# terms

id: GO:0016939
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes.","definition_xrefs":["PMID:20930137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"kinesin II complex","termid":"GO:0016939"}


id: PBO:0047352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 5","termid":"PBO:0047352"}


id: PBO:0057731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1306","termid":"PBO:0057731"}


id: MONDO:1012240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central retinal degeneration, non-human animal","termid":"MONDO:1011978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, domestic cat","secondary_identifiers":["OMIA:000867-9685"],"termid":"MONDO:1012240","xrefs":{"Monarch":{"xref_id":"1012240"}}}


id: PBO:0072997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 1","termid":"PBO:0072997"}


id: GO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of RNA to 5'-phosphomonoester oligonucleotides in both 5' to 3' and 3' to 5' directions.","definition_xrefs":["EC:3.1.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0004527","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"exoribonuclease H activity","secondary_identifiers":["MetaCyc:3.1.13.2-RXN"],"synonyms":[{"name":"retroviral reverse transcriptase RNaseH","type":"related"}],"termid":"GO:0004533"}


id: PBO:0078229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-4","termid":"PBO:0078229"}


id: PATO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's ability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Prototrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prototrophic","termid":"PATO:0000423"}


id: PBO:0067138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 186, pseudogene","termid":"PBO:0067138"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: PBO:0040582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 1","termid":"PBO:0040582"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20563710","PMID:21622569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: SO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5_8S_rRNA (5.8S rRNA), which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5_8S_gene","synonyms":[{"name":"5.8S rRNA gene","type":"exact"},{"name":"5_8S rRNA gene","type":"exact"},{"name":"5_8S_rRNA_gene","type":"exact"}],"termid":"SO:0002240"}


id: GO:0039672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts natural killer cell activation in the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10799855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host natural killer cell mediated immune response","termid":"GO:0039671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host natural killer cell activation","synonyms":[{"name":"suppression by virus of host NK-cell activation","type":"exact"},{"name":"suppression by virus of host natural killer cell activation","type":"narrow"}],"termid":"GO:0039672"}


id: PBO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AG member 1","termid":"PBO:0061967"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: GO:1901268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephalosporin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00172","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalosporin biosynthetic process","termid":"GO:0043646"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephalosporin C biosynthetic process","synonyms":[{"name":"cephalosporin C anabolism","type":"exact"},{"name":"cephalosporin C biosynthesis","type":"exact"},{"name":"cephalosporin C formation","type":"exact"},{"name":"cephalosporin C synthesis","type":"exact"}],"termid":"GO:1901268"}


id: PATO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/concentration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentration of","synonyms":[{"name":"concentration","type":"exact"}],"termid":"PATO:0000033"}


id: PBO:0070511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 10","termid":"PBO:0070511"}


id: PBO:0046846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 1","termid":"PBO:0046846"}


id: PBO:0041296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain containing 3 centriole elongation regulator","termid":"PBO:0041296"}


id: FYPO:0004994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis I","synonyms":[{"name":"delayed meiosis I","type":"exact"},{"name":"delayed onset of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004994"}


id: FYPO:0000789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-NA-PP1. Cells stop growing (and may die) at a concentration of 1-NA-PP1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to 1-NA-PP1","synonyms":[{"name":"hypersensitive to 1-NA-PP1","type":"exact"},{"name":"sensitive to 1-NA-PP1 during mitotic cell cycle","type":"related"},{"name":"sensitive to 1-NA-PP1 during vegetative growth","type":"exact"},{"name":"sensitive to 1-tert-butyl-3-naphthalen-1-yl-1H-pyrazolo[3,4-d]pyrimidin-4-amine","type":"exact"},{"name":"sensitive to 4-amino-1-tert-butyl-3-(1'-naphthyl)pyrazolo[3,4-d]pyrimidine","type":"exact"}],"termid":"FYPO:0000789"}


id: PBO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 7","termid":"PBO:0045883"}


id: GO:1904881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["GO_REF:0000071","PMID:24012591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to hydrogen sulfide","termid":"GO:1904880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydrogen sulfide","synonyms":[{"name":"cellular response to dihydridosulfur","type":"exact"},{"name":"cellular response to sulfane","type":"exact"}],"termid":"GO:1904881"}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: PBO:0070272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 7","termid":"PBO:0070272"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: GO:1901121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tobramycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tobramycin biosynthetic process","synonyms":[{"name":"tobramycin anabolism","type":"exact"},{"name":"tobramycin biosynthesis","type":"exact"},{"name":"tobramycin formation","type":"exact"},{"name":"tobramycin synthesis","type":"exact"}],"termid":"GO:1901121"}


id: FYPO:0002872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the endoplasmic reticulum (ER) is abnormal. In fission yeast, the ER is normally located in the cell cortex and tethered to the plasma membrane.","definition_xrefs":["PomBase:mah","PMID:23041194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum localization","synonyms":[{"name":"abnormal ER localization","type":"exact"},{"name":"abnormal endoplasmic reticulum localisation","type":"exact"},{"name":"abnormal endoplasmic reticulum localization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002872"}


id: PBO:0109091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 5","termid":"PBO:0109091"}


id: PBO:0040631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated RING domain 1","termid":"PBO:0040631"}


id: MONDO:0017502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acheiria","termid":"MONDO:0017445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acheiria, unilateral","secondary_identifiers":["Orphanet:295101","icd11.foundation:1906312110"],"synonyms":[{"name":"congenital absence of hand, unilateral","type":"exact"}],"termid":"MONDO:0017502","xrefs":{"Monarch":{"xref_id":"0017502"}}}


id: GO:0005783
data:
  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id: GO:1902439
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id: GO:0030398
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id: MONDO:0030543
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id: PBO:0038698
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id: FYPO:0000755
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id: GO:1905360
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id: MONDO:0013649
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id: PBO:0048574
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id: GO:1901834
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id: PBO:0083891
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id: GO:0097728
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id: PBO:0043969
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id: PBO:0039243
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id: GO:0021529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord oligodendrocyte cell differentiation","termid":"GO:0021529"}


id: GO:0050792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral process","synonyms":[{"name":"regulation of viral reproduction","type":"narrow"}],"termid":"GO:0050792"}


id: FYECO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the medium in which cells are grown.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth medium","termid":"FYECO:0000009"}


id: GO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland bud epithelial cell proliferation that results in the elongation of the bud.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060651"}


id: SO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of polypeptide with a given structural property.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_structural_region","secondary_identifiers":["BS:00337"],"synonyms":[{"name":"polypeptide structural region","type":"exact"},{"name":"structural_region","type":"related"}],"termid":"SO:0001070"}


id: PBO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin","termid":"PBO:0003156"}


id: MONDO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocarditis is a condition that is characterized by inflammation of the heart muscle (myocardium). Some affected people have no noticeable symptoms of the condition. When present, signs and symptoms may include chest pain, abnormal heartbeat, shortness of breath, fatigue, signs of infection (i.e. fever, headache, sore throat, diarrhea), and leg swelling. Myocarditis can be caused by a variety of factors including infections (viral, bacterial, parasitic, and fungal), allergic reactions to certain medications, and exposure to certain chemicals. It can also be associated with other inflammatory conditions such as lupus, Wegener's granulomatosis, giant cell arteritis and Takayasu's arteritis. Most cases occur sporadically in people with no family history of the condition. Treatment aims to address the underlying cause of the condition. Medications and rarely, a heart transplant may be needed if the heart muscle becomes weak.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extrinsic cardiomyopathy","termid":"MONDO:0002824"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"inflammation of heart layer","termid":"MONDO:0024636"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocarditis","secondary_identifiers":["icd11.foundation:1018829714","NORD:1882","MEDGEN:44553","SCTID:50920009","UMLS:C0027059","EFO:0009609","MESH:D009205","GARD:7137","NCIT:C34831","DOID:820","ICD10CM:I40","ICD9:429.0"],"synonyms":[{"name":"inflammation of myocardium","type":"exact"},{"name":"myocardial inflammation","type":"exact"},{"name":"myocardial inflammation (finding)","type":"exact"},{"name":"myocardium inflammation","type":"exact"}],"termid":"MONDO:0004496","xrefs":{"Monarch":{"xref_id":"0004496"}}}


id: PBO:0048029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 1","termid":"PBO:0048029"}


id: FYPO:0004189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during cellular response to hydroxyurea","synonyms":[{"name":"increased protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased protein level during cellular response to HU","type":"exact"},{"name":"increased protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004189"}


id: MONDO:0003894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanotic schwannoma that affects the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanotic neurilemmoma","termid":"MONDO:0002558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal melanocytic neurilemmoma","secondary_identifiers":["DOID:6484","MEDGEN:277352","NCIT:C6635","UMLS:C1334668"],"synonyms":[{"name":"mediastinal melanocytic schwannoma","type":"exact"},{"name":"mediastinal melanotic schwannoma","type":"exact"},{"name":"melanocytic neurilemmoma of mediastinum","type":"exact"},{"name":"melanocytic neurilemmoma of the mediastinum","type":"exact"},{"name":"melanocytic schwannoma of mediastinum","type":"exact"},{"name":"melanocytic schwannoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003894","xrefs":{"Monarch":{"xref_id":"0003894"}}}


id: MONDO:0009395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis corticalis generalisata, also known as van Buchem disease, is a rare craniotubular hyperostosis characterized by hyperostosis of the skull, mandible, clavicles, ribs and diaphyses of the long bones, as well as the tubular bones of the hands and feet. Clinical manifestations include increased skull thickness with cranial nerve entrapment causing inconsistent cranial nerve palsies.","definition_xrefs":["Orphanet:3416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis corticalis generalisata","secondary_identifiers":["GARD:2833","DOID:0080036","OMIM:239100","SCTID:59763006","UMLS:C0432272","icd11.foundation:241514592","MEDGEN:98484","NCIT:C131812"],"synonyms":[{"name":"SOST-related sclerosing bone dysplasia","type":"related"},{"name":"VAN Buchem disease","type":"related"},{"name":"VBCH","type":"related"},{"name":"Van Buchem disease","type":"exact"},{"name":"endosteal hyperostosis","type":"exact"},{"name":"endosteal hyperostosis autosomal recessive","type":"related"},{"name":"endosteal hyperostosis, autosomal recessive","type":"related"},{"name":"hyperostosis corticalis generalisata","type":"exact"},{"name":"hyperphosphatasemia tarda","type":"exact"},{"name":"van Buchem disease","type":"exact"},{"name":"van Buchem disease type 1","type":"exact"}],"termid":"MONDO:0009395","xrefs":{"Monarch":{"xref_id":"0009395"}}}


id: MOD:01656
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(4-dimethylaminophenylazo)benzenesulfonyl chloride, Dabsyl chloride.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dabsyl chloride derivatized residue","synonyms":[{"name":"4-([4-(dimethylamino)phenyl]diazenyl)benzenesulfonyl","type":"exact"},{"name":"DabsylRes","type":"exact"}],"termid":"MOD:01656"}


id: PBO:0087194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase complex subunit; key transcriptional regulator of early meiotic genes; involved in chromatin remodeling and transcriptional repression via DNA looping; binds URS1 upstream regulatory sequence, represses transcription by recruiting conserved histone deacetylase Rpd3p (through co-repressor Sin3p) and chromatin-remodeling factor Isw2p; couples metabolic responses to nutritional cues with initiation and progression of meiosis","termid":"PBO:0087194"}


id: PBO:0044209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin O","termid":"PBO:0044209"}


id: PBO:0045256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 2","termid":"PBO:0045256"}


id: MONDO:1010124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, non-human animal","secondary_identifiers":["OMIA:002064"],"termid":"MONDO:1010124","xrefs":{"Monarch":{"xref_id":"1010124"}}}


id: GO:0120261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of heterochromatin organization","termid":"GO:0120261"}


id: PBO:0064583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member D","termid":"PBO:0064583"}


id: GO:0038109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of stem cell factor to the tyrosine kinase receptor KIT on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription. Stem cell factor (KIT ligand) binding to the receptor Kit mediates receptor dimerization, activation of its intrinsic tyrosine kinase activity and autophosphorylation. The activated receptor then phosphorylates various substrates, thereby activating distinct signaling cascades within the cell that trigger a change in state or activity of the cell.","definition_xrefs":["PMID:16129412","GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to stem cell factor stimulus","termid":"GO:0036216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Kit signaling pathway","synonyms":[{"name":"Kit signalling pathway","type":"exact"},{"name":"SCF signaling pathway","type":"exact"},{"name":"stem cell factor receptor signaling pathway","type":"exact"},{"name":"stem cell factor signaling pathway","type":"exact"}],"termid":"GO:0038109"}


id: GO:0102726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-DIMBOA glucoside + H2O = H+ + DIMBOA + beta-D-glucose.","definition_xrefs":["EC:3.2.1.182","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"DIMBOA glucoside beta-D-glucosidase activity","secondary_identifiers":["RHEA:33975","MetaCyc:RXN-7082"],"termid":"GO:0102726"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: PBO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophosphate N-acetylneuraminic acid synthetase","termid":"PBO:0043392"}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: PBO:0113753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted plasma membrane receptor (Pfam-N)","termid":"PBO:0113753"}


id: PBO:0061947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily X member 5 pseudogene","termid":"PBO:0061947"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: PBO:0064711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 47","termid":"PBO:0064711"}


id: MOD:01999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-retinylidene-(11-cis)-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-retinylidene-L-lysine (unspecified geometric isomer)","termid":"MOD:02000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(11-cis)-retinylidene-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(2E,4Z,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"}],"termid":"MOD:01999"}


id: PR:Q9UT92
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.07c gene.","definition_xrefs":["UniProtKB:Q9UT92","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C323.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.07c","synonyms":[{"name":"Spom972h-SPAC323.07c","type":"exact"}],"termid":"PR:Q9UT92"}


id: PBO:0043663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COQ7 divergent transcript","termid":"PBO:0043663"}


id: MONDO:0018954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loeys-Dietz syndrome is a rare genetic connective tissue disorder characterized by a broad spectrum of craniofacial, vascular and skeletal manifestations with four genetic subtypes described forming a clinical continuum.","definition_xrefs":["Orphanet:60030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"Marfan and Marfan-related disorder","termid":"MONDO:0017310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Loeys-Dietz syndrome","secondary_identifiers":["UMLS:C2697932","MEDGEN:395827","NORD:91173","GARD:10788","MESH:D055947","OMIMPS:609192","SCTID:446263001","DOID:0050466","NANDO:2200969","NCIT:C75006","ICD9:759.89"],"synonyms":[{"name":"Loeys-Dietz syndrome","type":"exact"},{"name":"aortic aneurysm syndrome due to TGF-beta receptors anomalies","type":"exact"},{"name":"aortic aneurysm syndrome, Loeys-Dietz type","type":"related"}],"termid":"MONDO:0018954","xrefs":{"Monarch":{"xref_id":"0018954"}}}


id: GO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a etioplast and form the etioplast envelope.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"etioplast envelope","termid":"GO:0034425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"etioplast membrane","termid":"GO:0034426"}


id: PBO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AlkylTransferase-Like","termid":"PBO:0034748"}


id: PBO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide receptor 2","termid":"PBO:0061401"}


id: PBO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc4","termid":"PBO:0001970"}


id: PBO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_transport_during_vegetative_growth","termid":"PBO:0031614"}


id: PBO:0051445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-31 (pseudogene)","termid":"PBO:0051445"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: PBO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm4","termid":"PBO:0004914"}


id: GO:0098945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic active zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic active zone membrane (obsolete GO:0098945)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098945"}


id: GO:1905217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["PMID:22309505","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to astaxanthin","synonyms":[{"name":"response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905217"}


id: PBO:0029894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_terbinafine","termid":"PBO:0029894"}


id: GO:1905548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["PMID:25819580","GO_REF:0000058","GOC:nc","GOC:BHF_telomere","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of subtelomeric heterochromatin assembly (obsolete GO:1905548)","synonyms":[{"name":"down regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down regulation of telomeric heterochromatin formation","type":"related"},{"name":"down-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down-regulation of telomeric heterochromatin formation","type":"related"},{"name":"downregulation of telomeric heterochromatin assembly","type":"related"},{"name":"downregulation of telomeric heterochromatin formation","type":"related"},{"name":"inhibition of telomeric heterochromatin assembly","type":"narrow"},{"name":"inhibition of telomeric heterochromatin formation","type":"narrow"},{"name":"negative regulation of telomeric heterochromatin assembly","type":"related"},{"name":"negative regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905548"}


id: MONDO:0014359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PRKACA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 4","secondary_identifiers":["GARD:16016","DOID:0070549","MEDGEN:862862","OMIM:615830","UMLS:C4014425"],"synonyms":[{"name":"ACTH-independent adrenal Cushing syndrome, somatic","type":"related"},{"name":"Cushing syndrome, ACTH-independent adrenal, somatic","type":"exact"},{"name":"Cushing syndrome, adrenal, due to Ppnad4","type":"related"},{"name":"PPNAD4","type":"related"},{"name":"PRKACA primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"chromosome 19P13 Duplication syndrome","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 4","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 4","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PRKACA","type":"exact"}],"termid":"MONDO:0014359","xrefs":{"Monarch":{"xref_id":"0014359"}}}


id: PBO:0039033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 10, pseudogene","termid":"PBO:0039033"}


id: PBO:0065400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 3 pseudogene 1","termid":"PBO:0065400"}


id: MONDO:1011729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M deficiency, non-human animal","secondary_identifiers":["OMIA:000556"],"termid":"MONDO:1011729","xrefs":{"Monarch":{"xref_id":"1011729"}}}


id: PBO:0053411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 348","termid":"PBO:0053411"}


id: PBO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2","termid":"PBO:0045694"}


id: PBO:0050992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 88","termid":"PBO:0050992"}


id: GO:0006316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group I intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group I introns are self-splicing introns that use guanosine as a cofactor in the splicing reaction.","definition_xrefs":["PMID:10487208","GOC:mcc","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"movement of group I intron","termid":"GO:0006316"}


id: GO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol + ATP = 1-amino-1-deoxy-scyllo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.65","RHEA:18605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"scyllo-inosamine 4-kinase activity","secondary_identifiers":["MetaCyc:SCYLLO-INOSAMINE-KINASE-RXN","KEGG_REACTION:R03384"],"synonyms":[{"name":"ATP:1-amino-1-deoxy-scyllo-inositol 4-phosphotransferase activity","type":"related"},{"name":"ATP:inosamine phosphotransferase activity","type":"related"},{"name":"scyllo-inosamine kinase (phosphorylating)","type":"related"},{"name":"scyllo-inosamine kinase activity","type":"exact"}],"termid":"GO:0050276"}


id: GO:1902786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:23826995","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dodecane","termid":"GO:1902786"}


id: FYPO:0005455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly occurs at one or more chromosome ends generated by a double-strand break.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere assembly","termid":"FYPO:0005454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"telomere assembly at double-strand break site","synonyms":[{"name":"de novo telomere addition at double-strand break site","type":"exact"},{"name":"telomere assembly at double-strand break site during mitotic cell cycle","type":"related"},{"name":"telomere assembly at double-strand break site during vegetative growth","type":"exact"},{"name":"telomere formation at double-strand break site","type":"exact"}],"termid":"FYPO:0005455"}


id: PBO:0039175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 7","termid":"PBO:0039175"}


id: PBO:0085768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase related to mammalian GSK-3 glycogen synthase kinases; GSK-3 homologs (Mck1p, Rim11p, Mrk1p, Ygk3p) are involved in control of Msn2p-dependent transcription of stress responsive genes and in protein degradation; YGK3 has a paralog, MCK1, that arose from the whole genome duplication","termid":"PBO:0085768"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: GO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate determination","synonyms":[{"name":"auditory hair cell fate determination","type":"exact"}],"termid":"GO:0042668"}


id: GO:1900420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of  alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"negatively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol catabolic process","synonyms":[{"name":"down regulation of cellular alcohol catabolic process","type":"exact"},{"name":"down-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"downregulation of cellular alcohol catabolic process","type":"exact"},{"name":"inhibition of cellular alcohol catabolic process","type":"narrow"}],"termid":"GO:1900420"}


id: FYPO:0003444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move in random directions such that they do not undergo an overall movement towards the cell center. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal medial cortical node condensation","synonyms":[{"name":"abnormal medial cortical node condensation during mitotic cell cycle","type":"related"},{"name":"abnormal medial cortical node condensation during vegetative growth","type":"exact"},{"name":"abnormal medial cortical node migration","type":"exact"}],"termid":"FYPO:0003444"}


id: MONDO:0008135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 13 with retinal and foveal abnormalities","secondary_identifiers":["UMLS:C5435585","MEDGEN:1768962","MESH:C563494","OMIM:165510"],"synonyms":[{"name":"optic atrophy 13 with retinal and foveal abnormalities","type":"exact"},{"name":"optic atrophy with negative Electroretinograms","type":"exact"}],"termid":"MONDO:0008135","xrefs":{"Monarch":{"xref_id":"0008135"}}}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: GO:0047744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-4-chloro-2-(2,3-dihydroxyphenyl)pyridazin-3(2H)-one + O2 = 5-amino-4-chloro-2-(2-hydroxymuconoyl)pyridazin-3(2H)-one + 2 H+.","definition_xrefs":["EC:1.13.11.36","RHEA:20449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"chloridazon-catechol dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R04602","MetaCyc:CHLORIDAZON-CATECHOL-DIOXYGENASE-RXN"],"synonyms":[{"name":"5-amino-4-chloro-2-(2,3-dihydroxyphenyl)-3(2H)-pyridazinone 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047744"}


id: GO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of 3',5'-cAMP.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to cAMP","synonyms":[{"name":"chemotaxis to 3',5' cAMP","type":"exact"},{"name":"chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"chemotaxis to cyclic AMP","type":"exact"}],"termid":"GO:0043327"}


id: MOD:00119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["ChEBI:21347","DeltaMass:7","RESID:AA0110#CSX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lanthionine (Cys-Ser)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"},{"name":"XLNK-SCys-(L)3Dha","type":"exact"}],"termid":"MOD:00119"}


id: PATO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001120 relative momentum value (obsolete PATO:0001120)","termid":"PATO:0001120"}


id: GO:0140282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + lipid II + ATP + H2O = L-glutamate + beta-D-GlcNAc(1->4)-Mur2Ac(oyl-L-Ala-D-isoGln-L-Lys-D-Ala-D-Ala)-diphospho-di-trans,octa-cis-undecaprenol + ADP + phosphate.","definition_xrefs":["PMID:30154570","PMID:22291598","RHEA:57928","PMID:30093673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity on lipid II","secondary_identifiers":["EC:6.3.5.13"],"synonyms":[{"name":"L-glutamate--lipid II transaminase activity","type":"exact"},{"name":"undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl pentapeptide amidotransferase (glutamine-hydrolyzing) activity","type":"exact"}],"termid":"GO:0140282"}


id: MONDO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory and suppurating type of tinea capitis, a skin infection caused by Trichophyton or Microsporum fungi, that predominantly affects the scalp and that is characterized by the development of painful crusty lesions covered with follicular pustules and surrounded by erythematous alopecic areas, that can later evolve into abscesses and leave permanent cicatricial alopecia. Lesions can be associated with regional lymphadenopathy.","definition_xrefs":["Orphanet:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kerion celsi","secondary_identifiers":["OMIM:275240","SCTID:19087001","GARD:3109","UMLS:C0276742","MEDGEN:124446","icd11.foundation:1449494917"],"synonyms":[{"name":"TINEA imbricata, susceptibility to","type":"related"},{"name":"Tinea capitis profunda","type":"related"},{"name":"Trichophyton infection","type":"related"},{"name":"susceptibility to Tinea imbricata","type":"related"},{"name":"trichophytia profunda barbae","type":"related"},{"name":"trichophytia profunda capitis","type":"related"}],"termid":"MONDO:0010146","xrefs":{"Monarch":{"xref_id":"0010146"}}}


id: PBO:0065799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3HDML antisense RNA 1","termid":"PBO:0065799"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: PBO:0004119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transporter Mam1","termid":"PBO:0004119"}


id: PR:O74460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.16c","synonyms":[{"name":"Spom972h-SPCC16C4.16c","type":"exact"}],"termid":"PR:O74460"}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0000641","FYPO:0001985","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: PBO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 1","termid":"PBO:0044017"}


id: PBO:0058308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4681","termid":"PBO:0058308"}


id: PBO:0040313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 7","termid":"PBO:0040313"}


id: MONDO:0009076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder caused by mutations in the GJB2 gene, encoding gap junction beta-2 protein. The condition is characterized by profound sensorineural hearing loss and may be associated with vestibular dysfunction.","definition_xrefs":["NCIT:C129022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 1A","secondary_identifiers":["MESH:C567134","MEDGEN:388720","OMIM:220290","DOID:0110475","GARD:1697","UMLS:C2673759"],"synonyms":[{"name":"DFNB1","type":"narrow"},{"name":"DFNB1A","type":"narrow"},{"name":"GJB2-related deafness","type":"narrow"},{"name":"autosomal recessive deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 1A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 1A","type":"exact"},{"name":"connexin 26 deafness","type":"narrow"},{"name":"deafness nonsyndromic, connexin 26 linked","type":"narrow"},{"name":"deafness, autosomal recessive 1A","type":"narrow"},{"name":"deafness, autosomal recessive 1a, autosomal recessive, digenic dominant","type":"narrow"},{"name":"deafness, autosomal recessive type 1A","type":"narrow"},{"name":"deafness, digenic GJB2/GJB6, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB3","type":"narrow"},{"name":"deafness, digenic, GJB2/GJB3, Autosomal recessive, Digenic dominant","type":"exact"},{"name":"deafness, digenic, GJB2/GJB6","type":"narrow"}],"termid":"MONDO:0009076","xrefs":{"Monarch":{"xref_id":"0009076"}}}


id: PBO:0084982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase; transfers electrons from NADH to ubiquinone in respiratory chain but does not pump protons, in contrast to higher eukaryotic multisubunit respiratory complex I; upon apoptotic stress, is activated in mitochondria by N-terminal cleavage, then translocates to cytoplasm to induce apoptosis; homolog of human AIFM2; yeast NDI1 complements several phenotypes of human cell line with mutated MT-ND4, implicated in Leber hereditary optic neuropathy","termid":"PBO:0084982"}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: GO:0016352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide susceptibility/resistance (obsolete GO:0016352)","synonyms":[{"name":"insecticide susceptibility/resistance","type":"exact"}],"termid":"GO:0016352"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: MONDO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Lyme disease (obsolete MONDO:0001348)","termid":"MONDO:0001348","xrefs":{"Monarch":{"xref_id":"0001348"}}}


id: PBO:0039461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD11 pseudogene 1","termid":"PBO:0039461"}


id: GO:0033143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033143"}


id: PR:Q09740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine--fructose-6-phosphate aminotransferase [isomerizing] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate aminotransferase [isomerizing] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.11","secondary_identifiers":["UniProtKB:Q09740"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GFAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glmS","type":"exact"},{"name":"hexosephosphate aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09740"}


id: PBO:0087905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium","termid":"PBO:0087905"}


id: MONDO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of renal cell carcinoma. It is a well-circumscribed multicystic mass without solid areas. The inner lining of the cystic structures is composed of clear cells.","definition_xrefs":["NCIT:C4524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell renal carcinoma","termid":"MONDO:0005005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"multilocular clear cell renal cell carcinoma","secondary_identifiers":["MEDGEN:87547","ICDO:8316/3","UMLS:C0346249","GARD:21417","DOID:4463","Orphanet:319287","ICD9:189.0","SCTID:254916002"],"synonyms":[{"name":"MCRCC","type":"exact"},{"name":"cystadenocarcinoma of kidney","type":"exact"},{"name":"multilocular clear cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell carcinoma","type":"exact"},{"name":"multilocular clear cell renal cell adenocarcinoma","type":"exact"},{"name":"multilocular clear cell renal cell carcinoma","type":"exact"},{"name":"multilocular cystic clear cell renal cell neoplasm of low malignant potential","type":"exact"},{"name":"multilocular cystic renal cell adenocarcinoma","type":"exact"},{"name":"multilocular cystic renal cell cancer","type":"exact"},{"name":"multilocular cystic renal cell carcinoma","type":"exact"},{"name":"multilocular cystic renal neoplasm of low malignant potential","type":"related"},{"name":"renal cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0003010","xrefs":{"Monarch":{"xref_id":"0003010"}}}


id: MONDO:0020091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to obstructive azoospermia (obsolete MONDO:0020091)","secondary_identifiers":["Orphanet:98343"],"synonyms":[{"name":"Male infertility due to impaired sperm transport","type":"exact"}],"termid":"MONDO:0020091","xrefs":{"Monarch":{"xref_id":"0020091"}}}


id: MONDO:1012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, dog","secondary_identifiers":["OMIA:000527-9615"],"termid":"MONDO:1012114","xrefs":{"Monarch":{"xref_id":"1012114"}}}


id: PR:Q9HE00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metaxin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.04","secondary_identifiers":["UniProtKB:Q9HE00"],"synonyms":[{"name":"Spom972h-MTX2","type":"exact"}],"termid":"PR:Q9HE00"}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: MONDO:0971105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"neonatal renal venous thrombosis","secondary_identifiers":["UMLS:C5925061","MEDGEN:1863518","Orphanet:664912"],"termid":"MONDO:0971105","xrefs":{"Monarch":{"xref_id":"0971105"}}}


id: PBO:0057133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 216b","termid":"PBO:0057133"}


id: GO:0000062
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"fatty-acyl-CoA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8848247"],"synonyms":[{"name":"fatty-acyl binding","type":"broad"},{"name":"fatty-acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0000062","terms_by_termid":{"GO:0036042":null}}


id: GO:1903625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"negatively_regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA catabolic process","synonyms":[{"name":"down regulation of DNA breakdown","type":"exact"},{"name":"down regulation of DNA catabolic process","type":"exact"},{"name":"down regulation of DNA catabolism","type":"exact"},{"name":"down regulation of DNA degradation","type":"exact"},{"name":"down-regulation of DNA breakdown","type":"exact"},{"name":"down-regulation of DNA catabolic process","type":"exact"},{"name":"down-regulation of DNA catabolism","type":"exact"},{"name":"down-regulation of DNA degradation","type":"exact"},{"name":"downregulation of DNA breakdown","type":"exact"},{"name":"downregulation of DNA catabolic process","type":"exact"},{"name":"downregulation of DNA catabolism","type":"exact"},{"name":"downregulation of DNA degradation","type":"exact"},{"name":"inhibition of DNA breakdown","type":"narrow"},{"name":"inhibition of DNA catabolic process","type":"narrow"},{"name":"inhibition of DNA catabolism","type":"narrow"},{"name":"inhibition of DNA degradation","type":"narrow"},{"name":"negative regulation of DNA breakdown","type":"exact"},{"name":"negative regulation of DNA catabolism","type":"exact"},{"name":"negative regulation of DNA degradation","type":"exact"}],"termid":"GO:1903625"}


id: MONDO:0008165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Southeast Asian ovalocytosis (SAO) is a rare hereditary red cell membrane defect characterized by the presence of oval-shaped erythrocytes and with most patients being asymptomatic or occasionally manifesting with mild symptoms such as pallor, jaundice, anemia and gallstones.","definition_xrefs":["Orphanet:98868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"southeast Asian ovalocytosis","secondary_identifiers":["ICD9:282.1","OMIM:166900","GARD:16867","MEDGEN:350649","SCTID:191169008","icd11.foundation:835618545","UMLS:C1862322"],"synonyms":[{"name":"Melanesian elliptocytosis","type":"exact"},{"name":"Melanesian ovalocytosis","type":"exact"},{"name":"SAO","type":"exact"},{"name":"elliptocytosis 4","type":"related"},{"name":"elliptocytosis, stomatocytic hereditary","type":"related"},{"name":"he, stomatocytic","type":"related"},{"name":"hereditary ovalocytosis","type":"broad"},{"name":"ovalocytosis, Malaysian-Melanesian-Filipino type","type":"related"},{"name":"ovalocytosis, SA type","type":"exact"},{"name":"ovalocytosis, hereditary hemolytic","type":"related"},{"name":"ovalocytosis, southeast Asian","type":"related"},{"name":"sao","type":"exact"},{"name":"stomatocytic elliptocytosis","type":"exact"}],"termid":"MONDO:0008165","xrefs":{"Monarch":{"xref_id":"0008165"}}}


id: MONDO:0016404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic neurotransmission anomaly with epilepsy (obsolete MONDO:0016404)","secondary_identifiers":["Orphanet:225707"],"termid":"MONDO:0016404","xrefs":{"Monarch":{"xref_id":"0016404"}}}


id: PBO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 3","termid":"PBO:0048634"}


id: PBO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin X","termid":"PBO:0060345"}


id: MONDO:0005312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation in the intestinal mucosa of the continent ileal reservoir (or pouch) in patients who have undergone ileostomy and restorative proctocolectomy (proctocolectomy, restorative).","definition_xrefs":["MESH:D019449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pouchitis","secondary_identifiers":["ICD10CM:K91.850","ICD9:569.71","Orphanet:217067","UMLS:C0376620","EFO:0003921","GARD:20510","MEDGEN:138232"],"termid":"MONDO:0005312","xrefs":{"Monarch":{"xref_id":"0005312"}}}


id: PBO:0028999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_SRE_promoter","termid":"PBO:0028999"}


id: PBO:0071182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 23","termid":"PBO:0071182"}


id: PBO:0058423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4793","termid":"PBO:0058423"}


id: MONDO:0003615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nerve disorder caused by the entrapment and compression of a nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"nerve compression syndrome","secondary_identifiers":["MEDGEN:266933","NCIT:C27221","SCTID:45781009","UMLS:C1510429","MESH:D009408","EFO:0009487","DOID:573"],"synonyms":[{"name":"compression neuropathy","type":"exact"},{"name":"entrapment neuropathy","type":"exact"},{"name":"peripheral nerve entrapment syndrome","type":"exact"}],"termid":"MONDO:0003615","xrefs":{"Monarch":{"xref_id":"0003615"}}}


id: PBO:0004982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 1","termid":"PBO:0004982"}


id: GO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoseglycine metabolic process","synonyms":[{"name":"fructoseglycine metabolism","type":"exact"}],"termid":"GO:0030394"}


id: PBO:0029363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation","termid":"PBO:0029363"}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: PBO:0058562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6504","termid":"PBO:0058562"}


id: PBO:0117017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF16 antisense RNA 1","termid":"PBO:0117017"}


id: GO:0052508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052508)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052508"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: PBO:0069163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 415, pseudogene","termid":"PBO:0069163"}


id: PBO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase Ngl1","termid":"PBO:0032753"}


id: GO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"medium-chain fatty acid catabolic process","synonyms":[{"name":"medium chain fatty acid catabolic process","type":"exact"},{"name":"medium chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid breakdown","type":"exact"},{"name":"medium-chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid degradation","type":"exact"}],"termid":"GO:0051793"}


id: PBO:0058303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4677","termid":"PBO:0058303"}


id: PBO:0043038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 7","termid":"PBO:0043038"}


id: GO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that spans a cell membrane and possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor serine/threonine kinase binding","termid":"GO:0033612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}


id: FYPO:0002401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers","synonyms":[{"name":"extra microtubule bundles","type":"exact"},{"name":"increased level of MT bundles","type":"exact"},{"name":"increased microtubule bundling","type":"related"},{"name":"increased number of microtubule bundles","type":"exact"},{"name":"microtubule arrays present in increased numbers","type":"related"},{"name":"microtubule bundles present in greater numbers","type":"exact"}],"termid":"FYPO:0002401"}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: GO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylsulfanyl-N(6)-dimethylallyladenosine(37) in tRNA + acceptor-H2 + O2 = N(6)-[(2E)-4-hydroxy-3-methylbut-2-en-1-yl]-2-(methylsulfanyl)adenosine(37) in tRNA + acceptor + H2O.","definition_xrefs":["PMID:8253666","RHEA:65812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity","secondary_identifiers":["EC:1.14.99.69"],"synonyms":[{"name":"2-methylthio-cis-ribozeatin hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyladenosine)-hydroxylase activity","type":"exact"},{"name":"tRNA-(ms2io6A)-hydroxylase activity","type":"exact"}],"termid":"GO:0045301"}


id: PBO:0076562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3C","termid":"PBO:0076562"}


id: MONDO:0014205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe feeding difficulties-failure to thrive-microcephaly due to ASXL3 deficiency syndrome","secondary_identifiers":["MEDGEN:1656239","GARD:13259","OMIM:615485","DOID:0080893","NORD:139551","Orphanet:352577","UMLS:C4750837"],"synonyms":[{"name":"ASXL3-Related Disorder","type":"exact"},{"name":"BAINBRIDGE-ROPERS syndrome","type":"related"},{"name":"BRPS","type":"related"},{"name":"Bainbridge-Roppers syndrome","type":"exact"},{"name":"severe feeding difficulties-failure to thrive-microcephaly due to ASXL3 deficiency syndrome","type":"exact"}],"termid":"MONDO:0014205","xrefs":{"Monarch":{"xref_id":"0014205"}}}


id: GO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of digestive system process","termid":"GO:0060457"}


id: GO:0102734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: castasterone + O2 + reduced [NADPH--hemoprotein reductase] = brassinolide + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Broad specificity for several brassinosteroids, including castasterone, teasterone, and typhasterol.","definition_xrefs":["EC:1.14.14.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"brassinolide synthase activity","secondary_identifiers":["MetaCyc:RXN-720"],"termid":"GO:0102734"}


id: MONDO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete beeturia (obsolete MONDO:0044218)","secondary_identifiers":["OMIM:109600"],"synonyms":[{"name":"BEETURIA","type":"related"},{"name":"Betacyaninuria","type":"related"}],"termid":"MONDO:0044218","xrefs":{"Monarch":{"xref_id":"0044218"}}}


id: PBO:0029272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029272"}


id: PBO:0063405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 1","termid":"PBO:0063405"}


id: MONDO:0003454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the conjunctiva.","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"conjunctival cancer","secondary_identifiers":["MEDGEN:56316","NCIT:C3564","SCTID:363463000","UMLS:C0153628","ICD9:190.3","DOID:5467"],"synonyms":[{"name":"cancer of conjunctiva","type":"broad"},{"name":"conjunctiva cancer","type":"exact"},{"name":"conjunctival tumor","type":"broad"},{"name":"conjunctival tumour","type":"broad"},{"name":"malignant conjunctiva neoplasm","type":"exact"},{"name":"malignant conjunctiva tumor","type":"exact"},{"name":"malignant conjunctiva tumour","type":"exact"},{"name":"malignant conjunctival neoplasm","type":"exact"},{"name":"malignant conjunctival tumor","type":"exact"},{"name":"malignant conjunctival tumour","type":"exact"},{"name":"malignant neoplasm of conjunctiva","type":"exact"},{"name":"malignant neoplasm of conjunctiva (primary)","type":"exact"},{"name":"malignant neoplasm of the conjunctiva","type":"exact"},{"name":"malignant tumor of conjunctiva","type":"exact"},{"name":"malignant tumor of the conjunctiva","type":"exact"},{"name":"malignant tumour of conjunctiva","type":"exact"},{"name":"malignant tumour of the conjunctiva","type":"exact"}],"termid":"MONDO:0003454","xrefs":{"Monarch":{"xref_id":"0003454"}}}


id: MONDO:0011600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and prolonged opening and activity of the acetylcholine receptor channel that has material basis in heterozygous or rarely biallelic mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","PMID:7531341","DOID:0110678","PMID:12141316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4A","secondary_identifiers":["GARD:15387","UMLS:C4225413","MEDGEN:908188","OMIM:605809"],"synonyms":[{"name":"CMS Ia1","type":"exact"},{"name":"CMS1A1","type":"exact"},{"name":"CMS4A","type":"exact"},{"name":"Cms Ia1","type":"related"},{"name":"Cms Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrome 4A slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4A","type":"exact"},{"name":"congenital myasthenic syndrome type Ia1","type":"related"},{"name":"congenital myasthenic syndrome type Ia1, formerly","type":"related"},{"name":"congenital myasthenic syndrometype Ia1","type":"exact"},{"name":"myasthenic syndrome, congenital, 4A, slow-channel","type":"related"}],"termid":"MONDO:0011600","xrefs":{"Monarch":{"xref_id":"0011600"}}}


id: PBO:0080747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 2","termid":"PBO:0080747"}


id: GO:0033740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: hydroxylamine + NH3 = hydrazine + H2O, and hydrazine + acceptor = N2 + reduced acceptor.","definition_xrefs":["EC:1.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine oxidoreductase activity","secondary_identifiers":["RHEA:23232","MetaCyc:1.7.99.8-RXN"],"synonyms":[{"name":"hydroxylamine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0033740"}


id: MONDO:0007561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia type 1 (MED 1) is a form of multiple epiphyseal dysplasia that is characterized by normal or mild short stature, pain in the hips and/or knees, progressive deformity of extremities and early-onset osteoarthrosis. Specific features to MED 1 include a more pronounced involvement of hip joints and gait abnormality and a shorter adult height. MED1 is allelic to pseudoachondroplasia with which it shares clinical and radiological features. The disease follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:93308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"COMP-related skeletal dysplasia","termid":"MONDO:0100593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia type 1","secondary_identifiers":["OMIM:132400","SCTID:715673002","MEDGEN:325376","DOID:0070303","icd11.foundation:2130489957","UMLS:C1838280","GARD:2180","ICD10CM:Q77.3"],"synonyms":[{"name":"COMP multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM1","type":"exact"},{"name":"MED1","type":"exact"},{"name":"Polyepiphyseal dysplasia type 1","type":"exact"},{"name":"epiphyseal dysplasia multiple 1","type":"related"},{"name":"epiphyseal dysplasia, Fairbank type","type":"related"},{"name":"epiphyseal dysplasia, multiple, 1","type":"related"},{"name":"epiphyseal dysplasia, multiple, type 1","type":"exact"},{"name":"epiphyseal dysplasia, ribbing type","type":"related"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COMP","type":"exact"},{"name":"multiple epiphyseal dysplasia 1","type":"related"},{"name":"multiple epiphyseal dysplasia COMP-related","type":"related"},{"name":"multiple epiphyseal dysplasia, Comp-related","type":"related"}],"termid":"MONDO:0007561","xrefs":{"Monarch":{"xref_id":"0007561"}}}


id: PBO:0063434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 8","termid":"PBO:0063434"}


id: GO:0035491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukotriene production involved in inflammatory response","termid":"GO:0035491"}


id: PBO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IA","termid":"PBO:0061546"}


id: PBO:0059538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site X","termid":"PBO:0059538"}


id: PR:Q9UUB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NFU1 iron-sulfur cluster scaffold, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11178:SF0","OMA:SCHPO02733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein C1709.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.19c","secondary_identifiers":["UniProtKB:Q9UUB8"],"synonyms":[{"name":"Spom972h-NFU1","type":"exact"}],"termid":"PR:Q9UUB8"}


id: GO:2000309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:2000307"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"positive regulation of RANKL production","type":"exact"},{"name":"positive regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000309"}


id: FYECO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cells are grown in a culture, and wild-type cells of the opposite mating type are added to the culture.","definition_xrefs":["PMID:30279276","PomBase:mah","PomBase:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild type cells of opposite mating type added to culture","synonyms":[{"name":"mating with WT","type":"related"}],"termid":"FYECO:0000383"}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: MONDO:0012635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type IIh is characterized by severe psychomotor retardation, failure to thrive and intolerance to wheat and dairy products.","definition_xrefs":["Orphanet:95428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"COG8-congenital disorder of glycosylation","secondary_identifiers":["DOID:0070260","SCTID:717774004","OMIM:611182","GARD:12411","UMLS:C1970021","MEDGEN:409971","MESH:C566987"],"synonyms":[{"name":"CDG IIh","type":"related"},{"name":"CDG syndrome type IIh","type":"exact"},{"name":"CDG-IIh","type":"exact"},{"name":"CDG2H","type":"exact"},{"name":"COG8-CDG","type":"exact"},{"name":"COG8-CDG (CDG-IIh)","type":"related"},{"name":"COG8-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIh","type":"exact"},{"name":"congenital disorder of glycosylation type 2h","type":"exact"},{"name":"congenital disorder of glycosylation type IIh","type":"exact"},{"name":"congenital disorder of glycosylation, type IIh","type":"related"}],"termid":"MONDO:0012635","xrefs":{"Monarch":{"xref_id":"0012635"}}}


id: GO:0033545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C.","definition_xrefs":["GOC:mah","MetaCyc:PWY-6555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process","termid":"GO:0010264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, lipid-dependent","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthetic process, lipid-dependent","type":"exact"}],"termid":"GO:0033545"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: PBO:0044190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin C","termid":"PBO:0044190"}


id: PBO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus","termid":"PBO:0031851"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["GOC:dph","PMID:18329362","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: FYPO:0001971
data:
  {"alleles_by_uniquename":{"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118940],"is_not":false,"summary":null,"term":"FYPO:0001971"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a chain of cells. Cells in the chain visually resemble wild-type cells, except that they remain connected, often via remnants of septum edging material, and may continue to undergo normal mitosis and septum formation.","definition_xrefs":["PMID:8873452","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":1,"genotypes_by_uniquename":{"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in chained cells","references_by_uniquename":{"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444"],"single_locus_genotype_uniquenames":["agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in chained cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in chained cells during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in chained cells","type":"exact"},{"name":"cell clumping","type":"related"},{"name":"clumped cells","type":"related"}],"termid":"FYPO:0001971","terms_by_termid":{"FYPO:0001971":null}}


id: PBO:0079251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23 antisense RNA 1","termid":"PBO:0079251"}


id: MONDO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fallopian tube carcinoma that has developed in relatives of patients that have a history of fallopian tube carcinoma.","definition_xrefs":["NCIT:C40455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hereditary fallopian tube carcinoma","secondary_identifiers":["UMLS:C1512418","DOID:7266","MEDGEN:307556"],"synonyms":[{"name":"familial fallopian tube carcinoma","type":"exact"},{"name":"familiar fallopian tube carcinoma","type":"related"},{"name":"hereditary fallopian tube cancer","type":"exact"},{"name":"hereditary fallopian tube carcinoma","type":"exact"}],"termid":"MONDO:0004166","xrefs":{"Monarch":{"xref_id":"0004166"}}}


id: PBO:0057126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 210","termid":"PBO:0057126"}


id: GO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hepatocyte growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8852405"],"synonyms":[{"name":"HGF receptor signaling pathway","type":"exact"},{"name":"HGF receptor signalling pathway","type":"exact"},{"name":"Met signaling pathway","type":"narrow"}],"termid":"GO:0048012"}


id: MONDO:0011128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sheldon-Hall syndrome (SHS) is a rare multiple congenital contracture syndrome characterized by contractures of the distal joints of the limbs, triangular face, downslanting palpebral fissures, small mouth, and high arched palate.","definition_xrefs":["Orphanet:1147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sheldon-hall syndrome","secondary_identifiers":["MEDGEN:320374","DOID:0111599","GARD:16556","icd11.foundation:1206883656","UMLS:C1834523"],"synonyms":[{"name":"DA2B","type":"exact"},{"name":"Freeman Sheldon syndrome, variant","type":"related"},{"name":"Freeman Sheldon variant","type":"related"},{"name":"Freeman-Sheldon syndrome variant","type":"exact"},{"name":"Sheldon-Hall syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita distal type II with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type II, with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"exact"},{"name":"distal arthrogryposis type 2B","type":"exact"}],"termid":"MONDO:0011128","xrefs":{"Monarch":{"xref_id":"0011128"}}}


id: FYPO:0005757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more membranes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to membrane during mitotic cell cycle","type":"related"},{"name":"protein absent from membrane during vegetative growth","type":"related"},{"name":"protein localization to membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005757"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["GOC:add","PMID:12925704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: PBO:0073417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET like protein","termid":"PBO:0073417"}


id: MONDO:0009720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multiple congenital anomalies syndrome characterized by facial dysmorphism (hypertelorism, broad and high nasal bridge, depressed nasal ridge, short columella, underdeveloped maxilla, and prominent cupid-bow upper lip vermillion), mild to severe congenital sensorineural hearing loss, and skeletal abnormalities consisting of brachytelephalangy and broad thumbs and halluces with large, rounded epiphyses. Additional manifestations that have been reported include pulmonary valve stenosis, voice hoarseness and renal agenesis.","definition_xrefs":["Orphanet:2662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Keipert syndrome","secondary_identifiers":["OMIM:255980","DOID:0111842","GARD:267","SCTID:763774001","UMLS:C1850627","MEDGEN:338088","MESH:C538337","NCIT:C186306","OMIM:301026"],"synonyms":[{"name":"KPTS","type":"exact"},{"name":"Keipert syndrome","type":"exact"},{"name":"Keipert syndrome, X-linked recessive","type":"exact"},{"name":"nasodigitoacoustic syndrome","type":"exact"},{"name":"nasodigitoacoustic syndrome, formerly","type":"exact"}],"termid":"MONDO:0009720","xrefs":{"Monarch":{"xref_id":"0009720"}}}


id: GO:0019842
data:
  {"annotated_genes":["SJAG_04178","SJAG_03914","SJAG_03961","SJAG_03861","SJAG_03306","SJAG_04145","SJAG_00830","SJAG_00869","SJAG_03671","SJAG_00097","SJAG_00706","SJAG_00186","SJAG_03312","SJAG_03055","SJAG_03102","SJAG_04988","SJAG_02305","SJAG_02734","SJAG_03362","SJAG_04031","SJAG_00582","SJAG_02205","SJAG_02791","SJAG_00432","SJAG_01019","SJAG_04678","SJAG_03434","SJAG_03985","SJAG_00495","SJAG_00714","SJAG_00673","SJAG_00937","SJAG_01766","SJAG_02464","SJAG_03743","SJAG_04842","SJAG_04149","SJAG_02972","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59553,65966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"},{"annotations":[76185,57220,67734,60600,110014,69408,73836,81083,65653,70417,72284,71641,66560,58062,68915,64413,67464,75096,80185,81370,66800,75939,70211,62338,66328,66745,58413,69456,67693,74219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"},{"annotations":[68503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"},{"annotations":[65527,57592,62443,74999,59284,58837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00706":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03362":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_03985":null,"SJAG_04031":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04842":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019842","terms_by_termid":{"GO:0030170":null,"GO:0030975":null,"GO:0030976":null,"GO:0031177":null}}


id: GO:0031528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"microvillus","termid":"GO:0005902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"microvillus membrane","termid":"GO:0031528"}


id: PBO:0070727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 32","termid":"PBO:0070727"}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: PR:Q9UTK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuftelin-interacting protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23329:SF1","PRO:DNx","OMA:SCHPO01334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain-containing protein C1486.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.03c","secondary_identifiers":["UniProtKB:Q9UTK6"],"synonyms":[{"name":"Spom972h-TFIP11","type":"exact"}],"termid":"PR:Q9UTK6"}


id: PBO:0082203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; type II membrane protein; member of the KRE2/MNT1 mannosyltransferase family; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0082203"}


id: PBO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-12","termid":"PBO:0051291"}


id: GO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by a neurotransmitter. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}


id: PBO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U6","termid":"PBO:0001612"}


id: PBO:0077372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM109 divergent transcript","termid":"PBO:0077372"}


id: MONDO:0003788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the testis during childhood.","definition_xrefs":["NCIT:C6545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"testicular embryonal carcinoma","termid":"MONDO:0006446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood embryonal testis carcinoma","secondary_identifiers":["MEDGEN:272470","DOID:6162","UMLS:C1333007"],"synonyms":[{"name":"childhood embryonal carcinoma of testis","type":"exact"},{"name":"childhood embryonal carcinoma of the testis","type":"exact"},{"name":"childhood testicular embryonal carcinoma","type":"exact"},{"name":"paediatric embryonal carcinoma of testis","type":"exact"},{"name":"paediatric embryonal carcinoma of the testis","type":"exact"},{"name":"paediatric testicular embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of testis","type":"exact"},{"name":"pediatric embryonal carcinoma of the testis","type":"exact"},{"name":"pediatric testicular embryonal carcinoma","type":"exact"},{"name":"testicular embryonal carcinoma of childhood","type":"exact"}],"termid":"MONDO:0003788","xrefs":{"Monarch":{"xref_id":"0003788"}}}


id: PBO:0081597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 3","termid":"PBO:0081597"}


id: PBO:0062781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 3 pseudogene","termid":"PBO:0062781"}


id: MONDO:0017219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microform holoprosencephaly is a benign form of holoprosencephaly (HPE) characterized by midline defects without the typical HPE defect in brain cleavage.","definition_xrefs":["Orphanet:280200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microform holoprosencephaly","secondary_identifiers":["MEDGEN:1711978","GARD:17290","UMLS:C5393309","ICD10CM:Q04.2","DOID:0111380","icd11.foundation:44293173"],"synonyms":[{"name":"HPE, minor form","type":"exact"},{"name":"HPE-L","type":"exact"},{"name":"HoloprosencC)phalie, minor form","type":"exact"},{"name":"Holoprosencéphalie, minor form","type":"exact"},{"name":"Microform HPE","type":"exact"},{"name":"holoprosencephaly-like","type":"exact"}],"termid":"MONDO:0017219","xrefs":{"Monarch":{"xref_id":"0017219"}}}


id: PBO:0065718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 4","termid":"PBO:0065718"}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: PBO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member A","termid":"PBO:0047102"}


id: PBO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.11.-","termid":"PBO:0005747"}


id: PR:O94660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrilase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase nit2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.02","secondary_identifiers":["UniProtKB:O94660"],"synonyms":[{"name":"Spom972h-NIT1","type":"exact"}],"termid":"PR:O94660"}


id: PBO:0045497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSG1 antisense RNA 1","termid":"PBO:0045497"}


id: PBO:0043521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3","termid":"PBO:0043521"}


id: GO:0000022
data:
  {"annotated_genes":["SJAG_00773","SJAG_00930","SJAG_00082","SJAG_03073","SJAG_03048","SJAG_04597","SJAG_00244","SJAG_01224","SJAG_04745","SJAG_02624","SJAG_00794","SJAG_02761","SJAG_02246","SJAG_01297","SJAG_01613","SJAG_04841","SJAG_01215","SJAG_04464","SJAG_04003","SJAG_03540","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66710,70183,106983],"is_not":false,"summary":null,"term":"GO:0000022"},{"annotations":[79592,94806,77587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[99901,103075,94265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[99369,96787,99902,98131,100967,103429,107823],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[78946,94267,96788,98740,108424],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[101897],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902845"},{"annotations":[93893,89465],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902846"},{"annotations":[110598],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032888"},{"annotations":[114651],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the mitotic spindle. Mitotic spindle elongation begins during mitotic prophase and ends during mitotic anaphase B.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"},{"relation_name":"part_of","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0007010","GO:0000070"],"is_obsolete":false,"name":"mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1905121"],"synonyms":[{"name":"microtubule sliding involved in mitotic spindle elongation","type":"related"},{"name":"spindle elongation during mitosis","type":"exact"}],"termid":"GO:0000022","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0032888":null,"GO:0051256":null,"GO:0061804":null,"GO:0061805":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null}}


id: PATO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amplitude","termid":"PATO:0000080"}


id: PBO:0028353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CTD_phosphatase_activity","termid":"PBO:0028353"}


id: PBO:0066064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association (RalGDS/AF-6) and pleckstrin homology domains 1","termid":"PBO:0066064"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose-1-phosphate = D-glyceraldehyde + dihydroxyacetone phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","GOC:glycolysis","RHEA:30851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-70342","MetaCyc:RXN-8631","Reactome:R-HSA-5656438"],"termid":"GO:0061609"}


id: GO:0004016
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66288],"is_not":false,"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.","definition_xrefs":["EC:4.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"adenylate cyclase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:15389","Reactome:R-HSA-392129","Reactome:R-HSA-164377","Reactome:R-HSA-5211224","MetaCyc:ADENYLATECYC-RXN","Reactome:R-HSA-170676","Reactome:R-HSA-381607","Reactome:R-HSA-9712183","Reactome:R-HSA-5610727"],"synonyms":[{"name":"3',5'-cyclic AMP synthetase activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing; 3',5'-cyclic-AMP-forming) activity","type":"related"},{"name":"ATP pyrophosphate-lyase activity","type":"related"},{"name":"adenyl cyclase activity","type":"related"},{"name":"adenylyl cyclase activity","type":"exact"},{"name":"adenylylcyclase activity","type":"related"},{"name":"cAMP generating peptide activity","type":"related"}],"termid":"GO:0004016","terms_by_termid":{"GO:0004016":null}}


id: PBO:0066032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 1","termid":"PBO:0066032"}


id: PBO:0068234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 5","termid":"PBO:0068234"}


id: MONDO:0000771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A respiratory system disease with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic respiratory disease","secondary_identifiers":["DOID:0060496","UMLS:C1504369","MEDGEN:734246"],"synonyms":[{"name":"airway allergy","type":"exact"},{"name":"allergic form of respiratory system disease","type":"exact"},{"name":"allergic respiratory system disease","type":"exact"},{"name":"respiratory allergy","type":"exact"}],"termid":"MONDO:0000771","xrefs":{"Monarch":{"xref_id":"0000771"}}}


id: SO:0000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element of an operon to which activators or repressors bind thereby effecting translation of genes in that operon.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"operator","secondary_identifiers":["http://en.wikipedia.org/wiki/Operator_(biology)#Operator"],"synonyms":[{"name":"operator segment","type":"exact"}],"termid":"SO:0000057"}


id: FYPO:0003631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is decreased. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["GO:0071004","PomBase:mah","GO:1903241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased U2-type prespliceosome assembly","synonyms":[{"name":"decreased U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased U2-type prespliceosome assembly during vegetative growth","type":"exact"},{"name":"reduced U2-type prespliceosome assembly","type":"exact"}],"termid":"FYPO:0003631"}


id: GO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental pigmentation","synonyms":[{"name":"down regulation of developmental pigmentation","type":"exact"},{"name":"down-regulation of developmental pigmentation","type":"exact"},{"name":"downregulation of developmental pigmentation","type":"exact"},{"name":"inhibition of pigmentation","type":"narrow"}],"termid":"GO:0048086"}


id: MONDO:0700178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral squamous cell carcinoma that occurs in a cat.","definition_xrefs":["NCIT:C132824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline oral squamous cell carcinoma","termid":"MONDO:0700178","xrefs":{"Monarch":{"xref_id":"0700178"}}}


id: PBO:0027386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube_and_bidirectional_cell_growth_from_spore_body","termid":"PBO:0027386"}


id: PBO:0081369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 207","termid":"PBO:0081369"}


id: GO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any triple helical collagen trimer that forms fibrils.","definition_xrefs":["ISBN:0721639976","GOC:mah","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"fibrillar collagen","termid":"GO:0098643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fibrillar collagen trimer","termid":"GO:0005583"}


id: PR:O13851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.12","synonyms":[{"name":"Spom972h-dlp1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13851"}


id: PR:O42933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.09","secondary_identifiers":["UniProtKB:O42933"],"synonyms":[{"name":"SPBC16C6.09","type":"related"},{"name":"Spom972h-POMT1","type":"exact"},{"name":"oma4","type":"related"}],"termid":"PR:O42933"}


id: GO:0140987
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102385],"is_not":false,"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP from one side of a membrane to the other according to the reaction: ATP(out) + phosphate(in) = ATP(in) + phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATP:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:65840"],"synonyms":[{"name":"ATP:inorganic phosphate antiporter activity","type":"exact"},{"name":"inorganic phosphate:ATP antiporter activity","type":"exact"}],"termid":"GO:0140987","terms_by_termid":{"GO:0140987":null}}


id: MONDO:0015160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0019042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","secondary_identifiers":["Orphanet:102284"],"synonyms":[{"name":"MCA/variable MR","type":"exact"},{"name":"multiple congenital anomalies-variable intellectual disability with or without dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0015160","xrefs":{"Monarch":{"xref_id":"0015160"}}}


id: GO:0097555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right anterior flagellum","synonyms":[{"name":"right anterior cilium","type":"exact"}],"termid":"GO:0097555"}


id: GO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"negatively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular extravasation","synonyms":[{"name":"down regulation of cellular extravasation","type":"exact"},{"name":"down-regulation of cellular extravasation","type":"exact"},{"name":"downregulation of cellular extravasation","type":"exact"},{"name":"inhibition of cellular extravasation","type":"narrow"}],"termid":"GO:0002692"}


id: PR:Q96WW0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein WRAP73 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C32H8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.09","secondary_identifiers":["UniProtKB:Q96WW0"],"synonyms":[{"name":"Spom972h-WRAP73","type":"exact"}],"termid":"PR:Q96WW0"}


id: GO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + protein-cysteine = S-palmitoyl protein + CoA, specific for Ras proteins.","definition_xrefs":["PMID:16000296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-palmitoyltransferase activity","termid":"GO:0019706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"Ras palmitoyltransferase activity","synonyms":[{"name":"DHHC cysteine-rich domain-containing protein ERF2","type":"related"},{"name":"ERF2","type":"related"},{"name":"Ras protein acyltransferase activity","type":"exact"},{"name":"palmitoyltransferase ERF2","type":"related"}],"termid":"GO:0043849"}


id: PBO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 2","termid":"PBO:0001401"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: PBO:0028360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_polynucleotide_5'-phosphatase_activity","termid":"PBO:0028360"}


id: MONDO:0020413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encircling double aortic arch is a very rare congenital anomaly of the great arteries characterized by the presence of two aortic arches (right and left) which encircle and compress the trachea and esophagus, resulting in various respiratory and gastrointestinal symptoms (e.g. harsh breathing, stridor, dyspnea, cyanotic and choking episodes, chronic cough, recurrent respiratory tract infections, dysphagia and reflux). Esophageal atresia and tracheoesophageal fistula have also been reported. It usually occurs isolated, but, on occasion, may be associated with other congenital heart anomalies and chromosomal aberations.","definition_xrefs":["Orphanet:99075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encircling double aortic arch","secondary_identifiers":["NANDO:2200290","GARD:19635","SCTID:764521002","UMLS:C4706940","MEDGEN:1641325"],"termid":"MONDO:0020413","xrefs":{"Monarch":{"xref_id":"0020413"}}}


id: GO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan catabolic process","synonyms":[{"name":"lignan breakdown","type":"exact"},{"name":"lignan catabolism","type":"exact"},{"name":"lignan degradation","type":"exact"}],"termid":"GO:0046273"}


id: PBO:0061950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 2","termid":"PBO:0061950"}


id: MONDO:0007372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cornea plana","termid":"MONDO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana 1, autosomal dominant","secondary_identifiers":["UMLS:C1852557","GARD:18049","MESH:C565158","MEDGEN:343837","OMIM:121400"],"synonyms":[{"name":"CNA1","type":"related"},{"name":"cornea plana 1","type":"related"},{"name":"cornea plana 1, autosomal dominant","type":"exact"}],"termid":"MONDO:0007372","xrefs":{"Monarch":{"xref_id":"0007372"}}}


id: PBO:0086144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal metabolism of the rRNA primary transcript; nucleolar protein; proposed to be involved in ribosome biogenesis","termid":"PBO:0086144"}


id: PBO:0056649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 16","termid":"PBO:0056649"}


id: PBO:0031045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_diamide","termid":"PBO:0031045"}


id: FYPO:0000318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, some cells may divide, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long cells (obsolete FYPO:0000318)","synonyms":[{"name":"inviable microcolony including long cells","type":"exact"},{"name":"inviable mixed population including long vegetative cells","type":"exact"},{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0000318"}


id: PR:O14197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5D6.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C5D6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.04","synonyms":[{"name":"Spom972h-SPAC5D6.04","type":"exact"}],"termid":"PR:O14197"}


id: GO:0075300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of zygospore formation","termid":"GO:0075298"},{"relation_name":"negatively_regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of zygospore formation","termid":"GO:0075300"}


id: FYPO:0004172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to heat","synonyms":[{"name":"decreased protein kinase activity during cellular response to heat stress","type":"exact"},{"name":"reduced protein kinase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0004172"}


id: PBO:0064766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H","termid":"PBO:0064766"}


id: PBO:0086651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole and is induced in response to the DNA-damaging agent MMS; gene expression increases in response to Zymoliase treatment","termid":"PBO:0086651"}


id: GO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of substances between any membrane of a cell, including the plasma membrane and its regions.","definition_xrefs":["GOC:ai","PMID:10671554","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete intermembrane transport (obsolete GO:0046909)","termid":"GO:0046909"}


id: PBO:0067135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 183, pseudogene","termid":"PBO:0067135"}


id: PBO:0080456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSTM2A overlapping transcript 1","termid":"PBO:0080456"}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachlorobenzene dioxygenase activity (obsolete GO:0034935)","termid":"GO:0034935"}


id: MONDO:0007349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cold autoinflammatory syndrome in which the cause of the disease is a mutation in the NLRP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 1","secondary_identifiers":["OMIM:120100","DOID:0090062","GARD:15051","MEDGEN:1647324","SCTID:238687000","UMLS:C4551895"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 1","type":"related"},{"name":"FCAS1","type":"related"},{"name":"Fcas","type":"related"},{"name":"NLRP3 familial cold autoinflammatory syndrome","type":"exact"},{"name":"cold hypersensitivity","type":"related"},{"name":"cold urticaria, familial","type":"related"},{"name":"cold-induced autoinflammatory syndrome, familial","type":"related"},{"name":"familial cold autoinflammatory syndrome 1","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRP3","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 1","type":"exact"},{"name":"familial cold inflammatory syndrome 1","type":"exact"}],"termid":"MONDO:0007349","xrefs":{"Monarch":{"xref_id":"0007349"}}}


id: FYPO:0007192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rapid, back-and-forth movement of the mitotic spindle pole body (SPB), and associated chromosome movement, do not occur. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abolished mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abolished spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abolished spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body oscillation abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007192"}


id: PBO:0066371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 14","termid":"PBO:0066371"}


id: MONDO:0037254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitional cell neoplasm","secondary_identifiers":["UMLS:C0334265","MEDGEN:90754","NCIT:C6783"],"synonyms":[{"name":"transitional cell neoplasm","type":"exact"},{"name":"transitional cell tumor","type":"exact"},{"name":"transitional cell tumour","type":"exact"}],"termid":"MONDO:0037254","xrefs":{"Monarch":{"xref_id":"0037254"}}}


id: PBO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 2 pseudogene 1","termid":"PBO:0048526"}


id: PBO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 3","termid":"PBO:0045977"}


id: MONDO:0017061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iniencephaly","termid":"MONDO:0018968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"closed iniencephaly","secondary_identifiers":["icd11.foundation:1780502952","GARD:20950","SCTID:203927003","UMLS:C0431286","MEDGEN:608901","Orphanet:268366"],"termid":"MONDO:0017061","xrefs":{"Monarch":{"xref_id":"0017061"}}}


id: GO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid-containing layer of cuticle that lies between the cortical layer and the surface coat. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","GOC:kmv","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"epicuticle of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"epicuticle of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060105"}


id: PBO:0091280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp10","termid":"PBO:0091280"}


id: PBO:0040574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-glucuronyltransferase 1","termid":"PBO:0040574"}


id: PBO:0029867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions","termid":"PBO:0029867"}


id: PR:O94452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp1 gene.","definition_xrefs":["UniProtKB:O94452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.10","synonyms":[{"name":"Spom972h-mcp1","type":"exact"}],"termid":"PR:O94452"}


id: MONDO:0010683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare X-linked congenital myopathy characterized by numerous centrally placed nuclei on muscle biopsy and that presents at birth with marked weakness, hypotonia and respiratory failure.","definition_xrefs":["Orphanet:596"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital structural myopathy","termid":"MONDO:0002921"},{"relation_name":"excluded_subClassOf","term_name":"obsolete qualitative or quantitative defects of myotubularin (obsolete MONDO:0016154)","termid":"MONDO:0016154"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myotubular myopathy","secondary_identifiers":["NCIT:C118781","SCTID:46804001","OMIM:310400","UMLS:C0410203","GARD:11925","DOID:0111225","MEDGEN:98374"],"synonyms":[{"name":"CNMX","type":"related"},{"name":"MTM","type":"exact"},{"name":"X-linked centronuclear myopathy","type":"exact"},{"name":"X-linked myotubular myopathy","type":"exact"},{"name":"XLCNM","type":"exact"},{"name":"XLMTM","type":"exact"},{"name":"centronuclear myopathy, X-linked","type":"exact"},{"name":"myopathy, centronuclear, X-linked","type":"related"},{"name":"myotubular myopathy 1","type":"related"},{"name":"myotubular myopathy, X-linked","type":"related"},{"name":"myotubular myopathy, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010683","xrefs":{"Monarch":{"xref_id":"0010683"}}}


id: GO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling dorso-laterally into the ectoderm and continuing toward the ventral midline of the belly. These migrating trunk neural crest cells become melanocytes, the melanin-forming pigment cells.","definition_xrefs":["GOC:bf","GOC:mat","GOC:PARL","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsolateral trunk neural crest cell migration","synonyms":[{"name":"dorsolateral trunk NCC migration","type":"exact"}],"termid":"GO:0036485"}


id: MONDO:0011937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CSTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"},{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 4","secondary_identifiers":["UMLS:C4225407","DOID:0070523","GARD:18426","MESH:C564309","OMIM:607936","MEDGEN:895692"],"synonyms":[{"name":"CSTA peeling skin syndrome","type":"exact"},{"name":"PSS4","type":"related"},{"name":"ichthyosis bullosa of Siemens-like","type":"related"},{"name":"ichthyosis, exfoliative, autosomal recessive","type":"related"},{"name":"peeling skin syndrome 4","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CSTA","type":"exact"},{"name":"peeling skin syndrome type 4","type":"exact"}],"termid":"MONDO:0011937","xrefs":{"Monarch":{"xref_id":"0011937"}}}


id: PBO:0040726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 1","termid":"PBO:0040726"}


id: GO:0097232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"lamellar body membrane","termid":"GO:0097232"}


id: PBO:0089925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Ape4","termid":"PBO:0089925"}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["GOC:jid","PMID:2279698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: GO:0009786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of asymmetric cell division","termid":"GO:0009786"}


id: PBO:0051867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon stimulated exonuclease gene 20 like 2","termid":"PBO:0051867"}


id: PBO:0056701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 2","termid":"PBO:0056701"}


id: PBO:0004279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type","termid":"PBO:0004279"}


id: PBO:0048646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 6","termid":"PBO:0048646"}


id: PBO:0082885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity","termid":"PBO:0082885"}


id: MONDO:0958006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Guo-Campeau type","secondary_identifiers":["OMIM:620663","UMLS:C5882737","MEDGEN:1844202"],"termid":"MONDO:0958006","xrefs":{"Monarch":{"xref_id":"0958006"}}}


id: MONDO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentin dysplasia type II (DD-II) is a rare mild form of dentin dysplasia (DD) characterized by normal tooth roots but abnormal primary dentition.","definition_xrefs":["Orphanet:99791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dentin dysplasia","termid":"MONDO:0015613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin dysplasia type II","secondary_identifiers":["UMLS:C1527284","SCTID:109494000","GARD:1806","MEDGEN:315928","OMIM:125420","ICD9:520.5"],"synonyms":[{"name":"DD-II","type":"exact"},{"name":"DTDP2","type":"exact"},{"name":"Dtdp2","type":"related"},{"name":"anomalous dysplasia of dentin","type":"related"},{"name":"coronal dentin dysplasia","type":"related"},{"name":"dentin dyspalsia, Shields type 2","type":"related"},{"name":"dentin dysplasia, Shields type 2","type":"related"},{"name":"dentin dysplasia, coronal","type":"related"},{"name":"dentin dysplasia, type 2","type":"related"},{"name":"dentin dysplasia, type II","type":"related"},{"name":"pulp stones","type":"related"},{"name":"pulpal dysplasia","type":"related"}],"termid":"MONDO:0007437","xrefs":{"Monarch":{"xref_id":"0007437"}}}


id: GO:0003184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the pulmonary valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"pulmonary valve development","termid":"GO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve morphogenesis","termid":"GO:0003184"}


id: PBO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G2","termid":"PBO:0061587"}


id: PBO:0114420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 3","termid":"PBO:0114420"}


id: PBO:0056426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 1","termid":"PBO:0056426"}


id: PBO:0003867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.64","termid":"PBO:0003867"}


id: RO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of upstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"},{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"RO:0002427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of","termid":"RO:0002404"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: MONDO:0010225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dent disease type 1 is a type of Dent disease with predominantly renal manifestations.","definition_xrefs":["Orphanet:93622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dent disease","termid":"MONDO:0015612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease type 1","secondary_identifiers":["OMIM:300009","SCTID:717789008","DOID:0081453","MEDGEN:336322","UMLS:C1848336","GARD:1804","icd11.foundation:1984074789"],"synonyms":[{"name":"CLCN5 Dent disease","type":"exact"},{"name":"DENT disease 1","type":"related"},{"name":"Dent disease caused by mutation in CLCN5","type":"exact"},{"name":"Dent disease type 1","type":"exact"},{"name":"dent disease 1, X-linked recessive","type":"exact"},{"name":"nephrolithiasis 2","type":"related"},{"name":"nephrolithiasis type 1","type":"exact"},{"name":"nephrolithiasis, hypercalciuric, X-linked","type":"related"},{"name":"urolithiasis, hypercalciuric, X-linked","type":"related"}],"termid":"MONDO:0010225","xrefs":{"Monarch":{"xref_id":"0010225"}}}


id: GO:0010461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic ion by a channel that opens in response to a light stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"light-activated monoatomic ion channel activity","termid":"GO:0010461"}


id: MONDO:1012834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in dogs due to a mutation in the LAMB3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa, dog","termid":"MONDO:1011548"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMB3-related, dog","secondary_identifiers":["OMIA:002269-9615"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMB3-related, dog","type":"exact"}],"termid":"MONDO:1012834","xrefs":{"Monarch":{"xref_id":"1012834"}}}


id: GO:0019212
data:
  {"annotated_genes":["SJAG_04627","SJAG_03309","SJAG_02380","SJAG_03272","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72053,88843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[76372,77822,87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019212","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: MONDO:1012841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in sheep due to a mutation in the TNNT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, sheep","termid":"MONDO:1010913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, TNNT1-related, sheep","secondary_identifiers":["OMIA:002285-9940"],"synonyms":[{"name":"OCPMD","type":"exact"},{"name":"ovine congenital progressive muscular dystrophy","type":"related"}],"termid":"MONDO:1012841","xrefs":{"Monarch":{"xref_id":"1012841"}}}


id: GO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of its transcription as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont transcription in response to host (obsolete GO:0075181)","termid":"GO:0075181"}


id: PBO:0085834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress; has potential orthologs in Saccharomyces species and in Yarrowia lipolytica","termid":"PBO:0085834"}


id: PBO:0113143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; Ypt1p is the preferred in vitro substrate but also acts on Sec4p, Ypt31p and Ypt32p; involved in the regulation of ER to Golgi vesicle transport; localizes to the ER and peroxisomes","termid":"PBO:0113143"}


id: PBO:0067126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 172, pseudogene","termid":"PBO:0067126"}


id: PBO:0080798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 4","termid":"PBO:0080798"}


id: GO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP catabolic process (obsolete GO:0030829)","synonyms":[{"name":"regulation of cGMP breakdown","type":"exact"},{"name":"regulation of cGMP catabolism","type":"exact"},{"name":"regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030829"}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PR:Q9P4X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp7 gene.","definition_xrefs":["UniProtKB:Q9P4X3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.03c","synonyms":[{"name":"Spom972h-utp7","type":"exact"},{"name":"U three protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X3"}


id: GO:0006713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucocorticoid catabolic process","synonyms":[{"name":"glucocorticoid breakdown","type":"exact"},{"name":"glucocorticoid catabolism","type":"exact"},{"name":"glucocorticoid degradation","type":"exact"}],"termid":"GO:0006713"}


id: GO:0080077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a trihydroxyferuloyl spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080077"}


id: PBO:0066184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM7 pseudogene 1","termid":"PBO:0066184"}


id: GO:0150091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and two or more dendritic spines protruding either from a single dendrite or from multiple dendrites.","definition_xrefs":["GOC:bc","PMID:10586883","PMID:24487234","PMID:7482800","PMID:22028887","PMID:8366344","PMID:11248111","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple spine synapse organization","termid":"GO:0150089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization, multiple dendrites","termid":"GO:0150091"}


id: PBO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf2","termid":"PBO:0003255"}


id: MONDO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract resulting from hypocalcemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"tetanic cataract","secondary_identifiers":["MEDGEN:52678","DOID:13822","icd11.foundation:2073255301","ICD9:366.42","SCTID:68216000","NCIT:C35068","UMLS:C0039613"],"synonyms":[{"name":"hypocalcaemic cataract","type":"exact"}],"termid":"MONDO:0001811","xrefs":{"Monarch":{"xref_id":"0001811"}}}


id: GO:0046111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthine biosynthetic process","synonyms":[{"name":"xanthine anabolism","type":"exact"},{"name":"xanthine biosynthesis","type":"exact"},{"name":"xanthine formation","type":"exact"},{"name":"xanthine synthesis","type":"exact"}],"termid":"GO:0046111"}


id: MONDO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hair follicle neoplasm","termid":"MONDO:0003413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"follicular infundibulum tumor","secondary_identifiers":["SCTID:254694002","DOID:8426","MEDGEN:138031","UMLS:C0346006","ICD9:239.2","NCIT:C4469"],"synonyms":[{"name":"basal cell hamartoma with follicular differentiation","type":"exact"},{"name":"follicular infundibulum neoplasm","type":"exact"},{"name":"neoplasm of the follicular infundibulum","type":"exact"},{"name":"tumor of follicular infundibulum","type":"exact"},{"name":"tumor of the follicular infundibulum","type":"exact"},{"name":"tumour of follicular infundibulum","type":"exact"},{"name":"tumour of the follicular infundibulum","type":"exact"}],"termid":"MONDO:0004560","xrefs":{"Monarch":{"xref_id":"0004560"}}}


id: MONDO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile striato thalamic degeneration","secondary_identifiers":["GARD:3004","Orphanet:1575"],"termid":"MONDO:0043108","xrefs":{"Monarch":{"xref_id":"0043108"}}}


id: MONDO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary hyperferritinemia with congenital cataracts is characterized by the association of early onset (although generally absent at birth) cataract with persistently raised plasma ferritin concentrations in the absence of iron overload.","definition_xrefs":["Orphanet:163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary hyperferritinemia with congenital cataracts","secondary_identifiers":["UMLS:C1833213","OMIM:600886","MEDGEN:318812","ICD9:366.44","ICD9:289.89","DOID:0111256","SCTID:702398007","NORD:1264","GARD:2806","MESH:C538137"],"synonyms":[{"name":"Bonneau-Beaumont syndrome","type":"exact"},{"name":"HHCS","type":"exact"},{"name":"HRFTC","type":"related"},{"name":"Hyperferritinemia Cataract Syndrome","type":"exact"},{"name":"cataract-hyperferritinemia syndrome","type":"related"},{"name":"hereditary hyperferritinemia cataract syndrome","type":"related"},{"name":"hereditary hyperferritinemia-cataract syndrome","type":"exact"},{"name":"hyperferritinemia cataract syndrome","type":"related"},{"name":"hyperferritinemia with or without cataract","type":"related"},{"name":"hyperferritinemia, hereditary, with congenital cataracts","type":"related"},{"name":"hyperferritinemia-cataract syndrome","type":"related"}],"termid":"MONDO:0010952","xrefs":{"Monarch":{"xref_id":"0010952"}}}


id: SO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A site of sequence variation (alteration). Alternative sequence due to naturally occurring events such as polymorphisms and alternative splicing or experimental methods such as site directed mutagenesis.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_variation_site","secondary_identifiers":["BS:00336"],"synonyms":[{"name":"sequence_variations","type":"exact"}],"termid":"SO:0001146"}


id: PBO:0082472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast","termid":"PBO:0082472"}


id: MONDO:0043330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complication of cholelithiasis characterized by obstructive jaundice; abdominal pain, and fever.","definition_xrefs":["MESH:D057792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic cholestasis","termid":"MONDO:0006757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Mirizzi syndrome","secondary_identifiers":["GARD:10177","icd11.foundation:381742412","MEDGEN:120605","SCTID:4283007","Orphanet:521219","UMLS:C0267878"],"synonyms":[{"name":"Mirizzi syndrome","type":"exact"},{"name":"Mirizzi's syndrome","type":"related"},{"name":"Mirizzis syndrome","type":"related"},{"name":"hepatic duct dystonia syndrome","type":"related"},{"name":"mirizzi's syndrome","type":"exact"},{"name":"syndrome, Mirizzi","type":"related"},{"name":"syndrome, Mirizzi's","type":"related"}],"termid":"MONDO:0043330","xrefs":{"Monarch":{"xref_id":"0043330"}}}


id: GO:0016631
data:
  {"annotated_genes":["SJAG_02007","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[94503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02007":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Enoyl-acyl_carrier_protein_reductase"],"synonyms":[{"name":"enoyl-ACP reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier-protein] reductase activity","type":"broad"},{"name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","type":"exact"},{"name":"enoyl-acyl carrier protein reductase","type":"exact"}],"termid":"GO:0016631","terms_by_termid":{"GO:0004318":null,"GO:0141148":null}}


id: GO:0015827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tryptophan, 2-amino-3-(1H-indol-3-yl)propanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tryptophan transport","synonyms":[{"name":"L-tryptophan transport","type":"narrow"}],"termid":"GO:0015827"}


id: MONDO:0008928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-ataxia-deafness syndrome is characterized by mild intellectual deficit, congenital cataract, progressive sensorineural deafness and ataxia. It has been described in two sisters. The inheritance is likely to be autosomal recessive.","definition_xrefs":["Orphanet:1368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-ataxia-deafness syndrome","secondary_identifiers":["UMLS:C0796123","MESH:C538283","GARD:1141","MEDGEN:163216","OMIM:212710"],"synonyms":[{"name":"Begeer syndrome","type":"related"},{"name":"cataract ataxia deafness","type":"related"},{"name":"cataract ataxia deafness syndrome","type":"related"},{"name":"cataract-ataxia-deafness-retardation syndrome","type":"related"},{"name":"polyneuropathy, cataract, deafness syndrome","type":"related"},{"name":"polyneuropathy-cataract-deafness syndrome","type":"related"}],"termid":"MONDO:0008928","xrefs":{"Monarch":{"xref_id":"0008928"}}}


id: PBO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2479","termid":"PBO:0055063"}


id: SO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where there may have been an error in the assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_assembly_error","synonyms":[{"name":"possible assembly error","type":"exact"}],"termid":"SO:0000702"}


id: PBO:0071184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 25","termid":"PBO:0071184"}


id: PBO:0031060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mixed_population_(obsolete_FYPO:0000317)","termid":"PBO:0031060"}


id: MONDO:0012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 5","secondary_identifiers":["OMIM:609299","GARD:15455","MEDGEN:373085","UMLS:C1836436","MESH:C563744"],"synonyms":[{"name":"HPC5","type":"related"},{"name":"prostate cancer, hereditary, 5","type":"exact"},{"name":"prostate cancer, hereditary, type 5","type":"exact"}],"termid":"MONDO:0012244","xrefs":{"Monarch":{"xref_id":"0012244"}}}


id: MONDO:8000011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of chronic intestinal pseudoobstruction caused by a developmental failure of the enteric neurons to differentiate or migrate properly and manifests as a bowel obstruction.","definition_xrefs":["Orphanet:99811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal intestinal dysplasia","termid":"MONDO:0000858"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"},{"relation_name":"is_a","term_name":"visceral neuropathy, familial","termid":"MONDO:0023961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 1, autosomal recessive","secondary_identifiers":["UMLS:C1855733","MESH:C537394","OMIM:243180","MEDGEN:340946","DOID:0080679","GARD:3928"],"synonyms":[{"name":"Argyrophil myenteric plexus deficiency of","type":"related"},{"name":"Argyrophil myenteric plexus, deficiency of","type":"related"},{"name":"NID A","type":"related"},{"name":"intestinal pseudoobstruction due to neuronal disease","type":"related"},{"name":"neuronal intestinal dysplasia, type a","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal neuronal type","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, neuronal type","type":"related"},{"name":"visceral neuropathy familial","type":"related"},{"name":"visceral neuropathy, familial, autosomal recessive","type":"related"}],"termid":"MONDO:8000011","xrefs":{"Monarch":{"xref_id":"8000011"}}}


id: PBO:0057602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 939","termid":"PBO:0057602"}


id: GO:0097628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a distal tip cell.","definition_xrefs":["PMID:24968003","CL:0000661","GOC:mm2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tip cell migration","termid":"GO:0097628"}


id: GO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway that starts with an opsin being activated by a photon, and transmitting the signal through the Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). The second messengers, including cGMP, activate channels that result in transmission of the light signal  through the synapses. Typical examples are rhabdomeric photoreceptors in the eyes of protostomes.","definition_xrefs":["PMID:8823931","PMID:22498302","PMID:19720651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating opsin-mediated signaling pathway","synonyms":[{"name":"PLC-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"rhodopsin mediated G protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G protein signalling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signalling, coupled to IP3 second messenger","type":"narrow"}],"termid":"GO:0030265"}


id: PBO:0028632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-mRNA_level","termid":"PBO:0028632"}


id: GO:1905304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["PMID:16151019","GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0030036"],"is_obsolete":false,"name":"regulation of cardiac myofibril assembly","synonyms":[{"name":"regulation of cardiac myofibril development","type":"exact"},{"name":"regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905304"}


id: PBO:0062921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 8","termid":"PBO:0062921"}


id: PBO:0109433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair protein","termid":"PBO:0109433"}


id: MOD:00955
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-histidine residue to release water and form tele- or pros-(2-amino-2-carboxyethyl)histidine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alaninohistidine (serine crosslinked to tele or pros nitrogen of histidine)","synonyms":[{"name":"beta-alaninohistidine","type":"exact"}],"termid":"MOD:00955"}


id: MONDO:0800392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the GNAT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"GNAT2-related retinopathy","termid":"MONDO:0800392","xrefs":{"Monarch":{"xref_id":"0800392"}}}


id: GO:0160220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + ATP + D-alanine = ADP + D-alanyl-(R)-lactate + phosphate.","definition_xrefs":["RHEA:37347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"D-alanine-(R)-lactate ligase activity","secondary_identifiers":["EC:6.1.2.1","KEGG_REACTION:R09588","MetaCyc:RXN-11298"],"synonyms":[{"name":"D-alanyl-D-lactate ligase activity","type":"exact"}],"termid":"GO:0160220"}


id: PBO:0073002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 3","termid":"PBO:0073002"}


id: MOD:00202
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-serine.","definition_xrefs":["PubMed:7973665","RESID:AA0195#SER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Ser)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser(Ser)","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Ser)","type":"exact"}],"termid":"MOD:00202"}


id: PBO:0077423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B","termid":"PBO:0077423"}


id: PBO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 10 pseudogene","termid":"PBO:0062079"}


id: GO:0009607
data:
  {"annotated_genes":["SJAG_04183","SJAG_04140","SJAG_03048","SJAG_04332","SJAG_01837","SJAG_00082","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101909,110783,116283,93283,89464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[103687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[101918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[101919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[94034,101920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to biotic stress","type":"narrow"}],"termid":"GO:0009607","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0034502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_telomere","termid":"PBO:0034502"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: PBO:0081802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 731, pseudogene","termid":"PBO:0081802"}


id: GO:1900262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-directed DNA polymerase activity (obsolete GO:1900262)","synonyms":[{"name":"regulation of DNA duplicase activity","type":"exact"},{"name":"regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of DNA polymerase I","type":"narrow"},{"name":"regulation of DNA polymerase II","type":"narrow"},{"name":"regulation of DNA polymerase III","type":"narrow"},{"name":"regulation of DNA polymerase V activity","type":"narrow"},{"name":"regulation of DNA polymerase alpha","type":"narrow"},{"name":"regulation of DNA polymerase beta","type":"narrow"},{"name":"regulation of DNA polymerase gamma","type":"narrow"},{"name":"regulation of DNA replicase activity","type":"exact"},{"name":"regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"regulation of Klenow fragment","type":"narrow"},{"name":"regulation of Taq DNA polymerase","type":"narrow"},{"name":"regulation of Taq Pol I","type":"narrow"},{"name":"regulation of Tca DNA polymerase","type":"narrow"},{"name":"regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"regulation of beta DNA polymerase activity","type":"narrow"},{"name":"regulation of delta DNA polymerase activity","type":"narrow"},{"name":"regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"regulation of duplicase","type":"broad"},{"name":"regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"regulation of eta DNA polymerase activity","type":"narrow"},{"name":"regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"regulation of iota DNA polymerase activity","type":"narrow"},{"name":"regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"regulation of mu DNA polymerase activity","type":"narrow"},{"name":"regulation of nu DNA polymerase activity","type":"narrow"},{"name":"regulation of sequenase","type":"related"},{"name":"regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"regulation of theta DNA polymerase activity","type":"narrow"},{"name":"regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900262"}


id: PBO:0051757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate multikinase pseudogene 1","termid":"PBO:0051757"}


id: PBO:0079377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 12","termid":"PBO:0079377"}


id: MONDO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically heterogenous inherited disorder characterized by abnormalities in the metabolism of lipids and proteins. Signs and symptoms usually appear early in life and vary from mild to life threatening. They include vomiting, dehydration, hypotonia, developmental delays, hepatomegaly, lethargy, intellectual disabilities, and chronic kidney disease.","definition_xrefs":["NCIT:C98986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn organic aciduria","termid":"MONDO:0000688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic acidemia","secondary_identifiers":["ICD10CM:E71.120","NANDO:2200491","SCTID:42393006","UMLS:C0268583","DOID:14749","GARD:7033","MESH:C537358","NANDO:1200793","OMIMPS:251000","MEDGEN:120654","ICD9:270.7"],"synonyms":[{"name":"METHYLMALONICACIDURIA due to methylmalonic CoA mutase deficiency","type":"narrow"},{"name":"METHYLMALONICACIDURIA, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin--Cbl A","type":"narrow"},{"name":"METHYLMALONICACIDURIA, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin--Cbl B","type":"narrow"},{"name":"methylmalonic acidemia, cblA type","type":"narrow"},{"name":"methylmalonic acidemia, cblB type","type":"narrow"},{"name":"methylmalonic aciduria","type":"exact"},{"name":"methylmalonic aciduria cblB type","type":"narrow"},{"name":"methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency","type":"narrow"},{"name":"methylmalonic aciduria mut type","type":"narrow"},{"name":"methylmalonic aciduria type cblA","type":"narrow"},{"name":"methylmalonic aciduria type cblB","type":"narrow"},{"name":"methylmalonic aciduria, mut type","type":"narrow"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblA type","type":"narrow"},{"name":"methylmalonic aciduria, vitamin B12-responsive, due to defect in synthesis of adenosylcobalamin, cblB type","type":"narrow"}],"termid":"MONDO:0002012","xrefs":{"Monarch":{"xref_id":"0002012"}}}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: PBO:0060756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4","termid":"PBO:0060756"}


id: GO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of the DNA-directed RNA polymerase II core complex from the cytoplasm into the nucleus.","definition_xrefs":["GOC:dos","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II complex import to nucleus (obsolete GO:0044376)","synonyms":[{"name":"DNA-directed RNA polymerase II core complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase II core complex localization to nucleus","type":"exact"},{"name":"RNA polymerase II complex import into nucleus","type":"exact"},{"name":"RNA polymerase II complex localisation to nucleus","type":"exact"}],"termid":"GO:0044376"}


id: GO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 2A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein phosphatase 2A binding","synonyms":[{"name":"protein phosphatase 2 binding","type":"related"}],"termid":"GO:0051721"}


id: PBO:0028813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_centromeric_heterochromatin","termid":"PBO:0028813"}


id: GO:0090282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["PMID:10747051","PMID:10899128","PMID:10894548","GOC:rn","PMID:10959837"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0090282)","synonyms":[{"name":"activation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"activation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter during G2/M-phase of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of G2/M-specific transcription in the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during G2/M transition of the mitotic cell cycle","type":"exact"},{"name":"up-regulation of transcription involved in G2/M transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0090282"}


id: PBO:0066067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RARA antisense RNA 1","termid":"PBO:0066067"}


id: MONDO:0032767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 6","secondary_identifiers":["MEDGEN:1681559","GARD:16354","OMIM:618464","UMLS:C5193112"],"synonyms":[{"name":"PARAGANGLIOMAS 6","type":"related"},{"name":"PGL6","type":"related"}],"termid":"MONDO:0032767","xrefs":{"Monarch":{"xref_id":"0032767"}}}


id: PBO:0049970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 16","termid":"PBO:0049970"}


id: PBO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi protein, Opi10 (predicted)","termid":"PBO:0015686"}


id: PBO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARS1 divergent transcript","termid":"PBO:0048387"}


id: GO:1902981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in mitotic DNA replication (obsolete GO:1902981)","synonyms":[{"name":"synthesis of RNA primer involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902981"}


id: PBO:0043295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 12 member B","termid":"PBO:0043295"}


id: MONDO:0009756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Niemann-Pick disease type A is a very severe subtype of Niemann-Pick disease, an autosomal recessive lysosomal disease, and is characterized clinically by onset in infancy or early childhood with failure to thrive, hepatosplenomegaly, and rapidly progressive neurodegenerative disorders.","definition_xrefs":["Orphanet:77292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"acid sphingomyelinase deficiency","termid":"MONDO:0100464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002561","MONDO:0002525","MONDO:0005046","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"Niemann-Pick disease type A","secondary_identifiers":["DOID:0070111","GARD:7206","NCIT:C126561","NANDO:1200061","NANDO:2201206","MESH:D052536","OMIM:257200","icd11.foundation:530611243","SCTID:52165006","MEDGEN:78650","UMLS:C0268242"],"synonyms":[{"name":"Niemann-PICK disease, type A","type":"related"},{"name":"Niemann-Pick disease, Intermediate, protracted neurovisceral","type":"related"},{"name":"sphingomyelin lipidosis","type":"related"},{"name":"sphingomyelinase deficiency","type":"related"}],"termid":"MONDO:0009756","xrefs":{"Monarch":{"xref_id":"0009756"}}}


id: FYPO:0002148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of abnormal morphology (i.e. size, shape, or structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, abnormal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, abnormal morphology","type":"exact"}],"termid":"FYPO:0002148"}


id: PBO:0059273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 2","termid":"PBO:0059273"}


id: PBO:0003778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R39b (predicted)","termid":"PBO:0003778"}


id: PBO:0076742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 family, X-linked 2","termid":"PBO:0076742"}


id: GO:0120258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine to form peptidyl-O-acetyl-L-threonine.","definition_xrefs":["RESID:AA0423","PMID:16728640","PMID:22802624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"},{"relation_name":"is_a","term_name":"peptidyl-threonine acetylation","termid":"GO:0120257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine O-acetylation","secondary_identifiers":["RESID:AA0364"],"termid":"GO:0120258"}


id: MONDO:0010269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coats disease (CD) is an idiopathic disorder characterized by retinal telangiectasia with deposition of intraretinal or subretinal exudates, potentially leading to retinal detachment and unilateral blindness. CD is classically an isolated and unilateral condition affecting otherwise healthy young children.","definition_xrefs":["Orphanet:190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal telangiectasia","termid":"MONDO:0004348"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Coats disease","secondary_identifiers":["MedDRA:10015901","MESH:D058456","OMIM:300216","UMLS:C0154832","icd11.foundation:2032707885","SCTID:360455002","GARD:6121","ICD9:362.12","DOID:7765","MEDGEN:102319","NORD:981"],"synonyms":[{"name":"Coats disease","type":"exact"},{"name":"Coats' disease","type":"exact"},{"name":"Coats' syndrome","type":"exact"},{"name":"Leber miliary aneurysm","type":"exact"},{"name":"congenital retinal telangiectasia","type":"exact"},{"name":"exudative retinopathy","type":"exact"},{"name":"retinal telangiectasis","type":"related"}],"termid":"MONDO:0010269","xrefs":{"Monarch":{"xref_id":"0010269"}}}


id: PBO:0040229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 1","termid":"PBO:0040229"}


id: PBO:0042364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule","termid":"PBO:0042364"}


id: GO:1904994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"}


id: PBO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase Leu3","termid":"PBO:0004159"}


id: MONDO:0014159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spectrin-associated autosomal recessive cerebellar ataxia is a rare, genetic neurological disease, due to SPTBN2 mutations, characterized by global development delay in infancy, followed by childhood-onset gait ataxia with limb dysmetria and dysdiadochokinesia, mild to severe intellectual disability, development of cerebellar atrophy, and abnormal eye movements (including a convergent squint, hypometric saccades, jerky pursuit movements and incomplete range of movement).","definition_xrefs":["Orphanet:352403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 14","secondary_identifiers":["SCTID:763351003","MEDGEN:1636182","DOID:0080058","UMLS:C4706415","OMIM:615386","GARD:17516"],"synonyms":[{"name":"Ataxie spinocérébelleuse à début infantile avec retard psychomoteur","type":"exact"},{"name":"SCAR14","type":"exact"},{"name":"SPARCA","type":"exact"},{"name":"SPARCA1","type":"exact"},{"name":"SPTBN2 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in SPTBN2","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-cognitive defect syndrome","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 14","type":"exact"},{"name":"cerebellar ataxia, autosomal recessive, spectrin-associated, 1","type":"related"},{"name":"infantile-onset spinocerebellar ataxia-psychomotor delay syndrome","type":"exact"},{"name":"spectrin-associated autosomal recessive cerebellar ataxia","type":"related"},{"name":"spectrin-associated autosomal recessive cerebellar ataxia type 1","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 14","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 14","type":"exact"}],"termid":"MONDO:0014159","xrefs":{"Monarch":{"xref_id":"0014159"}}}


id: MONDO:1010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, non-human animal","secondary_identifiers":["OMIA:000337"],"termid":"MONDO:1010323","xrefs":{"Monarch":{"xref_id":"1010323"}}}


id: GO:0046202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"cyanide metabolic process","termid":"GO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide biosynthetic process","synonyms":[{"name":"cyanide anabolism","type":"exact"},{"name":"cyanide biosynthesis","type":"exact"},{"name":"cyanide formation","type":"exact"},{"name":"cyanide synthesis","type":"exact"}],"termid":"GO:0046202"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: FYPO:0002963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is abnormal. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:23980030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to nuclear exosome focus","synonyms":[{"name":"abnormal protein localisation to nuclear exosome focus","type":"exact"},{"name":"abnormal protein localization to MMi1 focus","type":"exact"},{"name":"abnormal protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"abnormal protein localization to nuclear exosome foci","type":"exact"},{"name":"abnormal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002963"}


id: GO:0102764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-deoxotyphasterol + O2 + a reduced electron acceptor = 6-deoxocastasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-deoxotyphasterol C-23 hydroxylase activity (obsolete GO:0102764)","termid":"GO:0102764"}


id: PBO:0109652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3116","termid":"PBO:0109652"}


id: MONDO:0030912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 47","secondary_identifiers":["OMIM:617635","GARD:17935","Orphanet:502434","UMLS:C4539951","DOID:0080238","MEDGEN:1622196"],"synonyms":[{"name":"MRD47","type":"related"},{"name":"STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 47","type":"related"},{"name":"autosomal dominant mental retardation 47","type":"related"},{"name":"intellectual disability, autosomal dominant 47","type":"exact"},{"name":"mental retardation, autosomal dominant 47","type":"related"}],"termid":"MONDO:0030912","xrefs":{"Monarch":{"xref_id":"0030912"}}}


id: MONDO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 5p13.1.","definition_xrefs":["PMID:17447842","DOID:0110888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 18","secondary_identifiers":["MEDGEN:393655","UMLS:C2677090","MESH:C567377","OMIM:612262"],"synonyms":[{"name":"IBD18","type":"exact"},{"name":"inflammatory bowel disease 18","type":"exact"},{"name":"inflammatory bowel disease type 18","type":"exact"}],"termid":"MONDO:0012841","xrefs":{"Monarch":{"xref_id":"0012841"}}}


id: MONDO:0013660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, Perthes disease, and upward gaze palsy","secondary_identifiers":["OMIM:614262","UMLS:C3280309","MEDGEN:481939"],"synonyms":[{"name":"APUG","type":"related"},{"name":"arthrogryposis, Perthes disease, and upward gaze palsy","type":"exact"}],"termid":"MONDO:0013660","xrefs":{"Monarch":{"xref_id":"0013660"}}}


id: GO:0015621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric triacetylfusarinine C from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}


id: GO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small version of the zonula adherens type junction, characterized by a symmetrical adherent point between two cells.","definition_xrefs":["NIF_Subcellular:sao257629430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zonula adherens","termid":"GO:0005915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"puncta adhaerentia","termid":"GO:0044288"}


id: PBO:0077899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase alpha/beta 1","termid":"PBO:0077899"}


id: MONDO:0012325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nguyen syndrome","secondary_identifiers":["MEDGEN:400620","MESH:C536115","UMLS:C1864823","OMIM:609643"],"synonyms":[{"name":"MCA/MR syndrome with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"MCA/Mr with hypocholesterolemia due to familial hypobetalipoproteinemia","type":"related"},{"name":"Nguyen syndrome","type":"exact"}],"termid":"MONDO:0012325","xrefs":{"Monarch":{"xref_id":"0012325"}}}


id: PBO:0090768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III assembly protein Cbp6","termid":"PBO:0090768"}


id: GO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sugar/polyol channel activity (obsolete GO:0015253)","synonyms":[{"name":"sugar/polyol channel activity","type":"exact"}],"termid":"GO:0015253"}


id: PBO:0049031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 18","termid":"PBO:0049031"}


id: MONDO:0015801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease due to alpha-1-antitrypsin Pittsburgh mutation","secondary_identifiers":["UMLS:C5190706","GARD:20148","icd11.foundation:59972355","MEDGEN:1675899","Orphanet:178396"],"termid":"MONDO:0015801","xrefs":{"Monarch":{"xref_id":"0015801"}}}


id: PATO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting movement in a circular course.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling","termid":"PATO:0001911"}


id: FYPO:0006318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is lower than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA resection during replication fork processing","synonyms":[{"name":"decreased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"decreased DNA resectioning during replication fork processing","type":"exact"},{"name":"decreased extent of DNA resection during replication fork processing","type":"exact"},{"name":"decreased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"},{"name":"reduced DNA resection during replication fork processing","type":"exact"}],"termid":"FYPO:0006318"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:21246752","PMID:22786806","PMID:19959363","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0056052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 2, pre-mRNA splicing factor","termid":"PBO:0056052"}


id: GO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Subunit of a heterotrimeric G-protein GTPase; associates tightly with the gamma subunit.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein GTPase, beta-subunit (obsolete GO:0000264)","synonyms":[{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"exact"}],"termid":"GO:0000264"}


id: MONDO:0010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosinosis","secondary_identifiers":["OMIM:276800","SCTID:57414003","UMLS:C0268484","ICD9:270.2","MEDGEN:78683","MESH:C562659"],"synonyms":[{"name":"Tyrosinosis","type":"exact"}],"termid":"MONDO:0010163","xrefs":{"Monarch":{"xref_id":"0010163"}}}


id: PBO:0027644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alpha-galactosidase_activity","termid":"PBO:0027644"}


id: PBO:0044579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 1","termid":"PBO:0044579"}


id: PBO:0073531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 2, endophilin A1","termid":"PBO:0073531"}


id: MONDO:0859342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 30, primary, autosomal recessive","secondary_identifiers":["UMLS:C5774280","OMIM:620183","MEDGEN:1824053"],"termid":"MONDO:0859342","xrefs":{"Monarch":{"xref_id":"0859342"}}}


id: MONDO:0018321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical juvenile parkinsonism (AJP) is a complex form of young-onset Parkinson disease (YOPD) that manifests with pyramidal signs, eye movement abnormalities, psychiatric manifestations (depression, anxiety, drug-induced psychosis, and impulse control disorders), intellectual disability, and other neurological symptoms (such as ataxia and epilepsy) along with classical parkinsonian symptoms.","definition_xrefs":["Orphanet:391411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical juvenile parkinsonism","secondary_identifiers":["SCTID:725146001","UMLS:C4510873","GARD:17621","MEDGEN:1380105"],"termid":"MONDO:0018321","xrefs":{"Monarch":{"xref_id":"0018321"}}}


id: GO:0044830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of viral RNA genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"regulates","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral RNA genome replication","synonyms":[{"name":"regulation by host of viral RNA genome replication","type":"exact"}],"termid":"GO:0044830"}


id: MONDO:0009799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pachydermoperiostosis (obsolete MONDO:0009799)","secondary_identifiers":["NANDO:1200642","NANDO:2100288","NANDO:2201004"],"termid":"MONDO:0009799","xrefs":{"Monarch":{"xref_id":"0009799"}}}


id: PBO:0090587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family TORC1 signalling protein Tap42","termid":"PBO:0090587"}


id: PR:O43021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC354.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C354.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.07c","synonyms":[{"name":"Spom972h-SPBC354.07c","type":"exact"}],"termid":"PR:O43021"}


id: GO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"activation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"positive regulation of immune response-dependent tolerance induction","type":"exact"},{"name":"stimulation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"up regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"up-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"upregulation of tolerance induction dependent upon immune response","type":"exact"}],"termid":"GO:0002654"}


id: GO:0141102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethylaminomethyluridine34 in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine34 in tRNA(Leu) + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43088","PMID:20855540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016741","GO:0016740","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA (5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase activity","synonyms":[{"name":"tRNA (cytidine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase activity","type":"exact"}],"termid":"GO:0141102"}


id: PBO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF ubiquitin ligase complex subunit Skp1","termid":"PBO:0003495"}


id: PATO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased functionality","secondary_identifiers":["PATO:0001641","PATO:0001642","PATO:0001556","PATO:0001568"],"synonyms":[{"name":"dysfunction","type":"broad"},{"name":"dysfunctional","type":"broad"},{"name":"having decreased function","type":"exact"},{"name":"impaired","type":"related"},{"name":"lacks function of type","type":"exact"},{"name":"low functionality","type":"exact"},{"name":"partial functionality","type":"exact"}],"termid":"PATO:0001624"}


id: PBO:0069417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 679, pseudogene","termid":"PBO:0069417"}


id: MONDO:0975752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign vascular tumor","termid":"MONDO:0971115"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"littoral cell hemangioma of the spleen","secondary_identifiers":["Orphanet:673538"],"termid":"MONDO:0975752","xrefs":{"Monarch":{"xref_id":"0975752"}}}


id: MONDO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with orofaciodigital defect (or oral-facial-digital syndrome type 6, OFD6) is a very rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with orofacial anomalies and often polydactyly.","definition_xrefs":["Orphanet:2754"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Joubert syndrome 17","termid":"MONDO:0013824"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"orofaciodigital syndrome type 6","secondary_identifiers":["SCTID:721873007","MESH:C536531","OMIM:277170","MEDGEN:411200","DOID:0060376","UMLS:C2745997","GARD:4412","NCIT:C124841"],"synonyms":[{"name":"Joubert syndrome with oral-facial-digital syndrome","type":"exact"},{"name":"Joubert syndrome with orofaciodigital defect","type":"exact"},{"name":"OFD6","type":"exact"},{"name":"Ofds 6","type":"related"},{"name":"Varadi syndrome","type":"exact"},{"name":"Varadi-Papp syndrome","type":"exact"},{"name":"Váradi syndrome","type":"related"},{"name":"Váradi-Papp syndrome","type":"related"},{"name":"oral-Facial-digital syndrome, type 6","type":"related"},{"name":"oral-facial-digital syndrome type 6","type":"exact"},{"name":"orofaciodigital syndrome 6","type":"related"},{"name":"orofaciodigital syndrome VI","type":"exact"},{"name":"orofaciodigital syndrome type 6","type":"exact"},{"name":"polydactyly - cleft lip/palate - psychomotor retardation","type":"related"},{"name":"polydactyly cleft lip palate psychomotor retardation","type":"related"},{"name":"polydactyly, cleft Lip/palate or lingual lump, and psychomotor retardation","type":"related"},{"name":"polydactyly-cleft lip/palate-psychomotor retardation syndrome","type":"exact"}],"termid":"MONDO:0010176","xrefs":{"Monarch":{"xref_id":"0010176"}}}


id: GO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Folate derivative (out) + anion (in) = folate derivative (in) + anion (out). The Reduced Folate Carrier (RCF(SLC19A1) acts by an antiport mechanism. RCF carries several folate derivatives: MTX, PMX, ratitrexed, pralatrexate, 5-methyl THF, and 5-formyl THF.","definition_xrefs":["GOC:mtg_transport","PMID:21568705","PMID:24745983","TC:2.A.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"folate:monoatomic anion antiporter activity","synonyms":[{"name":"folate:anion antiporter activity","type":"broad"},{"name":"reduced folate carrier activity","type":"related"},{"name":"reduced folate transmembrane transporter activity","type":"related"},{"name":"reduced folate transporter","type":"related"}],"termid":"GO:0008518"}


id: GO:1901699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen compound","synonyms":[{"name":"cellular response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901699"}


id: MONDO:0045010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of glycoprotein metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glycoprotein metabolism disease","secondary_identifiers":["MEDGEN:575248","UMLS:C0342844","SCTID:238045003"],"synonyms":[{"name":"disorder of glycoprotein metabolic process","type":"exact"},{"name":"disorder of glycoprotein metabolism","type":"exact"},{"name":"glycoprotein metabolic process disease","type":"exact"},{"name":"glycoprotein metabolism disease","type":"exact"}],"termid":"MONDO:0045010","xrefs":{"Monarch":{"xref_id":"0045010"}}}


id: MONDO:0005331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrocephalosyndactylia (obsolete MONDO:0005331)","termid":"MONDO:0005331","xrefs":{"Monarch":{"xref_id":"0005331"}}}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: MONDO:0010273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkins lymphoma","termid":"MONDO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoma, Hodgkin, X-linked pseudoautosomal","secondary_identifiers":["OMIM:300221","MEDGEN:335352","MESH:C538326","UMLS:C1846167"],"synonyms":[{"name":"Hodgkin disease susceptibility, pseudoautosomal","type":"exact"},{"name":"Hodgkin disease, X-linked Pseudoautosomal","type":"related"},{"name":"lymphoma, Hodgkin, X-linked pseudoautosomal","type":"exact"}],"termid":"MONDO:0010273","xrefs":{"Monarch":{"xref_id":"0010273"}}}


id: MONDO:0021112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the scrotum.","definition_xrefs":["NCIT:C3560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scrotum cancer","secondary_identifiers":["MEDGEN:57564","SCTID:363454002","ICD9:187.7","UMLS:C0153604"],"synonyms":[{"name":"cancer of scrotum","type":"exact"},{"name":"malignant neoplasm of scrotum","type":"exact"},{"name":"malignant neoplasm of the scrotum","type":"exact"},{"name":"malignant scrotal neoplasm","type":"exact"},{"name":"malignant scrotal tumor","type":"exact"},{"name":"malignant scrotal tumour","type":"exact"},{"name":"malignant scrotum neoplasm","type":"exact"},{"name":"malignant tumor of scrotum","type":"exact"},{"name":"malignant tumor of the scrotum","type":"exact"},{"name":"malignant tumour of scrotum","type":"exact"},{"name":"malignant tumour of the scrotum","type":"exact"},{"name":"scrotum cancer","type":"exact"}],"termid":"MONDO:0021112","xrefs":{"Monarch":{"xref_id":"0021112"}}}


id: PBO:0076122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STXBP5 antisense RNA 1","termid":"PBO:0076122"}


id: GO:0102396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-cis-10'-apo-beta-carotenal + 2 O2 = carlactone + (2E,4E,6E)-7-hydroxy-4-methylhepta-2,4,6-trienal.","definition_xrefs":["GOC:pz","EC:1.13.11.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"9-cis-10'-apo-beta-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:34403","MetaCyc:RXN-13643"],"termid":"GO:0102396"}


id: MONDO:0012744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1Y","secondary_identifiers":["DOID:0110457","MESH:C567507","GARD:15530","OMIM:611878","MEDGEN:437215","UMLS:C2678476"],"synonyms":[{"name":"CMD1Y","type":"exact"},{"name":"TPM1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Y","type":"related"},{"name":"cardiomyopathy, dilated, type 1Y","type":"exact"},{"name":"dilated cardiomyopathy type 1Y","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TPM1","type":"exact"},{"name":"left ventricular noncompaction 9","type":"related"}],"termid":"MONDO:0012744","xrefs":{"Monarch":{"xref_id":"0012744"}}}


id: PBO:0034219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mesoparasite_of","termid":"PBO:0034219"}


id: PBO:0089124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd6","termid":"PBO:0089124"}


id: GO:0015352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of sterol from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete secondary active sterol transmembrane transporter activity (obsolete GO:0015352)","synonyms":[{"name":"sterol porter activity","type":"related"}],"termid":"GO:0015352"}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: PBO:0047398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 36 pseudogene 1","termid":"PBO:0047398"}


id: PBO:0081519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 428","termid":"PBO:0081519"}


id: PBO:0075879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 antisense RNA 1 (head to head)","termid":"PBO:0075879"}


id: PBO:0068982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 226, pseudogene","termid":"PBO:0068982"}


id: GO:0008023
data:
  {"annotated_genes":["SJAG_00483","SJAG_03211","SJAG_02416","SJAG_03481","SJAG_02393","SJAG_00540","SJAG_01610","SJAG_02238","SJAG_01149","SJAG_04353","SJAG_03118","SJAG_01151","SJAG_03061","SJAG_02097","SJAG_04933","SJAG_03128","SJAG_03967","SJAG_01213","SJAG_00139","SJAG_04670","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76573,80431],"is_not":false,"summary":null,"term":"GO:0008023"},{"annotations":[78031,80420,68486,72848,74285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016593"},{"annotations":[81262,95293,110489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[74057,74715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032044"},{"annotations":[64637,78171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070449"},{"annotations":[73178,79249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035101"},{"annotations":[108442,108599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[60367,99448,112774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032783"}]},"cv_name":"cellular_component","definition":"Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01610":null,"SJAG_02057":null,"SJAG_02097":null,"SJAG_02238":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03967":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"transcription elongation factor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008023","terms_by_termid":{"GO:0008023":null,"GO:0016593":null,"GO:0032044":null,"GO:0032783":null,"GO:0035101":null,"GO:0070449":null,"GO:0070691":null,"GO:0070692":null}}


id: GO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the fungiform papilla are generated and organized. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"fungiform papilla development","termid":"GO:0061196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla morphogenesis","termid":"GO:0061197"}


id: MONDO:0011441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complex regional pain syndrome type 1 (CRPS1) is a form of complex regional pain syndrome in which the pain is disproportionate to any known inciting event and is characterized by continuous pain, allodynia, or hyperalgesia as well as edema, coloration (changes in skin blood flow), or abnormal sudomotor activity in the region of pain. Onset of CRPS1 symptoms may occur within a few days to a month after an injury or trauma to the affected limb.","definition_xrefs":["Orphanet:99995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"complex regional pain syndrome","termid":"MONDO:0019369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex regional pain syndrome type 1","secondary_identifiers":["ICD9:337.20","MEDGEN:11159","NCIT:C85042","DOID:1811","OMIM:604335","ICD9:337.2","MESH:D012019","MedDRA:10064334","GARD:16928","ICD10CM:M89.0","ICD9:337.29","ICD9:733.7","UMLS:C0034931","SCTID:50642008","MedDRA:10038249","EFO:1001147","ICD9:337.21"],"synonyms":[{"name":"Algodystrophy","type":"exact"},{"name":"CRPS I","type":"exact"},{"name":"CRPS1","type":"exact"},{"name":"Complex regional pain syndrome I","type":"exact"},{"name":"RND","type":"exact"},{"name":"RSDS","type":"exact"},{"name":"complex regional pain syndrome type 1","type":"exact"},{"name":"reflex neurovascular dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy","type":"exact"},{"name":"reflex sympathetic dystrophy syndrome","type":"exact"}],"termid":"MONDO:0011441","xrefs":{"Monarch":{"xref_id":"0011441"}}}


id: GO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gallbladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation.","definition_xrefs":["FMA:66070","GOC:sr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric nervous system development","termid":"GO:0048484"}


id: MONDO:0012099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AICA-ribosiduria is an extremely severe inborn error of purine biosynthesis characterized clinically in the single reported case to date by profound intellectual deficit, epilepsy, dysmorphic features of the knees, elbows, and shoulders and congenital blindness.","definition_xrefs":["Orphanet:250977"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0002320","MONDO:0019254"],"is_obsolete":false,"name":"AICA-ribosiduria","secondary_identifiers":["MESH:C563876","OMIM:608688","UMLS:C1837530","GARD:13781","MEDGEN:332474","SCTID:725289009"],"synonyms":[{"name":"5-amino-4-imidazole carboxamide ribosiduria","type":"exact"},{"name":"AICA-ribosiduria due to ATIC deficiency","type":"exact"},{"name":"AICAR transformylase/IMP cyclohydrolase deficiency","type":"related"},{"name":"ATIC deficiency","type":"exact"},{"name":"Aica-Ribosuria due to Atic deficiency","type":"related"},{"name":"Atic deficiency","type":"related"}],"termid":"MONDO:0012099","xrefs":{"Monarch":{"xref_id":"0012099"}}}


id: GO:1900190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation","termid":"GO:1900190"}


id: GO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"negatively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage antigen processing and presentation","synonyms":[{"name":"down regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"down-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"downregulation of macrophage antigen processing and presentation","type":"exact"},{"name":"inhibition of macrophage antigen processing and presentation","type":"narrow"}],"termid":"GO:0002617"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: MONDO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the LMF1 gene resulting in combined lipase deficiency with concomitant hypertriglyceridemia and associated disorders.","definition_xrefs":["NCIT:C126558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"lipase deficiency, combined","secondary_identifiers":["GARD:10244","DOID:0111422","OMIM:246650","Orphanet:535453","MEDGEN:340886","UMLS:C1855498","MESH:C535904"],"synonyms":[{"name":"LPL and HL deficiency","type":"related"},{"name":"LPL and HTGL deficiency","type":"related"},{"name":"combined lipase deficiency","type":"exact"},{"name":"familial lipase maturation factor 1 deficiency","type":"exact"},{"name":"lipase deficiency combined","type":"related"},{"name":"lipase deficiency, combined","type":"exact"},{"name":"lipoprotein lipase deficiency with hepatic triglyceride lipase deficiency","type":"related"}],"termid":"MONDO:0009527","xrefs":{"Monarch":{"xref_id":"0009527"}}}


id: GO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete minor histocompatibility antigen (obsolete GO:0005558)","synonyms":[{"name":"minor histocompatibility antigen","type":"exact"}],"termid":"GO:0005558"}


id: GO:0004738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the oxidative decarboxylation of pyruvate.","definition_xrefs":["ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase activity (obsolete GO:0004738)","termid":"GO:0004738"}


id: PBO:0089603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck1","termid":"PBO:0089603"}


id: GO:0008733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose = L-ribulose.","definition_xrefs":["EC:5.3.1.4","RHEA:14821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-arabinose isomerase activity","secondary_identifiers":["KEGG_REACTION:R01761","MetaCyc:ARABISOM-RXN"],"synonyms":[{"name":"L-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"L-arabinose ketol-isomerase activity","type":"related"}],"termid":"GO:0008733"}


id: GO:0010200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chitin","termid":"GO:0010200"}


id: PBO:0113289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; important for disaggregation of ordered and disordered protein aggregates; forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA; suppresses frameshifting at stalled ribosomes","termid":"PBO:0113289"}


id: MONDO:0100122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive mucolipidosis disorder caused by bi-allelic variants in the GNPTAB gene. Symptoms of this condition occur across a clinical spectrum including mucolipidosis type II (ML II) and mucolipidosis type III alpha/beta (ML IIIα/β), and phenotypes intermediate between ML II and ML IIIα/β.","definition_xrefs":["PMID:20301728","PMID:32651481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucolipidosis","termid":"MONDO:0019248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"GNPTAB-mucolipidosis","synonyms":[{"name":"GNPTAB-related disorder","type":"exact"},{"name":"UDP-N-acetylglucosamine-1-phosphotransferase subunit alpha/beta deficiency","type":"exact"}],"termid":"MONDO:0100122","xrefs":{"Monarch":{"xref_id":"0100122"}}}


id: PBO:0059222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 4, pseudogene","termid":"PBO:0059222"}


id: MONDO:1010570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, pig","secondary_identifiers":["OMIA:000278-9823"],"termid":"MONDO:1010570","xrefs":{"Monarch":{"xref_id":"1010570"}}}


id: PomGeneEx:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA absent","synonyms":[{"name":"RNA expression absent","type":"exact"}],"termid":"PomGeneEx:0000015"}


id: MONDO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare gynecologic or obstetric disease (obsolete MONDO:0019937)","secondary_identifiers":["Orphanet:96344"],"termid":"MONDO:0019937","xrefs":{"Monarch":{"xref_id":"0019937"}}}


id: GO:0060236
data:
  {"annotated_genes":["SJAG_02332","SJAG_04464","SJAG_00244","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89337],"is_not":false,"summary":null,"term":"GO:0060236"},{"annotations":[111018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[114651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"regulates","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of mitotic spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380320"],"synonyms":[{"name":"regulation of mitotic spindle organisation","type":"exact"},{"name":"regulation of mitotic spindle organization and biogenesis","type":"related"}],"termid":"GO:0060236","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PBO:0053046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4B divergent transcript","termid":"PBO:0053046"}


id: PR:Q9USJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-mercaptopyruvate sulfurtransferase SseA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-mercaptopyruvate sulfurtransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.01","secondary_identifiers":["UniProtKB:Q9USJ1"],"synonyms":[{"name":"MST (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC4B3.01","type":"related"},{"name":"Spom972h-sseA","type":"exact"}],"termid":"PR:Q9USJ1"}


id: GO:0035685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a helper T cell between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["CL:0000912","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diapedesis","termid":"GO:0050904"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"},{"relation_name":"part_of","term_name":"helper T cell extravasation","termid":"GO:0035684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell diapedesis","synonyms":[{"name":"T-helper cell diapedesis","type":"exact"},{"name":"helper T-cell diapedesis","type":"exact"}],"termid":"GO:0035685"}


id: MONDO:8000000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection of the intervertebral disk space.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral joint disorder","termid":"MONDO:0037847"},{"relation_name":"is_a","term_name":"infective arthritis","termid":"MONDO:0042485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious discitis","secondary_identifiers":["EFO:1000900"],"termid":"MONDO:8000000","xrefs":{"Monarch":{"xref_id":"8000000"}}}


id: SO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a T-cell receptor gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_pseudogene","termid":"SO:0002097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}


id: GO:0120309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the lateral attachment of the cilium to the cell body via the flagellar attachment zone in some trypanosomatid species.","definition_xrefs":["PMID:11877446","PMID:18820079","PMID:22623724","PMID:26272611","GOC:krc","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium attachment to cell body","synonyms":[{"name":"cilial attachment to cell body","type":"exact"},{"name":"ciliary attachment to cell body","type":"exact"},{"name":"flagellar attachment to cell body","type":"exact"},{"name":"flagellum attachment to cell body","type":"exact"}],"termid":"GO:0120309"}


id: GO:0030019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa, but with more restricted specificity than trypsin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptase activity (obsolete GO:0030019)","synonyms":[{"name":"lung tryptase activity","type":"narrow"},{"name":"mast cell neutral proteinase activity","type":"related"},{"name":"mast cell protease II activity","type":"narrow"},{"name":"mast cell proteinase II","type":"related"},{"name":"mast cell serine proteinase II","type":"related"},{"name":"mast cell serine proteinase tryptase activity","type":"related"},{"name":"mast cell tryptase activity","type":"narrow"},{"name":"pituitary tryptase activity","type":"narrow"},{"name":"rat mast cell protease II","type":"related"},{"name":"skin tryptase activity","type":"narrow"},{"name":"tryptase M","type":"related"},{"name":"tryptase activity","type":"exact"}],"termid":"GO:0030019"}


id: PBO:0029899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_periphery","termid":"PBO:0029899"}


id: PBO:0073069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein 2","termid":"PBO:0073069"}


id: PBO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 2","termid":"PBO:0042543"}


id: PBO:0070095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 9 pseudogene","termid":"PBO:0070095"}


id: PBO:0064116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 3","termid":"PBO:0064116"}


id: PBO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrichrome synthetase Sib1","termid":"PBO:0000629"}


id: PBO:0083330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs TOP3/YLR234W and YLR236C","termid":"PBO:0083330"}


id: MONDO:0023809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Milner-Khallouf-Gibson syndrome","secondary_identifiers":["MEDGEN:419429","MESH:C537473","UMLS:C2931503"],"synonyms":[{"name":"Milner Khallouf Gibson syndrome","type":"related"},{"name":"microcephaly, short stature, slow growth, beak nose, micrognathia, skin dyspigmentation and forearm and thumb dysplasia","type":"related"}],"termid":"MONDO:0023809","xrefs":{"Monarch":{"xref_id":"0023809"}}}


id: MONDO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any of the several infectious disorders caused by members of streptococcus, a genus of gram positive bacteria belonging to the family Streptococcaceae. Streptococcal infections are classified into Groups A, B, C, D and G.","definition_xrefs":["NCIT:C87062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal infection","secondary_identifiers":["SCTID:85769006","ICD9:041.09","UMLS:C0038395","ICD9:041.00","MESH:D013290","MEDGEN:20963","EFO:1001476"],"synonyms":[{"name":"Streptococcus caused disease or disorder","type":"exact"},{"name":"Streptococcus disease or disorder","type":"exact"},{"name":"Streptococcus infectious disease","type":"exact"},{"name":"infection, streptococcal","type":"related"},{"name":"infections, streptococcal","type":"related"},{"name":"streptococcal infection","type":"exact"}],"termid":"MONDO:0021680","xrefs":{"Monarch":{"xref_id":"0021680"}}}


id: GO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the dorsal/ventral pattern of the neural tube.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"dorsal/ventral neural tube patterning","termid":"GO:0021904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:0060831"}


id: PBO:0066138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor 1","termid":"PBO:0066138"}


id: MONDO:0957337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated chorioretinal dystrophy","secondary_identifiers":["UMLS:C5681368","GARD:22096","Orphanet:519300","MEDGEN:1842795"],"termid":"MONDO:0957337","xrefs":{"Monarch":{"xref_id":"0957337"}}}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: MONDO:1011347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-Covid-19 disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-viral disorder, non-human animal","termid":"MONDO:1011349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-COVID-19 disorder, non-human animal","termid":"MONDO:1011347","xrefs":{"Monarch":{"xref_id":"1011347"}}}


id: MONDO:0008993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate - stapes fixation - oligodontia is characterized by cleft soft palate, severe oligodontia of the deciduous teeth, absence of the permanent dentition, bilateral conductive deafness due to fixation of the footplate of the stapes, short halluces with a wide space between the first and second toes, and fusion of carpal and tarsal bones. It has been described in two sisters of Swedish extraction. An autosomal recessive mode of inheritance is likely. There have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate-stapes fixation-oligodontia syndrome","secondary_identifiers":["MEDGEN:347795","OMIM:216300","MESH:C565844","UMLS:C1859081","GARD:1393"],"synonyms":[{"name":"cleft palate stapes fixation oligodontia","type":"related"},{"name":"cleft palate, deafness, and oligodontia","type":"related"}],"termid":"MONDO:0008993","xrefs":{"Monarch":{"xref_id":"0008993"}}}


id: PBO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-J-shaped_vegetative_cell","termid":"PBO:0036016"}


id: MONDO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Stocco dos Santos type","secondary_identifiers":["MEDGEN:335202","GARD:1133","Orphanet:85288","UMLS:C1845530","OMIM:300434","MESH:C537495","SCTID:718910006","DOID:0112126"],"synonyms":[{"name":"SDSX","type":"related"},{"name":"Sdsx","type":"related"},{"name":"Stocco DOS Santos X-linked intellectual disability syndrome","type":"related"},{"name":"Stocco DOS Santos X-linked mental retardation syndrome","type":"related"},{"name":"Stocco dos Santos syndrome","type":"related"},{"name":"intellectual developmental disorder, X-linked syndromic, Stocco dos Santos type","type":"exact"},{"name":"intellectual disability, Stocco dos Santos type","type":"related"},{"name":"intellectual disability, X-linked, Stocco Dos Santos type","type":"related"},{"name":"mental retardation, Stocco dos Santos type","type":"related"},{"name":"mental retardation, X-linked, Stocco Dos Santos type","type":"related"}],"termid":"MONDO:0010325","xrefs":{"Monarch":{"xref_id":"0010325"}}}


id: PBO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 1","termid":"PBO:0060652"}


id: MOD:00411
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label. OBSOLETE because Unimod:18 is now merged with entry 258 remap to MOD:00581 'single 018 label'","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00411 O18 label (obsolete MOD:00411)","termid":"MOD:00411"}


id: PBO:0083368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps uncharacterized ORF YDL086W; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083368"}


id: GO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of gastrointestinal epithelium","termid":"GO:0030277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial structure maintenance","synonyms":[{"name":"epithelial structure maintenance of intestine","type":"exact"},{"name":"maintenance of intestinal epithelium","type":"exact"}],"termid":"GO:0060729"}


id: SO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a 21 nucleotide double stranded, polyadenylated non coding RNA, transcribed from the TAS gene.","definition_xrefs":["PMID:16145017"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tasiRNA_primary_transcript","termid":"SO:0001801"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tasiRNA","synonyms":[{"name":"trans acting small interfering RNA","type":"related"}],"termid":"SO:0001800"}


id: GO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin metabolic process","secondary_identifiers":["MetaCyc:PWY1F-823"],"synonyms":[{"name":"leucoanthocyanidin metabolism","type":"exact"}],"termid":"GO:0051556"}


id: GO:1901036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"positive regulation of glutamine transport","termid":"GO:2000487"},{"relation_name":"positively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"activation of L-glutamine import","type":"narrow"},{"name":"activation of L-glutamine uptake","type":"exact"},{"name":"positive regulation of L-glutamine import","type":"broad"},{"name":"positive regulation of L-glutamine uptake","type":"exact"},{"name":"up regulation of L-glutamine import","type":"exact"},{"name":"up regulation of L-glutamine uptake","type":"exact"},{"name":"up-regulation of L-glutamine import","type":"exact"},{"name":"up-regulation of L-glutamine uptake","type":"exact"},{"name":"upregulation of L-glutamine import","type":"exact"},{"name":"upregulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901036"}


id: PBO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3 (predicted)","termid":"PBO:0018124"}


id: GO:0051336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrolase activity","synonyms":[{"name":"hydrolase regulator","type":"exact"}],"termid":"GO:0051336"}


id: GO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The DNA-dependent DNA replication, exemplified by prokaryotes, that occurs as part of the cell cycle. Prokaryotic DNA replication is bi-directional and originates at a single origin of replication on the circular genome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication","synonyms":[{"name":"bacterial-type cell cycle DNA replication","type":"exact"}],"termid":"GO:0044787"}


id: PBO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric-chelate reductase Frp1","termid":"PBO:0003047"}


id: PBO:0068043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 348","termid":"PBO:0068043"}


id: MONDO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with deafness as a major feature (obsolete MONDO:0018295)","secondary_identifiers":["Orphanet:371212"],"synonyms":[{"name":"CDG with deafness as a major feature","type":"exact"}],"termid":"MONDO:0018295","xrefs":{"Monarch":{"xref_id":"0018295"}}}


id: MONDO:1010967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dandy-Walker syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dandy-Walker syndrome, non-human animal","termid":"MONDO:1010228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dandy-Walker syndrome, sheep","secondary_identifiers":["OMIA:000258-9940"],"termid":"MONDO:1010967","xrefs":{"Monarch":{"xref_id":"1010967"}}}


id: PBO:0030995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress_during_vegetative_growth","termid":"PBO:0030995"}


id: GO:0010247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a phosphate ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of phosphate ion","synonyms":[{"name":"phosphate ion detection","type":"exact"},{"name":"phosphate ion perception","type":"related"},{"name":"phosphate ion sensing","type":"related"}],"termid":"GO:0010247"}


id: GO:0043490
data:
  {"annotated_genes":["SJAG_03306","SJAG_01753","SJAG_00714","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87294,96067,111395,116161],"is_not":false,"summary":null,"term":"GO:0043490"}]},"cv_name":"biological_process","definition":"The process of transferring reducing equivalents from NADH in the cytosol to the mitochondria via malate. Cytosolic aspartate aminotransferase converts aspartate to oxaloacetate, and cytosolic malate dehydrogenase uses NADH to convert oxaloacetate to malate in the cytosol; the malate-alpha-ketoglutarate carrier then transports the malate into the mitochondria where mitochondrial malate dehydrogenase uses NAD to convert malate back to oxaloacetate; the electrons on the reduced NADH are then available for use in the electron transport chain; mitochondrial aspartate aminotransferase converts oxaloacetate to aspartate, and the glutamate-aspartate carrier transports the aspartate back to the cytosol to complete the cycle.","definition_xrefs":["PMID:16368075","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00714":null,"SJAG_01753":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"malate-aspartate shuttle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MALATE-ASPARTATE-SHUTTLE-PWY","Wikipedia:Malate-aspartate_shuttle","Reactome:R-HSA-9856872"],"synonyms":[{"name":"malate aspartate shuttle","type":"exact"},{"name":"malate/aspartate shuttle","type":"exact"},{"name":"malate:aspartate shuttle","type":"exact"}],"termid":"GO:0043490","terms_by_termid":{"GO:0043490":null}}


id: PBO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RAD7","termid":"PBO:0018106"}


id: MONDO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"},{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic diffuse goiter","secondary_identifiers":["UMLS:C0342122","DOID:10719","SCTID:267374005","ICD9:242.00","MEDGEN:488851"],"termid":"MONDO:0001104","xrefs":{"Monarch":{"xref_id":"0001104"}}}


id: FYPO:0006617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, elongated, and has a greater diameter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable elongated vegetative cell with increased cell diameter","synonyms":[{"name":"viable elongated cell with increased cell diameter during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell with increased cell diameter during mitotic cell cycle","type":"related"},{"name":"viable elongated vegetative cell with increased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with increased cell width","type":"exact"}],"termid":"FYPO:0006617"}


id: GO:0038065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by collagen binding to a cell surface receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:uh","GOC:bf","PMID:21568710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"collagen-activated signaling pathway","synonyms":[{"name":"collagen-activated signalling pathway","type":"exact"}],"termid":"GO:0038065"}


id: GO:0099113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytosolic calcium ion concentration","termid":"GO:0051481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099113"}


id: PBO:0054446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1843","termid":"PBO:0054446"}


id: PBO:0029709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_pH","termid":"PBO:0029709"}


id: PBO:0041647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 2","termid":"PBO:0041647"}


id: PBO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 5","termid":"PBO:0060297"}


id: GO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate.","definition_xrefs":["EC:3.1.3.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-hexakisphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-7920"],"synonyms":[{"name":"1D-myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"narrow"},{"name":"MIPP activity","type":"broad"},{"name":"inositol tetrakisphosphate phosphomonoesterase activity","type":"related"},{"name":"multiple inositol-polyphosphate phosphatase activity","type":"broad"}],"termid":"GO:0004446"}


id: GO:1902004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["GOC:TermGenie","PMID:17098871","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta formation","termid":"GO:1902003"},{"relation_name":"is_a","term_name":"positive regulation of amyloid precursor protein catabolic process","termid":"GO:1902993"},{"relation_name":"positively_regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid-beta formation","synonyms":[{"name":"activation of beta-amyloid formation","type":"narrow"},{"name":"positive regulation of beta-amyloid formation","type":"exact"},{"name":"up regulation of beta-amyloid formation","type":"exact"},{"name":"up-regulation of beta-amyloid formation","type":"exact"},{"name":"upregulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902004"}


id: PBO:0017092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, mitochondrial","termid":"PBO:0017092"}


id: GO:2000279
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"negatively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA anabolism","type":"exact"},{"name":"negative regulation of DNA biosynthesis","type":"exact"},{"name":"negative regulation of DNA formation","type":"exact"},{"name":"negative regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000279","terms_by_termid":{"GO:1904332":null}}


id: PBO:0068882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 122, pseudogene","termid":"PBO:0068882"}


id: MOD:02059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-valine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-valine residue","synonyms":[{"name":"XlnkVal","type":"exact"}],"termid":"MOD:02059"}


id: FYPO:0005904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type). Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"normal rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0005904"}


id: GO:0141043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids recognition by host's innate immune response by altering, concealing or destroying a conserved symbiont molecule recognized by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26502908","PMID:15014080","PMID:29101229","PMID:22131330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host innate immune response","synonyms":[{"name":"evasion of host innate immune recognition","type":"related"},{"name":"evasion of host innate immune response","type":"exact"}],"termid":"GO:0141043"}


id: PBO:0063219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8 pseudogene 1","termid":"PBO:0063219"}


id: MOD:00821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and an L-cysteine residue by a thioester bond to form S-(L-alanyl)-L-cysteine.","definition_xrefs":["RESID:AA0411","PubMed:11807079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-alanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-aminopropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Alanyl cysteine thioester (Cys-Ala)","type":"exact"},{"name":"S-(2-aminopropanoyl)cysteine","type":"exact"},{"name":"S-(L-alanyl)-L-cysteine","type":"exact"},{"name":"XLNK1AlaSCys","type":"exact"},{"name":"alanine cysteine thioester","type":"exact"}],"termid":"MOD:00821"}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: PBO:0031752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_vegetative_growth","termid":"PBO:0031752"}


id: GO:0015134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of hexuronates from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transporter activity","termid":"GO:0015133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"hexuronate transmembrane transporter activity","secondary_identifiers":["GO:0015163"],"synonyms":[{"name":"hexuronide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015134"}


id: PBO:0084212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homocitrate synthase isozyme and functions in DNA repair; catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; LYS20 has a paralog, LYS21, that arose from the whole genome duplication","termid":"PBO:0084212"}


id: PBO:0085592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud growth; involved in the transport of cell wall components from the Golgi to the cell surface; similar in structure and functionally redundant with Sbe2p; SBE22 has a paralog, SBE2, that arose from the whole genome duplication","termid":"PBO:0085592"}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: PBO:0046347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 5","termid":"PBO:0046347"}


id: PBO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP4A pseudogene 1","termid":"PBO:0043031"}


id: PBO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily A member 1","termid":"PBO:0061907"}


id: MONDO:1010654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, domestic cat","secondary_identifiers":["OMIA:000809-9685"],"termid":"MONDO:1010654","xrefs":{"Monarch":{"xref_id":"1010654"}}}


id: PBO:0056432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 5","termid":"PBO:0056432"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: PBO:0061025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 8","termid":"PBO:0061025"}


id: GO:0043039
data:
  {"annotated_genes":["SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.","definition_xrefs":["GOC:mah","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"},{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoacyl-tRNA biosynthesis","type":"exact"},{"name":"aminoacyl-tRNA biosynthetic process","type":"exact"},{"name":"tRNA charging","type":"exact"}],"termid":"GO:0043039","terms_by_termid":{"GO:0070127":null}}


id: MONDO:0007690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatase excess syndrome is a rare, genetic endocrine disease characterized by increased levels of estrogen due to elevated extraglandular aromatase activity. Males present with heterosexual precocious puberty which manifests with pre- or peripubertal onset of gynecomastia, premature growth spurt, accelerated bone maturation resulting in decreased adult stature, and may present mild hypogonadotropic hypogonadism. Female patients may have isosexual precocious puberty or not have any manifestations at all.","definition_xrefs":["Orphanet:178345"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","termid":"MONDO:0016072"},{"relation_name":"excluded_subClassOf","term_name":"precocious puberty in female","termid":"MONDO:0018561"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"aromatase excess syndrome","secondary_identifiers":["MESH:C000591739","GARD:12494","icd11.foundation:191989744","MEDGEN:409989","DOID:0090122","OMIM:139300","SCTID:709075008","ICD9:259.8","UMLS:C1970109"],"synonyms":[{"name":"AEXS","type":"exact"},{"name":"aromatase activity, increased","type":"related"},{"name":"aromatase excess syndrome","type":"exact"},{"name":"familial hyperestrogenism","type":"exact"},{"name":"gynecomastia, familial, due to increased aromatase activity","type":"exact"},{"name":"gynecomastia, hereditary","type":"exact"},{"name":"hereditary prepubertal gynecomastia","type":"exact"},{"name":"increased aromatase activity","type":"exact"}],"termid":"MONDO:0007690","xrefs":{"Monarch":{"xref_id":"0007690"}}}


id: PBO:0091954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf13","termid":"PBO:0091954"}


id: PBO:0049078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 119","termid":"PBO:0049078"}


id: MONDO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile glaucoma (obsolete MONDO:0001097)","termid":"MONDO:0001097","xrefs":{"Monarch":{"xref_id":"0001097"}}}


id: MOD:00745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a selenium atom or a cluster containing selenium for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenium containing residue","synonyms":[{"name":"SeRes","type":"exact"}],"termid":"MOD:00745"}


id: PBO:0040654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal body orientation factor 1","termid":"PBO:0040654"}


id: PBO:0063145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ crumbs cell polarity complex component","termid":"PBO:0063145"}


id: GO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:dph","GOC:mtg_sensu","MA:0001271","PMID:16638982","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"},{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraocular skeletal muscle development","termid":"GO:0002074"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: PBO:0034704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1","termid":"PBO:0034704"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


