# terms

id: MONDO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chudley-McCullough syndrome","secondary_identifiers":["Orphanet:314597","UMLS:C1858695","MESH:C535459","GARD:86","MEDGEN:347699","OMIM:604213"],"synonyms":[{"name":"CMCS","type":"related"},{"name":"Chudley-McCullough syndrome","type":"exact"},{"name":"deafness, autosomal recessive 82","type":"related"},{"name":"deafness, autosomal recessive 82, formerly","type":"related"},{"name":"deafness, bilateral sensorineural, and hydrocephalus due to foramen of Monro obstruction","type":"related"},{"name":"deafness, sensorineural, with partial agenesis of the corpus callosum and arachnoid cysts","type":"related"}],"termid":"MONDO:0011411","xrefs":{"Monarch":{"xref_id":"0011411"}}}


id: PBO:0060625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP1 pseudogene 1","termid":"PBO:0060625"}


id: PBO:0028071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_aseptate_mononucleate_vegetative_cell","termid":"PBO:0028071"}


id: PBO:0117111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 antisense RNA 2","termid":"PBO:0117111"}


id: GO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, desiccation, and UV than vegetative myxobacteria.","definition_xrefs":["ISBN:0122268008","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxospore formation","termid":"GO:0034303"}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: PBO:0028210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-queuosine_absent_from_tRNA","termid":"PBO:0028210"}


id: GO:0017022
data:
  {"annotated_genes":["SJAG_04781","SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73412,81758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032036"}]},"cv_name":"molecular_function","definition":"Binding to a myosin; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_04781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"myosin binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"myosin phosphatase myosin binding","type":"narrow"}],"termid":"GO:0017022","terms_by_termid":{"GO:0032036":null}}


id: GO:0000295
data:
  {"annotated_genes":["SJAG_04328","SJAG_00612","SJAG_02050","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[100888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[77538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"}]},"cv_name":"molecular_function","definition":"Enables the transfer of adenine nucleotides (AMP, ADP, and ATP) from one side of a membrane to the other.","definition_xrefs":["PMID:11566870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"adenine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-389652"],"termid":"GO:0000295","terms_by_termid":{"GO:0005471":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: MONDO:1012421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy with cerebellar abiotrophy, non-human animal","termid":"MONDO:1011886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy with cerebellar abiotrophy, domestic cat","secondary_identifiers":["OMIA:001606-9685"],"termid":"MONDO:1012421","xrefs":{"Monarch":{"xref_id":"1012421"}}}


id: PBO:0087662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); essential J-protein cochaperone that stimulates Ssc1p ATPase activity to drive import; inhibited by Pam16p","termid":"PBO:0087662"}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: PBO:0076292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncoilin, intermediate filament protein","termid":"PBO:0076292"}


id: PBO:0087334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl10p; co-translationally associates with nascent Rpl10p, preventing aggregation; involved in biogenesis of the ribosomal large subunit; contains multiple WD repeats; interacts genetically and physically with Qsr1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087334"}


id: MONDO:0012806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia and immune deficiency","termid":"MONDO:0010293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia and immunodeficiency 2","secondary_identifiers":["GARD:15542","MEDGEN:394295","MESH:C567411","NCIT:C176826","DOID:0081079","UMLS:C2677481","OMIM:612132"],"synonyms":[{"name":"EPAID2","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0012806","xrefs":{"Monarch":{"xref_id":"0012806"}}}


id: MONDO:1010192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy, non-human animal","termid":"MONDO:1010208"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, non-human animal","secondary_identifiers":["OMIA:000172"],"termid":"MONDO:1010192","xrefs":{"Monarch":{"xref_id":"1010192"}}}


id: MONDO:0100169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"polyneuropathy, inflammatory demyelinating, chronic","synonyms":[{"name":"CIDP","type":"exact"}],"termid":"MONDO:0100169","xrefs":{"Monarch":{"xref_id":"0100169"}}}


id: PBO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A1","termid":"PBO:0047132"}


id: PBO:0074692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70B","termid":"PBO:0074692"}


id: MOD:00259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of DNA through a phosphodiester bond to form O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["PubMed:2940511","RESID:AA0254","PubMed:3684578","PubMed:1861973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00259"}


id: FYPO:0005021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the actomyosin contractile ring for a shorter time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of protein localization to cell division site","termid":"FYPO:0002528"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"decreased duration of protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased duration of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased duration of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased duration of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased duration of protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased duration of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced duration of protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0005021"}


id: PBO:0067076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 107, pseudogene","termid":"PBO:0067076"}


id: PBO:0072620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head component 4A","termid":"PBO:0072620"}


id: GO:0051906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a pigment granule is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of vesicle location","termid":"GO:0051655"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of pigment granule location","synonyms":[{"name":"maintenance of pigment granule localization","type":"related"}],"termid":"GO:0051906"}


id: PBO:0062822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSER1 divergent transcript","termid":"PBO:0062822"}


id: GO:0019762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside catabolic process","termid":"GO:0016145"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"glucosinolate catabolic process","secondary_identifiers":["MetaCyc:PWY-5267"],"synonyms":[{"name":"glucosinolate breakdown","type":"exact"},{"name":"glucosinolate catabolism","type":"exact"},{"name":"glucosinolate degradation","type":"exact"}],"termid":"GO:0019762"}


id: PBO:0078282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 15-1","termid":"PBO:0078282"}


id: MONDO:1012155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic cat","secondary_identifiers":["OMIA:000631-9685"],"termid":"MONDO:1012155","xrefs":{"Monarch":{"xref_id":"1012155"}}}


id: PBO:0070970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 8","termid":"PBO:0070970"}


id: PBO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 like 1, pseudogene","termid":"PBO:0042275"}


id: GO:1903806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-isoleucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"isoleucine transmembrane transport","termid":"GO:1903714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-isoleucine import across plasma membrane","secondary_identifiers":["GO:0090476","GO:0090477"],"synonyms":[{"name":"L-isoleucine import","type":"broad"},{"name":"L-isoleucine import into cell","type":"exact"},{"name":"isoleucine import","type":"broad"}],"termid":"GO:1903806"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rl","GOC:BHF","PMID:22357537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: GO:0061382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule tip cell. A Malpighian tubule tip cell is a mitogenic signaling cell that controls the proliferation of its neighboring cells.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","PMID:7821213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule tip cell differentiation","termid":"GO:0061382"}


id: PBO:0055709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb development membrane protein 1","termid":"PBO:0055709"}


id: PBO:0073774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 8","termid":"PBO:0073774"}


id: GO:0120521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-(1,2 saturated acyl)-(4R)-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an N-(2R-hydroxyacyl)-4R-hydroxysphinganine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid 2-hydroxylase activity","termid":"GO:0080132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN3O-4042"],"termid":"GO:0120521"}


id: PBO:0077150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 1","termid":"PBO:0077150"}


id: MONDO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal cell neoplasm that affects the urinary bladder.","definition_xrefs":["NCIT:C4669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcoma","secondary_identifiers":["DOID:11812","MEDGEN:87612","SCTID:278046008","UMLS:C0349666"],"synonyms":[{"name":"bladder sarcoma","type":"exact"},{"name":"sarcoma of bladder","type":"exact"},{"name":"sarcoma of the bladder","type":"exact"},{"name":"sarcoma of the urinary bladder","type":"exact"},{"name":"sarcoma of urinary bladder","type":"exact"},{"name":"urinary bladder sarcoma","type":"exact"}],"termid":"MONDO:0001374","xrefs":{"Monarch":{"xref_id":"0001374"}}}


id: GO:0060111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Raised, thickened cuticular ridges that run longitudinally, and in parallel, along the left and right sides of the animal. The alae lie above the hypodermal cells known as the lateral seam cells. In C. elegans, alae are produced in L1 larvae, dauer larvae and adult stage animals, where they consist of three, five, and three ridges of distinct morphology, respectively.","definition_xrefs":["ISSN:15518507","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"alae of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"alae of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060111"}


id: PBO:0077451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 1","termid":"PBO:0077451"}


id: PBO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd2","termid":"PBO:0002443"}


id: PBO:0069974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1269, pseudogene","termid":"PBO:0069974"}


id: GO:0070019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A receptor complex that consists of two transforming growth factor beta (TGF-beta) type II receptor monomers. TGF-beta type II receptor dimers form in the presence or absence of ligand, and upon ligand binding can associate with TGF-beta type I receptor dimers.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta type II receptor homodimeric complex (obsolete GO:0070019)","synonyms":[{"name":"TGF-beta type II receptor complex","type":"exact"},{"name":"TGF-beta type II receptor dimer","type":"exact"},{"name":"TGFBR2 homodimer","type":"exact"},{"name":"transforming growth factor beta type II receptor complex","type":"exact"}],"termid":"GO:0070019"}


id: GO:1902060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","PMID:23480775","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"positively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"activation of ascus development","type":"narrow"},{"name":"activation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"activation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"activation of perfect stage fruiting body development","type":"narrow"},{"name":"activation of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"positive regulation of ascus development","type":"narrow"},{"name":"positive regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"positive regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"positive regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of ascus development","type":"narrow"},{"name":"up regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"up-regulation of ascus development","type":"narrow"},{"name":"up-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"upregulation of ascus development","type":"narrow"},{"name":"upregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"upregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"upregulation of perfect stage fruiting body development","type":"narrow"},{"name":"upregulation of sporocarp development involved in sexual reproduction","type":"exact"}],"termid":"GO:1902060"}


id: PBO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_morphology","termid":"PBO:0031839"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: MONDO:0100579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any orofacial clefting in which the cause of the disease is a mutation in the GRHL3 gene.","definition_xrefs":["PMID:28886269","PMID:34459660","PMID:27018475","PMID:24360809","PMID:36901693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL3-related orofacial clefting","termid":"MONDO:0100579","xrefs":{"Monarch":{"xref_id":"0100579"}}}


id: GO:0002546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"negatively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"down regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"negative regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002546"}


id: PBO:0072974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 5, pseudogene","termid":"PBO:0072974"}


id: GO:0044718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"siderophore transmembrane transport","synonyms":[{"name":"siderophore membrane transport","type":"exact"}],"termid":"GO:0044718"}


id: PBO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 6, pseudogene","termid":"PBO:0050914"}


id: MONDO:0003730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leukemia characterized by the absence of leukemic cells in the peripheral blood.","definition_xrefs":["NCIT:C4982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"aleukemic leukemia","secondary_identifiers":["MEDGEN:164094","SCTID:302856006","ICD9:208.80","DOID:6004","DOID:12965","UMLS:C0877858"],"synonyms":[{"name":"aleukemic leukemia","type":"exact"},{"name":"aleukemic myelosis","type":"related"},{"name":"subleukemic leukaemia","type":"related"},{"name":"subleukemic leukemia","type":"related"}],"termid":"MONDO:0003730","xrefs":{"Monarch":{"xref_id":"0003730"}}}


id: GO:0140775
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92017],"is_not":false,"summary":null,"term":"GO:0140775"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament and promoting the dissociation of an actin filament branch.","definition_xrefs":["PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament debranching activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin debranching activity","type":"exact"}],"termid":"GO:0140775","terms_by_termid":{"GO:0140775":null}}


id: PBO:0059791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 17","termid":"PBO:0059791"}


id: GO:0140009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000069","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-aspartate import across plasma membrane","termid":"GO:0140009"}


id: PBO:0058470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5572","termid":"PBO:0058470"}


id: GO:0034234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of ascospore wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ascospore wall chitin catabolic process (obsolete GO:0034234)","synonyms":[{"name":"regulation of ascospore wall chitin breakdown","type":"exact"},{"name":"regulation of ascospore wall chitin catabolism","type":"exact"},{"name":"regulation of ascospore wall chitin degradation","type":"exact"}],"termid":"GO:0034234"}


id: PR:O14114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abo1 gene.","definition_xrefs":["UniProtKB:O14114","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C31G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.19","synonyms":[{"name":"Spom972h-abo1","type":"exact"}],"termid":"PR:O14114"}


id: GO:0009513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid arrested in the development of chloroplasts from proplastids due to absence of light or low light conditions.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast","secondary_identifiers":["Wikipedia:Etioplast"],"termid":"GO:0009513"}


id: PBO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 20 subfamily A member 1","termid":"PBO:0044477"}


id: PBO:0051326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-14 (pseudogene)","termid":"PBO:0051326"}


id: GO:0071238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brefeldin A","termid":"GO:0031001"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brefeldin A","termid":"GO:0071238"}


id: FYPO:0004454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of calcium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to calcium","synonyms":[{"name":"resistance to calcium during mitotic cell cycle","type":"related"},{"name":"resistance to calcium during vegetative growth","type":"exact"},{"name":"resistance to calcium ion","type":"exact"},{"name":"resistance to calcium ions","type":"exact"},{"name":"resistant to calcium","type":"exact"}],"termid":"FYPO:0004454"}


id: PBO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (predicted)","termid":"PBO:0002505"}


id: PBO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit epsilon","termid":"PBO:0048207"}


id: MONDO:0004480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic invasive intraductal papillary-mucinous carcinoma (obsolete MONDO:0004480)","termid":"MONDO:0004480","xrefs":{"Monarch":{"xref_id":"0004480"}}}


id: PBO:0076896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 50","termid":"PBO:0076896"}


id: PBO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trna Adenosine Deaminase","termid":"PBO:0001072"}


id: GO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["RHEA:23676","EC:6.3.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALGLDAPLIG-RXN","KEGG_REACTION:R02788"],"synonyms":[{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:(L)-meso-2,6-diaminoheptanedioate gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-2,6-diamino-heptanedioate ligase (ADP-forming) activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl-tripeptide synthetase activity","type":"related"}],"termid":"GO:0008765"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21785459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: PBO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Atf31","termid":"PBO:0000544"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72517],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.3.1","RHEA:23032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:AIRS-RXN","Reactome:R-HSA-73810","KEGG_REACTION:R04208"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: PATO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased coordination","synonyms":[{"name":"low coordination","type":"exact"}],"termid":"PATO:0001860"}


id: MONDO:0013344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any migraine disorder in which the cause of the disease is a mutation in the KCNK18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, with or without aura, susceptibility to, 13","secondary_identifiers":["UMLS:C4225479","MEDGEN:900808","OMIM:613656"],"synonyms":[{"name":"KCNK18 migraine disorder","type":"exact"},{"name":"MGR13","type":"related"},{"name":"migraine disorder caused by mutation in KCNK18","type":"exact"},{"name":"migraine with or without aura, susceptibility to, 13","type":"related"},{"name":"migraine, with or without aura, susceptibility to, 13","type":"exact"},{"name":"migraine, with or without aura, susceptibility to, type 13","type":"exact"},{"name":"susceptibility to migraine with or without aura 13","type":"related"}],"termid":"MONDO:0013344","xrefs":{"Monarch":{"xref_id":"0013344"}}}


id: FYPO:0002452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell contains one or more septa, has abnormal morphology (i.e. size, shape, or structure) and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable septated vegetative cell with abnormal cell morphology","synonyms":[{"name":"lethal; septated vegetative cell with abnormal cell morphology","type":"exact"}],"termid":"FYPO:0002452"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: MONDO:0957253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 13","secondary_identifiers":["OMIM:620357","UMLS:C5830477","MEDGEN:1841113"],"termid":"MONDO:0957253","xrefs":{"Monarch":{"xref_id":"0957253"}}}


id: MONDO:0009942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyknoachondrogenesis is a lethal skeletal osteochondrodysplasia characterized by severe generalized osteosclerosis.","definition_xrefs":["Orphanet:3003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pyknoachondrogenesis","secondary_identifiers":["MESH:C536251","icd11.foundation:588435239","MEDGEN:337844","SCTID:719258003","UMLS:C1849523","OMIM:265880","GARD:4610"],"synonyms":[{"name":"association of skeletal defects resembling achondrogenesis with generalised bone sclerosis","type":"related"},{"name":"association of skeletal defects resembling achondrogenesis with generalized bone sclerosis","type":"related"},{"name":"camera syndrome","type":"exact"},{"name":"pyknoachondrogenesis","type":"exact"}],"termid":"MONDO:0009942","xrefs":{"Monarch":{"xref_id":"0009942"}}}


id: MONDO:0006710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent partial seizures marked by impairment of cognition. During the seizure the individual may experience a wide variety of psychic phenomenon including formed hallucinations, illusions, deja vu, intense emotional feelings, confusion, and spatial disorientation. Focal motor activity, sensory alterations and automatism may also occur. Complex partial seizures often originate from foci in one or both temporal lobes. The etiology may be idiopathic (cryptogenic partial complex epilepsy) or occur as a secondary manifestation of a focal cortical lesion (symptomatic partial complex epilepsy). (From Adams et al., Principles of Neurology, 6th ed, pp317-8)","definition_xrefs":["MESH:D017029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"complex partial epilepsy","secondary_identifiers":["EFO:1000877","ICD9:345.40","UMLS:C0085417","DOID:12382","MEDGEN:43169","SCTID:407675009"],"synonyms":[{"name":"Complex partial epileptic seizure","type":"exact"},{"name":"epilepsy, psychomotor","type":"exact"},{"name":"psychomotor epilepsy","type":"exact"}],"termid":"MONDO:0006710","xrefs":{"Monarch":{"xref_id":"0006710"}}}


id: GO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin-glucuronoside = bilirubin + bilirubin-bisglucuronoside.","definition_xrefs":["RHEA:16885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"bilirubin-glucuronoside glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00062"],"synonyms":[{"name":"bilirubin glucuronoside glucuronosyltransferase activity","type":"exact"},{"name":"bilirubin monoglucuronide transglucuronidase activity","type":"exact"},{"name":"bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0047278"}


id: FYPO:0004262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004262"}


id: PBO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type","termid":"PBO:0000153"}


id: PBO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin related protein","termid":"PBO:0047665"}


id: GO:0102723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin = curcumin monoglucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin glucosyltransferase activity (obsolete GO:0102723)","termid":"GO:0102723"}


id: PBO:0055075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2492","termid":"PBO:0055075"}


id: SO:0000891
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is negatively autoreguated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"negatively_autoregulated","termid":"SO:0000473"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated_gene","synonyms":[{"name":"negatively autoregulated gene","type":"exact"}],"termid":"SO:0000891"}


id: PBO:0038718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 13","termid":"PBO:0038718"}


id: GO:0120505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl79-[histone H3] + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15371351","RHEA:60332","PMID:14732680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0140096","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"histone H3K79 monomethyltransferase activity","termid":"GO:0120505"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: PBO:0079763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin recognition factor in ER associated degradation 1","termid":"PBO:0079763"}


id: MONDO:0020533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Streptobacillary rat-bite fever (RBF) is a systemic zoonosis caused by the aerobic gram-negative bacterium Streptobacillus moniliformis and is transmitted to humans through the bites and scratches of infected rats.","definition_xrefs":["Orphanet:99905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"streptobacillus infectious disease","termid":"MONDO:0001667"},{"relation_name":"is_a","term_name":"rat-bite fever","termid":"MONDO:0006941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptobacillary rat-bite fever","secondary_identifiers":["DOID:13238","ICD9:026.1","UMLS:C0152063","SCTID:52138004","GARD:19702","icd11.foundation:614000128","MEDGEN:508864"],"synonyms":[{"name":"Haverhill fever","type":"exact"},{"name":"Streptobacillary fever","type":"exact"},{"name":"Streptobacillosis","type":"related"},{"name":"streptobacillary rat-bite fever","type":"exact"}],"termid":"MONDO:0020533","xrefs":{"Monarch":{"xref_id":"0020533"}}}


id: MONDO:0958161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is associated with PAX5 P80R mutation.","definition_xrefs":["DOID:0081411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with PAX5 P80R mutation","secondary_identifiers":["MEDGEN:1846082","NCIT:C199260","UMLS:C5855498"],"termid":"MONDO:0958161","xrefs":{"Monarch":{"xref_id":"0958161"}}}


id: GO:1903223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GOC:TermGenie","PMID:23858059","GOC:bf","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxidative stress-induced neuron death (obsolete GO:1903223)","synonyms":[{"name":"activation of neuron death in response to oxidative stress","type":"narrow"},{"name":"activation of neuronal cell death in response to oxidative stress","type":"narrow"},{"name":"activation of oxidative stress-induced neuron death","type":"narrow"},{"name":"positive regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"positive regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"sensitization of neuron to oxidative stress-induced cell death","type":"related"},{"name":"up regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"up regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"up regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"up-regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"up-regulation of oxidative stress-induced neuron death","type":"exact"},{"name":"upregulation of neuron death in response to oxidative stress","type":"exact"},{"name":"upregulation of neuronal cell death in response to oxidative stress","type":"exact"},{"name":"upregulation of oxidative stress-induced neuron death","type":"exact"}],"termid":"GO:1903223"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: GO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular carbohydrate metabolic process (obsolete GO:0010676)","termid":"GO:0010676"}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["GOC:dos","PMID:20098723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: GO:0070647
data:
  {"annotated_genes":["SJAG_00615","SJAG_00878","SJAG_03950","SJAG_01018","SJAG_02764","SJAG_01776","SJAG_05977","SJAG_05297","SJAG_03616","SJAG_00795","SJAG_03896","SJAG_04948","SJAG_02341","SJAG_00720","SJAG_00776","SJAG_04011","SJAG_00033","SJAG_05032","SJAG_03843","SJAG_00727","SJAG_03733","SJAG_01302","SJAG_02503","SJAG_03325","SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80577,90926,106046,92483,94793,109906,82233,89102,92362,72776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[75932,73121,74658,81469,88711,76834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[74280,97264,74262,77221,77329,77446,114246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[72416,62665,75961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00720":null,"SJAG_00727":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02341":null,"SJAG_02503":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03616":null,"SJAG_03733":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05032":null,"SJAG_05297":null,"SJAG_05977":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0070647","terms_by_termid":{"GO:0000338":null,"GO:0016925":null,"GO:0032447":null,"GO:0045116":null}}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_03286","SJAG_03635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71878,76715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0032452"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9822467","Reactome:R-HSA-9822461"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0034647":null}}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: FYPO:0002954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-adenosyl-3-thiopropylamine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-adenosyl-3-thiopropylamine level during G0","synonyms":[{"name":"increased S-adenosyl-3-thiopropylamine accumulation during G0","type":"related"},{"name":"increased S-adenosyl-3-thiopropylamine level during cell quiescence","type":"exact"},{"name":"increased S-adenosyl-3-thiopropylamine level during quiescence","type":"exact"}],"termid":"FYPO:0002954"}


id: PBO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AC member 1 pseudogene","termid":"PBO:0061911"}


id: GO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide catabolic process (obsolete GO:0030806)","synonyms":[{"name":"down regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide catabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"negative regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"negative regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030806"}


id: PBO:0088819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase","termid":"PBO:0088819"}


id: FYPO:0001081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall alpha-glucan level","synonyms":[{"name":"decreased cell wall alpha-D-glucan level","type":"exact"},{"name":"decreased cell wall alpha-glucan accumulation","type":"related"},{"name":"decreased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall alpha-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall alpha-glucan level","type":"exact"}],"termid":"FYPO:0001081"}


id: PBO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.4.1.1","termid":"PBO:0003947"}


id: MONDO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with vestibular fistula (obsolete MONDO:0035785)","secondary_identifiers":["Orphanet:600993"],"termid":"MONDO:0035785","xrefs":{"Monarch":{"xref_id":"0035785"}}}


id: GO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) = neutral L-amino acid(in) + Na+(in).","definition_xrefs":["TC:2.A.23.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"neutral L-amino acid:sodium symporter activity","secondary_identifiers":["GO:0005282"],"synonyms":[{"name":"neutral amino acid-sodium cotransporter","type":"broad"},{"name":"neutral amino acid:sodium symporter activity","type":"exact"},{"name":"sodium/neutral amino acid transporter","type":"broad"}],"termid":"GO:0005295"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: GO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host rhizosphere (obsolete GO:0044136)","termid":"GO:0044136"}


id: SO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_uridine","secondary_identifiers":["RNAMOD:103"],"synonyms":[{"name":"5-(isopentenylaminomethyl)uridine","type":"exact"},{"name":"five isopentenylaminomethyl uridine","type":"exact"},{"name":"inm5U","type":"exact"}],"termid":"SO:0001380"}


id: GO:0044265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule catabolic process (obsolete GO:0044265)","synonyms":[{"name":"cellular biopolymer catabolic process","type":"exact"},{"name":"cellular macromolecule breakdown","type":"exact"},{"name":"cellular macromolecule catabolism","type":"exact"},{"name":"cellular macromolecule degradation","type":"exact"}],"termid":"GO:0044265"}


id: PBO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 5","termid":"PBO:0052063"}


id: PomGeneEx:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","synonyms":[{"name":"gene expression absent","type":"exact"},{"name":"gene product absent","type":"exact"}],"termid":"PomGeneEx:0000006"}


id: PBO:0038409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_positively_regulates_activity_of","termid":"PBO:0038409"}


id: MONDO:0800313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum-Cockayne syndrome complex","termid":"MONDO:0016354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum, type F/Cockayne syndrome","secondary_identifiers":["MEDGEN:812895","UMLS:C3806565"],"synonyms":[{"name":"XPF/CS","type":"exact"}],"termid":"MONDO:0800313","xrefs":{"Monarch":{"xref_id":"0800313"}}}


id: SO:1001190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different stop codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_different_polypeptides_different_stop","synonyms":[{"name":"encodes different polypeptides different stop","type":"exact"}],"termid":"SO:1001190"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: PBO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0001283"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["UniProtKB:Q9UU99","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: GO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ornithine metabolic process","synonyms":[{"name":"D-ornithine metabolism","type":"exact"}],"termid":"GO:0033056"}


id: PBO:0089135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease family, related to holliday junction resolvases, implicated in DNA or tRNA metabolism","termid":"PBO:0089135"}


id: GO:0048849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neurohypophysis morphogenesis","termid":"GO:0048848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis formation","synonyms":[{"name":"neurophysis biosynthesis","type":"exact"},{"name":"neurophysis formation","type":"exact"},{"name":"posterior pituitary biosynthesis","type":"exact"},{"name":"posterior pituitary formation","type":"exact"},{"name":"posterior pituitary gland biosynthesis","type":"exact"},{"name":"posterior pituitary gland formation","type":"exact"}],"termid":"GO:0048849"}


id: FYPO:0001443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription during vegetative growth","synonyms":[{"name":"abolished transcription during mitotic cell cycle","type":"related"},{"name":"transcription abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001443"}


id: PBO:0029533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuole_fusion_during_cellular_hypotonic_response","termid":"PBO:0029533"}


id: MONDO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Dandy-Walker malformation and hydrocephalus is a malformation disorder characterized by sagittal craniosynostosis, Dandy-Walker malformation, hydrocephalus, craniofacial dysmorphism (including dolichocephaly, hypertelorism, micrognathia, positional ear deformity) and variable developmental delay. The inheritance pattern appears to be autosomal dominant.","definition_xrefs":["Orphanet:1538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0020022"],"is_obsolete":false,"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","secondary_identifiers":["GARD:998","SCTID:720813007","MESH:C563973","MEDGEN:325006","OMIM:123155","UMLS:C1838347"],"synonyms":[{"name":"Braddock Jones Superneau syndrome","type":"related"},{"name":"Braddock-Jones-Superneau syndrome","type":"exact"},{"name":"Dandy-Walker malformation with sagittal craniosynostosis and hydrocephalus","type":"related"},{"name":"HDCPH1","type":"related"},{"name":"craniosynostosis-Dandy-Walker malformation-hydrocephalus syndrome","type":"exact"},{"name":"hydrocephalus, autosomal dominant","type":"related"},{"name":"sagittal craniosynostosis, Dandy-Walker malformation and hydrocephalus","type":"related"}],"termid":"MONDO:0007401","xrefs":{"Monarch":{"xref_id":"0007401"}}}


id: PATO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cup-shaped","termid":"PATO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupulate","termid":"PATO:0002342"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: MONDO:1012164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"micromelia, non-human animal","termid":"MONDO:1011765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, chicken","secondary_identifiers":["OMIA:000648-9031"],"termid":"MONDO:1012164","xrefs":{"Monarch":{"xref_id":"1012164"}}}


id: PBO:0041500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71B, pseudogene","termid":"PBO:0041500"}


id: RO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a specifically dependent continuant (the dependent), in which the dependent specifically depends on the bearer for its existence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bearer_of","termid":"RO:0000053"}


id: MONDO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurodegenerative disorder caused by a disruption in the connection between the striatum and the substantia nigra. It is a type of multiple system atrophy (MSA). Signs and symptoms include rigidity, instability, impaired speech, and slow movements.","definition_xrefs":["NCIT:C125695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559"],"is_obsolete":false,"name":"striatonigral degeneration","secondary_identifiers":["MESH:D020955","SCTID:29618004","DOID:4751","OMIMPS:271930","ICD10CM:G23.2","ICD9:333.0","MEDGEN:124366","UMLS:C0270733","icd11.foundation:195535779"],"termid":"MONDO:0003122","xrefs":{"Monarch":{"xref_id":"0003122"}}}


id: PBO:0069359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 619, pseudogene","termid":"PBO:0069359"}


id: GO:0051014
data:
  {"annotated_genes":["SJAG_03025","SJAG_03380","SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71864,100441],"is_not":false,"summary":null,"term":"GO:0051014"},{"annotations":[76273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"The process in which an actin filament is broken down into smaller filaments.","definition_xrefs":["GOC:ai","PMID:14657234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03025":null,"SJAG_03380":null,"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament severing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"F-actin severing","type":"exact"},{"name":"actin filament severing activity","type":"related"},{"name":"barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:0051014","terms_by_termid":{"GO:0051014":null,"GO:0071846":null}}


id: PBO:0087061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2B; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2B has a paralog, RPL2A, that arose from the whole genome duplication; expression is upregulated at low temperatures","termid":"PBO:0087061"}


id: PBO:0050610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 3","termid":"PBO:0050610"}


id: MONDO:0007728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial acne inversa in which the cause of the disease is a mutation in the NCSTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial acne inversa","termid":"MONDO:0024516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acne inversa, familial, 1","secondary_identifiers":["MEDGEN:1631104","OMIM:142690","UMLS:C4551962"],"synonyms":[{"name":"ACNINV1","type":"related"},{"name":"NCSTN familial acne inversa","type":"exact"},{"name":"acne inversa, familial","type":"related"},{"name":"acne inversa, familial, 1","type":"exact"},{"name":"acne inversa, familial, type 1","type":"exact"},{"name":"familial acne inversa caused by mutation in NCSTN","type":"exact"},{"name":"hidradenitis suppurativa, familial","type":"related"}],"termid":"MONDO:0007728","xrefs":{"Monarch":{"xref_id":"0007728"}}}


id: GO:0015081
data:
  {"annotated_genes":["SJAG_01541","SJAG_04616","SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[79879,81835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sodium ions (Na+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0022816"],"synonyms":[{"name":"sodium transporter activity","type":"exact"}],"termid":"GO:0015081","terms_by_termid":{"GO:0008554":null,"GO:0015385":null}}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: MONDO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IDDGIP is an autosomal dominant syndromic neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability with speech delay, and behavioral abnormalities. Most patients have variable additional features, including feeding and gastrointestinal difficulties, high pain threshold and/or hypersensitivity to sound, and dysmorphic features, including mild facial abnormalities, strabismus, and small hands and feet (summary by {1:Jansen et al., 2017}).","definition_xrefs":["OMIM:617450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with gastrointestinal difficulties and high pain threshold","secondary_identifiers":["MEDGEN:1385744","UMLS:C4479517","Orphanet:653767"],"synonyms":[{"name":"IDDGIP","type":"related"},{"name":"Jansen de Vries syndrome","type":"exact"},{"name":"intellectual developmental disorder with gastrointestinal difficulties and high pain threshold","type":"exact"}],"termid":"MONDO:0044318","xrefs":{"Monarch":{"xref_id":"0044318"}}}


id: PBO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein family member 4","termid":"PBO:0048183"}


id: PBO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A dioxygenase Ofd2","termid":"PBO:0017830"}


id: PBO:0030772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_thiabendazole","termid":"PBO:0030772"}


id: PBO:0048657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase","termid":"PBO:0048657"}


id: _global:regulates_o_has_agent
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship between the regulation of a process and the agent that executes that process.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_agent","secondary_identifiers":["GOREL:0001011"],"synonyms":[{"name":"regulates_o_has_agent","type":"exact"}],"termid":"_global:regulates_o_has_agent"}


id: PR:O94583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.11c","synonyms":[{"name":"Spom972h-SPCC1442.11c","type":"exact"}],"termid":"PR:O94583"}


id: PBO:0060331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIA","termid":"PBO:0060331"}


id: MONDO:0100383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;19)(q23;p13). (A cytogenetic abnormality that refers to the translocation of the long arm (q23) of chromosome 11 and the short arm (p13) of chromosome 19. It is associated with KMT2A (MLL) fusions, including those with MLLT1 (ENL) and ELL, and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;19)(q23;p13)","synonyms":[{"name":"AML, t(11;19)(q23;p13)","type":"exact"}],"termid":"MONDO:0100383","xrefs":{"Monarch":{"xref_id":"0100383"}}}


id: GO:0009401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.","definition_xrefs":["PMID:31209249","PMID:33820910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phosphoenolpyruvate-dependent sugar phosphotransferase system","synonyms":[{"name":"PTS system","type":"narrow"}],"termid":"GO:0009401"}


id: PBO:0075779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 5","termid":"PBO:0075779"}


id: MONDO:0015402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibular arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the mandibular area, commonly presenting with minor gingival bleeding, dental loosening, lower lip numbness, facial deformity and malocclusion. This usually high-flow vascular malformation may also present with potentially life-threatening, spontaneous, or tooth extraction-induced, hemorrhagic shock.","definition_xrefs":["Orphanet:141174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibular arteriovenous malformation","secondary_identifiers":["MEDGEN:825297","UMLS:C3839452","GARD:19957","SCTID:703334000","icd11.foundation:113998538"],"synonyms":[{"name":"arteriovenous malformation of mandible","type":"exact"}],"termid":"MONDO:0015402","xrefs":{"Monarch":{"xref_id":"0015402"}}}


id: GO:1902808
data:
  {"annotated_genes":["SJAG_02404","SJAG_04140","SJAG_02723","SJAG_03681","SJAG_02810","SJAG_01401","SJAG_01825","SJAG_01311","SJAG_03048","SJAG_01210","SJAG_03591","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101901,108755,105522,105360,106208,116681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[76741,114939,91223,78497,108463,115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G1/S phase transition","termid":"GO:1902806"},{"relation_name":"positively_regulates","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G1/S phase transition","type":"narrow"},{"name":"up regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"up-regulation of cell cycle G1/S phase transition","type":"exact"},{"name":"upregulation of cell cycle G1/S phase transition","type":"exact"}],"termid":"GO:1902808","terms_by_termid":{"GO:0007089":null,"GO:1900087":null}}


id: PBO:0051703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INPP5B antisense RNA 1","termid":"PBO:0051703"}


id: FYPO:0001339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to starvation for one or more nutrients is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to starvation during vegetative growth","synonyms":[{"name":"abnormal cellular response to depletion during vegetative growth","type":"exact"},{"name":"abnormal cellular response to deprivation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001339"}


id: GO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A conjugation process that results in the mutual exchange and union of only genetic information between compatible mating types. Conjugation without cellular fusion requires direct cellular contact between the organisms without plasma membrane fusion. The organisms involved in conjugation without cellular fusion separate after nuclear exchange.","definition_xrefs":["GOC:elh","PMID:22444146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conjugation with mutual genetic exchange","synonyms":[{"name":"conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000748"}


id: PBO:0053872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1148","termid":"PBO:0053872"}


id: PBO:0073190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 1","termid":"PBO:0073190"}


id: _global:has_exclusion_reason
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exclusion_reason","termid":"_global:has_exclusion_reason","xrefs":{"Monarch":{"xref_id":"has_exclusion_reason"}}}


id: PBO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_proline","termid":"PBO:0036026"}


id: PBO:0033819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Srp2","termid":"PBO:0033819"}


id: GO:1904109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholesterol import.","definition_xrefs":["PMID:16772292","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"positively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of cholesterol import","synonyms":[{"name":"activation of cholesterol import","type":"narrow"},{"name":"activation of cholesterol uptake","type":"narrow"},{"name":"positive regulation of cholesterol uptake","type":"exact"},{"name":"up regulation of cholesterol import","type":"exact"},{"name":"up regulation of cholesterol uptake","type":"exact"},{"name":"up-regulation of cholesterol import","type":"exact"},{"name":"up-regulation of cholesterol uptake","type":"exact"},{"name":"upregulation of cholesterol import","type":"exact"},{"name":"upregulation of cholesterol uptake","type":"exact"}],"termid":"GO:1904109"}


id: PBO:0113340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; well conserved across Saccharomyces species; added to genome annotation based on proteomic, translation, and evolutionary evidence","termid":"PBO:0113340"}


id: PR:O94543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1322 gene.","definition_xrefs":["UniProtKB:O94543","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1322.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.03","synonyms":[{"name":"Spom972h-trp1322","type":"exact"}],"termid":"PR:O94543"}


id: GO:0061712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N(6)-L-threonylcarbamoyladenine(37) in tRNA + sulfur-(sulfur carrier) + 2 S-adenosyl-L-methionine = 2-methylthio-N(6)-L-threonylcarbamoyladenine(37) in tRNA + S-adenosyl-L-homocysteine + (sulfur carrier) + L-methionine + 5'-deoxyadenosine.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase (obsolete GO:0061712)","termid":"GO:0061712"}


id: GO:0051077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cell wall structures composed of linear polysaccharides which are deposited at both sides of the primary septum at 90 degrees to the primary septum.","definition_xrefs":["GOC:mtg_sensu","PMID:15194814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division septum","termid":"GO:0000935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0000935"}],"interesting_parent_ids":["GO:0005575","GO:0000935"],"is_obsolete":false,"name":"secondary cell septum","synonyms":[{"name":"secondary septum","type":"broad"}],"termid":"GO:0051077"}


id: PBO:0074297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLU7 homolog, splicing factor","termid":"PBO:0074297"}


id: PBO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set3","termid":"PBO:0002816"}


id: PR:O13947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial tRNA-specific 2-thiouridylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11933:SF0","PRO:DNx","OMA:SCHPO00647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.04","secondary_identifiers":["UniProtKB:O13947"],"synonyms":[{"name":"Spom972h-TRMU","type":"exact"}],"termid":"PR:O13947"}


id: PBO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 8","termid":"PBO:0060190"}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: GO:1904273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of L-alanine from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:kmv","PMID:21097500","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alanine transmembrane transport","termid":"GO:1904557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-alanine import across plasma membrane","termid":"GO:1904273"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["GOC:kmv","PMID:11390637","Wikipedia:Habituation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: GO:2000573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"positively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA biosynthetic process","synonyms":[{"name":"positive regulation of DNA anabolism","type":"exact"},{"name":"positive regulation of DNA biosynthesis","type":"exact"},{"name":"positive regulation of DNA formation","type":"exact"},{"name":"positive regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000573"}


id: PBO:0040958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 29","termid":"PBO:0040958"}


id: PBO:0060473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase pseudogene 3","termid":"PBO:0060473"}


id: MONDO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed lung neoplasm morphologically characterized by the presence of cystic spaces resembling alveoli, lined by a simple cuboidal epithelium. The cystic spaces are surrounded by a spindle cell stroma which may show myxoid changes. It is a solitary, usually peripheral lung lesion. Patients are usually asymptomatic and its discovery is an incidental finding during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alveoli adenoma","secondary_identifiers":["MEDGEN:137740","DOID:8003","NCIT:C4140","UMLS:C0334303","ICDO:8251/0"],"synonyms":[{"name":"adenoma of alveoli","type":"exact"},{"name":"adenoma of the alveoli","type":"exact"},{"name":"adenoma, bronchioloalveolar, benign","type":"exact"},{"name":"alveolar adenoma","type":"exact"},{"name":"alveolar adenoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004428","xrefs":{"Monarch":{"xref_id":"0004428"}}}


id: GO:0007036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions in the vacuole or between a vacuole and its surroundings.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"vacuolar calcium ion homeostasis","termid":"GO:0007036"}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0087126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein; has similarity to mammalian heterogeneous nuclear RNP K protein, involved in the regulation of telomere position effect and telomere length; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087126"}


id: GO:0141184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an anti-inflammatory cytokine signaling pathway in the host organism by initiating, promoting, or enhancing its activation.","definition_xrefs":["PMID:27437422","PMID:23284742","PMID:29924996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host anti-inflammatory cytokine signaling","termid":"GO:0141184"}


id: GO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial catalase-peroxidase activity (obsolete GO:0016694)","synonyms":[{"name":"bacterial catalase-peroxidase activity","type":"exact"}],"termid":"GO:0016694"}


id: GO:0035689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by chemokine CCL5 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:18337562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 signaling pathway","synonyms":[{"name":"CCL5-mediated signaling pathway","type":"exact"},{"name":"RANTES-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 5 signalling pathway","type":"exact"}],"termid":"GO:0035689"}


id: MOD:00928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:513","PubMed:16771548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[3-(2,5)-dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","synonyms":[{"name":"C8-QAT","type":"related"},{"name":"[3-(2,5)-Dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","type":"related"}],"termid":"MOD:00928"}


id: PBO:0062892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L mitochondrial inner membrane protein","termid":"PBO:0062892"}


id: GO:0045015
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113223],"is_not":false,"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to a HDEL sequence, the C terminus tetrapeptide sequence His-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:1327759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"HDEL sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDEL receptor activity","type":"narrow"}],"termid":"GO:0045015","terms_by_termid":{"GO:0045015":null}}


id: MONDO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental site trophoblastic tumor (obsolete MONDO:0006911)","termid":"MONDO:0006911","xrefs":{"Monarch":{"xref_id":"0006911"}}}


id: GO:0070781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotin","synonyms":[{"name":"response to Bios IIB","type":"exact"},{"name":"response to coenzyme R","type":"exact"},{"name":"response to vitamin B7","type":"exact"},{"name":"response to vitamin H","type":"exact"}],"termid":"GO:0070781"}


id: PBO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific ribonuclease Pac1","termid":"PBO:0003316"}


id: PBO:0063253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta cluster","termid":"PBO:0063253"}


id: GO:0071630
data:
  {"annotated_genes":["SJAG_00054","SJAG_01737","SJAG_05022","SJAG_04612","SJAG_03657","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78326,110430],"is_not":false,"summary":null,"term":"GO:0071630"},{"annotations":[88723,87245,112573,102936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"}]},"cv_name":"biological_process","definition":"A protein quality control pathway that results in the breakdown of misfolded, damaged or unassembled proteins via a mechanism in which the proteins are ubiquitinated, and then targeted to nuclear proteasomes for degradation.","definition_xrefs":["PMID:20080635","PMID:21211726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"},{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"},{"relation_name":"part_of","term_name":"cellular response to misfolded protein","termid":"GO:0071218"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_01737":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"nuclear protein quality control by the ubiquitin-proteasome system","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleus-associated proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"nucleus-associated proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"nucleus-associated proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"ubiquitin-dependent catabolism of misfolded proteins by nucleus-associated proteasome","type":"exact"}],"termid":"GO:0071630","terms_by_termid":{"GO:0071630":null,"GO:0180027":null}}


id: GO:1902722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GO_REF:0000058","PMID:16159377","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of prolactin secretion","synonyms":[{"name":"activation of prolactin secretion","type":"narrow"},{"name":"up regulation of prolactin secretion","type":"exact"},{"name":"up-regulation of prolactin secretion","type":"exact"},{"name":"upregulation of prolactin secretion","type":"exact"}],"termid":"GO:1902722"}


id: GO:0034198
data:
  {"annotated_genes":["SJAG_02424","SJAG_02292","SJAG_02389","SJAG_00169","SJAG_01184","SJAG_02331","SJAG_00209","SJAG_02026","SJAG_02973","SJAG_04873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62860,73293,73894,75413,75759,77671,94167,94718],"is_not":false,"summary":null,"term":"GO:0034198"},{"annotations":[68112,71107],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903833"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to amino acid starvation","termid":"GO:1990928"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_01184":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02973":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amino acid starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9633012","Reactome:R-HSA-9639288"],"synonyms":[{"name":"GAAC response","type":"narrow"},{"name":"general amino acid control response","type":"narrow"}],"termid":"GO:0034198","terms_by_termid":{"GO:0034198":null,"GO:1903833":null}}


id: PBO:0039191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1 pseudogene 2","termid":"PBO:0039191"}


id: PR:Q9UTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01605","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C1071.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.09c","secondary_identifiers":["UniProtKB:Q9UTQ5"],"synonyms":[{"name":"Spom972h-DNAJC9","type":"exact"}],"termid":"PR:Q9UTQ5"}


id: GO:1990551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 2-oxoadipate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11013234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial 2-oxoadipate transmembrane transport","termid":"GO:1990551"}


id: PBO:0055776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 12, region 2","termid":"PBO:0055776"}


id: MONDO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening pregnancy-related disorder characterized by tonic-clonic seizures in association with hypertension after the twentieth week of gestation and up to six weeks postpartum and in the absence of other potential causes of seizures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"preeclampsia","termid":"MONDO:0005081"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia","secondary_identifiers":["MEDGEN:4443","ICD10CM:O15","ICD9:642.64","NCIT:C87167","MESH:D004461","UMLS:C0013537","icd11.foundation:1759760659","SCTID:303063000","DOID:13593"],"synonyms":[{"name":"eclampsia in puerperium","type":"exact"},{"name":"eclampsia, postpartum","type":"exact"},{"name":"postpartum eclampsia","type":"exact"}],"termid":"MONDO:0001754","xrefs":{"Monarch":{"xref_id":"0001754"}}}


id: MONDO:0015172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This syndrome is characterized by the association of severe congenital colitis with sensorineural deafness.","definition_xrefs":["Orphanet:103912"],"gene_count":0,"genotype_count":0,"name":"obsolete epithelio-exfoliative colitis-deafness syndrome (obsolete MONDO:0015172)","termid":"MONDO:0015172","xrefs":{"Monarch":{"xref_id":"0015172"}}}


id: PBO:0052009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JNK1/MAPK8 associated membrane protein","termid":"PBO:0052009"}


id: PBO:0077427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 164","termid":"PBO:0077427"}


id: MONDO:0024354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by cytomegalovirus. Most humans are exposed to cytomegalovirus. Healthy individuals do not develop signs and symptoms of infection. Patients with weakened immune system (e.g., AIDS patients, cancer patients who are being treated with chemotherapy, and patients who have received bone marrow or solid organ transplants) develop signs and symptoms of infection. They include cough, shortness of breath, fatigue, malaise, fever, muscle and joint pain, and excessive sweating.","definition_xrefs":["NCIT:C35360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus infection","termid":"MONDO:0005132"},{"relation_name":"is_a","term_name":"viral pneumonia","termid":"MONDO:0006012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus pneumonia","secondary_identifiers":["MEDGEN:124443","SCTID:7678002","UMLS:C0276253"],"synonyms":[{"name":"CMV pneumonia","type":"exact"},{"name":"Cytomegaloviral pneumonia","type":"exact"},{"name":"Cytomegalovirus caused pneumonia","type":"exact"},{"name":"Cytomegalovirus pneumonia","type":"exact"},{"name":"cytomegalovirus pneumonia","type":"exact"}],"termid":"MONDO:0024354","xrefs":{"Monarch":{"xref_id":"0024354"}}}


id: PBO:0080734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWOX antisense RNA 1","termid":"PBO:0080734"}


id: GO:0015655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alanine(out) + Na+(out) = alanine(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"alanine:sodium symporter activity","secondary_identifiers":["GO:0044670","MetaCyc:TRANS-RXN-125","RHEA:29283"],"synonyms":[{"name":"sodium:alanine symporter activity","type":"exact"}],"termid":"GO:0015655"}


id: MONDO:1012231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary adenomatosis, non-human animal","termid":"MONDO:1011927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, dog","secondary_identifiers":["OMIA:000840-9615"],"termid":"MONDO:1012231","xrefs":{"Monarch":{"xref_id":"1012231"}}}


id: GO:0060341
data:
  {"annotated_genes":["SJAG_03602","SJAG_01166","SJAG_01373","SJAG_03970","SJAG_04343","SJAG_03048","SJAG_02392","SJAG_01245","SJAG_04464","SJAG_03453","SJAG_04597","SJAG_04312","SJAG_02592","SJAG_02645","SJAG_01084","SJAG_01311","SJAG_01805","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[105358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[90429,95348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[93889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[114069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[95349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[93894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[99957,101377,93284,110594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[93852,101912,90315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[97936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[87347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[78407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[87351,91496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[107513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular localisation","type":"exact"}],"termid":"GO:0060341","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0060628":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1905391":null,"GO:2001135":null}}


id: PBO:0057344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 532","termid":"PBO:0057344"}


id: GO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the retinal pigment epithelium over time, from its initial formation to the mature structure. The retinal pigment epithelium is the melanin-containing layer of cells between the retina and the choroid that absorbs scattered and reflected light and removes waste products produced by the photoreceptor cells.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal pigment epithelium development","synonyms":[{"name":"RPE development","type":"related"}],"termid":"GO:0003406"}


id: GO:0019467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ornithine by decarboxylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-ornithine catabolic process, by decarboxylation","secondary_identifiers":["MetaCyc:ORNDEG-PWY"],"synonyms":[{"name":"ornithine breakdown, by decarboxylation","type":"exact"},{"name":"ornithine degradation, by decarboxylation","type":"exact"}],"termid":"GO:0019467"}


id: GO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye cone cell, a cone-shaped cell, that focuses light in a compound eye.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell differentiation","secondary_identifiers":["GO:0042674"],"termid":"GO:0042675"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: GO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"negatively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell autonomous cell death","synonyms":[{"name":"down regulation of activated T cell autonomous cell death","type":"exact"},{"name":"down-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"downregulation of activated T cell autonomous cell death","type":"exact"},{"name":"inhibition of activated T cell autonomous cell death","type":"narrow"},{"name":"negative regulation of ACAD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070240"}


id: PBO:0077509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 229A","termid":"PBO:0077509"}


id: PBO:0085443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication","termid":"PBO:0085443"}


id: PBO:0067397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 503, pseudogene","termid":"PBO:0067397"}


id: MONDO:0012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 6","secondary_identifiers":["MEDGEN:324472","UMLS:C1836271","OMIM:609378"],"synonyms":[{"name":"AUTS6","type":"exact"},{"name":"autism susceptibility 6","type":"exact"},{"name":"autism, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012261","xrefs":{"Monarch":{"xref_id":"0012261"}}}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: PBO:0110331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 7","termid":"PBO:0110331"}


id: PBO:0088972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30","termid":"PBO:0088972"}


id: GO:0102071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-epoxy-18-hydroxystearate + H2O = 9,10,18-trihydroxystearate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-epoxy-18-hydroxystearate hydrolase activity (obsolete GO:0102071)","termid":"GO:0102071"}


id: PBO:0085399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, component of eisosomes; long-lived protein that remains stable in eisosomes of mother cells while other eisosome proteins, Pil1p and Lsp1p, turn over; may function to anchor the eisosome in place; sporulation and plasma membrane sphingolipid content are altered in mutants; localizes to furrow-like invaginations (MCC patches)","termid":"PBO:0085399"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["PMID:12828635","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: MONDO:0016965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 15q duplication is a chromosome abnormality that occurs when an extra (duplicate) copy of the genetic material located on the long arm (q) of chromosome 15 is present in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the duplication and which genes are involved. Common features shared by many people with this duplication include developmental delay; intellectual disability; hypotonia (low muscle tone); seizures ; high and/or cleft palate (roof of the mouth); scoliosis ; slow growth; communication difficulties; behavioral problems; and distinctive facial features. Most cases are not inherited, although affected people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 15","secondary_identifiers":["GARD:5314","Orphanet:262950","MEDGEN:167076","MESH:C538040","UMLS:C0795858"],"synonyms":[{"name":"15q duplication","type":"related"},{"name":"15q trisomy","type":"related"},{"name":"Duplication 15q","type":"related"},{"name":"chromosome 15q duplication","type":"related"},{"name":"partial duplication of chromosome 15q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 15","type":"exact"},{"name":"partial trisomy 15q","type":"related"},{"name":"partial trisomy of chromosome 15q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 15","type":"exact"},{"name":"trisomy 15q","type":"related"}],"termid":"MONDO:0016965","xrefs":{"Monarch":{"xref_id":"0016965"}}}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: MONDO:0015727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 15 is a rare chromosomal anomaly syndrome principally characterized by intrauterine growth restriction, congenital cardiac anomalies (incl. ventricular and atrial septal defects, patent ductus arteriosus) and craniofacial dysmorphism (incl. hypertelorism, downslanting palpebral fissures, wide nasal bridge). Patients also present brain (e.g. hypoplastic cerebellum, ventricular asymmetry), renal (e.g. small dysplastic kidneys), and/or genital (undescended testis, small penis, hypoplastic labia majora) anomalies. Digital and skin pigmentation abnormalities have also been reported.","definition_xrefs":["Orphanet:1706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 15","secondary_identifiers":["UMLS:C2931707","SCTID:764619001","MEDGEN:419475","MESH:C538037","GARD:5313"],"synonyms":[{"name":"Mosaic trisomy chromosome 15","type":"exact"},{"name":"Mosaic trisomy type 15","type":"exact"},{"name":"chromosome 15, trisomy mosaicism","type":"related"},{"name":"trisomy 15 mosaicism","type":"exact"}],"termid":"MONDO:0015727","xrefs":{"Monarch":{"xref_id":"0015727"}}}


id: MONDO:1010508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral amyloid angiopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, non-human animal","termid":"MONDO:1010028"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral amyloid angiopathy, dog","secondary_identifiers":["OMIA:002138-9615"],"termid":"MONDO:1010508","xrefs":{"Monarch":{"xref_id":"1010508"}}}


id: GO:0030071
data:
  {"annotated_genes":["SJAG_03126","SJAG_04999","SJAG_01837","SJAG_04884","SJAG_01082","SJAG_03353","SJAG_04968","SJAG_04573","SJAG_01297","SJAG_01805","SJAG_04259","SJAG_02169","SJAG_00666","SJAG_00883","SJAG_04126","SJAG_03048","SJAG_04699","SJAG_03681","SJAG_01330","SJAG_01679","SJAG_02336","SJAG_02380","SJAG_02498","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115502,106784,90188,99099,111544,103422,113375,107814,113868],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[109478,105869,98941,101323,114098,115159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[93677],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116280],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97204,101632,110957,101908,114367,93282,99657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030071","terms_by_termid":{"GO:0007094":null,"GO:0045842":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0082309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic-type endopeptidase; involved in the cleavage of long-chain polyubiquitinated substrates; role in proteasome-independent, ubiquitin (Ub)-dependent proteolysis and DNA-protein crosslink repair; Ub-shuttle receptor for HO and Ufo1p; DNA damage-inducible v-SNARE binding protein and negative regulator of constitutive exocytosis; possible role in the S-phase checkpoint; UBL-UBA family member containing Ub-like (UBL), helical, Ub-associated (UBA) and retroviral-like proteinase (RVP) domains","termid":"PBO:0082309"}


id: GO:0106094
data:
  {"annotated_genes":["SJAG_04558","SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[96220,102344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links thereby links the nuclear lumen to cytoplasmic microtubules.","definition_xrefs":["GOC:vw","PMID:19225124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane protein complex","termid":"GO:0106083"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106094","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["PMID:16849602","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: MONDO:0012418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 12p13.2-p11.23.","definition_xrefs":["PMID:16650082","DOID:0110514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 62","secondary_identifiers":["OMIM:610143","MESH:C565719","UMLS:C1857820","GARD:22618","MEDGEN:387916"],"synonyms":[{"name":"DFNB62","type":"narrow"},{"name":"autosomal recessive deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 62","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 62","type":"narrow"},{"name":"deafness, autosomal recessive 62","type":"narrow"}],"termid":"MONDO:0012418","xrefs":{"Monarch":{"xref_id":"0012418"}}}


id: GO:0099014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule organization","termid":"GO:0061109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal dense core vesicle organization","termid":"GO:0099014"}


id: PBO:0003812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop8 (predicted)","termid":"PBO:0003812"}


id: GO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds within a sterol regulatory element binding protein (SREBP). SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["PMID:12923525","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein protease activity (obsolete GO:0017093)","synonyms":[{"name":"SREBP protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein protease activity","type":"exact"}],"termid":"GO:0017093"}


id: FYPO:0004427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of the ribosomal small subunit protein S6 begins later than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:24247430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"delayed onset of ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","synonyms":[{"name":"delayed onset of dephosphorylation of ribosomal S6 during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of ribosomal S6 dephosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004427"}


id: MONDO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited digestive cancer-predisposing syndrome (obsolete MONDO:0018538)","secondary_identifiers":["Orphanet:425003"],"termid":"MONDO:0018538","xrefs":{"Monarch":{"xref_id":"0018538"}}}


id: MONDO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialuria is an extremely rare metabolic disorder described in fewer than 10 patients to date and characterized by variable signs and symptoms, mostly in infancy, including transient failure to thrive, slightly prolonged neonatal jaundice, equivocal or mild hepatomegaly, microcytic anemia, frequent upper respiratory infections, gastroenteritis, dehydration and flat and coarse facies. Learning difficulties and seizures may occur in childhood.","definition_xrefs":["Orphanet:3166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sialic acid metabolism","termid":"MONDO:0017736"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"sialuria","secondary_identifiers":["OMIM:269921","icd11.foundation:154329034","MEDGEN:137980","MedDRA:10067529","GARD:4865","SCTID:238051008","ICD9:796.4","DOID:3659","UMLS:C0342853"],"synonyms":[{"name":"sialuria","type":"exact"},{"name":"sialuria, French type","type":"exact"}],"termid":"MONDO:0010028","xrefs":{"Monarch":{"xref_id":"0010028"}}}


id: FYPO:0006185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiotic prophase I","termid":"FYPO:0006183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during prophase I","synonyms":[{"name":"decreased protein localisation to nucleus during prophase I","type":"exact"},{"name":"reduced protein localization to nucleus during prophase I","type":"exact"}],"termid":"FYPO:0006185"}


id: MONDO:0020508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation of the neurenteric canal, spinal cord and column (obsolete MONDO:0017085)","termid":"MONDO:0017085"},{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syringomyelia","secondary_identifiers":["GARD:19691","icd11.foundation:257905685","SCTID:371076006","UMLS:C1299627","MEDGEN:721465","Orphanet:99856"],"synonyms":[{"name":"congenital syringomyelia","type":"exact"}],"termid":"MONDO:0020508","xrefs":{"Monarch":{"xref_id":"0020508"}}}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: PBO:0061477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal regeneration related protein","termid":"PBO:0061477"}


id: PBO:0053883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1163","termid":"PBO:0053883"}


id: MONDO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"WHIM syndrome","termid":"MONDO:0023880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHIM syndrome 2","secondary_identifiers":["OMIM:619407","DOID:0060973","MEDGEN:1785594","UMLS:C5543622"],"synonyms":[{"name":"WHIMS2","type":"exact"}],"termid":"MONDO:0030374","xrefs":{"Monarch":{"xref_id":"0030374"}}}


id: PBO:0052285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketodihydrosphingosine reductase","termid":"PBO:0052285"}


id: PBO:0068760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 5, pseudogene","termid":"PBO:0068760"}


id: PBO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 23","termid":"PBO:0070282"}


id: PBO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl cyclase-associated protein Cap1","termid":"PBO:0005129"}


id: PR:000050599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, PR:000026291.","definition_xrefs":["PMID:29899453","PomBase:VW","PRO:DAN","PMID:7957097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase sid2 (Schizosaccharomyces pombe)","termid":"PR:000050482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis2/UnPhos(T316)","pombase_gene_id":"SPBC776.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein phosphatase PP1-1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dis2/UnPhos:1","type":"exact"},{"name":"UniProtKB:P13681, Thr-316, PR:000026291","type":"narrow"},{"name":"dis2/UnPhos(T316)","type":"exact"}],"termid":"PR:000050599"}


id: GO:1905769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:18812185","GOC:BHF","GOC:BHF_telomere","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of double-stranded telomeric DNA binding (obsolete GO:1905769)","synonyms":[{"name":"activation of double-stranded telomeric DNA binding","type":"narrow"},{"name":"up regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"up-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"upregulation of double-stranded telomeric DNA binding","type":"exact"}],"termid":"GO:1905769"}


id: FYECO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cyanide-p-trifluoromethoxyphenylhydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FCCP","secondary_identifiers":["PMID:37590302"],"synonyms":[{"name":"carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"FYECO:0000436"}


id: MONDO:8000024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune lymphoproliferative syndrome in which the cause of the disease is a mutation in the PRKCD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD","secondary_identifiers":["DOID:0110119","GARD:15987","MEDGEN:816258","UMLS:C3809928","OMIM:615559"],"termid":"MONDO:8000024","xrefs":{"Monarch":{"xref_id":"8000024"}}}


id: PBO:0068984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 228, pseudogene","termid":"PBO:0068984"}


id: GO:0099144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of synaptic membrane (obsolete GO:0099144)","termid":"GO:0099144"}


id: PBO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 28","termid":"PBO:0039508"}


id: PBO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck1","termid":"PBO:0001534"}


id: GO:0102896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (10E,12Z,15Z)-9-hydroperoxyoctadeca-10,12,15-trienoate = colnelenate + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete colnelenate synthase activity (obsolete GO:0102896)","termid":"GO:0102896"}


id: GO:1905175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GO_REF:0000058","GOC:BHF","PMID:19088079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"down regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"inhibition of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905175"}


id: MONDO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked recessive intellectual disability-macrocephaly-ciliary dysfunction syndrome (obsolete MONDO:0019389)","secondary_identifiers":["Orphanet:83648"],"termid":"MONDO:0019389","xrefs":{"Monarch":{"xref_id":"0019389"}}}


id: GO:2000758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein acetylation","termid":"GO:1901985"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"positively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"}


id: GO:1905326
data:
  {"annotated_genes":["SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113380],"is_not":false,"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["GO_REF:0000058","PMID:26483559","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905325"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiosis I spindle assembly checkpoint","type":"narrow"},{"name":"up regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"up-regulation of meiosis I spindle assembly checkpoint","type":"exact"},{"name":"upregulation of meiosis I spindle assembly checkpoint","type":"exact"}],"termid":"GO:1905326","terms_by_termid":{"GO:1905326":null}}


id: GO:0052414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont glucan (obsolete GO:0052414)","termid":"GO:0052414"}


id: MONDO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to distinguish visual shapes.","definition_xrefs":["DOID:0060134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apperceptive agnosia","termid":"MONDO:0000664","xrefs":{"Monarch":{"xref_id":"0000664"}}}


id: GO:0007323
data:
  {"annotated_genes":["SJAG_00730","SJAG_04398","SJAG_05016","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73028,89029],"is_not":false,"summary":null,"term":"GO:0007323"},{"annotations":[92656,87288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071432"}]},"cv_name":"biological_process","definition":"The generation of a mature, active peptide pheromone via processes unique to its processing and modification. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_04398":null,"SJAG_04923":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peptide pheromone maturation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007326","GO:0046613","GO:0007324"],"synonyms":[{"name":"pheromone processing","type":"exact"}],"termid":"GO:0007323","terms_by_termid":{"GO:0007323":null,"GO:0071432":null}}


id: PBO:0111534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flocculin-like protein","termid":"PBO:0111534"}


id: PBO:0041996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 42","termid":"PBO:0041996"}


id: PBO:0027147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_farnesyltranstransferase_activity","termid":"PBO:0027147"}


id: PR:000036298
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1F7.05","synonyms":[{"name":"Spom-cdc22","type":"exact"}],"termid":"PR:000036298"}


id: FYPO:0000747
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118937,118938,118939,119036],"is_not":false,"summary":null,"term":"FYPO:0000747"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize adenine, and therefore requires adenine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":3,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for adenine","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081"],"single_locus_genotype_uniquenames":["ade6delta","ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"adenine auxotrophy","type":"exact"},{"name":"growth auxotrophic for adenine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for adenine during vegetative growth","type":"exact"}],"termid":"FYPO:0000747","terms_by_termid":{"FYPO:0000747":null}}


id: PBO:0089005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Faf1","termid":"PBO:0089005"}


id: GO:0050254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + rhodopsin = ADP + phosphorhodopsin.","definition_xrefs":["PMID:14654303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor kinase activity","termid":"GO:0004703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016301","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"rhodopsin kinase activity","secondary_identifiers":["Reactome:R-HSA-2581474","RHEA:23356","EC:2.7.11.14","MetaCyc:2.7.11.14-RXN"],"synonyms":[{"name":"GPCR kinase 1 activity","type":"narrow"},{"name":"cone opsin kinase activity","type":"narrow"},{"name":"opsin kinase (phosphorylating) activity","type":"related"},{"name":"opsin kinase activity","type":"related"},{"name":"rhodopsin kinase (phosphorylating) activity","type":"exact"}],"termid":"GO:0050254"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","PMID:8423010","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: PBO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 1","termid":"PBO:0050915"}


id: GO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal DNA.","definition_xrefs":["PMID:11898023"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation (obsolete GO:0010216)","synonyms":[{"name":"maintenance of DNA methylation","type":"broad"}],"termid":"GO:0010216"}


id: PBO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4A","termid":"PBO:0061881"}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["PMID:25964650","PMID:26523947","GO:0020022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: GO:0030459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Fungi) (obsolete GO:0030459)","synonyms":[{"name":"inactivation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030459"}


id: MONDO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A orthopoxvirus that causes a milder clinical syndrome than smallpox.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smallpox","termid":"MONDO:0004651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variola minor infection","secondary_identifiers":["SCTID:72294005","ICD9:050.1","NCIT:C34365","UMLS:C0001906","MEDGEN:1393","DOID:9153"],"synonyms":[{"name":"Variola minor","type":"exact"},{"name":"alastrim","type":"exact"},{"name":"cottonpox","type":"exact"},{"name":"milkpox","type":"exact"},{"name":"whitepox","type":"exact"}],"termid":"MONDO:0004720","xrefs":{"Monarch":{"xref_id":"0004720"}}}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: PBO:0076392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor associated calcium signal transducer 2","termid":"PBO:0076392"}


id: GO:0052861
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62686,71042],"is_not":false,"summary":null,"term":"GO:0052861"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->3)- or (1->4)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolyzed is itself substituted at C-3. Substrates include laminarin, lichenin and cereal D-glucans.","definition_xrefs":["EC:3.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"endo-1,3(4)-beta-glucanase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:3.2.1.6-RXN"],"synonyms":[{"name":"1,3-(1,3)-beta-D-glucan 3-glucanohydrolase activity","type":"narrow"},{"name":"glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group","type":"narrow"},{"name":"glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group","type":"narrow"},{"name":"laminaranase activity","type":"related"},{"name":"laminarinase activity","type":"related"}],"termid":"GO:0052861","terms_by_termid":{"GO:0052861":null}}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: SO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between two regions of an immunoglobulin/T-cell receptor gene that may be rearranged by recombinase.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_spacer","synonyms":[{"name":"vertebrate immune system gene recombination spacer","type":"exact"}],"termid":"SO:0000563"}


id: PBO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted), possible alternative UTR","termid":"PBO:0000149"}


id: PBO:0066174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase","termid":"PBO:0066174"}


id: PBO:0004487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php5","termid":"PBO:0004487"}


id: PBO:0053552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 559","termid":"PBO:0053552"}


id: GO:0017165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides Asp-Xaa; does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides.","definition_xrefs":["EC:3.4.13.21"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidase E activity (obsolete GO:0017165)","synonyms":[{"name":"PepE gene product (Salmonella typhimurium) activity","type":"narrow"},{"name":"alpha-aspartyl dipeptidase activity","type":"exact"},{"name":"aspartyl dipeptidase activity","type":"related"},{"name":"dipeptidase E activity","type":"exact"},{"name":"peptidase E activity","type":"broad"}],"termid":"GO:0017165"}


id: MONDO:0054833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-tooth disease, axonal, type 2DD","secondary_identifiers":["UMLS:C4747974","DOID:0111558","MEDGEN:1648475","OMIM:618036","GARD:17959","Orphanet:521414"],"synonyms":[{"name":"CMT2DD","type":"exact"}],"termid":"MONDO:0054833","xrefs":{"Monarch":{"xref_id":"0054833"}}}


id: PBO:0042745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPS-CORT readthrough","termid":"PBO:0042745"}


id: PBO:0045875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 8","termid":"PBO:0045875"}


id: MONDO:0008684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolf-Hirschhorn syndrome (WHS) is a developmental disorder characterized by typical craniofacial features, prenatal and postnatal growth impairment, intellectual disability, severe delayed psychomotor development, seizures, and hypotonia.","definition_xrefs":["Orphanet:280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"chromosome 4 short arm deletion","termid":"MONDO:0022762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome","secondary_identifiers":["UMLS:C1956097","DOID:0050460","OMIM:194190","icd11.foundation:1337401724","GARD:7896","NANDO:2200962","NORD:1859","MESH:D054877","SCTID:718226002","MedDRA:10050361","DECIPHER:1","ICD10CM:Q93.3","MEDGEN:408255","NANDO:1200683","NCIT:C35528"],"synonyms":[{"name":"4p deletion syndrome","type":"exact"},{"name":"4p syndrome","type":"related"},{"name":"4p- syndrome","type":"exact"},{"name":"Pitt syndrome","type":"exact"},{"name":"Pitt-Rogers-Danks syndrome","type":"exact"},{"name":"WHS","type":"related"},{"name":"Wittwer syndrome","type":"exact"},{"name":"Wolf syndrome","type":"related"},{"name":"Wolf-Hirschhorn syndrome","type":"exact"},{"name":"Wolf-Hirschhorn syndrome, Isolated cases","type":"exact"},{"name":"chromosome 4P16.3 deletion syndrome","type":"related"},{"name":"chromosome 4p syndrome","type":"related"},{"name":"chromosome 4p16.3 deletion syndrome","type":"exact"},{"name":"distal deletion 4p","type":"exact"},{"name":"distal monosomy 4p","type":"exact"},{"name":"microcephaly, IUGR, hypertelorism, ptosis, iris coloboma, hooked nose, external ear dysplasia, psychomotor retardation","type":"related"},{"name":"telomeric deletion 4p","type":"exact"}],"termid":"MONDO:0008684","xrefs":{"Monarch":{"xref_id":"0008684"}}}


id: GO:0005181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycopeptide hormone (obsolete GO:0005181)","synonyms":[{"name":"glycopeptide hormone","type":"exact"}],"termid":"GO:0005181"}


id: GO:1901208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart looping","synonyms":[{"name":"down regulation of cardiac looping","type":"exact"},{"name":"down regulation of heart looping","type":"exact"},{"name":"down-regulation of cardiac looping","type":"exact"},{"name":"down-regulation of heart looping","type":"exact"},{"name":"downregulation of cardiac looping","type":"exact"},{"name":"downregulation of heart looping","type":"exact"},{"name":"inhibition of cardiac looping","type":"exact"},{"name":"inhibition of heart looping","type":"narrow"},{"name":"negative regulation of cardiac looping","type":"exact"}],"termid":"GO:1901208"}


id: PBO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in actin patch formation; null mutant displays a decreased number of actin cortical patches, increased coat patches, altered patch formation dynamics, and defects in endocytic internalization; interacts with GID complex components and computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0086039"}


id: PBO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged DNA binding protein Ddb1","termid":"PBO:0001289"}


id: PBO:0002760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2","termid":"PBO:0002760"}


id: PBO:0076242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 3","termid":"PBO:0076242"}


id: GO:0016655
data:
  {"annotated_genes":["SJAG_01539","SJAG_02697","SJAG_03476","SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003955"},{"annotations":[112447,96226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[76152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01539":null,"SJAG_02697":null,"SJAG_03476":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.6.5.-"],"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor","type":"related"}],"termid":"GO:0016655","terms_by_termid":{"GO:0003955":null,"GO:0003960":null,"GO:0050136":null}}


id: PBO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_small_cell","termid":"PBO:0027676"}


id: GO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric complex composed of the subunits RecF, RecO and RecR. Mediates the loading of RecA protein specifically onto SSB-coated gapped DNA during DNA repair.","definition_xrefs":["PMID:12769856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RecFOR complex","termid":"GO:0043850"}


id: MONDO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly aggressive malignant neoplasm arising from the ovary. Morphologically, it is a high grade tumor, composed of carcinomatous and sarcomatous elements.","definition_xrefs":["NCIT:C9192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"ovarian endometrial cancer","termid":"MONDO:0003812"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinosarcoma","secondary_identifiers":["MONDO:0016247","EFO:1000412","GARD:7296","MEDGEN:140705","DOID:6170","SCTID:702368000","Orphanet:213512","UMLS:C0392998","ONCOTREE:OCS"],"synonyms":[{"name":"MMMT of the ovary","type":"exact"},{"name":"carcinosarcoma of ovary","type":"exact"},{"name":"carcinosarcoma of the ovary","type":"exact"},{"name":"malignant mixed Müllerian tumor of the ovary","type":"related"},{"name":"malignant mixed Müllerian tumour of the ovary","type":"related"},{"name":"malignant mixed mesodermal Mullerian neoplasm of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian neoplasm of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumor of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumor of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumour of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumour of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian neoplasm of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian neoplasm of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumor of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumor of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumour of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumour of the ovary","type":"exact"},{"name":"ovarian MMMT","type":"exact"},{"name":"ovarian carcinosarcoma","type":"exact"},{"name":"ovarian carcinosarcoma/malignant mixed mesodermal tumor","type":"related"},{"name":"ovarian carcinosarcoma/malignant mixed mesodermal tumour","type":"related"},{"name":"ovarian malignant mesodermal (Mullerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (Mullerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mesodermal (Müllerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (Müllerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mesodermal (mullerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (mullerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mixed Mullerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed Mullerian tumor","type":"exact"},{"name":"ovarian malignant mixed Mullerian tumour","type":"exact"},{"name":"ovarian malignant mixed Müllerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed Müllerian tumor","type":"exact"},{"name":"ovarian malignant mixed Müllerian tumour","type":"exact"},{"name":"ovarian malignant mixed epithelial mesenchymal tumor","type":"exact"},{"name":"ovarian malignant mixed epithelial mesenchymal tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian tumour","type":"exact"},{"name":"ovary carcinosarcoma","type":"exact"}],"termid":"MONDO:0003792","xrefs":{"Monarch":{"xref_id":"0003792"}}}


id: PBO:0044615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 17","termid":"PBO:0044615"}


id: PBO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0002465"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: PBO:0043511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 6","termid":"PBO:0043511"}


id: PBO:0005557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf13","termid":"PBO:0005557"}


id: PBO:0088010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; shuttles between cytosol and nucleus; mediates delivery of misfolded proteins into the nucleus for degradation; involved in proteasomal degradation of misfolded cytosolic proteins; protein abundance increases in response to DNA replication stress; polyQ aggregates sequester Sis1p and interfere with clearance of misfolded proteins; similar to bacterial DnaJ proteins and mammalian DnaJB1","termid":"PBO:0088010"}


id: PBO:0090954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rsd1","termid":"PBO:0090954"}


id: GO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"arginine metabolic process","termid":"GO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of arginine metabolic process","synonyms":[{"name":"regulation of arginine metabolism","type":"exact"}],"termid":"GO:0000821"}


id: PBO:0052539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 12","termid":"PBO:0052539"}


id: GO:0033255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity and links histone acetylation to the assembly of transcriptionally silent chromatin. In vitro, the complex acetylates lysine 16 of histone H4 and lysine 14 of histone H3, although the latter may not be relevant in vivo. The complex contains a catalytic subunit and at least two other subunits; in Saccharomyces, the catalytic subunit is Sas2p and additional subunits are Sas4p and Sas5p.","definition_xrefs":["PMID:15788653","PMID:11731480","PMID:12626510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SAS acetyltransferase complex","synonyms":[{"name":"SAS-I complex","type":"exact"}],"termid":"GO:0033255"}


id: MONDO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, early-onset, with choreoathetoid movements and microcytic anemia","secondary_identifiers":["MEDGEN:1676579","OMIM:618451","UMLS:C5193104"],"synonyms":[{"name":"NDCAMA","type":"exact"}],"termid":"MONDO:0032758","xrefs":{"Monarch":{"xref_id":"0032758"}}}


id: MONDO:0026762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Wieacker-Wolff syndrome (spectrum)","termid":"MONDO:0025445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wieacker-Wolff syndrome, female-restricted","secondary_identifiers":["UMLS:C5393303","OMIM:301041","MEDGEN:1715791"],"synonyms":[{"name":"WIEACKER-WOLFF SYNDROME, FEMALE-RESTRICTED","type":"related"},{"name":"WRWFFR","type":"related"},{"name":"Wieacker-Wolff syndrome, female-restricted, X-linked dominant","type":"exact"}],"termid":"MONDO:0026762","xrefs":{"Monarch":{"xref_id":"0026762"}}}


id: PBO:0068602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 53, pseudogene","termid":"PBO:0068602"}


id: GO:0052654
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110012],"is_not":false,"summary":null,"term":"GO:0052654"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamatic acid.","definition_xrefs":["RHEA:18321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"L-leucine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01090","MetaCyc:BRANCHED-CHAINAMINOTRANSFERLEU-RXN"],"synonyms":[{"name":"L-leucine aminotransferase activity","type":"exact"}],"termid":"GO:0052654","terms_by_termid":{"GO:0052654":null}}


id: PBO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member A","termid":"PBO:0043272"}


id: PBO:0087731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Shu complex (aka PCSS complex); Shu complex also includes Psy3, Shu1, Shu2, and promotes error-free DNA repair; Shu complex mediates inhibition of Srs2p anti-recombinase function; promotes formation of Rad51p filaments; Psy3p and Csm2p contain similar DNA-binding regions which work together to form a single DNA binding site; required for accurate chromosome segregation during meiosis","termid":"PBO:0087731"}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: PBO:0005046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human BRP44L ortholog","termid":"PBO:0005046"}


id: MONDO:0011567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 6q12-q16.","definition_xrefs":["DOID:0110437","PMID:11085912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1K","secondary_identifiers":["GARD:15382","UMLS:C1854159","MEDGEN:381354","MESH:C565320","OMIM:605582"],"synonyms":[{"name":"CMD1K","type":"exact"},{"name":"cardiomyopathy, dilated, 1K","type":"related"},{"name":"dilated cardiomyopathy type 1K","type":"exact"}],"termid":"MONDO:0011567","xrefs":{"Monarch":{"xref_id":"0011567"}}}


id: PBO:0076006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM activating enhancer","termid":"PBO:0076006"}


id: GO:0102106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloylacetyl-CoA + feruloyl-CoA(4-) + H2O = curcumin + 2 coenzyme A(4-) + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"curcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-11226","RHEA:34823"],"termid":"GO:0102106"}


id: MONDO:0006337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by the growth of endometrial tissue in the ovaries. It results in the development of blood filled ovarian cysts (chocolate cysts), and creation of scars and adhesions.","definition_xrefs":["NCIT:C27628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometriosis","secondary_identifiers":["SCTID:266589005","ICD10CM:N80.1","DOID:11432","UMLS:C0156344","EFO:1000418","MEDGEN:102350","ICD9:617.1"],"synonyms":[{"name":"endometriosis (disease) of ovary","type":"exact"},{"name":"endometriosis of ovary","type":"exact"},{"name":"ovarian endometriosis","type":"exact"},{"name":"ovary endometriosis (disease)","type":"exact"}],"termid":"MONDO:0006337","xrefs":{"Monarch":{"xref_id":"0006337"}}}


id: PBO:0054429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1825","termid":"PBO:0054429"}


id: MONDO:0006747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease caused by the liberation of exotoxins of clostridium perfringens in the intestines of sheep, goats, cattle, foals, and piglets. Type B enterotoxemia in lambs is lamb dysentery; type C enterotoxemia in mature sheep produces 'struck', and in calves, lambs and piglets it produces hemorrhagic enterotoxemia; type D enterotoxemia in sheep and goats is pulpy-kidney disease or overeating disease.","definition_xrefs":["MESH:D004767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterotoxemia","secondary_identifiers":["EFO:1000922","ICD9:799.89","SCTID:370514003"],"termid":"MONDO:0006747","xrefs":{"Monarch":{"xref_id":"0006747"}}}


id: MONDO:0010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Mabry type","secondary_identifiers":["UMLS:C1839670","MEDGEN:326551","MESH:C564096","OMIM:310000"],"synonyms":[{"name":"muscular dystrophy, Mabry type","type":"exact"}],"termid":"MONDO:0010677","xrefs":{"Monarch":{"xref_id":"0010677"}}}


id: GO:0048452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the petal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal structural organization","secondary_identifiers":["GO:0048420"],"synonyms":[{"name":"petal structural organisation","type":"exact"}],"termid":"GO:0048452"}


id: PBO:0087125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm; CTL1 has a paralog, CET1, that arose from the whole genome duplication","termid":"PBO:0087125"}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: PBO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2, lysosomal","termid":"PBO:0045258"}


id: GO:0042854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"eugenol metabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol metabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol metabolism","type":"exact"},{"name":"eugenic acid metabolic process","type":"exact"},{"name":"eugenic acid metabolism","type":"exact"},{"name":"eugenol metabolism","type":"exact"}],"termid":"GO:0042854"}


id: PBO:0113409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressor of G1 transcription; binds to SCB binding factor (SBF) at SCB target promoters in early G1; WHI5 expression is repressed in M/early G phase; phosphorylation of Whi5p by G1 cyclin (Cln)/Cdc28p relieves repression and promoter binding by Whi5p, drives nuclear export, and contributes to both the determination of critical cell size at START and cell fate; dephosphorylated and re-imported into the nucleus post-START during the starvation response, reversing commitment","termid":"PBO:0113409"}


id: PBO:0017660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator Pga3 (predicted)","termid":"PBO:0017660"}


id: GO:0046667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium.","definition_xrefs":["PMID:12006672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell programmed cell death","termid":"GO:0046666"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}


id: GO:0140882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of zinc ions from a cell, into the extracellular region.","definition_xrefs":["PMID:17355957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"zinc export across plasma membrane","synonyms":[{"name":"zinc ion export from cell","type":"exact"}],"termid":"GO:0140882"}


id: PBO:0085766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; putative serine/threonine kinase; expression is induced during mild heat stress; deletion mutants are hypersensitive to copper sulphate and resistant to sorbate; interacts with an N-terminal fragment of Sst2p","termid":"PBO:0085766"}


id: GO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin F stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin F","termid":"GO:0034696"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin F stimulus","termid":"GO:0071381"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PBO:0091341
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWItching","termid":"PBO:0091341"}


id: PBO:0040756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB","termid":"PBO:0040756"}


id: FYPO:0007858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes one or more rounds of rereplication of the entire genome without forming a mitotic spindle or undergoing cytokinesis.","definition_xrefs":["PMID:20967237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mitotic DNA re-replication in absence of mitotic spindle","synonyms":[{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic DNA re-replication in the absence of normal mitotic spindle assembly and cytokinesis","type":"exact"}],"termid":"FYPO:0007858"}


id: GO:0141171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont effects a change that impairs the structure or function of a host membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28855258","PMID:14688136","PMID:17043230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host membrane","synonyms":[{"name":"symbiont-mediated disruption of host membrane","type":"narrow"}],"termid":"GO:0141171"}


id: GO:0051240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"positively_regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of multicellular organismal process","synonyms":[{"name":"activation of multicellular organismal process","type":"narrow"},{"name":"stimulation of multicellular organismal process","type":"narrow"},{"name":"up regulation of multicellular organismal process","type":"exact"},{"name":"up-regulation of multicellular organismal process","type":"exact"},{"name":"upregulation of multicellular organismal process","type":"exact"}],"termid":"GO:0051240"}


id: GO:2000782
data:
  {"annotated_genes":["SJAG_02536","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116190,107167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000782","terms_by_termid":{"GO:2000784":null}}


id: PBO:0108945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 2","termid":"PBO:0108945"}


id: MONDO:1010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus, non-human animal","secondary_identifiers":["OMIA:000781"],"termid":"MONDO:1010046","xrefs":{"Monarch":{"xref_id":"1010046"}}}


id: GO:0009655
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigment-protein complex primarily associated to PSII in higher plants, green algae and cyanobacteria that directly transfers electrons to the reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, core complex","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIIc subcomplex","type":"narrow"},{"name":"PSII associated light-harvesting complex II, core complex, LHCIId subcomplex","type":"narrow"}],"termid":"GO:0009655"}


id: PBO:0041960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon cancer associated transcript 2","termid":"PBO:0041960"}


id: FYPO:0005060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break resection is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["PomBase:mah","PMID:26130711","GO:1990899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break resection","synonyms":[{"name":"normal meiotic DNA double-strand break resectioning","type":"exact"}],"termid":"FYPO:0005060"}


id: MONDO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, exercise, stress, reflux disease, medications, foods and emotional anxiety.","definition_xrefs":["EFO:0000270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma","secondary_identifiers":["ICD9:493.81","icd11.foundation:1656445230","SCTID:31387002","UMLS:C0004096","MEDGEN:2109","ICD10CM:J45","MESH:D001249","ICD9:493.9","ICD9:493","NCIT:C28397","DOID:2841","HP:0002099"],"synonyms":[{"name":"bronchial hyperreactivity","type":"exact"},{"name":"chronic obstructive asthma","type":"narrow"},{"name":"chronic obstructive asthma with acute exacerbation","type":"narrow"},{"name":"chronic obstructive asthma with status asthmaticus","type":"narrow"},{"name":"exercise induced asthma","type":"narrow"},{"name":"exercise-induced asthma","type":"narrow"}],"termid":"MONDO:0004979","xrefs":{"Monarch":{"xref_id":"0004979"}}}


id: GO:0009015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-succinyl-L-arginine + 2 H2O + 2 H+ = N(2)-succinyl-L-ornithine + CO2 + 2 NH4.","definition_xrefs":["RHEA:19533","EC:3.5.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-succinylarginine dihydrolase activity","secondary_identifiers":["MetaCyc:SUCCARGDIHYDRO-RXN","KEGG_REACTION:R04189"],"synonyms":[{"name":"2-N-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"related"},{"name":"AruB","type":"related"},{"name":"AstB","type":"related"},{"name":"N2-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"exact"},{"name":"N2-succinylarginine dihydrolase activity","type":"exact"},{"name":"SADH","type":"related"},{"name":"arginine succinylhydrolase activity","type":"exact"},{"name":"succinylarginine dihydrolase activity","type":"exact"}],"termid":"GO:0009015"}


id: GO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic interphase chromosome (obsolete GO:0000233)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"exact"}],"termid":"GO:0000233"}


id: PBO:0058106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4321","termid":"PBO:0058106"}


id: PBO:0089401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor complex RNA-binding subunit Pcf11","termid":"PBO:0089401"}


id: PBO:0084988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084988"}


id: MONDO:0017594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"indolent B-cell non-Hodgkin lymphoma","secondary_identifiers":["Orphanet:300842","UMLS:C5419078","GARD:21244","NCIT:C171299","MEDGEN:1741600"],"synonyms":[{"name":"B cell lymphoma, indolent","type":"related"},{"name":"indolent B cell lymphoma","type":"related"},{"name":"indolent B-cell NHL","type":"exact"}],"termid":"MONDO:0017594","xrefs":{"Monarch":{"xref_id":"0017594"}}}


id: GO:0043591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structures that lie outside the inner membrane and surround the entire endospore; consists of a peptidoglycan-containing inner layer (the endospore cortex) surrounded by a multilayered proteinaceous coat. An exosporium may be present as an extreme outer layer.","definition_xrefs":["PMID:15035041","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore external encapsulating structure","secondary_identifiers":["GO:0055030"],"synonyms":[{"name":"endospore wall","type":"exact"},{"name":"peptidoglycan-based spore wall","type":"exact"},{"name":"spore wall","type":"broad"}],"termid":"GO:0043591"}


id: GO:1900866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glycolate transport","termid":"GO:1900866"}


id: PBO:0116581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR89 family, implicated in ribosome biogenesis","termid":"PBO:0116581"}


id: PBO:0119273
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP4","termid":"PBO:0119273"}


id: GO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + UDP-D-galactose = 3-[alpha-D-galactosyl-(1->6)-beta-D-galactosyl]-1,2-diacyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.241","RHEA:10520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"digalactosyldiacylglycerol synthase activity","secondary_identifiers":["KEGG_REACTION:R04469","Wikipedia:Digalactosyldiacylglycerol_synthase","MetaCyc:RXN-1225"],"synonyms":[{"name":"DGD1","type":"narrow"},{"name":"DGD2","type":"narrow"},{"name":"DGDG synthase activity","type":"broad"},{"name":"UDP-galactose-dependent DGDG synthase activity","type":"related"},{"name":"UDP-galactose-dependent digalactosyldiacylglycerol synthase activity","type":"related"},{"name":"UDP-galactose:3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol 6-alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:MGDG galactosyltransferase activity","type":"exact"}],"termid":"GO:0046481"}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: GO:0032231
data:
  {"annotated_genes":["SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107168],"is_not":false,"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin cable assembly","type":"exact"},{"name":"regulation of actin filament bundle formation","type":"related"}],"termid":"GO:0032231","terms_by_termid":{"GO:0032231":null}}


id: MONDO:0017263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited ichthyosis syndromic form (obsolete MONDO:0017263)","secondary_identifiers":["icd11.foundation:488102959","Orphanet:281085"],"synonyms":[{"name":"syndrome associated with inherited ichthyosis","type":"exact"},{"name":"syndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017263","xrefs":{"Monarch":{"xref_id":"0017263"}}}


id: PBO:0043072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 1 subunit","termid":"PBO:0043072"}


id: PBO:0013006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unrecorded","termid":"PBO:0013006"}


id: PBO:0088099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus","termid":"PBO:0088099"}


id: MONDO:0012081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 15q11-q13 microduplication (dup15q11-q13) syndrome is characterized by neurobehavioral disorders, hypotonia, cognitive deficit, language delay and seizures. Prevalence is unknown.","definition_xrefs":["Orphanet:238446"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 15","termid":"MONDO:0016965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15q11q13 microduplication syndrome","secondary_identifiers":["MEDGEN:390767","NCIT:C126692","OMIM:608636","SCTID:719427001","GARD:17172","UMLS:C2675336"],"synonyms":[{"name":"15q11-q13 duplication syndrome","type":"exact"},{"name":"15q11-q13 microduplication syndrome","type":"exact"},{"name":"15q11q13 duplication syndrome","type":"exact"},{"name":"Dup15q","type":"exact"},{"name":"Duplication 15Q11-q13 syndrome","type":"related"},{"name":"autism susceptibility 4","type":"exact"},{"name":"autism, susceptibility to, 4","type":"related"},{"name":"chromosome 15Q11.2 Duplication syndrome","type":"related"},{"name":"chromosome 15q11-q13 DUPLICATION syndrome","type":"related"},{"name":"dup(15)(q11q13)","type":"exact"},{"name":"trisomy 15q11-q13","type":"exact"},{"name":"trisomy 15q11q13","type":"exact"}],"termid":"MONDO:0012081","xrefs":{"Monarch":{"xref_id":"0012081"}}}


id: PBO:0061865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OMA1 zinc metallopeptidase","termid":"PBO:0061865"}


id: PBO:0075008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-19","termid":"PBO:0075008"}


id: MONDO:0100572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome in which the cause of the disease is a pathogenic gain-of-function variants in the MTOR gene. The variants can be germline or somatic.","definition_xrefs":["PMID:27860216","PMID:33833411","PMID:35163267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR-related overgrowth spectrum","termid":"MONDO:0100572","xrefs":{"Monarch":{"xref_id":"0100572"}}}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: PBO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_at_point","termid":"PBO:0034110"}


id: PBO:0027282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intragenic_meiotic_recombination","termid":"PBO:0027282"}


id: MONDO:0037250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the testis during childhood.","definition_xrefs":["NCIT:C5053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood testicular neoplasm","secondary_identifiers":["MEDGEN:272472","UMLS:C1333010"],"synonyms":[{"name":"childhood neoplasm of testis","type":"exact"},{"name":"childhood neoplasm of the testis","type":"exact"},{"name":"childhood testicular neoplasm","type":"exact"},{"name":"neoplasm of testis of childhood","type":"exact"},{"name":"paediatric neoplasm of testis","type":"exact"},{"name":"paediatric neoplasm of the testis","type":"exact"},{"name":"paediatric testicular neoplasm","type":"exact"},{"name":"pediatric neoplasm of testis","type":"exact"},{"name":"pediatric neoplasm of the testis","type":"exact"},{"name":"pediatric testicular neoplasm","type":"exact"},{"name":"testicular tumor, childhood","type":"exact"}],"termid":"MONDO:0037250","xrefs":{"Monarch":{"xref_id":"0037250"}}}


id: GO:1903023
data:
  {"annotated_genes":["SJAG_02736","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116538],"is_not":false,"summary":null,"term":"GO:1903023"},{"annotations":[90193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["PMID:11405625","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_02736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of FSM assembly","type":"exact"},{"name":"regulation of FSM biosynthesis","type":"exact"},{"name":"regulation of FSM formation","type":"exact"},{"name":"regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"regulation of forespore membrane biosynthesis","type":"exact"},{"name":"regulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903023","terms_by_termid":{"GO:1903023":null,"GO:1903024":null}}


id: FYPO:0009029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on arginine nitrogen source","synonyms":[{"name":"increased growth on arginine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0009029"}


id: PBO:0026918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rRNA_modification","termid":"PBO:0026918"}


id: PBO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase Exg3","termid":"PBO:0004286"}


id: GO:0090206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of cholesterol metabolic process","termid":"GO:0090181"},{"relation_name":"negatively_regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of cholesterol metabolic process","termid":"GO:0090206"}


id: PBO:0065025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 4","termid":"PBO:0065025"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: PBO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 4","termid":"PBO:0060858"}


id: PBO:0077972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 24-1","termid":"PBO:0077972"}


id: PR:O94572
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dal52 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1773.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.15","synonyms":[{"name":"Spom972h-dal52","type":"exact"}],"termid":"PR:O94572"}


id: PBO:0109603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A5","termid":"PBO:0109603"}


id: MONDO:0012648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of valine metabolism. The prevalence is unknown. Only one symptomatic patient (with anemia, failure to thrive, dilated cardiomyopathy and plasma carnitine deficiency) has been described so far, but several series of patients have been identified through newborn screening programs relying on detection of increased C(4)-carnitine levels by tandem mass spectrometry. The disorder is caused by mutations in the ACAD8 gene (11q25).","definition_xrefs":["Orphanet:79159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"isobutyryl-CoA dehydrogenase deficiency","secondary_identifiers":["MESH:C535541","GARD:10223","NCIT:C129975","UMLS:C1969809","MEDGEN:370754","OMIM:611283"],"synonyms":[{"name":"Acad8 deficiency","type":"related"},{"name":"IBD deficiency","type":"related"},{"name":"acyl-Coa dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"acyl-CoaA dehydrogenase family, member 8, deficiency of","type":"related"},{"name":"isobutyric aciduria","type":"exact"},{"name":"isobutyryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0012648","xrefs":{"Monarch":{"xref_id":"0012648"}}}


id: MOD:01229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to an L-iodohistidine.","definition_xrefs":["PubMed:2026710","Unimod:129#H","PubMed:15627961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated residue","termid":"MOD:00500"},{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-iodohistidine","synonyms":[{"name":"I1His","type":"exact"},{"name":"Iodination","type":"related"},{"name":"Iodo","type":"related"}],"termid":"MOD:01229"}


id: GO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of transition metal ions within a cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular transition metal ion homeostasis (obsolete GO:0046916)","synonyms":[{"name":"cellular transition metal ion homeostasis","type":"exact"}],"termid":"GO:0046916"}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: PBO:0025522
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by X. laevis MO15","termid":"PBO:0025522"}


id: PR:O59811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 622 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04600","PANTHER:PTHR13182:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic 60S subunit biogenesis factor SPCC550.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.15c","secondary_identifiers":["UniProtKB:O59811"],"synonyms":[{"name":"Spom972h-ZNF622","type":"exact"},{"name":"pre-60S factor REI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59811"}


id: GO:1900650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of dehydroaustinol biosynthetic process","termid":"GO:1900649"},{"relation_name":"negatively_regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"down regulation of dehydroaustinol anabolism","type":"exact"},{"name":"down regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"down regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"down regulation of dehydroaustinol formation","type":"exact"},{"name":"down regulation of dehydroaustinol synthesis","type":"exact"},{"name":"down-regulation of dehydroaustinol anabolism","type":"exact"},{"name":"down-regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"down-regulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"down-regulation of dehydroaustinol formation","type":"exact"},{"name":"down-regulation of dehydroaustinol synthesis","type":"exact"},{"name":"downregulation of dehydroaustinol anabolism","type":"exact"},{"name":"downregulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"downregulation of dehydroaustinol biosynthetic process","type":"exact"},{"name":"downregulation of dehydroaustinol formation","type":"exact"},{"name":"downregulation of dehydroaustinol synthesis","type":"exact"},{"name":"inhibition of dehydroaustinol anabolism","type":"exact"},{"name":"inhibition of dehydroaustinol biosynthesis","type":"exact"},{"name":"inhibition of dehydroaustinol biosynthetic process","type":"narrow"},{"name":"inhibition of dehydroaustinol formation","type":"exact"},{"name":"inhibition of dehydroaustinol synthesis","type":"exact"},{"name":"negative regulation of dehydroaustinol anabolism","type":"exact"},{"name":"negative regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"negative regulation of dehydroaustinol formation","type":"exact"},{"name":"negative regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900650"}


id: PBO:0049274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSK3B divergent transcript","termid":"PBO:0049274"}


id: GO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.","definition_xrefs":["PMID:11197234","GOC:jl","PMID:11293569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosome","secondary_identifiers":["Wikipedia:Hydrogenosome"],"termid":"GO:0042566"}


id: MONDO:0004484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the gallbladder.","definition_xrefs":["NCIT:C5735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"digestive system melanoma","termid":"MONDO:0045070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder melanoma","secondary_identifiers":["DOID:8167","UMLS:C1333749","MEDGEN:232225"],"synonyms":[{"name":"gall bladder melanoma","type":"exact"},{"name":"gall bladder melanoma (disease)","type":"exact"},{"name":"gallbladder malignant melanoma","type":"exact"},{"name":"gallbladder melanoma","type":"exact"},{"name":"malignant melanoma of gallbladder","type":"exact"},{"name":"malignant melanoma of the gallbladder","type":"exact"},{"name":"melanoma (disease) of gall bladder","type":"exact"},{"name":"melanoma of gallbladder","type":"exact"},{"name":"melanoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004484","xrefs":{"Monarch":{"xref_id":"0004484"}}}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["UniProtKB:O60160","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: GO:1903669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:22711818","GOC:TermGenie","GO_REF:0000059","PMID:24390142"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chemorepellent activity (obsolete GO:1903669)","synonyms":[{"name":"activation of chemorepellant activity","type":"narrow"},{"name":"activation of chemorepellent activity","type":"narrow"},{"name":"positive regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellant activity","type":"exact"},{"name":"up regulation of chemorepellent activity","type":"exact"},{"name":"up-regulation of chemorepellant activity","type":"exact"},{"name":"up-regulation of chemorepellent activity","type":"exact"},{"name":"upregulation of chemorepellant activity","type":"exact"},{"name":"upregulation of chemorepellent activity","type":"exact"}],"termid":"GO:1903669"}


id: GO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the deltoid tuberosity over time, from its formation to the mature structure. The deltoid tuberosity is the region on the shaft of the humerus to which the deltoid muscle attaches. The deltoid tuberosity develops through endochondral ossification in a two-phase process; an initiating tendon-dependent phase, and a muscle-dependent growth phase.","definition_xrefs":["GOC:yaf","PMID:17567668","UBERON:0002498","Wikipedia:Deltoid_tuberosity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deltoid tuberosity development","termid":"GO:0035993"}


id: PBO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH2 antisense RNA 1","termid":"PBO:0044996"}


id: PBO:0085823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; protein abundance increases in response to DNA replication stress","termid":"PBO:0085823"}


id: PBO:0059806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 32","termid":"PBO:0059806"}


id: MONDO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preoccupations with appearance or self-image causing significant distress or impairment in important areas of functioning.","definition_xrefs":["MESH:D057215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"body dysmorphic disorder","secondary_identifiers":["MEDGEN:2302","DOID:0060163","icd11.foundation:731724655","ICD10CM:F45.22","SCTID:83482000","UMLS:C0005887"],"synonyms":[{"name":"body dysmorphia","type":"exact"},{"name":"dysmorphic syndrome","type":"exact"},{"name":"dysmorphophobia","type":"exact"}],"termid":"MONDO:0000690","xrefs":{"Monarch":{"xref_id":"0000690"}}}


id: GO:0015513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of nitrite from one side of the membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity secondary active nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite uptake permease activity","type":"exact"}],"termid":"GO:0015513"}


id: PBO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain","termid":"PBO:0048079"}


id: FYPO:0006536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell periphery during vegetative growth","synonyms":[{"name":"increased protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"increased protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006536"}


id: GO:0050044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose 6-phosphate = D-tagatose 6-phosphate.","definition_xrefs":["RHEA:13033","EC:5.3.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"galactose-6-phosphate isomerase activity","secondary_identifiers":["MetaCyc:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN","KEGG_REACTION:R03240"],"synonyms":[{"name":"D-galactose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-galactose-6-phosphate ketol-isomerase activity","type":"related"}],"termid":"GO:0050044"}


id: PBO:0073294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 16","termid":"PBO:0073294"}


id: GO:1904788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of induction of conjugation with cellular fusion.","definition_xrefs":["GO_REF:0000063","PMID:22144909","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter (obsolete GO:1904788)","synonyms":[{"name":"positive regulation of induction of conjugation with cellular fusion by global transcription regulation from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of global transcription from Pol II promoter","type":"related"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of induction of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904788"}


id: PBO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2 (predicted)","termid":"PBO:0036511"}


id: FYPO:0000355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal endoplasmic reticulum morphology","synonyms":[{"name":"endoplasmic reticulum morphology: normal","type":"related"},{"name":"normal ER morphology","type":"exact"},{"name":"normal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"normal endoplasmic reticulum morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000355"}


id: PBO:0003798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Far10 (predicted)","termid":"PBO:0003798"}


id: PBO:0116324
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extracellular Five-prime Nucleotidase","termid":"PBO:0116324"}


id: GO:0010651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"negatively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by electrical coupling","termid":"GO:0010651"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: PBO:0069252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 507, pseudogene","termid":"PBO:0069252"}


id: MONDO:0020463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital ectropion that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital ectropion","secondary_identifiers":["MEDGEN:1842688","UMLS:C5681630","Orphanet:99171","GARD:19673"],"synonyms":[{"name":"nonsyndromic congenital ectropion","type":"exact"}],"termid":"MONDO:0020463","xrefs":{"Monarch":{"xref_id":"0020463"}}}


id: MONDO:0016024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"shoulder and thorax deformity-congenital heart disease syndrome","secondary_identifiers":["GARD:4859","Orphanet:1940"],"termid":"MONDO:0016024","xrefs":{"Monarch":{"xref_id":"0016024"}}}


id: GO:0102490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8-oxo-dGTP + 2 H2O = 8-oxo-dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 8-oxo-dGTP phosphohydrolase activity (obsolete GO:0102490)","termid":"GO:0102490"}


id: PBO:0017883
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKbp12 Homolog","termid":"PBO:0017883"}


id: GO:1904850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization to telomere.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:BHF_telomere","GOC:TermGenie","PMID:25467444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to telomere","termid":"GO:0070203"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to chromosome, telomeric region","termid":"GO:1904815"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"establishment of protein localization to telomere","termid":"GO:0070200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein localization to telomere","synonyms":[{"name":"down regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"down regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down regulation of establishment of protein localization to telomere","type":"exact"},{"name":"down-regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of establishment of protein localization to telomere","type":"exact"},{"name":"downregulation of establishment of protein localisation to telomere","type":"exact"},{"name":"downregulation of establishment of protein localization to chromosome, telomeric region","type":"exact"},{"name":"downregulation of establishment of protein localization to telomere","type":"exact"},{"name":"inhibition of establishment of protein localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of establishment of protein localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of protein localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:1904850"}


id: PBO:0045631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 43 (pseudogene)","termid":"PBO:0045631"}


id: MONDO:1012793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in three-spined stickleback due to a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, HPS5-related, three-spined stickleback","secondary_identifiers":["OMIA:002116-69293"],"synonyms":[{"name":"coat colour, albinism, oculocutaneous, HPS5-related in Gasterosteus aculeatus (three-spined stickleback)","type":"exact"}],"termid":"MONDO:1012793","xrefs":{"Monarch":{"xref_id":"1012793"}}}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:23447642","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: PBO:0046643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 24","termid":"PBO:0046643"}


id: MONDO:1010630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in killer whale.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, killer whale","secondary_identifiers":["OMIA:000185-9733"],"termid":"MONDO:1010630","xrefs":{"Monarch":{"xref_id":"1010630"}}}


id: MONDO:1010892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CTSD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CTSD-related, dog","secondary_identifiers":["OMIA:001505-9615"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 10, dog","type":"related"}],"termid":"MONDO:1010892","xrefs":{"Monarch":{"xref_id":"1010892"}}}


id: PBO:0029638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_ubiquitination","termid":"PBO:0029638"}


id: GO:0120025
data:
  {"annotated_genes":["SJAG_04001","SJAG_00677","SJAG_02486","SJAG_01769","SJAG_02700","SJAG_01215","SJAG_03453","SJAG_04982","SJAG_03646","SJAG_00938","SJAG_04901","SJAG_03011","SJAG_00663","SJAG_01732","SJAG_00870","SJAG_02351","SJAG_00185","SJAG_03145","SJAG_01943","SJAG_00667","SJAG_00514","SJAG_02228","SJAG_03357","SJAG_04781","SJAG_04509","SJAG_02222","SJAG_01017","SJAG_02924","SJAG_03444","SJAG_00700","SJAG_04470","SJAG_04723","SJAG_04703","SJAG_04100","SJAG_02718","SJAG_01993","SJAG_01171","SJAG_02989","SJAG_03688","SJAG_05001","SJAG_01794","SJAG_04887","SJAG_03596","SJAG_05285","SJAG_01888","SJAG_02169","SJAG_02379","SJAG_01978","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005937"},{"annotations":[93494,101466,115774,91984,94860,107625,93298,88553,99060,87729,90306,101467,107686,99663,114220,118856,110895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[87590,98486],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[99626,105557,115567,93987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[90135,80492,108623,98401,96368,87335,113918,78087,73942,97226,92057,106410,102777,105651,71899,97420,77338,115414,75713,108413,106711,79563,90181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[109765,95870],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[81360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005902"}]},"cv_name":"cellular_component","definition":"A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0120025","terms_by_termid":{"GO:0005902":null,"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase Rib3 (predicted)","termid":"PBO:0018060"}


id: PBO:0091761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-specific trancription factor Mi","termid":"PBO:0091761"}


id: PBO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-end-recognizing protein (predicted)","termid":"PBO:0002186"}


id: PBO:0068255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 2","termid":"PBO:0068255"}


id: PBO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0034651"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: PBO:0084640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microsomal beta-keto-reductase; contains oleate response element (ORE) sequence in the promoter region; mutants exhibit reduced VLCFA synthesis, accumulate high levels of dihydrosphingosine, phytosphingosine and medium-chain ceramides","termid":"PBO:0084640"}


id: PBO:0075025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-36","termid":"PBO:0075025"}


id: GO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"positively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte differentiation","synonyms":[{"name":"activation of hemocyte differentiation","type":"narrow"},{"name":"positive regulation of arthropod blood cell differentiation","type":"exact"},{"name":"stimulation of hemocyte differentiation","type":"narrow"},{"name":"up regulation of hemocyte differentiation","type":"exact"},{"name":"up-regulation of hemocyte differentiation","type":"exact"},{"name":"upregulation of hemocyte differentiation","type":"exact"}],"termid":"GO:0045612"}


id: PBO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP4 antisense RNA 1","termid":"PBO:0047834"}


id: GO:1902833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"activation of cell proliferation in dorsal spinal cord","type":"narrow"},{"name":"up regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"up-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"upregulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:1902833"}


id: PBO:0076822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5A","termid":"PBO:0076822"}


id: MONDO:0017696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, non progressive hepatic form","secondary_identifiers":["MEDGEN:344701","Orphanet:308638","NANDO:2201160","UMLS:C1856302","GARD:17395"],"synonyms":[{"name":"GBE deficiency, non progressive hepatic form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, non progressive hepatic form","type":"exact"},{"name":"GSD type 4, non progressive hepatic form","type":"exact"},{"name":"GSDIV, non progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type 4, non progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type IV, non progressive hepatic form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, non progressive hepatic form","type":"exact"},{"name":"glycogenosis type 4, non progressive hepatic form","type":"exact"},{"name":"glycogenosis type IV, non progressive hepatic form","type":"exact"}],"termid":"MONDO:0017696","xrefs":{"Monarch":{"xref_id":"0017696"}}}


id: MONDO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial typical, susceptibility to, 2","secondary_identifiers":["MEDGEN:341144","OMIM:300125","UMLS:C1848066"],"synonyms":[{"name":"Mfts","type":"related"},{"name":"Mgr2","type":"related"},{"name":"migraine with or without aura, susceptibility to, 2","type":"related"},{"name":"migraine, familial typical, susceptibility to, 2","type":"exact"},{"name":"migraine, familial typical, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0010253","xrefs":{"Monarch":{"xref_id":"0010253"}}}


id: PBO:0088492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase, implicated in cellular detoxification","termid":"PBO:0088492"}


id: PBO:0084279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the endoplasmic reticulum; required for normal content of cell wall beta-1,6-glucan","termid":"PBO:0084279"}


id: PBO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_polysaccharide_level","termid":"PBO:0030718"}


id: GO:0046645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell activation","synonyms":[{"name":"activation of gamma-delta T cell activation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte activation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell activation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte activation","type":"exact"},{"name":"stimulation of gamma-delta T cell activation","type":"narrow"},{"name":"up regulation of gamma-delta T cell activation","type":"exact"},{"name":"up-regulation of gamma-delta T cell activation","type":"exact"},{"name":"upregulation of gamma-delta T cell activation","type":"exact"}],"termid":"GO:0046645"}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: GO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component and mediating entry of the virus into the cell.","definition_xrefs":["UniProtKB-KW:KW-1183","GOC:dph","PMID:7621403","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"virus receptor activity","synonyms":[{"name":"viral receptor activity","type":"exact"}],"termid":"GO:0001618"}


id: GO:0015612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-arabinose(out) = ADP + phosphate + L-arabinose(in).","definition_xrefs":["RHEA:30007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose transmembrane transporter activity","termid":"GO:0015147"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type L-arabinose transporter activity","secondary_identifiers":["EC:7.5.2.12","MetaCyc:ABC-2-RXN"],"synonyms":[{"name":"L-arabinose porter activity","type":"exact"},{"name":"L-arabinose-importing ATPase activity","type":"narrow"}],"termid":"GO:0015612"}


id: PR:Q9Y7I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6C3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.03c","synonyms":[{"name":"Spom972h-SPAC6C3.03c","type":"exact"}],"termid":"PR:Q9Y7I3"}


id: GO:0045178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal part of cell","termid":"GO:0045178"}


id: GO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing glutamate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted glutamate transport vesicle","synonyms":[{"name":"clathrin sculpted glutamate constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted glutamate transport vesicle","type":"exact"}],"termid":"GO:0060199"}


id: GO:0046799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The recruitment of the helicase-primase complex to viral DNA lesions during viral DNA repair.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of helicase-primase complex to DNA lesions (obsolete GO:0046799)","termid":"GO:0046799"}


id: PBO:0068246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 3","termid":"PBO:0068246"}


id: PBO:0081311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92 pseudogene 1, Y-linked","termid":"PBO:0081311"}


id: PATO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000184 arousal (obsolete PATO:0000184)","termid":"PATO:0000184"}


id: MONDO:1040018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that is transmitted via X-linked inheritance and involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), and also a distinctive pattern of other features including dysmorphisms and/or congenital malformations.","definition_xrefs":["PMID:33244165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic complex neurodevelopmental disorder","termid":"MONDO:0800439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"X-linked syndromic complex neurodevelopmental disorder","termid":"MONDO:1040018","xrefs":{"Monarch":{"xref_id":"1040018"}}}


id: PBO:0050903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFI30 lysosomal thiol reductase","termid":"PBO:0050903"}


id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: MONDO:0006638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild to fulminant necrotizing vaso-occlusive retinitis associated with a high incidence of retinal detachment and poor vision outcome.","definition_xrefs":["MESH:D015882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute retinal necrosis syndrome","secondary_identifiers":["DOID:3611","EFO:1000795","SCTID:231986000","UMLS:C0035319","MEDGEN:48434"],"synonyms":[{"name":"acute retinal necrosis","type":"exact"}],"termid":"MONDO:0006638","xrefs":{"Monarch":{"xref_id":"0006638"}}}


id: PBO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: MONDO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urachal cancer is a type of bladder cancer, making up less than 1% of all bladder cancers. The urachus is a structure normally only present during development in the womb that connects the bellybutton and the bladder. This connection normally disappears before birth, but in some people remains. Urachalcancers are usually diagnosed in adults in their 50's and 60's and may develop at the dome or anterior wall of the bladder, along the midline of the body (including the belly button), and between the pubis symphasis and the bladder.Most urachal cancersare adenocarcinomas (cancers that develop from gland cells).Others may besarcomas (which develop from connective tissue -such as leiomyosarcoma, rhabdomyosarcoma, and malignant fibrous histiocytoma), small cell carcinomas, transitional cell cancer, and mixed neoplasias. Most individuals with urachal cancer have symptoms of with hematuria (blood in urine). Other symptoms may include abdominal pain, a palpable abdominal mass, mucinuria, and bacteriuria. Treatment usually involved surgery to remove the cancer.","definition_xrefs":["GARD:0007836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder urachal carcinoma","secondary_identifiers":["MESH:C536475","NCIT:C39842","ONCOTREE:URCA","MEDGEN:419015","UMLS:C2931202","DOID:5958"],"synonyms":[{"name":"bladder urachal cancer","type":"exact"},{"name":"bladder urachal carcinoma","type":"exact"},{"name":"urachal carcinoma","type":"related"}],"termid":"MONDO:0003715","xrefs":{"Monarch":{"xref_id":"0003715"}}}


id: GO:0015928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of fucosyl compounds, substances containing a group derived from a cyclic form of fucose or a fucose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fucosidase activity","termid":"GO:0015928"}


id: FYPO:0005871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a primary septum that is thinner than normal and does not extend over the entire cell division site.","definition_xrefs":["PomBase:mah","PMID:27898700"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased primary cell septum thickness","termid":"FYPO:0003205"},{"relation_name":"is_a","term_name":"decreased primary cell septum thickness","termid":"FYPO:0003205"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"thin, incomplete primary cell septum","synonyms":[{"name":"incomplete primary cell septum with decreased thickness","type":"exact"},{"name":"incomplete primary cell septum with reduced thickness","type":"exact"},{"name":"thin, discontinuous primary septum","type":"exact"},{"name":"thin, incomplete primary cell septum during mitotic cell cycle","type":"related"},{"name":"thin, incomplete primary cell septum during vegetative growth","type":"exact"},{"name":"thin, incomplete primary septum","type":"exact"}],"termid":"FYPO:0005871"}


id: PBO:0074021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14 pseudogene 1","termid":"PBO:0074021"}


id: MONDO:0003188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile myoclonic epilepsy (obsolete MONDO:0003188)","termid":"MONDO:0003188","xrefs":{"Monarch":{"xref_id":"0003188"}}}


id: PBO:0046072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 3","termid":"PBO:0046072"}


id: PBO:0063618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3","termid":"PBO:0063618"}


id: PBO:0065870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27A, member RAS oncogene family","termid":"PBO:0065870"}


id: PBO:0038475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 13","termid":"PBO:0038475"}


id: GO:0030435
data:
  {"annotated_genes":["SJAG_01321","SJAG_04184","SJAG_03746","SJAG_00821","SJAG_00114","SJAG_00826","SJAG_04615","SJAG_00405","SJAG_02320","SJAG_04922","SJAG_04901","SJAG_04080","SJAG_00993","SJAG_04859","SJAG_03090","SJAG_04868","SJAG_03250","SJAG_00974","SJAG_03557","SJAG_01662","SJAG_03915","SJAG_04238","SJAG_01531","SJAG_04236","SJAG_04140","SJAG_04853","SJAG_02718","SJAG_04483","SJAG_02241","SJAG_04781","SJAG_01017","SJAG_01483","SJAG_03587","SJAG_03057","SJAG_03483","SJAG_02248","SJAG_04271","SJAG_04275","SJAG_02529","SJAG_00971","SJAG_05309","SJAG_00486","SJAG_02169","SJAG_00663","SJAG_02712","SJAG_01769","SJAG_03688","SJAG_03536","SJAG_04470","SJAG_03013","SJAG_04010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112300,100245,96025,96441,104668,111092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[93495,110897],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[93945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88159,89711,91247,87665],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[103700,113678,108639,117391,117399],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[104521,74761,90974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[97059,99418,118464,98336,97096,109687,118163,106940,118647,113525,104833,101235,90763,94867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[107271,103658,99348,96375,91765,99347,106385,102447,97060,113526],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[110780],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[101816],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90193],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[91661],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[99350,99636,105563,93993,99349,115572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:mah","GOC:pamgo_curators","ISBN:0072992913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Sporogenesis"],"synonyms":[{"name":"cellular spore formation by sporulation","type":"exact"},{"name":"spore biosynthesis","type":"exact"},{"name":"spore differentiation","type":"exact"},{"name":"spore formation","type":"exact"}],"termid":"GO:0030435","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0039582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host PKR (protein kinase regulated by RNA) activity by promoting the localization of PKR in the nucleus. For example, human cytomegalovirus (HMCV) gene products directly interact with PKR and inhibit its activation by sequestering it in the nucleus, away from both its activator (cytoplasmic dsRNA) and its substrate, (eIF2alpha).","definition_xrefs":["PMID:16987971"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host PKR activity by positive regulation of PKR nuclear localization (obsolete GO:0039582)","synonyms":[{"name":"suppression by virus of host PKR activity by nuclear sequestration of PKR","type":"exact"},{"name":"suppression by virus of host PKR activity by positive regulation of PKR localization to nucleus","type":"exact"},{"name":"suppression by virus of host PKR activity by sequestering of PKR in nucleus","type":"exact"}],"termid":"GO:0039582"}


id: MONDO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the diaphragm.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragm disorder","secondary_identifiers":["DOID:10481","ICD9:519.4","EFO:0007233","SCTID:48475001","UMLS:C0152097","MEDGEN:508886"],"synonyms":[{"name":"diaphragm disease","type":"exact"},{"name":"diaphragm disease or disorder","type":"exact"},{"name":"diaphragmatic disease","type":"related"},{"name":"diaphragmatic disorder","type":"related"},{"name":"disease of diaphragm","type":"exact"},{"name":"disease or disorder of diaphragm","type":"exact"},{"name":"disorder of diaphragm","type":"exact"}],"termid":"MONDO:0005728","xrefs":{"Monarch":{"xref_id":"0005728"}}}


id: GO:0009652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, such as leaves or tendrils, in response to a touch stimulus, usually toward or away from it.","definition_xrefs":["PMID:16153165","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotropism","secondary_identifiers":["Wikipedia:Thigmotropism"],"termid":"GO:0009652"}


id: PBO:0068651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 32, pseudogene","termid":"PBO:0068651"}


id: GO:1900003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine-type endopeptidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine-type endopeptidase activity","synonyms":[{"name":"regulation of blood coagulation factor activity","type":"related"}],"termid":"GO:1900003"}


id: PBO:0090715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer zeta subunit","termid":"PBO:0090715"}


id: PBO:0028535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028535"}


id: PBO:0063976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 10","termid":"PBO:0063976"}


id: MONDO:0957953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Garg-Mishra progeroid syndrome","secondary_identifiers":["OMIM:620601","UMLS:C5882717","MEDGEN:1847272"],"termid":"MONDO:0957953","xrefs":{"Monarch":{"xref_id":"0957953"}}}


id: PBO:0063042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase domain containing paladin 1","termid":"PBO:0063042"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: MONDO:0010366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 5","secondary_identifiers":["MEDGEN:336854","MESH:C564480","OMIM:300581","UMLS:C1845119"],"synonyms":[{"name":"FG syndrome 5","type":"exact"},{"name":"FGS5","type":"related"}],"termid":"MONDO:0010366","xrefs":{"Monarch":{"xref_id":"0010366"}}}


id: PBO:0074175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 37 member 2","termid":"PBO:0074175"}


id: PBO:0057067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148b","termid":"PBO:0057067"}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: MONDO:0013006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An isolated growth hormone deficiency characterized by autosomal recessive inheritance of low but detectable levels of GH, short stature, significantly retarded bone age, and a positive response and immunologic tolerance to growth hormone therapy that has material basis in mutation in the GH1 or GHRHR genes on chromosomes 17q23.3 and 7p14.3, respectively.","definition_xrefs":["PMID:8288694","DOID:0060874","PMID:10678654","PMID:8528260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency type IB","secondary_identifiers":["OMIM:612781","GARD:3919","MEDGEN:411242","Orphanet:231671","UMLS:C2748571","MESH:C567564"],"synonyms":[{"name":"IGHD 1B","type":"related"},{"name":"IGHD IB","type":"exact"},{"name":"IGHD1B","type":"related"},{"name":"congenital IGHD type IB","type":"exact"},{"name":"congenital isolated GH deficiency type IB","type":"exact"},{"name":"congenital isolated growth hormone deficiency type IB","type":"exact"},{"name":"dwarfism of Sindh","type":"exact"},{"name":"growth hormone deficiency, isolated, type IB","type":"exact"},{"name":"isolated Growth hormone deficiency, type 1B","type":"related"},{"name":"isolated growth hormone deficiency type 1B","type":"related"},{"name":"isolated growth hormone deficiency, type IB","type":"related"}],"termid":"MONDO:0013006","xrefs":{"Monarch":{"xref_id":"0013006"}}}


id: PBO:0034715
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage-hair hypoplasia","termid":"PBO:0034715"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LK binding","type":"exact"},{"name":"LMW kininogen binding","type":"exact"}],"termid":"GO:0030986"}


id: GO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol metabolic process (obsolete GO:0044107)","termid":"GO:0044107"}


id: PATO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the presence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F mating type","termid":"PATO:0001347"}


id: PBO:0004393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.3","termid":"PBO:0004393"}


id: PBO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion_during_vegetative_growth","termid":"PBO:0035795"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["PMID:20505341","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: GO:0102905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (+)-valencene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.73","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"valencene synthase activity","secondary_identifiers":["MetaCyc:RXN-8608","RHEA:29511"],"termid":"GO:0102905"}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: PATO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a liquid by virtue of the bearer's ability to attraction of molecules at its surface as a result of unbalanced molecular cohesive forces.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Surface_tension"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surface tension","termid":"PATO:0001461"}


id: GO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of astral microtubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"negatively_regulates","term_name":"astral microtubule depolymerization","termid":"GO:0060172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"negative regulation of astral microtubule depolymerization","synonyms":[{"name":"astral microtubule stabilization","type":"exact"}],"termid":"GO:0032932"}


id: PATO:0001384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing four homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Hexaploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaploid","termid":"PATO:0001384"}


id: FYPO:0004712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more nucleotide metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Nucleotide metabolism RNAs are transcribed from genes whose products are involved in any nucleotide metabolic process.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of nucleotide metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of nucleotide metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of nucleotide metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of nucleotide metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased nucleotide metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of nucleotide metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004712"}


id: PATO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001062 absolute elasticity (obsolete PATO:0001062)","termid":"PATO:0001062"}


id: MONDO:0054582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Townes-Brocks syndrome","termid":"MONDO:0007142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Townes-Brocks syndrome 2","secondary_identifiers":["OMIM:617466","MEDGEN:1381939","UMLS:C4479534"],"synonyms":[{"name":"TBS2","type":"related"},{"name":"Townes-Brocks syndrome 2","type":"exact"}],"termid":"MONDO:0054582","xrefs":{"Monarch":{"xref_id":"0054582"}}}


id: MONDO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of gastrointestinal dysmotility, peripheral neuropathy, chronic progressive external ophthalmoplegia and leukoencephalopathy.","definition_xrefs":["Orphanet:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0005336","MONDO:0019254","MONDO:0005244","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial neurogastrointestinal encephalomyopathy","secondary_identifiers":["SCTID:718214007","NCIT:C119678","MEDGEN:167876","GARD:9920","MESH:C537477","NORD:1449","UMLS:C0872218"],"synonyms":[{"name":"MNGIE","type":"exact"},{"name":"MNGIE syndrome","type":"related"},{"name":"Mitochondrial Neurogastrointestinal Encephalopathy","type":"exact"},{"name":"Mitochondrial neurogastrointestinal encephalopathy","type":"exact"},{"name":"OGIMD","type":"related"},{"name":"POLIP","type":"related"},{"name":"mitochondrial Neurogastrointestingal encephalopathy","type":"exact"},{"name":"mitochondrial neurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"myoneurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"oculogastrointestinal muscular dystrophy","type":"related"},{"name":"polyneuropathy, ophthalmoplegia, leukoencephalopathy, and intestinal pseudo-obstruction","type":"related"},{"name":"thymidine phosphorylase deficiency","type":"related"}],"termid":"MONDO:0017575","xrefs":{"Monarch":{"xref_id":"0017575"}}}


id: GO:1905688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:PARL","GO_REF:0000059","GOC:TermGenie","GOC:bc","PMID:23091060"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of diacylglycerol kinase activity (obsolete GO:1905688)","synonyms":[{"name":"down regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down regulation of DG kinase activity","type":"exact"},{"name":"down regulation of DGK activity","type":"exact"},{"name":"down regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down regulation of diglyceride kinase activity","type":"exact"},{"name":"down regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"down-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"down-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"down-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"down-regulation of DG kinase activity","type":"exact"},{"name":"down-regulation of DGK activity","type":"exact"},{"name":"down-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"down-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"down-regulation of diglyceride kinase activity","type":"exact"},{"name":"down-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"downregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"downregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"downregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"downregulation of DG kinase activity","type":"exact"},{"name":"downregulation of DGK activity","type":"exact"},{"name":"downregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol kinase activity","type":"exact"},{"name":"downregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"downregulation of diglyceride kinase activity","type":"exact"},{"name":"downregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"inhibition of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"inhibition of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"inhibition of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"inhibition of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of DG kinase activity","type":"narrow"},{"name":"inhibition of DGK activity","type":"narrow"},{"name":"inhibition of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol kinase activity","type":"narrow"},{"name":"inhibition of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"inhibition of diglyceride kinase activity","type":"narrow"},{"name":"inhibition of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"negative regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"negative regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"negative regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"negative regulation of DG kinase activity","type":"exact"},{"name":"negative regulation of DGK activity","type":"exact"},{"name":"negative regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"negative regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"negative regulation of diglyceride kinase activity","type":"exact"},{"name":"negative regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905688"}


id: PBO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor Ers1","termid":"PBO:0005283"}


id: GO:0005649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transportin (obsolete GO:0005649)","synonyms":[{"name":"karyopherin-beta2","type":"exact"},{"name":"transportin","type":"exact"}],"termid":"GO:0005649"}


id: MONDO:0007557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa with congenital localized absence of skin and deformity of nails","secondary_identifiers":["SCTID:2689001","ICD9:757.39","DOID:0111347","MESH:C562638","UMLS:C0268371","MEDGEN:82797","OMIM:132000"],"synonyms":[{"name":"EBD, Bart type","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Bart type","type":"related"},{"name":"epidermolysis bullosa with congenital localized absence of skin and deformity of nails","type":"exact"}],"termid":"MONDO:0007557","xrefs":{"Monarch":{"xref_id":"0007557"}}}


id: MONDO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis and male hypogonadism","secondary_identifiers":["SCTID:2355008","UMLS:C1839989","MEDGEN:333456","MESH:C537365","ICD9:759.89","OMIM:308200","Orphanet:431"],"synonyms":[{"name":"Ichthyosis-male hypogonadism syndrome","type":"exact"},{"name":"Ruds","type":"related"},{"name":"ichthyosis and male hypogonadism","type":"exact"},{"name":"rud syndrome","type":"related"}],"termid":"MONDO:0010623","xrefs":{"Monarch":{"xref_id":"0010623"}}}


id: GO:0010504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell cycle arrest in response to nitrogen starvation (obsolete GO:0010504)","termid":"GO:0010504"}


id: PBO:0065541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTENP1 antisense RNA","termid":"PBO:0065541"}


id: PBO:0029006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intron-specific_abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0029006"}


id: MONDO:0024770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome, familial, Behcet-like","termid":"MONDO:0031384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","secondary_identifiers":["UMLS:C5575495","Orphanet:676125","MEDGEN:1808082","OMIM:301074"],"synonyms":[{"name":"AIFBL2","type":"exact"},{"name":"autoinflammatory syndrome, familial, X-linked, Behcet-like 2","type":"exact"},{"name":"deficiency 1n ELF4, X-linked","type":"exact"}],"termid":"MONDO:0024770","xrefs":{"Monarch":{"xref_id":"0024770"}}}


id: GO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"proline-rich region binding","termid":"GO:0070064"}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: PBO:0062922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 10","termid":"PBO:0062922"}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: GO:0140450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of targeting specific proteins to the Golgi apparatus. Usually requires an organelle-specific protein sequence motif or a protein modification (for example a palmitoylation).","definition_xrefs":["PMID:18817523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"protein targeting to Golgi apparatus","termid":"GO:0140450"}


id: PBO:0075857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 5","termid":"PBO:0075857"}


id: GO:0050885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling balance","synonyms":[{"name":"regulation of balance","type":"related"}],"termid":"GO:0050885"}


id: MOD:00054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-acetyl-L-glutamine.","definition_xrefs":["RESID:AA0045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-glutamine","synonyms":[{"name":"(2S)-2-acetamido-5-pentanediamic acid","type":"exact"},{"name":"2-acetylamino-5-amino-5-oxopentanoic acid","type":"exact"},{"name":"2-acetylamino-5-pentanediamic acid","type":"exact"},{"name":"2-acetylazanyl-5-azanyl-5-oxopentanoic acid","type":"exact"},{"name":"AcGln","type":"exact"},{"name":"N-acetyl-L-glutamine","type":"exact"},{"name":"N-acetylated L-glutamine","type":"exact"},{"name":"acetylglutamine","type":"exact"}],"termid":"MOD:00054"}


id: MONDO:0024529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial mitral valve prolapse","termid":"MONDO:0008004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"MVP1","secondary_identifiers":["GARD:3688","UMLS:C1834819","OMIM:157700","MEDGEN:320443"],"synonyms":[{"name":"MVP1","type":"exact"},{"name":"PMV","type":"related"},{"name":"barlow syndrome","type":"related"},{"name":"click-murmur syndrome","type":"related"},{"name":"floppy mitral valve","type":"related"},{"name":"mitral regurgitation, familial","type":"related"},{"name":"mitral valve prolapse 1","type":"related"},{"name":"mitral valve prolapse, familial","type":"related"},{"name":"mitral valve prolapse, familial, X-linked","type":"related"},{"name":"mitral valve prolapse, myxomatous 1","type":"related"},{"name":"myxomatous mitral valve prolapse 1","type":"related"},{"name":"myxomatous valvular disease, familial","type":"related"},{"name":"prolapsed mitral valve","type":"related"}],"termid":"MONDO:0024529","xrefs":{"Monarch":{"xref_id":"0024529"}}}


id: PBO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 1","termid":"PBO:0051486"}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: PBO:0029009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_outer_repeat","termid":"PBO:0029009"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: PBO:0052847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-3","termid":"PBO:0052847"}


id: GO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-tyrosine = ADP + protein L-tyrosine phosphate by a non-membrane spanning protein.","definition_xrefs":["EC:2.7.10.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activity","termid":"GO:0004713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016301","GO:0016740","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"non-membrane spanning protein tyrosine kinase activity","secondary_identifiers":["Reactome:R-HSA-6788582","Reactome:R-HSA-1168459","Reactome:R-HSA-1168767","Reactome:R-HSA-1369115","Reactome:R-HSA-1112703","Reactome:R-HSA-879910","Reactome:R-HSA-8871373","Reactome:R-HSA-1168423","Reactome:R-HSA-1295519","Reactome:R-HSA-432148","Reactome:R-HSA-453200","Reactome:R-HSA-1112602","Reactome:R-HSA-437936","Reactome:R-HSA-6786096","Reactome:R-HSA-6786095"],"synonyms":[{"name":"ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"related"},{"name":"ATP:protein-tyrosine O-phosphotransferase activity","type":"broad"},{"name":"Bruton's tyrosine kinase activity","type":"narrow"},{"name":"cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"focal adhesion kinase activity","type":"narrow"},{"name":"janus kinase 1 activity","type":"narrow"},{"name":"janus kinase 2 activity","type":"narrow"},{"name":"janus kinase 3 activity","type":"narrow"},{"name":"non-specific protein-tyrosine kinase activity","type":"related"},{"name":"p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:0004715"}


id: PBO:0085106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear response regulator and transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; part of a branched two-component signaling system; required for optimal induction of heat-shock genes in response to oxidative stress; involved in osmoregulation; relocalizes to the cytosol in response to hypoxia; SKN7 has a paralog, HMS2, that arose from the whole genome duplication","termid":"PBO:0085106"}


id: PR:Q9Y7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02637","PANTHER:PTHR11139:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.07c","secondary_identifiers":["UniProtKB:Q9Y7K2"],"synonyms":[{"name":"PI3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTOR","type":"exact"}],"termid":"PR:Q9Y7K2"}


id: MONDO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine porocarcinoma (obsolete MONDO:0004282)","termid":"MONDO:0004282","xrefs":{"Monarch":{"xref_id":"0004282"}}}


id: GO:0004338
data:
  {"annotated_genes":["SJAG_02192","SJAG_05001","SJAG_01888","SJAG_03646","SJAG_01171"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72242,72345,75023,78834,94599],"is_not":false,"summary":null,"term":"GO:0004338"}]},"cv_name":"molecular_function","definition":"Catalysis of the successive hydrolysis of beta-D-glucose units from the non-reducing ends of (1->3)-beta-D-glucans, releasing alpha-glucose.","definition_xrefs":["EC:3.2.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01171":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucan exo-1,3-beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.58-RXN"],"synonyms":[{"name":"1,3-beta-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,3-glucan exo-hydrolase activity","type":"related"},{"name":"exo (1->3)-beta-glucanase activity","type":"related"},{"name":"exo-1,3-beta-D-glucanase activity","type":"related"},{"name":"exo-1,3-beta-glucanase activity","type":"related"},{"name":"exo-1,3-beta-glucosidase activity","type":"related"},{"name":"exo-beta-(1->3)-D-glucanase activity","type":"related"},{"name":"exo-beta-(1->3)-glucanohydrolase activity","type":"related"},{"name":"exo-beta-1,3-D-glucanase activity","type":"related"},{"name":"exo-beta-1,3-glucanase activity","type":"related"},{"name":"glucan 1,3-beta-glucosidase activity","type":"broad"}],"termid":"GO:0004338","terms_by_termid":{"GO:0004338":null}}


id: MONDO:0021260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the sensory ganglion.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy","synonyms":[{"name":"disease of sensory ganglion","type":"exact"},{"name":"disease or disorder of sensory ganglion","type":"exact"},{"name":"disorder of sensory ganglion","type":"exact"},{"name":"sensory ganglion disease","type":"exact"},{"name":"sensory ganglion disease or disorder","type":"exact"}],"termid":"MONDO:0021260","xrefs":{"Monarch":{"xref_id":"0021260"}}}


id: PBO:0086355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purine nucleoside phosphorylase; specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway","termid":"PBO:0086355"}


id: GO:0030148
data:
  {"annotated_genes":["SJAG_01356","SJAG_01057","SJAG_05311","SJAG_02717","SJAG_01857","SJAG_04178","SJAG_00630","SJAG_04878","SJAG_00176","SJAG_02706","SJAG_04986","SJAG_00506","SJAG_02488","SJAG_02305","SJAG_03953","SJAG_03690","SJAG_02168","SJAG_00880","SJAG_04913","SJAG_02885","SJAG_03076","SJAG_02429","SJAG_04550","SJAG_01300","SJAG_01219","SJAG_03015","SJAG_02085","SJAG_02842"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74755,74855,75437,79513,91422,93027,97706,99763,100943,109193,110904,117123],"is_not":false,"summary":null,"term":"GO:0030148"},{"annotations":[80864,75922,78628,79881,108387,80700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[81272,112126,94748,91283,97009,77238,94639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[78627,75460,80699,105539,96406,109287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00506":null,"SJAG_00630":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02706":null,"SJAG_02717":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03076":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5129","Reactome:R-HSA-1660661"],"synonyms":[{"name":"sphingolipid anabolism","type":"exact"},{"name":"sphingolipid biosynthesis","type":"exact"},{"name":"sphingolipid formation","type":"exact"},{"name":"sphingolipid synthesis","type":"exact"}],"termid":"GO:0030148","terms_by_termid":{"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: PBO:0086956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of ornithine decarboxylase Spe1p; antizyme that binds to Spe1p to stimulate ubiquitin-independent degradation by the proteasome; binding of polyamines to nascent Oaz1p during translation stimulates +1 ribosomal frameshifting, allowing translation of full-length Oaz1p","termid":"PBO:0086956"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:mah","GOC:BHF","GOC:pde","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: PBO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt2","termid":"PBO:0005726"}


id: PBO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z15","termid":"PBO:0003759"}


id: MONDO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX testicular disorder of sex development","termid":"MONDO:0100249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX sex reversal 2","secondary_identifiers":["GARD:15249","DOID:0111763","UMLS:C2749215","OMIM:278850","MEDGEN:411414"],"synonyms":[{"name":"46,XX SEX reversal 2","type":"related"},{"name":"46,XX Sex reversal type 2","type":"exact"},{"name":"46,XX sex reversal 2","type":"exact"},{"name":"46XX sex reversal 2","type":"exact"},{"name":"SRXX2","type":"related"},{"name":"chromosome 17Q24 Duplication syndrome","type":"related"}],"termid":"MONDO:0010218","xrefs":{"Monarch":{"xref_id":"0010218"}}}


id: GO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the bHLH-ZIP proteins Mad and Max.","definition_xrefs":["PMID:8224841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Mad-Max complex","termid":"GO:0070443"}


id: PBO:0086526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YCR025C is not an essential gene","termid":"PBO:0086526"}


id: GO:0019394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucarate, the anion of glucaric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"},{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucarate catabolic process","secondary_identifiers":["MetaCyc:GLUCARDEG-PWY"],"synonyms":[{"name":"glucarate breakdown","type":"exact"},{"name":"glucarate catabolism","type":"exact"},{"name":"glucarate degradation","type":"exact"}],"termid":"GO:0019394"}


id: MONDO:1011519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, cattle","secondary_identifiers":["OMIA:000437-9913"],"termid":"MONDO:1011519","xrefs":{"Monarch":{"xref_id":"1011519"}}}


id: GO:0019268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glutamate, catalyzed by the enzyme glutamate dehydrogenase (NADP+).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+) (obsolete GO:0019268)","synonyms":[{"name":"glutamate anabolism, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate formation, using glutamate dehydrogenase (NAD(P)+)","type":"exact"},{"name":"glutamate synthesis, using glutamate dehydrogenase (NAD(P)+)","type":"exact"}],"termid":"GO:0019268"}


id: GO:0021503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of the neural fold elevations that results in the movement of the tips of the elevations towards each other in order to fuse.","definition_xrefs":["GO_REF:0000021","GOC:dgh","PMID:15806586","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"neural fold formation","termid":"GO:0001842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold bending","termid":"GO:0021503"}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: MONDO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant disorder affecting the skeletal muscles of the face, scapula, and upper arm. Patients present with muscle weakness in these anatomic areas. The muscle weakness eventually spreads to other skeletal muscles as well.","definition_xrefs":["NCIT:C84704"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"telomere syndrome","termid":"MONDO:0100137"},{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy","secondary_identifiers":["MESH:D020391","OMIMPS:158900","Orphanet:269","SCTID:399091004","MEDGEN:65956","GARD:9941","MedDRA:10064087","NANDO:2200859","NORD:1116","UMLS:C0238288","DOID:11727","NANDO:1200491","icd11.foundation:621965073"],"synonyms":[{"name":"FSH dystrophy","type":"exact"},{"name":"FSHD","type":"exact"},{"name":"Landouzy Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine muscular dystrophy","type":"exact"},{"name":"Landouzy-Dejerine myopathy","type":"exact"},{"name":"facioscapulohumeral dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral myopathy","type":"exact"},{"name":"muscular dystrophy, Landouzy-Dejerine","type":"exact"}],"termid":"MONDO:0001347","xrefs":{"Monarch":{"xref_id":"0001347"}}}


id: MONDO:0012469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 14","secondary_identifiers":["UMLS:C1853196","MEDGEN:343990","OMIM:610320","MESH:C565202"],"synonyms":[{"name":"MYP14","type":"exact"},{"name":"myopia 14","type":"exact"}],"termid":"MONDO:0012469","xrefs":{"Monarch":{"xref_id":"0012469"}}}


id: GO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an epidermal growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0016301","GO:0140096","GO:0004672","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"epidermal growth factor receptor activity","secondary_identifiers":["GO:0005023"],"synonyms":[{"name":"EGF receptor activity","type":"exact"},{"name":"EGFR","type":"exact"},{"name":"TGF-alpha receptor activity","type":"exact"},{"name":"epidermal growth factor-activated receptor activity","type":"exact"},{"name":"transforming growth factor-alpha receptor activity","type":"exact"}],"termid":"GO:0005006"}


id: GO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"}


id: MONDO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-intellectual disability (obsolete MONDO:0035863)","secondary_identifiers":["Orphanet:611327"],"termid":"MONDO:0035863","xrefs":{"Monarch":{"xref_id":"0035863"}}}


id: FYPO:0004474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle DNA replication checkpoint is normal (i.e. indistinguishable from wild type). The mitotic DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"normal DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitotic DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0004474"}


id: GO:0000447
data:
  {"annotated_genes":["SJAG_01623","SJAG_04524","SJAG_02644","SJAG_03796","SJAG_00965","SJAG_04188","SJAG_06613","SJAG_00955","SJAG_02861","SJAG_02547","SJAG_02553","SJAG_00897","SJAG_03234","SJAG_00772","SJAG_01551","SJAG_03425","SJAG_04582","SJAG_02250","SJAG_04174","SJAG_03952","SJAG_04916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60813,72111,72980,73667,74676,76292,80078,94197,96004,96294,102655,104096,104314,105202,105203,108571,113080,113800,114906,114994,118222],"is_not":false,"summary":null,"term":"GO:0000447"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02861":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"endonucleolytic cleavage at A2","type":"narrow"}],"termid":"GO:0000447","terms_by_termid":{"GO:0000447":null}}


id: PBO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 2","termid":"PBO:0060499"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["GOC:dos","MeSH:D009435","GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


