitin N-sulphotransferase activity","type":"exact"},{"name":"heparitin sulfotransferase activity","type":"exact"}],"termid":"GO:0015016"}


id: MONDO:0012184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pierson syndrome is characterized by the association of congenital nephrotic syndrome and ocular anomalies with microcoria.","definition_xrefs":["Orphanet:2670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"LAMB2-related infantile-onset nephrotic syndrome","termid":"MONDO:0013621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"Pierson syndrome","secondary_identifiers":["OMIM:609049","icd11.foundation:555082533","DOID:0060852","GARD:9420","MEDGEN:373199","NCIT:C128145","SCTID:723449004","NANDO:2200117","UMLS:C1836876","MESH:C537185"],"synonyms":[{"name":"Pierson syndrome","type":"exact"},{"name":"microcoria - congenital nephrosis","type":"related"},{"name":"microcoria - congenital nephrotic syndrome","type":"related"},{"name":"microcoria-congenital nephrosis syndrome","type":"exact"},{"name":"microcoria-congenital nephrotic syndrome","type":"related"}],"termid":"MONDO:0012184","xrefs":{"Monarch":{"xref_id":"0012184"}}}


id: PBO:0111423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo7","termid":"PBO:0111423"}


id: GO:0047819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + H2O + O2 = 2-oxoglutarate + NH3 + H2O2, and D-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-glutamate(D-aspartate) oxidase activity","synonyms":[{"name":"D-glutamate(D-aspartate):oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-glutamic-aspartic oxidase activity","type":"related"},{"name":"D-monoaminodicarboxylic acid oxidase activity","type":"related"}],"termid":"GO:0047819"}


id: GO:0102208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:31411","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol methylase activity","secondary_identifiers":["EC:2.1.1.222","MetaCyc:RXN-12160"],"termid":"GO:0102208"}


id: PBO:0078447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P2","termid":"PBO:0078447"}


id: PBO:0005449
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Wall Protein","termid":"PBO:0005449"}


id: GO:0003333
data:
  {"annotated_genes":["SJAG_02605","SJAG_02150","SJAG_00522","SJAG_02946","SJAG_04725","SJAG_01770","SJAG_03827","SJAG_02716","SJAG_03899","SJAG_03970","SJAG_04588","SJAG_03400","SJAG_00626","SJAG_04718","SJAG_03591","SJAG_04983","SJAG_02941","SJAG_02133","SJAG_00543","SJAG_04715","SJAG_00991","SJAG_06598","SJAG_02113","SJAG_02029","SJAG_04135","SJAG_04296","SJAG_05346","SJAG_04787","SJAG_05342","SJAG_04957","SJAG_01636","SJAG_03829","SJAG_04295","SJAG_01998","SJAG_00019","SJAG_04903","SJAG_00051","SJAG_00015","SJAG_02955","SJAG_00877","SJAG_00149","SJAG_02947","SJAG_01923","SJAG_01336","SJAG_01994","SJAG_02062","SJAG_04984","SJAG_01096","SJAG_04637","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74950,77243,77276,78074,78583,78730,79391,79549,80469,81699,81959,82195,89169,95193,99540,103054,117870,117871,117872,117873,117874,117875,117876,117877],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[78841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[102328,109597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[89859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[103551,103553,103554,96843,103552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[64622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[71827,97730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[102329,109598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[95520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[99875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[96857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[98331,64321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[96065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[103361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[96858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[96859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[107462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[103363,109599,102330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[107463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[87540],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[92804,91219,98386,110115],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[92805,91220,98387],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[92806],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[99869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[100737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035524"},{"annotations":[90082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"transmembrane 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id: PBO:0085147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolin, nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; binds to G-quadruplex DNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation","termid":"PBO:0085147"}


id: PBO:0119276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic cysteine-tRNA ligase Crs1","termid":"PBO:0119276"}


id: GO:0072063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the short descending thin limb over time, from its formation to the mature structure. The short descending thin limb is the descending thin limb of a short nephron that has a squamous epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"descending thin limb development","termid":"GO:0072022"},{"relation_name":"part_of","term_name":"short nephron development","termid":"GO:0072030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short descending thin limb development","termid":"GO:0072063"}


id: GO:0060561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in morphogenesis","synonyms":[{"name":"apoptosis involved in development","type":"related"},{"name":"apoptosis involved in morphogenesis","type":"narrow"},{"name":"morphogenetic apoptosis","type":"related"}],"termid":"GO:0060561"}


id: MONDO:0850108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune cerebellar ataxia with characteristic antibodies","secondary_identifiers":["GARD:22503","Orphanet:624259","MEDGEN:1842300","UMLS:C5680404"],"termid":"MONDO:0850108","xrefs":{"Monarch":{"xref_id":"0850108"}}}


id: PBO:0065743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-phosphoxylose phosphatase 1","termid":"PBO:0065743"}


id: PBO:0067133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 181, pseudogene","termid":"PBO:0067133"}


id: PBO:0027136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G2_phase","termid":"PBO:0027136"}


id: PR:Q9UUM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC405.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C405.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.02c","synonyms":[{"name":"Spom972h-SPBC405.02c","type":"exact"}],"termid":"PR:Q9UUM6"}


id: GO:0098867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone.","definition_xrefs":["PMID:26399686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone growth","termid":"GO:0098868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone growth","termid":"GO:0098867"}


id: GO:0140223
data:
  {"annotated_genes":["SJAG_03007","SJAG_04368","SJAG_01475","SJAG_01808","SJAG_03095","SJAG_03900","SJAG_00735","SJAG_00067","SJAG_01827","SJAG_00584","SJAG_04766","SJAG_00095","SJAG_01744","SJAG_00116","SJAG_05331","SJAG_00758","SJAG_01710","SJAG_04977","SJAG_00512","SJAG_02815","SJAG_03546","SJAG_00585","SJAG_04654","SJAG_00150","SJAG_03285","SJAG_02747","SJAG_01523","SJAG_02541","SJAG_03107","SJAG_00159","SJAG_03354","SJAG_04917","SJAG_03120","SJAG_00202","SJAG_02458","SJAG_01207","SJAG_02813","SJAG_04852","SJAG_01712","SJAG_00421","SJAG_03206","SJAG_03752","SJAG_00995","SJAG_00692","SJAG_00741","SJAG_00872","SJAG_00958","SJAG_02174","SJAG_04274","SJAG_03618","SJAG_05339","SJAG_00901","SJAG_00650","SJAG_04083","SJAG_04614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107242,108721,104822,73850,73291,109311,69831,95075,92650,65017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001181"},{"annotations":[105604,92987,101823,76206,79045,103145,108045,117176,97122,89728,89354,75410,113830,82124,80986,88748,72245,93626,108550,111671,114742,73805,73097,87951,77344,102685,105013,107232,82178,114672,114396,76724,78486,91654,78615,112559,99742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016251"},{"annotations":[108702,88380,112239,114967,106480,99093,79341,95078,87642,115808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000995"}]},"cv_name":"molecular_function","definition":"A molecular function required for core promoter activity that mediates the assembly of the RNA polymerase holoenzyme at promoter DNA to form the pre-initiation complex (PIC). General transcription factors (GTFs) bind to and open promoter DNA, initiate RNA synthesis and stimulate the escape of the polymerase from the promoter. Not all subunits of the general transcription factor are necessarily present at all promoters to initiate transcription. GTFs act at each promoter, although the exact subunit composition at individual promoters may vary.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00202":null,"SJAG_00421":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00958":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01710":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_01808":null,"SJAG_01827":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03120":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03618":null,"SJAG_03752":null,"SJAG_03900":null,"SJAG_04083":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04766":null,"SJAG_04852":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_05331":null,"SJAG_05339":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"GTF activity","type":"exact"},{"name":"basal transcription factor activity","type":"exact"},{"name":"general transcription factor activity","type":"exact"}],"termid":"GO:0140223","terms_by_termid":{"GO:0000995":null,"GO:0001181":null,"GO:0016251":null}}


id: PBO:0058980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLIP antisense RNA 1","termid":"PBO:0058980"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: MONDO:0016254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare variants of adenocarcinoma of the corpus uteri (obsolete MONDO:0016254)","secondary_identifiers":["Orphanet:213574"],"termid":"MONDO:0016254","xrefs":{"Monarch":{"xref_id":"0016254"}}}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: GO:1902273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"negatively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"down regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"down-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"downregulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"inhibition of (R)-carnitine transmembrane transport","type":"narrow"}],"termid":"GO:1902273"}


id: PBO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-metabolizing bifunctional protein (predicted)","termid":"PBO:0009639"}


id: PR:O60103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase MARCH6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04016","PRO:DNx","PANTHER:PTHR13145:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase doa10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.07","secondary_identifiers":["UniProtKB:O60103"],"synonyms":[{"name":"Spom972h-MARCH6","type":"exact"}],"termid":"PR:O60103"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: FYPO:0002164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring in an abnormal location, and the ring has a curved, or C-shaped, profile. The normal location is at the midpoint of, and perpendicular to, the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring displaced from midpoint","termid":"FYPO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0004803","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized, curved actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring displaced from midpoint and bent","type":"related"},{"name":"actomyosin contractile ring displaced from midpoint and curved","type":"exact"},{"name":"contractile ring displaced from cell centre and curved","type":"exact"},{"name":"mislocalised, curved actomyosin contractile ring","type":"exact"},{"name":"mislocalized, curved actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"mislocalized, curved actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"mislocalized, curved cytokinetic contractile ring","type":"exact"},{"name":"mislocalized, curved mitotic contractile ring","type":"exact"}],"termid":"FYPO:0002164"}


id: GO:0005594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type IX trimer","termid":"GO:0005594"}


id: PBO:0045842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 32","termid":"PBO:0045842"}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: PBO:0043132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor","termid":"PBO:0043132"}


id: PBO:0055810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1","termid":"PBO:0055810"}


id: MONDO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by serous epithelial cells in a fibrotic stroma.","definition_xrefs":["NCIT:C40032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"},{"relation_name":"is_a","term_name":"serous cystadenofibroma","termid":"MONDO:0005182"},{"relation_name":"is_a","term_name":"ovarian serous adenofibroma","termid":"MONDO:0006340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian serous cystadenofibroma","secondary_identifiers":["MEDGEN:167919","DOID:7320","UMLS:C0877572"],"synonyms":[{"name":"ovarian serous cystadenofibroma","type":"exact"},{"name":"ovary serous cystadenofibroma","type":"exact"}],"termid":"MONDO:0004185","xrefs":{"Monarch":{"xref_id":"0004185"}}}


id: PBO:0061100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 4 X-linked","termid":"PBO:0061100"}


id: GO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E)-2-hydroxy-6-oxohepta-2,4-dienoate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + acetate + H+.","definition_xrefs":["RHEA:59220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity","secondary_identifiers":["EC:3.7.1.25","MetaCyc:2-OH-6-OXOHEPTA-2-4-DIENOATE-HYDR-RXN","UM-BBD_reactionID:r0263"],"termid":"GO:0018765"}


id: MONDO:0021303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoma that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"},{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"adenoma of small intestine","secondary_identifiers":["SCTID:399422005","UMLS:C1302392","NCIT:C5340","MEDGEN:226995"],"synonyms":[{"name":"adenoma of small bowel","type":"exact"},{"name":"adenoma of the small bowel","type":"exact"},{"name":"adenoma of the small intestine","type":"exact"},{"name":"small bowel adenoma","type":"exact"},{"name":"small intestinal adenoma","type":"exact"},{"name":"small intestine adenoma","type":"exact"}],"termid":"MONDO:0021303","xrefs":{"Monarch":{"xref_id":"0021303"}}}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: PBO:0026932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_ubiquitin_conjugate_level","termid":"PBO:0026932"}


id: PBO:0063691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental growth factor","termid":"PBO:0063691"}


id: FYPO:0002150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in a population of spores are viable. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell population","termid":"FYPO:0002059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002059"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002059","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"inviable spore population","synonyms":[{"name":"essential in spore population","type":"related"},{"name":"inviable population of spores","type":"exact"},{"name":"lethal in spore population","type":"exact"}],"termid":"FYPO:0002150"}


id: PBO:0017515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 Pre1 (predicted)","termid":"PBO:0017515"}


id: MONDO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hantavirus pulmonary syndrome (obsolete MONDO:0005781)","termid":"MONDO:0005781","xrefs":{"Monarch":{"xref_id":"0005781"}}}


id: FYPO:0001448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"trehalose absent from cell during heat shock","synonyms":[{"name":"absent trehalose","type":"exact"},{"name":"trehalose absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"trehalose absent from cell during vegetative growth and during heat shock","type":"exact"}],"termid":"FYPO:0001448"}


id: MONDO:1012496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Dahlem dwarfism, non-human animal","termid":"MONDO:1011969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dahlem dwarfism, rabbit","secondary_identifiers":["OMIA:001998-9986"],"termid":"MONDO:1012496","xrefs":{"Monarch":{"xref_id":"1012496"}}}


id: PBO:0090218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidate cytidylyltransferase Tam41","termid":"PBO:0090218"}


id: PBO:0082454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression","termid":"PBO:0082454"}


id: GO:0034181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 13 signaling pathway","termid":"GO:0034179"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"positive regulation of TLR13 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034181"}


id: PBO:0039313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 7","termid":"PBO:0039313"}


id: PBO:0029185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029185"}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: PBO:0066348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCCD1 and UNC45A antisense RNA 1","termid":"PBO:0066348"}


id: PBO:0116756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 2","termid":"PBO:0116756"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77387],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: GO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from host early endosomes by lower lumenal pH and different protein composition. Host late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome","termid":"GO:0044184"}


id: PBO:0049656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 10, pseudogene","termid":"PBO:0049656"}


id: PBO:0053529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 526","termid":"PBO:0053529"}


id: MONDO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fractures of the short, constricted portion of the thigh bone between the femur head and the trochanters. It excludes intertrochanteric fractures which are HIP FRACTURES.","definition_xrefs":["MESH:D005265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hip fracture","termid":"MONDO:0005327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"femoral neck fracture","secondary_identifiers":["SCTID:5913000"],"synonyms":[{"name":"bone fracture of neck of femur","type":"exact"},{"name":"femoral neck fracture","type":"exact"},{"name":"femur neck fracture","type":"related"},{"name":"femur neck fractures","type":"related"},{"name":"fracture of hip","type":"related"},{"name":"fracture of neck of femur","type":"exact"},{"name":"neck of femur bone fracture","type":"exact"},{"name":"nof - fracture of neck of femur","type":"related"}],"termid":"MONDO:0043589","xrefs":{"Monarch":{"xref_id":"0043589"}}}


id: PBO:0056981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30a","termid":"PBO:0056981"}


id: GO:0043791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylamine + a dimethylamine corrinoid protein = a methylated dimethylamine corrinoid protein + methylamine.","definition_xrefs":["PMID:9874228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylamine methyltransferase activity","secondary_identifiers":["EC:2.1.1.249","MetaCyc:RXN-8100","RHEA:41175"],"synonyms":[{"name":"DMA methyltransferase 1","type":"exact"},{"name":"DMAMT 1","type":"exact"},{"name":"MT1","type":"broad"},{"name":"dimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"dimethylamine:corrinoid methyltransferase activity","type":"exact"},{"name":"mtbB1","type":"related"}],"termid":"GO:0043791"}


id: PBO:0084354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS, contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, present in strains with Sigma1278b background; located on left arm of Chr X ~ 15 kb from telomere; identical to MPR1 except for one base at position 254, leading to Gly at position 85 in MPR1 and Glu in MPR2; present also in Japanese industrial baker's yeast","termid":"PBO:0084354"}


id: PBO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Hrp1","termid":"PBO:0001404"}


id: GO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular capillary formation","termid":"GO:0072104"}


id: PR:Q10407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mkh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase mkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.02c","synonyms":[{"name":"Spom972h-mkh1","type":"exact"}],"termid":"PR:Q10407"}


id: MONDO:0011617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthropathy, erosive","secondary_identifiers":["OMIM:605935","MESH:C565273","UMLS:C1853829","MEDGEN:342978"],"synonyms":[{"name":"arthropathy, erosive","type":"exact"}],"termid":"MONDO:0011617","xrefs":{"Monarch":{"xref_id":"0011617"}}}


id: SO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_UTR","synonyms":[{"name":"internal UTR","type":"exact"}],"termid":"SO:0000241"}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: GO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031630"}


id: PBO:0059238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11","termid":"PBO:0059238"}


id: PBO:0072713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 2","termid":"PBO:0072713"}


id: MONDO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blistering, acantholytic, of oral and laryngeal mucosa","secondary_identifiers":["OMIM:619226","MEDGEN:1785588","UMLS:C5543184"],"synonyms":[{"name":"ABOLM","type":"exact"}],"termid":"MONDO:0030986","xrefs":{"Monarch":{"xref_id":"0030986"}}}


id: MONDO:0016970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of chromosome 20","termid":"MONDO:0016938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 20","secondary_identifiers":["GARD:20890","icd11.foundation:1196484734","MEDGEN:1826031","Orphanet:262995","UMLS:C5679695"],"synonyms":[{"name":"partial duplication of chromosome 20q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 20","type":"exact"},{"name":"partial trisomy of chromosome 20q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 20","type":"exact"}],"termid":"MONDO:0016970","xrefs":{"Monarch":{"xref_id":"0016970"}}}


id: PBO:0065653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRD divergent transcript","termid":"PBO:0065653"}


id: GO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell migration","synonyms":[{"name":"down regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"downregulation of blood vessel endothelial cell migration","type":"exact"},{"name":"inhibition of blood vessel endothelial cell migration","type":"narrow"}],"termid":"GO:0043537"}


id: PBO:0063063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK2 antisense RNA 1","termid":"PBO:0063063"}


id: PBO:0038747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 2","termid":"PBO:0038747"}


id: FYPO:0001007
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118768],"is_not":false,"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitosis","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitosis: normal","type":"exact"},{"name":"normal mitosis during mitotic cell cycle","type":"related"},{"name":"normal mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001007","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0048979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 2 like","termid":"PBO:0048979"}


id: MONDO:0014174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any renal-hepatic-pancreatic dysplasia in which the cause of the disease is a mutation in the NEK8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal-hepatic-pancreatic dysplasia","termid":"MONDO:0017417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-hepatic-pancreatic dysplasia 2","secondary_identifiers":["MEDGEN:815764","OMIM:615415","GARD:18432","UMLS:C3809434"],"synonyms":[{"name":"NEK8 renal-hepatic-pancreatic dysplasia","type":"exact"},{"name":"RHPD2","type":"related"},{"name":"renal-hepatic-pancreatic dysplasia 2","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia caused by mutation in NEK8","type":"exact"},{"name":"renal-hepatic-pancreatic dysplasia type 2","type":"exact"}],"termid":"MONDO:0014174","xrefs":{"Monarch":{"xref_id":"0014174"}}}


id: PBO:0083100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress","termid":"PBO:0083100"}


id: FYPO:0005158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->6)-beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall beta-glucan level","termid":"FYPO:0001082"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell wall (1->6)-beta-D-glucan level","synonyms":[{"name":"decreased cell wall (1->6)-beta-D-glucan accumulation","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall (1->6)-beta-D-glucan level","type":"exact"}],"termid":"FYPO:0005158"}


id: PBO:0043410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 7","termid":"PBO:0043410"}


id: PR:Q09728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cuf1 gene.","definition_xrefs":["UniProtKB:Q09728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-binding regulatory protein cuf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.11c","synonyms":[{"name":"Spom972h-cuf1","type":"exact"}],"termid":"PR:Q09728"}


id: GO:1905214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of RNA binding (obsolete GO:1905214)","termid":"GO:1905214"}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_03813","SJAG_03471","SJAG_00947","SJAG_03909","SJAG_01524","SJAG_02741"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[78668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[105142,113015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[105143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[115369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[105144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[73515,77101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","EC:6.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PBO:0059483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase A","termid":"PBO:0059483"}


id: PBO:0077749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOLLIP divergent transcript","termid":"PBO:0077749"}


id: PBO:0038411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-term_tracker_item","termid":"PBO:0038411"}


id: PBO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1522","termid":"PBO:0052324"}


id: GO:0017128
data:
  {"annotated_genes":["SJAG_03100","SJAG_03076","SJAG_01470"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74992,100944,103122],"is_not":false,"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, by an ATP-independent mechanism.","definition_xrefs":["GOC:cjm","PMID:20043909","PMID:20302864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01470":null,"SJAG_03076":null,"SJAG_03100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phospholipid scramblase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017128","terms_by_termid":{"GO:0017128":null}}


id: GO:0061103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a glomus cell of the carotid body. The carotid body is a specialized chemosensory organ that helps respond to hypoxia.","definition_xrefs":["PMID:6243386","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carotid body glomus cell differentiation","termid":"GO:0061103"}


id: PBO:0028363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_cell","termid":"PBO:0028363"}


id: MONDO:0019289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation of the skin","secondary_identifiers":["Orphanet:79375","SCTID:49765009","UMLS:C0162834","HP:0000953","MEDGEN:57992","ICD9:709.09"],"termid":"MONDO:0019289","xrefs":{"Monarch":{"xref_id":"0019289"}}}


id: MONDO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular thyroid adenoma (obsolete MONDO:0003807)","termid":"MONDO:0003807","xrefs":{"Monarch":{"xref_id":"0003807"}}}


id: GO:0090335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell differentiation","secondary_identifiers":["Reactome:R-HSA-9843743"],"termid":"GO:0090335"}


id: PBO:0077341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 80","termid":"PBO:0077341"}


id: PBO:0050396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 1","termid":"PBO:0050396"}


id: MONDO:0016203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"},{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypercholesterolemia due to cholesterol 7alpha-hydroxylase deficiency","secondary_identifiers":["Orphanet:209902","GARD:20441","MEDGEN:1653798","UMLS:C4751204"],"termid":"MONDO:0016203","xrefs":{"Monarch":{"xref_id":"0016203"}}}


id: GO:0008424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->6)]-N-acetyl-beta-D-glucosaminyl}asparagine + GDP + H+.","definition_xrefs":["RHEA:12985","EC:2.4.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->6)-fucosyltransferase activity","termid":"GO:0046921"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 6-alpha-L-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1028788","KEGG_REACTION:R05988","Reactome:R-HSA-9696980","MetaCyc:2.4.1.68-RXN"],"synonyms":[{"name":"FucT","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDP-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDPfucose-glycoprotein fucosyltransferase activity","type":"related"},{"name":"glycoprotein fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose--glycoprotein fucosyltransferase activity","type":"related"}],"termid":"GO:0008424"}


id: PBO:0048724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 6 domain containing 1","termid":"PBO:0048724"}


id: GO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA exonuclease activity, producing 3'-phosphomonoesters (obsolete GO:0016897)","synonyms":[{"name":"exoribonuclease activity, producing 3'-phosphomonoesters","type":"exact"}],"termid":"GO:0016897"}


id: PBO:0053413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 351","termid":"PBO:0053413"}


id: PBO:0110023
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Social Distancing Gene","termid":"PBO:0110023"}


id: MONDO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroma","termid":"MONDO:0002173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple mucosal neuroma","secondary_identifiers":["MEDGEN:233722","DOID:5155","NCIT:C6559","UMLS:C1334828"],"synonyms":[{"name":"multiple mucosal neuromas","type":"related"}],"termid":"MONDO:0003307","xrefs":{"Monarch":{"xref_id":"0003307"}}}


id: FYPO:0002512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein palmitoylation during meiosis","synonyms":[{"name":"decreased protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"reduced protein palmitoylation during meiosis","type":"exact"}],"termid":"FYPO:0002512"}


id: FYPO:0004390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more arginine catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Arginine catabolism RNAs are transcribed from genes whose products are involved in arginine catabolism.","definition_xrefs":["PomBase:mah","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid catabolism gene mRNA during vegetative growth","termid":"FYPO:0004389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of arginine catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased arginine catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of arginine catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of arginine catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of arginine catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004390"}


id: FYECO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which adenine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited adenine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000021"}


id: PBO:0054891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2305","termid":"PBO:0054891"}


id: PBO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 2","termid":"PBO:0043773"}


id: GO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a Langerhans cell in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:16056255","PMID:16387601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell chemotaxis","termid":"GO:0002409"}


id: PBO:0062613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 1","termid":"PBO:0062613"}


id: MONDO:0024884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that has spread to the bone from another, primary anatomic site. Bone is one of the most frequent sites of metastatic carcinoma. Common sites of origin include lung, breast, and prostate.","definition_xrefs":["NCIT:C36082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"metastatic carcinoma","termid":"MONDO:0024879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic carcinoma in the bone","secondary_identifiers":["UMLS:C0700110","MEDGEN:195970"],"synonyms":[{"name":"metastatic carcinoma in the bone","type":"exact"},{"name":"metastatic carcinoma to the bone","type":"exact"}],"termid":"MONDO:0024884","xrefs":{"Monarch":{"xref_id":"0024884"}}}


id: GO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum is received and converted into a molecular signal.","definition_xrefs":["PMID:10390516","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER overload response","termid":"GO:0006983"},{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"detection of endoplasmic reticulum overloading","synonyms":[{"name":"detection of ER overloading","type":"exact"}],"termid":"GO:0002234"}


id: PBO:0041659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 4","termid":"PBO:0041659"}


id: GO:0140803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + NAD+ = H+ + nicotinamide + S-(ADP-D-ribosyl)-L-cysteinyl-[protein].","definition_xrefs":["RHEA:56612","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD+-protein-cysteine ADP-ribosyltransferase activity","termid":"GO:0140803"}


id: PBO:0040646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1B","termid":"PBO:0040646"}


id: MONDO:0015585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic late-onset epileptic spasms is a rare epilepsy syndrome characterized by late-onset (after 1 year old) epileptic spasms that occur in clusters, associated with tonic seizures, atypical absences and cognitive deterioration. Language difficulties and behavior problems are frequently present. EEG is characterized by a temporal, or temporofrontal, slow wave or spike focus combined with synchronous spike-waves and no hypsarrhythmia or background activity.","definition_xrefs":["Orphanet:163708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"cryptogenic late-onset epileptic spasms","secondary_identifiers":["icd11.foundation:457378168","MEDGEN:1666207","UMLS:C4755310","GARD:20050"],"synonyms":[{"name":"late-onset infantile spasms","type":"exact"}],"termid":"MONDO:0015585","xrefs":{"Monarch":{"xref_id":"0015585"}}}


id: PBO:0039926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 28","termid":"PBO:0039926"}


id: GO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replicative cell aging (obsolete GO:0001302)","synonyms":[{"name":"replicative cell ageing","type":"exact"}],"termid":"GO:0001302"}


id: GO:0038080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in osmosensory signaling pathway (obsolete GO:0038080)","synonyms":[{"name":"MAP kinase kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAP2K activity involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038080"}


id: PBO:0080286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 49 pseudogene","termid":"PBO:0080286"}


id: MONDO:0015998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated ectopia lentis (IEL) is a rare, clinically variable, eye disorder characterized by dislocation of the lens, often causing significant reduction in visual acuity.","definition_xrefs":["Orphanet:1885"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"},{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated ectopia lentis","secondary_identifiers":["NCIT:C34566","GARD:12251","MEDGEN:342716","MESH:C536184","MedDRA:10014145","SCTID:74969002","DOID:0111148","UMLS:C1851286","PMID:20141359"],"synonyms":[{"name":"IEL","type":"exact"},{"name":"congenital ectopic lens","type":"related"},{"name":"ectopia lentis syndrome","type":"exact"},{"name":"familial ectopia lentis","type":"exact"},{"name":"isolated lens position anomaly","type":"exact"},{"name":"nonsyndromic lens position anomaly","type":"exact"}],"termid":"MONDO:0015998","xrefs":{"Monarch":{"xref_id":"0015998"}}}


id: PR:C6Y4A5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6F6.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.19","synonyms":[{"name":"Spom972h-SPAC6F6.19","type":"exact"}],"termid":"PR:C6Y4A5"}


id: PBO:0066449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 1, pseudogene","termid":"PBO:0066449"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632","SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79627,102284],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: GO:2000710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000710"}


id: PBO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 1","termid":"PBO:0061557"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["GOC:BHF","PMID:21123617","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen-containing extracellular matrix (obsolete GO:0062023)","synonyms":[{"name":"collagen-containing ECM","type":"exact"}],"termid":"GO:0062023"}


id: MOD:00879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["PubMed:2081203","Unimod:457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthalene-2,3-dicarboxaldehyde","synonyms":[{"name":"NDA","type":"related"},{"name":"naphthalene-2,3-dicarboxaldehyde","type":"related"}],"termid":"MOD:00879"}


id: PBO:0040116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 3","termid":"PBO:0040116"}


id: PBO:0116634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 6","termid":"PBO:0116634"}


id: GO:1904013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to xenon atom.","definition_xrefs":["GO_REF:0000067","PMID:10089464","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete xenon atom binding (obsolete GO:1904013)","termid":"GO:1904013"}


id: MONDO:0013016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type III (LAD-III) is a form of LAD characterized by both severe bacterial infections and a severe bleeding disorder.","definition_xrefs":["Orphanet:99844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 3","secondary_identifiers":["GARD:16915","OMIM:612840","MEDGEN:411605","DOID:0110912","UMLS:C2748536","MESH:C567555"],"synonyms":[{"name":"FERMT3 leukocyte adhesion deficiency","type":"exact"},{"name":"IADD","type":"exact"},{"name":"LAD-III","type":"exact"},{"name":"LAD1 variant","type":"exact"},{"name":"LAD1V","type":"exact"},{"name":"LAD3","type":"exact"},{"name":"integrin Activation deficiency disease","type":"related"},{"name":"integrin activation deficiency disease","type":"exact"},{"name":"lad-1 variant","type":"exact"},{"name":"lad-III","type":"exact"},{"name":"leukocyte adhesion deficiency 1 variant","type":"exact"},{"name":"leukocyte adhesion deficiency 3","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in FERMT3","type":"exact"},{"name":"leukocyte adhesion deficiency type 3","type":"exact"},{"name":"leukocyte adhesion deficiency type III","type":"exact"},{"name":"leukocyte adhesion deficiency, type 3","type":"related"},{"name":"leukocyte adhesion deficiency, type III","type":"related"},{"name":"leukocyte adhesion deficiency-1 variant","type":"exact"}],"termid":"MONDO:0013016","xrefs":{"Monarch":{"xref_id":"0013016"}}}


id: PBO:0091457
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of A Kinase","termid":"PBO:0091457"}


id: PR:Q09820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00313","PRO:DNx","PANTHER:PTHR10887:SF26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.06c","secondary_identifiers":["UniProtKB:Q09820"],"synonyms":[{"name":"Spom972h-UPF1","type":"exact"},{"name":"nonsense-mediated mRNA decay protein upf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulator of nonsense transcripts 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"up-frameshift suppressor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09820"}


id: MONDO:0010152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichomegaly-retina pigmentary degeneration-dwarfism syndrome, also known as Oliver-McFarlane syndrome, is an extremely rare genetic disorder characterized by hair abnormalities, severe chorioretinal atrophy, hypopituitarism, short stature, and intellectual disability.","definition_xrefs":["Orphanet:3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichomegaly-retina pigmentary degeneration-dwarfism syndrome","secondary_identifiers":["DOID:0111271","GARD:5266","OMIM:275400","MEDGEN:338532","SCTID:719944006","MESH:C536554","UMLS:C1848745"],"synonyms":[{"name":"OMCS","type":"related"},{"name":"Oliver McFarlane syndrome","type":"related"},{"name":"Oliver-McFarlane syndrome","type":"exact"},{"name":"eyelashes, long with intellectual disability","type":"related"},{"name":"eyelashes, long, with intellectual disability","type":"related"},{"name":"eyelashes, long, with mental retardation","type":"related"},{"name":"long eyelashes-intellectual disability syndrome","type":"exact"},{"name":"trichomegaly with intellectual disability, dwarfism and pigmentary degeneration of retina","type":"related"},{"name":"trichomegaly with intellectual disability, dwarfism, and pigmentary Degeneration of retina","type":"related"},{"name":"trichomegaly with mental retardation, dwarfism, and pigmentary Degeneration of retina","type":"related"}],"termid":"MONDO:0010152","xrefs":{"Monarch":{"xref_id":"0010152"}}}


id: PBO:0073990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 4","termid":"PBO:0073990"}


id: MONDO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic, slow growing, well differentiated and non-metastasizing squamous cell carcinoma with pushing margins that arises from the subglottic area of the larynx.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx verrucous carcinoma","termid":"MONDO:0002766"},{"relation_name":"is_a","term_name":"subglottis squamous cell carcinoma","termid":"MONDO:0004291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis verrucous carcinoma","secondary_identifiers":["NCIT:C8190","MEDGEN:124721","DOID:7584","UMLS:C0280330"],"synonyms":[{"name":"subglottic verrucous carcinoma","type":"exact"},{"name":"subglottis verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of subglottis","type":"exact"},{"name":"verrucous carcinoma of the subglottis","type":"related"}],"termid":"MONDO:0004290","xrefs":{"Monarch":{"xref_id":"0004290"}}}


id: GO:1903101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:19037259","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol catabolic process","termid":"GO:0031161"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate breakdown","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1903101"}


id: MONDO:0975797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities","secondary_identifiers":["OMIM:620939"],"termid":"MONDO:0975797","xrefs":{"Monarch":{"xref_id":"0975797"}}}


id: PBO:0069484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 751, pseudogene","termid":"PBO:0069484"}


id: PBO:0072137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 14","termid":"PBO:0072137"}


id: MONDO:0800107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anterior deviation infundibular septum","secondary_identifiers":["SCTID:448619007","MEDGEN:756812","UMLS:C3164404"],"termid":"MONDO:0800107","xrefs":{"Monarch":{"xref_id":"0800107"}}}


id: PBO:0086858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA exonuclease; possibly involved in pre-rRNA processing and ribosome assembly","termid":"PBO:0086858"}


id: PBO:0053623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 665","termid":"PBO:0053623"}


id: PBO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_resulting_in_complete_rereplication,_with_mitotic_cell_cycle_arrest","termid":"PBO:0036224"}


id: PBO:0031452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution","termid":"PBO:0031452"}


id: PBO:0065458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 4 pseudogene 1","termid":"PBO:0065458"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: MONDO:0020244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","secondary_identifiers":["Orphanet:98666"],"termid":"MONDO:0020244","xrefs":{"Monarch":{"xref_id":"0020244"}}}


id: GO:0071331
data:
  {"annotated_genes":["SJAG_01254","SJAG_02444","SJAG_03081","SJAG_01754","SJAG_00472","SJAG_01699","SJAG_04312","SJAG_00574","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116167,93705,105452,109091,106048,108580,101373,106398,115134],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hexose stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071331","terms_by_termid":{"GO:0010619":null}}


id: GO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite catabolic process","synonyms":[{"name":"secondary metabolite breakdown","type":"exact"},{"name":"secondary metabolite catabolism","type":"exact"},{"name":"secondary metabolite degradation","type":"exact"}],"termid":"GO:0090487"}


id: PBO:0059079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 2","termid":"PBO:0059079"}


id: PBO:0017513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transmembrane transporter inducer Gti1","termid":"PBO:0017513"}


id: GO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + ATP + holo-[ACP] = 2,3-dihydroxybenzoyl-[ACP] + AMP + diphosphate.","definition_xrefs":["RHEA:61652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate--[aryl-carrier protein] ligase","secondary_identifiers":["MetaCyc:RXN-19445","EC:6.2.1.71","KEGG_REACTION:R12777"],"synonyms":[{"name":"(2,3-dihydroxybenzoyl)adenylate synthase activity","type":"narrow"},{"name":"2,3-dihydroxybenzoate-AMP ligase activity","type":"narrow"}],"termid":"GO:0008668"}


id: GO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The colorless and basic protein moiety of hemoglobin and myoglobins.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete globin (obsolete GO:0001524)","synonyms":[{"name":"globin","type":"exact"}],"termid":"GO:0001524"}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: PBO:0061564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' nucleotidase, ecto-like, pseudogene","termid":"PBO:0061564"}


id: PBO:0089518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, minus-end directed microtubule motor Dhc1","termid":"PBO:0089518"}


id: PBO:0067528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 672, pseudogene","termid":"PBO:0067528"}


id: MONDO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic neutrophilic leukemia (obsolete MONDO:0000896)","termid":"MONDO:0000896","xrefs":{"Monarch":{"xref_id":"0000896"}}}


id: PBO:0057630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1205","termid":"PBO:0057630"}


id: GO:0097228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.","definition_xrefs":["GOC:cjm","MP:0009836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm principal piece","termid":"GO:0097228"}


id: GO:2001253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K36 trimethylation.","definition_xrefs":["PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K36 trimethylation (obsolete GO:2001253)","termid":"GO:2001253"}


id: FYPO:0007496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear exosome focus at the sme2 locus does not occur. Other nuclear exosome foci may form normally.","definition_xrefs":["PomBase:mah","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nuclear exosome focus","termid":"FYPO:0003042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nuclear exosome focus at sme2 locus","synonyms":[{"name":"abolished protein localisation to nuclear exosome focus at sme2 locus","type":"exact"},{"name":"abolished protein localization to Mmi1 nuclear focus at sme2 locus","type":"exact"},{"name":"abolished protein localization to nuclear exosome focus at sme2 locus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear exosome focus at sme2 locus during vegetative growth","type":"exact"}],"termid":"FYPO:0007496"}


id: GO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cobalt-factor II = S-adenosyl-L-homocysteine + cobalt-factor III.","definition_xrefs":["EC:2.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cobalt-factor II C20-methyltransferase activity","secondary_identifiers":["RHEA:17997","MetaCyc:RXN-8760"],"synonyms":[{"name":"CbiL","type":"narrow"},{"name":"S-adenosyl-L-methionine:cobalt-factor-II C20-methyltransferase activity","type":"related"},{"name":"cobalt-factor II C20 methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-2 C(20)-methyltransferase activity","type":"related"}],"termid":"GO:0043781"}


id: SO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which changes polypeptide functioning with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_function_variant","synonyms":[{"name":"polypeptide function variant","type":"exact"}],"termid":"SO:0001554"}


id: PBO:0059999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 19","termid":"PBO:0059999"}


id: GO:0008941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NO + 2 O2 + NAD(P)H + H+ = 2 nitrate + NAD(P)+.","definition_xrefs":["EC:1.14.12.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitric oxide dioxygenase NAD(P)H activity","secondary_identifiers":["Reactome:R-HSA-1222723","MetaCyc:R621-RXN"],"synonyms":[{"name":"NOD activity","type":"related"},{"name":"nitric oxide dioxygenase activity","type":"broad"}],"termid":"GO:0008941"}


id: PBO:0028615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ADP_binding","termid":"PBO:0028615"}


id: GO:0120095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle membrane contact site formed at the junction of the vacuolar membrane and the isolation membrane or phagophore in response to starvation or other stresses, leading to the formation of the autophagosome.","definition_xrefs":["PMID:23549786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-isolation membrane contact site","synonyms":[{"name":"VICS","type":"related"},{"name":"vacuole-IM contact site","type":"exact"},{"name":"vacuole-phagophore contact site","type":"exact"}],"termid":"GO:0120095"}


id: MONDO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0019254","MONDO:0005015","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 2","secondary_identifiers":["MEDGEN:1713823","OMIM:618856","GARD:16388","UMLS:C5394296"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 2","type":"exact"},{"name":"Developmental Delay, Epilepsy, and Neonatal Diabetes 1","type":"exact"},{"name":"PNDM2","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 2","type":"exact"},{"name":"diabetes, permanent neonatal 2, with or without neurologic features","type":"exact"}],"termid":"MONDO:0030087","xrefs":{"Monarch":{"xref_id":"0030087"}}}


id: MONDO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of multiple capillary malformations (CM) with an arteriovenous malformation (AVM) and arteriovenous fistulas.","definition_xrefs":["Orphanet:137667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary malformation-arteriovenous malformation syndrome","secondary_identifiers":["GARD:11904","MEDGEN:334007","ICD9:747.69","SCTID:703533007","NCIT:C179668","OMIMPS:608354","MESH:C564254","UMLS:C1842180"],"synonyms":[{"name":"CM-AVM","type":"exact"},{"name":"CM-AVM syndrome","type":"related"},{"name":"CMAVM","type":"related"},{"name":"capillary malformation without arteriovenous malformation","type":"related"},{"name":"capillary malformation-arteriovenous malformation","type":"related"}],"termid":"MONDO:0012016","xrefs":{"Monarch":{"xref_id":"0012016"}}}


id: PBO:0083901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flap-structured DNA-binding and RNA-binding protein; stimulates deadenylation-dependent mRNA degradation mediated by the CCR4-NOT deadenylase complex; member of the Smaug (Smg) family of post-transcriptional regulators which bind RNA through a conserved sterile alpha motif (SAM) domain that interacts with Smg recognition element (SREs) containing transcripts; stimulates Dna2p endonuclease activity; forms [SMAUG+] prion","termid":"PBO:0083901"}


id: PBO:0067589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 750, pseudogene","termid":"PBO:0067589"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: GO:0035265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.","definition_xrefs":["GOC:bf","ISBN:0471245208","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ growth","termid":"GO:0035265"}


id: GO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage fusion","termid":"GO:0034239"}


id: GO:1900999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitrobenzene.","definition_xrefs":["UniPathway:UPA00923","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitrobenzene metabolic process","termid":"GO:0018916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene biosynthetic process","synonyms":[{"name":"nitrobenzene anabolism","type":"exact"},{"name":"nitrobenzene biosynthesis","type":"exact"},{"name":"nitrobenzene formation","type":"exact"},{"name":"nitrobenzene synthesis","type":"exact"}],"termid":"GO:1900999"}


id: PBO:0066216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 12","termid":"PBO:0066216"}


id: GO:0052176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host glucan (obsolete GO:0052176)","termid":"GO:0052176"}


id: PBO:0065466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 8","termid":"PBO:0065466"}


id: PBO:0084855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation","termid":"PBO:0084855"}


id: PBO:0025471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-L ortholog Fta1","termid":"PBO:0025471"}


id: PATO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increase in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficacy","termid":"PATO:0015004"}


id: PBO:0056874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence D (pseudogene)","termid":"PBO:0056874"}


id: PBO:0072541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 71","termid":"PBO:0072541"}


id: PBO:0031029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_organization","termid":"PBO:0031029"}


id: GO:0034476
data:
  {"annotated_genes":["SJAG_02993","SJAG_00081","SJAG_04818","SJAG_04084","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73075,73370,74197,89443,98452],"is_not":false,"summary":null,"term":"GO:0034476"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U5 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_02993":null,"SJAG_04084":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"U5 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"U5 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034476","terms_by_termid":{"GO:0034476":null}}


id: PBO:0036276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator HCNGP-like (predicted)","termid":"PBO:0036276"}


id: PR:Q09767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11711:SF26","PRO:DNx","OMA:SCHPO00273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-like protein alp41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.05c","secondary_identifiers":["UniProtKB:Q09767"],"synonyms":[{"name":"Spom972h-ARL2","type":"exact"},{"name":"altered polarity protein 41 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09767"}


id: GO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule metabolic process (obsolete GO:0044260)","synonyms":[{"name":"cellular biopolymer metabolic process","type":"exact"},{"name":"cellular macromolecule metabolism","type":"exact"}],"termid":"GO:0044260"}


id: GO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast ADPG pyrophosphorylase complex","termid":"GO:0030933"}


id: MONDO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","secondary_identifiers":["MEDGEN:340877","MESH:C565427","OMIM:247800","UMLS:C1855470"],"synonyms":[{"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","type":"exact"}],"termid":"MONDO:0009541","xrefs":{"Monarch":{"xref_id":"0009541"}}}


id: PBO:0071789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P and MRP subunit p25","termid":"PBO:0071789"}


id: GO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + p-cymene + 2 reduced [2Fe-2S]-[ferredoxin] = 4-isopropylbenzyl alcohol + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:51604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"p-cymene methyl hydroxylase activity","secondary_identifiers":["EC:1.14.15.25","UM-BBD_reactionID:r0392","MetaCyc:RXN-661"],"termid":"GO:0018694"}


id: PBO:0004678
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.193","termid":"PBO:0004678"}


id: GO:0003724
data:
  {"annotated_genes":["SJAG_03923","SJAG_04081","SJAG_05276","SJAG_00597","SJAG_03479","SJAG_00786","SJAG_04772","SJAG_04230","SJAG_04650","SJAG_00986","SJAG_00798","SJAG_01182","SJAG_00616","SJAG_00583","SJAG_03730","SJAG_01499","SJAG_02061","SJAG_03193","SJAG_16455","SJAG_03077","SJAG_04118","SJAG_03533","SJAG_02686","SJAG_01315","SJAG_04589","SJAG_03157","SJAG_04669","SJAG_03886","SJAG_02382","SJAG_01152","SJAG_04480","SJAG_02558","SJAG_00898","SJAG_02835","SJAG_04974","SJAG_02242","SJAG_02287","SJAG_05025","SJAG_02991","SJAG_02295","SJAG_02879","SJAG_03897","SJAG_00887"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57197,57771,58079,59042,60549,60923,62032,62589,63072,64579,66437,69038,70947,73568,73578,73720,75839,75899,77174,77212,77279,77293,77984,78906,80481,80834,80980,81513,82231,87231,95496,98848,100156,100940,102662,103063,106834,107353,115029,115968,118303],"is_not":false,"summary":null,"term":"GO:0003724"},{"annotations":[75901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[99403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"}]},"cv_name":"molecular_function","definition":"Unwinding of an RNA helix, driven by ATP hydrolysis.","definition_xrefs":["GOC:jl","PMID:19158098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00583":null,"SJAG_00597":null,"SJAG_00616":null,"SJAG_00786":null,"SJAG_00798":null,"SJAG_00887":null,"SJAG_00898":null,"SJAG_00986":null,"SJAG_01152":null,"SJAG_01182":null,"SJAG_01315":null,"SJAG_01499":null,"SJAG_02061":null,"SJAG_02242":null,"SJAG_02287":null,"SJAG_02295":null,"SJAG_02382":null,"SJAG_02558":null,"SJAG_02686":null,"SJAG_02835":null,"SJAG_02879":null,"SJAG_02991":null,"SJAG_03077":null,"SJAG_03157":null,"SJAG_03193":null,"SJAG_03479":null,"SJAG_03533":null,"SJAG_03730":null,"SJAG_03886":null,"SJAG_03897":null,"SJAG_03923":null,"SJAG_04081":null,"SJAG_04118":null,"SJAG_04230":null,"SJAG_04480":null,"SJAG_04589":null,"SJAG_04650":null,"SJAG_04669":null,"SJAG_04772":null,"SJAG_04974":null,"SJAG_05025":null,"SJAG_05276":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA helicase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-72647","GO:0004004","EC:3.6.4.13","Reactome:R-HSA-9770141","Reactome:R-HSA-9770145","MetaCyc:RXN-11109","Reactome:R-HSA-9770131","Reactome:R-HSA-9770142","Reactome:R-HSA-9770129"],"synonyms":[{"name":"ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0003724","terms_by_termid":{"GO:0003724":null,"GO:0032574":null,"GO:0034458":null}}


id: MONDO:0011863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer aggressiveness quantitative trait locus on chromosome 19","secondary_identifiers":["OMIM:607592","MEDGEN:334432","UMLS:C1843533"],"synonyms":[{"name":"HPCqtl19","type":"related"},{"name":"prostate cancer aggressiveness QTL","type":"exact"},{"name":"prostate cancer aggressiveness quantitative trait locus on chromosome 19","type":"exact"},{"name":"prostate cancer aggressiveness quantitative trait locus on chromosome type 19","type":"exact"}],"termid":"MONDO:0011863","xrefs":{"Monarch":{"xref_id":"0011863"}}}


id: RO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits","termid":"RO:0002618"}


id: PBO:0059416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 2","termid":"PBO:0059416"}


id: FYPO:0000642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal chromatin organization","synonyms":[{"name":"abnormal chromatin organisation","type":"exact"}],"termid":"FYPO:0000642"}


id: PBO:0068900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 142, pseudogene","termid":"PBO:0068900"}


id: PBO:0031618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposition","termid":"PBO:0031618"}


id: PBO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5 (predicted)","termid":"PBO:0004217"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0039734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOC4-APOC2 readthrough (NMD candidate)","termid":"PBO:0039734"}


id: GO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000429"}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: MONDO:0009730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephrosialidosis (obsolete MONDO:0009730)","termid":"MONDO:0009730","xrefs":{"Monarch":{"xref_id":"0009730"}}}


id: PBO:0076197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 6","termid":"PBO:0076197"}


id: PBO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013231"}


id: PBO:0056724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylphosphate capping enzyme","termid":"PBO:0056724"}


id: MONDO:1010923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, Duchenne type, non-human animal","termid":"MONDO:1010199"},{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, dog","secondary_identifiers":["OMIA:001081-9615"],"termid":"MONDO:1010923","xrefs":{"Monarch":{"xref_id":"1010923"}}}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0067327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 418, pseudogene","termid":"PBO:0067327"}


id: MONDO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease in which the cause of the disease is a mutation in the GATA4 gene.","definition_xrefs":["PMID:18672102","PMID:22101736","PMID:28991257","MONDO:patterns/disease_series_by_gene","PMID:15810002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"structural congenital heart disease, multiple types - GATA4","termid":"MONDO:0100009","xrefs":{"Monarch":{"xref_id":"0100009"}}}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10977:SF2","OMA:SCHPO01270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: GO:0015949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a nucleobase, nucleoside or nucleotide small molecule is synthesized from another nucleobase, nucleoside or nucleotide small molecule.","definition_xrefs":["ISBN:0306444747","ISBN:0471394831","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleobase-containing small molecule interconversion","secondary_identifiers":["Reactome:R-HSA-499943"],"termid":"GO:0015949"}


id: PBO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.14","termid":"PBO:0000695"}


id: PBO:0067352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 449, pseudogene","termid":"PBO:0067352"}


id: PBO:0062688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 9 pseudogene","termid":"PBO:0062688"}


id: MONDO:0003123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple system atrophy (obsolete MONDO:0003123)","termid":"MONDO:0003123","xrefs":{"Monarch":{"xref_id":"0003123"}}}


id: MONDO:0017592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxemia","secondary_identifiers":["MedDRA:10041932","UMLS:C0854511","MEDGEN:799765","Orphanet:300579","GARD:21239"],"termid":"MONDO:0017592","xrefs":{"Monarch":{"xref_id":"0017592"}}}


id: GO:1990819
data:
  {"annotated_genes":["SJAG_01888","SJAG_01017","SJAG_00667","SJAG_00677","SJAG_05001","SJAG_00938","SJAG_02486","SJAG_02718","SJAG_03011","SJAG_03646","SJAG_04781","SJAG_03444","SJAG_03453","SJAG_01943","SJAG_01171","SJAG_03357","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87729,88553,90306,91984,93298,93494,94860,99060,99663,101466,101467,107625,107686,110895,114220,115774,118856],"is_not":false,"summary":null,"term":"GO:1990819"}]},"cv_name":"cellular_component","definition":"A focus at the mating projection tip where the cell wall is degraded during conjugation with cellular fusion. Actin filaments form an aster-like structure from this location.","definition_xrefs":["PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_02486":null,"SJAG_02718":null,"SJAG_03011":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03646":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"actin fusion focus","type":"broad"}],"termid":"GO:1990819","terms_by_termid":{"GO:1990819":null}}


id: PBO:0040608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAH domain and coiled-coil containing 1","termid":"PBO:0040608"}


id: PBO:0038532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 6, acylglycerol lipase","termid":"PBO:0038532"}


id: MONDO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormality characterized by elevation of the hemidiaphragm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic eventration","secondary_identifiers":["NCIT:C98912","UMLS:C0011981","HP:0009110","MESH:D003965","EFO:1000898","SCTID:34168003","DOID:10480","MEDGEN:8359"],"synonyms":[{"name":"diaphragmatic eventration","type":"exact"},{"name":"diaphragmatic eventration (disease)","type":"exact"}],"termid":"MONDO:0006726","xrefs":{"Monarch":{"xref_id":"0006726"}}}


id: PBO:0056615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1-associated factor 6 pseudogene 1","termid":"PBO:0056615"}


id: MONDO:0010064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mousa-AlDin-AlNassar syndrome is characterized by the presence of spastic ataxia in association with bilateral congenital cataract, corneal dystrophy, and nonaxial myopia.","definition_xrefs":["Orphanet:2572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"spastic ataxia-corneal dystrophy syndrome","secondary_identifiers":["UMLS:C1849085","GARD:3795","MEDGEN:336493","MESH:C536989","SCTID:715465001","OMIM:271320"],"synonyms":[{"name":"Bedouin spastic ataxia syndrome","type":"exact"},{"name":"Mousa Al din Al Nassar syndrome","type":"related"},{"name":"Mousa-Al Din-Al Nassar syndrome","type":"exact"},{"name":"spastic ataxia, macular corneal dystrophy, congenital cataracts, myopia and vertically oval temporally tilted discs","type":"related"},{"name":"spastic ataxia, macular corneal dystrophy, congenital cataracts, myopia and vertically oval temporally tilted disks","type":"related"},{"name":"spastic ataxia-ocular anomalies syndrome","type":"exact"},{"name":"spinocerebellar degeneration with macular corneal dystrophy, congenital cataracts, and myopia","type":"related"}],"termid":"MONDO:0010064","xrefs":{"Monarch":{"xref_id":"0010064"}}}


id: PBO:0025481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex2","termid":"PBO:0025481"}


id: _global:existence_ends_during_or_before
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during_or_before","secondary_identifiers":["RO:0002497"],"termid":"_global:existence_ends_during_or_before"}


id: PBO:0056570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCPH1 antisense RNA 1","termid":"PBO:0056570"}


id: SO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000310 predicted_ab_initio_computation (obsolete SO:0000310)","termid":"SO:0000310"}


id: PBO:0069232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 487, pseudogene","termid":"PBO:0069232"}


id: PBO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 7","termid":"PBO:0075195"}


id: PBO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_modification_during_vegetative_growth","termid":"PBO:0036118"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: PBO:0034598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology_during_meiosis_I","termid":"PBO:0034598"}


id: MONDO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Resorption in which cementum or dentin is lost from the root of a tooth owing to cementoclastic or osteoclastic activity in conditions such as trauma of occlusion or neoplasms. (Dorland, 27th ed)","definition_xrefs":["MESH:D012391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"root resorption","secondary_identifiers":["DOID:14550","MEDGEN:11268","UMLS:C0035851"],"termid":"MONDO:0001997","xrefs":{"Monarch":{"xref_id":"0001997"}}}


id: PBO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 25, pseudogene","termid":"PBO:0060586"}


id: MONDO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external pathological resorption","secondary_identifiers":["UMLS:C0266878","ICD9:521.42","MEDGEN:540236","SCTID:41918006","DOID:14529"],"termid":"MONDO:0001988","xrefs":{"Monarch":{"xref_id":"0001988"}}}


id: GO:0140592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H3)-arginine (position 8) = S-adenosyl-L-homocysteine + (histone H3-N-methyl-arginine (position 8). This reaction is the addition of a methyl group to the arginine residue at position 8 of histone H3.","definition_xrefs":["PMID:20708585","PMID:31533925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0008276","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3R8 methyltransferase activity","synonyms":[{"name":"histone H3R8 arginine methylase activity","type":"exact"},{"name":"histone H3R8 arginine methyltransferase activity","type":"exact"},{"name":"histone methyltransferase activity (H3-R8 specific)","type":"exact"},{"name":"histone-H3R8 methyltransferase activity","type":"exact"}],"termid":"GO:0140592"}


id: FYPO:0000607
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[118964,118962,118963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through M phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T 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id: GO:0099122
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id: GO:0032534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the formation of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus organization","termid":"GO:0032530"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of microvillus assembly","synonyms":[{"name":"regulation of microvillus biogenesis","type":"related"}],"termid":"GO:0032534"}


id: PBO:0000192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Asl1, predicted O-glucosyl hydrolase","termid":"PBO:0000192"}


id: PBO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036160"}


id: PBO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 4","termid":"PBO:0060856"}


id: PBO:0082689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA and TBP recruitment to target promoters and H3 acetylation","termid":"PBO:0082689"}


id: PBO:0030257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SAGA_complex_localization_to_promoter_region","termid":"PBO:0030257"}


id: PBO:0040861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLVRB pseudogene 1","termid":"PBO:0040861"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: MOD:01786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-nitro-L-tyrosine.","definition_xrefs":["ChEBI:44454","PubMed:5339594","PubMed:16944230","RESID:AA0537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrated L-tyrosine","termid":"MOD:01352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-nitro-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3-nitrophenyl)propanoic acid","type":"exact"},{"name":"3'-nitro-L-tyrosine","type":"exact"},{"name":"3-nitro-L-tyrosine","type":"exact"},{"name":"3-nitrotyrosine","type":"exact"},{"name":"MOD_RES 3'-Nitrotyrosine","type":"exact"},{"name":"m-nitrotyrosine","type":"exact"},{"name":"meta-nitrotyrosine","type":"exact"}],"termid":"MOD:01786"}


id: FYPO:0005073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal along the chromosome arms.","definition_xrefs":["PMID:21633354","GO:1990892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased mitotic chromosome arm condensation","synonyms":[{"name":"decreased chromosome arm condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome arm chromatin condensation","type":"exact"},{"name":"decreased mitotic chromosome arm condensation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome condensation along chromosome arms","type":"exact"},{"name":"reduced mitotic chromosome arm condensation","type":"exact"}],"termid":"FYPO:0005073"}


id: PBO:0055551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2987","termid":"PBO:0055551"}


id: PATO:0001964
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled spirally downwards.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circinate","termid":"PATO:0001964"}


id: PBO:0058627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6759","termid":"PBO:0058627"}


id: MONDO:0012071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the AGPAT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 1","secondary_identifiers":["DOID:0111135","GARD:84","OMIM:608594","UMLS:C1720862","MEDGEN:318592"],"synonyms":[{"name":"AGPAT2 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"AGPAT2-related Brunzell syndrome","type":"related"},{"name":"BSCL1","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 1","type":"related"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 1","type":"exact"},{"name":"Brunzell syndrome AGPAT2-related","type":"exact"},{"name":"Brunzell syndrome, AGPAT2-related","type":"related"},{"name":"CGL1","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in AGPAT2","type":"exact"},{"name":"congenital generalized lipodystrophy type 1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 1","type":"related"},{"name":"lipodystrophy, congenital generalized, type 1","type":"related"}],"termid":"MONDO:0012071","xrefs":{"Monarch":{"xref_id":"0012071"}}}


id: GO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-canadine + 2 NADP+ = berberine + H+ + 2 NADPH.","definition_xrefs":["EC:1.5.1.31","RHEA:21268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"berberine reductase activity","secondary_identifiers":["KEGG_REACTION:R07169","MetaCyc:1.5.1.31-RXN"],"synonyms":[{"name":"(R)-canadine synthase activity","type":"related"},{"name":"(R)-tetrahydroberberine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050623"}


id: GO:0061928
data:
  {"annotated_genes":["SJAG_00903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78408],"is_not":false,"summary":null,"term":"GO:0061928"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione = 5-oxoproline + L-cysteinylglycine.","definition_xrefs":["PMID:27913623","PMID:23070364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glutathione specific gamma-glutamylcyclotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.2.7","RHEA:47724"],"termid":"GO:0061928","terms_by_termid":{"GO:0061928":null}}


id: MONDO:1012096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia, non-human animal","termid":"MONDO:1011689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, cattle","secondary_identifiers":["OMIA:000430-9913"],"termid":"MONDO:1012096","xrefs":{"Monarch":{"xref_id":"1012096"}}}


id: MONDO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brooke-Spiegler syndrome (BSS) is an inherited predisposition syndrome presenting with skin appendage tumors, namely cylindromas, spiradenomas and trichoepitheliomas. A minority of patients can also get major and minor salivary glands neoplasms, usually membranous basal cell adenoma.","definition_xrefs":["Orphanet:79493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Brooke-Spiegler syndrome","secondary_identifiers":["UMLS:C1857941","SCTID:703531009","DOID:0050693","ICD9:239.2","OMIM:605041","NCIT:C205541","MEDGEN:346703","GARD:10179"],"synonyms":[{"name":"BRSS","type":"related"},{"name":"Brooke-Spiegler syndrome","type":"exact"},{"name":"Bss","type":"related"},{"name":"CYLD cutaneous syndrome","type":"exact"},{"name":"Spiegler-Brooke syndrome","type":"related"}],"termid":"MONDO:0011512","xrefs":{"Monarch":{"xref_id":"0011512"}}}


id: MONDO:1012701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy, type 3, dog","secondary_identifiers":["OMIA:001517-9615"],"synonyms":[{"name":"progressive retinal atrophy, X-linked, type 3, dog","type":"related"}],"termid":"MONDO:1012701","xrefs":{"Monarch":{"xref_id":"1012701"}}}


id: PBO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 61","termid":"PBO:0050358"}


id: PBO:0060904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 4","termid":"PBO:0060904"}


id: PBO:0038760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 5","termid":"PBO:0038760"}


id: SO:1000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variation that causes an increase in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000087 sequence_variation_increasing_level_of_transcript (obsolete SO:1000087)","synonyms":[{"name":"mutation increasing level of transcript","type":"exact"},{"name":"sequence variation increasing level of transcript","type":"exact"}],"termid":"SO:1000087"}


id: PBO:0065940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor for activated C kinase 1","termid":"PBO:0065940"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: MONDO:0858987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 82 (obsolete MONDO:0858987)","termid":"MONDO:0858987","xrefs":{"Monarch":{"xref_id":"0858987"}}}


id: GO:0033731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NAD(P)+ = L-tyrosine + NAD(P)H + CO2.","definition_xrefs":["EC:1.3.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arogenate dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:RXN-14476"],"synonyms":[{"name":"L-arogenate:NAD(P)+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033731"}


id: GO:0035015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in length of the aristal core. The arista is the terminal segment of the antenna and consists of a central core and a series of lateral extensions.","definition_xrefs":["GOC:bf","PMID:11404081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elongation of arista core","termid":"GO:0035015"}


id: MONDO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive systemic mastocytosis (obsolete MONDO:0003149)","termid":"MONDO:0003149","xrefs":{"Monarch":{"xref_id":"0003149"}}}


id: PBO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_filament-based_movement","termid":"PBO:0035826"}


id: MONDO:0011535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any split hand-foot malformation in which the cause of the disease is a mutation in the TP63 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 4","secondary_identifiers":["UMLS:C1854442","DOID:0090023","GARD:15378","MEDGEN:343120","MESH:C565344","OMIM:605289"],"synonyms":[{"name":"SHFM4","type":"exact"},{"name":"TP63 split hand-foot malformation","type":"exact"},{"name":"split hand-foot malformation caused by mutation in TP63","type":"exact"},{"name":"split hand-foot malformation type 4","type":"exact"},{"name":"split-hand/foot malformation 4","type":"related"},{"name":"split-hand/foot malformation type 4","type":"exact"}],"termid":"MONDO:0011535","xrefs":{"Monarch":{"xref_id":"0011535"}}}


id: SO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000106 non_capped_primary_transcript (obsolete SO:0000106)","termid":"SO:0000106"}


id: PBO:0078461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable B (pseudogene)","termid":"PBO:0078461"}


id: PBO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1 pseudogene 1","termid":"PBO:0046516"}


id: FYPO:0002171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a low temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at low temperature (obsolete FYPO:0002171)","synonyms":[{"name":"cell viable at low temperature","type":"exact"},{"name":"viable cell at low temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at low temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0002171"}


id: PBO:0017866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug168","termid":"PBO:0017866"}


id: PBO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 72","termid":"PBO:0048361"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: FYPO:0004827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell dies as it goes through mitosis, usually as a result of abnormal chromosome and spindle dynamics.","definition_xrefs":["PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with cell death during mitosis","synonyms":[{"name":"inviable cell with cell death during mitosis during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with cell death during mitosis during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with cell death during mitosis","type":"exact"}],"termid":"FYPO:0004827"}


id: PBO:0059096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 2","termid":"PBO:0059096"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: PBO:0085641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in late endosome to vacuole transport; cytoplasmic and vacuolar membrane protein; required for normal filament maturation during pseudohyphal growth; may function in targeting cargo proteins for degradation; interacts with Vta1p","termid":"PBO:0085641"}


id: PBO:0054186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1561","termid":"PBO:0054186"}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: PR:O14111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.15","synonyms":[{"name":"Spom972h-psd3","type":"exact"}],"termid":"PR:O14111"}


id: PBO:0069949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1242, pseudogene","termid":"PBO:0069949"}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[118892,118891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["GO:0000920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division during vegetative growth","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03143","SJAG_03444","SJAG_02252"],"single_locus_genotype_uniquenames":["ace2delta","agn1delta","sep1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: FYPO:0004297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more than one septum when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"multiseptate cell in stationary phase","termid":"FYPO:0004297"}


id: MONDO:1010863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, domestic guinea pig","secondary_identifiers":["OMIA:000625-10141"],"termid":"MONDO:1010863","xrefs":{"Monarch":{"xref_id":"1010863"}}}


id: GO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + AMP + diphosphate + perillyl-CoA.","definition_xrefs":["KEGG_REACTION:R06368","PMID:24952578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"perillic acid-CoA ligase (AMP-forming) activity","synonyms":[{"name":"perillic acid:CoA ligase (AMP-forming) activity","type":"exact"},{"name":"perillyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052686"}


id: PBO:0076219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite oxidase","termid":"PBO:0076219"}


id: PBO:0041040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 pseudogene 1","termid":"PBO:0041040"}


id: PBO:0062787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORC1 pseudogene 1","termid":"PBO:0062787"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: GO:1902052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(7)-dafachronate.","definition_xrefs":["GOC:TermGenie","PMID:16529801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"(25S)-Delta(7)-dafachronate binding","termid":"GO:1902052"}


id: GO:0003849
data:
  {"annotated_genes":["SJAG_03580","SJAG_00224"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78694,79999],"is_not":false,"summary":null,"term":"GO:0003849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythrose 4-phosphate + H2O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate.","definition_xrefs":["EC:2.5.1.54","RHEA:14717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_03580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"3-deoxy-7-phosphoheptulonate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DAHPSYN-RXN","KEGG_REACTION:R01826"],"synonyms":[{"name":"2-dehydro-3-deoxy-phosphoheptonate aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphoheptonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-D-arabino-heptonic acid 7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-2-heptulosonic acid 7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-heptolosonate-7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase activity","type":"related"},{"name":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","type":"related"},{"name":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"7-phospho-2-keto-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"D-erythrose-4-phosphate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"D-erythrose-4-phosphate-lyase activity","type":"related"},{"name":"DAH7-P synthase activity","type":"related"},{"name":"DAHP synthase activity","type":"related"},{"name":"DHAP synthase activity","type":"related"},{"name":"DS-Co activity","type":"related"},{"name":"DS-Mn activity","type":"related"},{"name":"KDPH synthase activity","type":"related"},{"name":"KDPH synthetase activity","type":"related"},{"name":"deoxy-D-arabino-heptulosonate-7-phosphate synthetase activity","type":"related"},{"name":"phospho-2-dehydro-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptanoate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptonic aldolase activity","type":"related"},{"name":"phospho-2-oxo-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)","type":"related"}],"termid":"GO:0003849","terms_by_termid":{"GO:0003849":null}}


id: PBO:0059180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 homolog, double strand break repair nuclease","termid":"PBO:0059180"}


id: PBO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLRK1 antisense RNA 1","termid":"PBO:0052559"}


id: PBO:0012025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Ypd1","termid":"PBO:0012025"}


id: PR:O94618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.09","synonyms":[{"name":"Spom972h-tim21","type":"exact"}],"termid":"PR:O94618"}


id: PBO:0027116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_premeiotic_DNA_replication_during_azygotic_meiosis","termid":"PBO:0027116"}


id: PATO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A chromatic scalar-circular quality inhering in an object that manifests in an observer by virtue of the dominant wavelength of the visible light; may be subject to fiat divisions, typically into 7 or 8 spectra.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatic property","termid":"PATO:0001301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color hue","termid":"PATO:0000015"}


id: PBO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-W","termid":"PBO:0002626"}


id: PBO:0056093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0056093"}


id: GO:0022012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of subpallium cells in the forebrain, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in forebrain","termid":"GO:0021846"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}


id: PBO:0047746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 10","termid":"PBO:0047746"}


id: PBO:0064343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A1","termid":"PBO:0064343"}


id: PR:Q9UT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NSFL1 cofactor p47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.09","secondary_identifiers":["UniProtKB:Q9UT81"],"synonyms":[{"name":"Spom972h-NSFL1C","type":"exact"},{"name":"meiotically up-regulated gene 39 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT81"}


id: PBO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2","termid":"PBO:0050627"}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: MONDO:0012630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 1q21.","definition_xrefs":["DOID:0110046","PMID:17564960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 13","secondary_identifiers":["OMIM:611152","UMLS:C1970147","MESH:C567000","GARD:16517","MEDGEN:370835"],"synonyms":[{"name":"AD13","type":"exact"},{"name":"Alzheimer disease 13","type":"exact"},{"name":"Alzheimer disease-13","type":"exact"},{"name":"Alzheimer's disease 13","type":"exact"},{"name":"Alzheimer's disease type 13","type":"exact"}],"termid":"MONDO:0012630","xrefs":{"Monarch":{"xref_id":"0012630"}}}


id: MONDO:0017573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XX disorder of sex development-anorectal anomalies syndrome is a rare developmental defect during embryogenesis syndrome characterized by a normal female karyotype, normal ovaries, male or ambiguous genitalia, urinary tract malformations (ranging from bilateral renal agenesis to mild unilateral hydronephrosis), müllerian duct anomalies (e.g. complete absence of the uterus and vagina, bicornuate uterus), and imperforate anus. Additional features may include tracheoesophageal fistula, radial aplasia, and malrotation of the gut.","definition_xrefs":["Orphanet:2973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX disorder of sex development-anorectal anomalies syndrome","secondary_identifiers":["GARD:18782","MEDGEN:1382292","UMLS:C4518078"],"synonyms":[{"name":"female pseudohermaphroditism-anorectal anomalies syndrome","type":"exact"}],"termid":"MONDO:0017573","xrefs":{"Monarch":{"xref_id":"0017573"}}}


id: GO:1905812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18434533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron axon guidance","synonyms":[{"name":"regulation of motoneuron axon guidance","type":"exact"},{"name":"regulation of motor axon guidance","type":"exact"},{"name":"regulation of motor axon pathfinding","type":"exact"}],"termid":"GO:1905812"}


id: SO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_methylation","termid":"SO:0001222"},{"relation_name":"is_a","term_name":"gene_silenced_by_histone_modification","termid":"SO:0001225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_methylation","synonyms":[{"name":"gene silenced by histone methylation","type":"exact"}],"termid":"SO:0001226"}


id: GO:1990115
data:
  {"annotated_genes":["SJAG_04012","SJAG_04093"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80311,117680],"is_not":false,"summary":null,"term":"GO:1990115"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase III complex.","definition_xrefs":["PMID:23459708","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"RNA polymerase III assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase III complex assembly","type":"exact"},{"name":"RNA Polymerase III complex assembly","type":"exact"}],"termid":"GO:1990115","terms_by_termid":{"GO:1990115":null}}


id: MONDO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"didymosis aplasticosebacea","secondary_identifiers":["GARD:21591","UMLS:C4751600","MEDGEN:1650408","Orphanet:370046"],"synonyms":[{"name":"aplasia cutis congenita-nevus sebaceus syndrome","type":"exact"}],"termid":"MONDO:0018259","xrefs":{"Monarch":{"xref_id":"0018259"}}}


id: GO:0046037
data:
  {"annotated_genes":["SJAG_01298","SJAG_04634","SJAG_04849","SJAG_06634","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65332],"is_not":false,"summary":null,"term":"GO:0046037"},{"annotations":[59782,63868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[100716,77410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP metabolism","type":"exact"}],"termid":"GO:0046037","terms_by_termid":{"GO:0006177":null,"GO:0032263":null,"GO:0046037":null}}


id: GO:0033290
data:
  {"annotated_genes":["SJAG_02390","SJAG_04891","SJAG_03732","SJAG_00662","SJAG_03147","SJAG_02376","SJAG_04981","SJAG_03629","SJAG_02628","SJAG_02164","SJAG_03472","SJAG_04744","SJAG_04900"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59400,60092,60250,63179,64255,64668,64906,70267,71331,79398,95361,96355,97882],"is_not":false,"summary":null,"term":"GO:0033290"}]},"cv_name":"cellular_component","definition":"The protein-ribosome-tRNA complex that has just recognized the start codon of a capped mRNA. It is composed of the small ribosomal subunit, eukaryote initiation factors (eIF) eIF3 complex, eIF1, eIF1A, eIF2-GDP, eIF4 complex and initiatior-methionine-tRNA. Recognition of the start codon triggers downstream steps in the pathway, including eIF1 dissociation; Pi release from eIF2; and conversion to the closed, scanning-arrested conformation of the PIC.","definition_xrefs":["PMID:24319994","PMID:16510876","GOC:hjd","PMID:29735639","PMID:24499181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic translation preinitiation complex","termid":"GO:0070993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03732":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"eukaryotic 48S preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016283"],"synonyms":[{"name":"eukaryotic 48S initiation complex","type":"related"},{"name":"eukaryotic 48S pre-initiation complex","type":"exact"}],"termid":"GO:0033290","terms_by_termid":{"GO:0033290":null}}


id: GO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an animal organ or tissue with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of anatomical structure orientation","termid":"GO:0048560"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of animal organ orientation","termid":"GO:0048561"}


id: MONDO:0013218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy in which the cause of the disease is a mutation in the TSPAN12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TSPAN12-related exudative vitreoretinopathy","termid":"MONDO:0700231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 5","secondary_identifiers":["OMIM:613310","UMLS:C2750079","GARD:15646","MEDGEN:412872","DOID:0111408","MESH:C567648"],"synonyms":[{"name":"EVR5","type":"related"},{"name":"TSPAN12 exudative vitreoretinopathy","type":"exact"},{"name":"exudative vitreoretinopathy 5","type":"exact"},{"name":"exudative vitreoretinopathy caused by mutation in TSPAN12","type":"exact"},{"name":"exudative vitreoretinopathy type 5","type":"exact"}],"termid":"MONDO:0013218","xrefs":{"Monarch":{"xref_id":"0013218"}}}


id: GO:1900860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brevianamide F biosynthetic process (obsolete GO:1900860)","synonyms":[{"name":"up regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"up-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"upregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900860"}


id: MONDO:0018504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the stomach and is characterized by the absence of microscopic features of glandular or squamous differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of stomach","secondary_identifiers":["UMLS:C1336858","SCTID:766757006","GARD:21759","NCIT:C5476","ONCOTREE:USTAD","Orphanet:423786","MEDGEN:237029"],"synonyms":[{"name":"Gastric undifferentiated carcinoma","type":"exact"},{"name":"anaplastic carcinoma of stomach","type":"exact"},{"name":"anaplastic carcinoma of the stomach","type":"exact"},{"name":"anaplastic gastric carcinoma","type":"exact"},{"name":"stomach undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of stomach","type":"exact"},{"name":"undifferentiated carcinoma of the stomach","type":"exact"},{"name":"undifferentiated gastric (stomach) cancer","type":"exact"},{"name":"undifferentiated gastric carcinoma","type":"exact"},{"name":"undifferentiated stomach adenocarcinoma","type":"related"}],"termid":"MONDO:0018504","xrefs":{"Monarch":{"xref_id":"0018504"}}}


id: PBO:0033785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033785"}


id: GO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A constituent of the extracellular matrix that facilitates attachment of cells to the matrix.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesive extracellular matrix constituent (obsolete GO:0030022)","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"exact"}],"termid":"GO:0030022"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 14","termid":"PBO:0046633"}


id: PBO:0080398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS28 subunit of ESCRT-I","termid":"PBO:0080398"}


id: PBO:0079577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 A","termid":"PBO:0079577"}


id: GO:0102616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin D + NAD(P) = oryzalexin A + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin A synthase activity (obsolete GO:0102616)","termid":"GO:0102616"}


id: MONDO:0015523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade malignant blood vessel neoplasm. It is characterized by the presence of epithelioid endothelial cells. The neoplastic cells are arranged in cords and nests, which are embedded in a myxoid to hyalinized stroma.","definition_xrefs":["NCIT:C3800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid hemangioendothelioma","secondary_identifiers":["ICDO:9130/3","ONCOTREE:EHAE","Orphanet:157791","GARD:20014","SCTID:403981003","SCTID:54124005","UMLS:C0334538","MEDGEN:569676","ICDO:9133/1","ICDO:9133/3","DOID:0080190","NORD:124536","MESH:D018323"],"synonyms":[{"name":"epithelioid angioendothelioma","type":"exact"},{"name":"epithelioid angiosarcoma","type":"exact"},{"name":"epithelioid hemangioendothelioma","type":"exact"},{"name":"malignant epithelioid hemangioendothelioma","type":"exact"}],"termid":"MONDO:0015523","xrefs":{"Monarch":{"xref_id":"0015523"}}}


id: PBO:0060681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myc downstream regulated 1","termid":"PBO:0060681"}


id: MONDO:0014884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive familial intrahepatic cholestasis in which the cause of the disease is a mutation in the NR1H4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 5","secondary_identifiers":["OMIM:617049","NANDO:1201047","MEDGEN:934714","GARD:17867","Orphanet:480476","DOID:0070225","MONDO:0018802","UMLS:C4310747"],"synonyms":[{"name":"NR1H4 deficiency","type":"exact"},{"name":"NR1H4 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"PFIC5","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 5","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 5; PFIC5","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, type 5","type":"exact"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in NR1H4","type":"exact"}],"termid":"MONDO:0014884","xrefs":{"Monarch":{"xref_id":"0014884"}}}


id: GO:0071098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the Src family tyrosine kinase Fyn.","definition_xrefs":["PMID:11684709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Fyn complex","synonyms":[{"name":"ITGA6-ITGB4-FYN complex","type":"narrow"}],"termid":"GO:0071098"}


id: GO:0016868
data:
  {"annotated_genes":["SJAG_03723","SJAG_01209","SJAG_00134","SJAG_00978","SJAG_02009","SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73689,72752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004610"},{"annotations":[78370,115443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004614"},{"annotations":[74193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004619"},{"annotations":[80982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004615"},{"annotations":[75198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008973"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_00978":null,"SJAG_01209":null,"SJAG_02009":null,"SJAG_02783":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"intramolecular phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.4.2.-","GO:0016777"],"synonyms":[{"name":"intramolecular transferase activity, phosphotransferases","type":"exact"},{"name":"phosphomutase activity","type":"exact"},{"name":"phosphotransferase activity, with regeneration of donors, apparently catalyzing intramolecular transfers","type":"exact"}],"termid":"GO:0016868","terms_by_termid":{"GO:0004610":null,"GO:0004614":null,"GO:0004615":null,"GO:0004619":null,"GO:0008973":null}}


id: MONDO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"simple partial epilepsy","secondary_identifiers":["ICD9:345.51","DOID:5129"],"termid":"MONDO:0003290","xrefs":{"Monarch":{"xref_id":"0003290"}}}


id: MONDO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lymphatic part of lymphoid system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic system disorder","secondary_identifiers":["MESH:D008206","MEDGEN:892707","NCIT:C50764","DOID:75","UMLS:C4021976","SCTID:362971004","EFO:0007352"],"synonyms":[{"name":"adenopathy","type":"related"},{"name":"disease of lymphatic part of lymphoid system","type":"exact"},{"name":"disease of lympoid system","type":"related"},{"name":"disease or disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymph node and lymphatics","type":"exact"},{"name":"disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymphatic system","type":"exact"},{"name":"disorder of lymphoid system","type":"related"},{"name":"glands, swollen","type":"exact"},{"name":"lymphadenopathy","type":"narrow"},{"name":"lymphangiopathy","type":"narrow"},{"name":"lymphatic disease","type":"exact"},{"name":"lymphatic disorder","type":"exact"},{"name":"lymphatic part of lymphoid system disease","type":"exact"},{"name":"lymphatic part of lymphoid system disease or disorder","type":"exact"},{"name":"lympoid system disease","type":"related"},{"name":"swollen gland","type":"exact"},{"name":"swollen glands","type":"exact"}],"termid":"MONDO:0005833","xrefs":{"Monarch":{"xref_id":"0005833"}}}


id: GO:0099605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency of action potentials in a spike train.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing rate","termid":"GO:0099605"}


id: PBO:0071459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32","termid":"PBO:0071459"}


id: PBO:0027904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_mitosis","termid":"PBO:0027904"}


id: FYPO:0002158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to G2/M transition DNA damage checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished response to mitotic G2/M transition checkpoint signaling","termid":"FYPO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition DNA damage checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition DNA damage checkpoint arrest","type":"related"},{"name":"abolished response to mitotic G2 DNA damage checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from mitotic G2/M transition DNA damage activation abolished","type":"exact"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling abolished","type":"exact"}],"termid":"FYPO:0002158"}


id: MONDO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare combined T and B cell immunodeficiency with a predisposition to lymphoproliferative syndrome. It is characterized by persistent symptomatic EBV-viremia and hypogammaglobulinemia variably presenting with fever, lymphadenopathy and systemic inflammatory conditions including hepatitis, pneumonia and sepsis. It may be associated with lymphoma, hemophagocytic lymphohistiocytosis, and aplastic anemia.","definition_xrefs":["Orphanet:238505"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive lymphoproliferative disease (obsolete MONDO:0016536)","secondary_identifiers":["NANDO:2200735"],"synonyms":[{"name":"CD27 deficiency","type":"exact"}],"termid":"MONDO:0016536","xrefs":{"Monarch":{"xref_id":"0016536"}}}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: MONDO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 101 (varicella zoster virus-specific)","secondary_identifiers":["OMIM:619872","UMLS:C5676983","MEDGEN:1810668"],"synonyms":[{"name":"IMD101","type":"exact"},{"name":"immunodeficiency 101 (varicella zoster virus-specific)","type":"exact"}],"termid":"MONDO:0030813","xrefs":{"Monarch":{"xref_id":"0030813"}}}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["EC:1.3.1.31","MetaCyc:2-ENOATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: PBO:0028771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_plumbagin","termid":"PBO:0028771"}


id: MONDO:0026166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic immune deficiency with skin involvement (obsolete MONDO:0026166)","secondary_identifiers":["Orphanet:183494"],"termid":"MONDO:0026166","xrefs":{"Monarch":{"xref_id":"0026166"}}}


id: MONDO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis cutis dyschromia is a rare primary cutaneous amyloidosis characterized by macular or reticulate hyperpigmentation with symmetrically distributed guttate hypo- and hyperpigmented lesions which progress gradually over the years to involve almost the entire body (with relative sparing of the face, hands, feet and neck). Patients are usually asymptomatic, however mild pruritus may be associated. Amyloid deposition in the papillary dermis is observed on skin biopsy. Systemic amyloidosis is not present and association with generalized morphea, atypical Parkinsonism, spasticity, motor weakness or colon carcinoma is rare.","definition_xrefs":["Orphanet:319635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis cutis dyschromia","secondary_identifiers":["MEDGEN:1641859","UMLS:C4554601","GARD:17466","DOID:0080932","ICD10EXP:E85.4+","ICD10EXP:L99.0*"],"synonyms":[{"name":"amyloidosis cutis dyschromica","type":"exact"}],"termid":"MONDO:0017906","xrefs":{"Monarch":{"xref_id":"0017906"}}}


id: PBO:0065619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase domain containing 1","termid":"PBO:0065619"}


id: PBO:0054769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2181","termid":"PBO:0054769"}


id: PBO:0046544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 1, envelope","termid":"PBO:0046544"}


id: PBO:0066952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 254","termid":"PBO:0066952"}


id: GO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of where on the body surface, within the body or in the environment a stimulus originates.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stimulus location","termid":"GO:0050888"}


id: PBO:0054393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1789","termid":"PBO:0054393"}


id: GO:0102664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-leucine + ATP = H+ + indole-3-acetyl-leucine + diphosphoric acid + AMP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-leucine synthetase activity (obsolete GO:0102664)","termid":"GO:0102664"}


id: GO:0048617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic foregut morphogenesis","termid":"GO:0048617"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: PATO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A limited, often assigned period of activity.","definition_xrefs":["answers.com:answers.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000167 bouts (obsolete PATO:0000167)","termid":"PATO:0000167"}


id: PATO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure.","definition_xrefs":["PATOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic","synonyms":[{"name":"dendriform","type":"exact"},{"name":"dendroid","type":"exact"},{"name":"dendroidal","type":"exact"}],"termid":"PATO:0002045"}


id: GO:0061988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the germ cell nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"karyosome formation","termid":"GO:0061988"}


id: MONDO:0010330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Primary ciliary dyskinesia - retinitis pigmentosa is an X-linked ciliary dysfunction of both respiratory epithelium and photoreceptors of the retina leading to ocular disorders (mild night blindness, constriction of the visual field, and scotopic and photopic ERG responses reduced to 30-60%) associated with primary ciliary dyskinesia manifestations (chronic bronchorrhea with bronchoectasis and chronic sinusitis) and sensorineural hearing loss.","definition_xrefs":["Orphanet:247522"],"gene_count":0,"genotype_count":0,"name":"obsolete primary ciliary dyskinesia-retinitis pigmentosa syndrome (obsolete MONDO:0010330)","secondary_identifiers":["DOID:0112124","MESH:C567595","OMIM:300455"],"synonyms":[{"name":"retinitis pigmentosa, X-linked, and SINORESPIRATORY infections, with or without deafness","type":"related"}],"termid":"MONDO:0010330","xrefs":{"Monarch":{"xref_id":"0010330"}}}


id: PBO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 25","termid":"PBO:0070284"}


id: PBO:0034447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_meiosis","termid":"PBO:0034447"}


id: PATO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Surface shape that refers to the inward or outward curvature of the surface.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavity","termid":"PATO:0002005"}


id: PBO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B beta subunit","termid":"PBO:0032732"}


id: MONDO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Balo concentric sclerosis (obsolete MONDO:0000713)","termid":"MONDO:0000713","xrefs":{"Monarch":{"xref_id":"0000713"}}}


id: GO:1902577
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97936],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a medial cortical node.","definition_xrefs":["GOC:TermGenie","PMID:24127216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in medial cortical node","type":"exact"},{"name":"protein localisation to medial cortical node","type":"exact"},{"name":"protein localization in medial cortical node","type":"exact"}],"termid":"GO:1902577","terms_by_termid":{"GO:0120047":null}}


id: PBO:0043441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 1","termid":"PBO:0043441"}


