# terms

id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: PBO:0046992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member C","termid":"PBO:0046992"}


id: PBO:0062945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 3","termid":"PBO:0062945"}


id: PBO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit SUMO ligase subunit Nse2","termid":"PBO:0034733"}


id: PBO:0081150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP90 zinc finger protein","termid":"PBO:0081150"}


id: MONDO:0100138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial myopathy caused by defects in the MICOS subunit gene APOO (MIC26). Modelling in yeast and flies demonstrate an inability to insert MICOS complex into the inner mitohondrial membrane. Associated symptoms include, lactic acidosis, cognitive impairment and autistic features.","definition_xrefs":["PMID:32439808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"X-linked recessive mitochondrial myopathy","synonyms":[{"name":"X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features","type":"exact"}],"termid":"MONDO:0100138","xrefs":{"Monarch":{"xref_id":"0100138"}}}


id: PBO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.58","termid":"PBO:0002386"}


id: PBO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-12, pseudogene","termid":"PBO:0052889"}


id: PBO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactivation escape 1","termid":"PBO:0051667"}


id: GO:1904516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myofibroblast cell.","definition_xrefs":["GOC:TermGenie","PMID:23026405","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast cell apoptotic process","synonyms":[{"name":"MFB apoptosis","type":"narrow"},{"name":"MFB apoptotic process","type":"exact"},{"name":"myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904516"}


id: PBO:0071132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 134","termid":"PBO:0071132"}


id: PR:P31318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arg11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.09c","synonyms":[{"name":"Spom972h-arg11","type":"exact"}],"termid":"PR:P31318"}


id: PBO:0086319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to GPI-anchored aspartic proteases; such proteases are Yap1p and Yap3p; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086319"}


id: MONDO:0016855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mowat-Wilson syndrome","termid":"MONDO:0009341"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005027","MONDO:0002320"],"is_obsolete":false,"name":"Mowat-Wilson syndrome due to monosomy 2q22","secondary_identifiers":["UMLS:C5437617","Orphanet:261537","GARD:17248","MEDGEN:1723926"],"synonyms":[{"name":"Hirschsprung disease and intellectual disability due to 2q22 microdeletion","type":"exact"},{"name":"Hirschsprung disease and intellectual disability due to del(2)(q22)","type":"exact"},{"name":"Hirschsprung disease and intellectual disability due to monosomy 2q22","type":"exact"},{"name":"Mowat-Wilson syndrome due to 2q22 microdeletion","type":"exact"},{"name":"Mowat-Wilson syndrome due to del(2)q(22)","type":"exact"},{"name":"Mowat-Wilson syndrome due to monosomy type 2q22","type":"exact"}],"termid":"MONDO:0016855","xrefs":{"Monarch":{"xref_id":"0016855"}}}


id: MONDO:0006133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the cervix. It is characterized by the presence of cystic spaces surrounded by palisaded epithelial cells. The cystic spaces contain eosinophilic hyaline material or mucin. Nuclear pleomorphism, necrotic changes, and a high mitotic rate are also present.","definition_xrefs":["NCIT:C6346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenoid cystic carcinoma","secondary_identifiers":["GARD:20498","UMLS:C1332911","ICD10CM:C53.0","Orphanet:213823","DOID:4867","EFO:1000161","ONCOTREE:CACC","MEDGEN:232337"],"synonyms":[{"name":"adenoid cystic carcinoma of cervix","type":"exact"},{"name":"adenoid cystic carcinoma of cervix uteri","type":"exact"},{"name":"adenoid cystic carcinoma of the cervix","type":"exact"},{"name":"adenoid cystic carcinoma of the cervix uteri","type":"exact"},{"name":"adenoid cystic carcinoma of the uterine cervix","type":"exact"},{"name":"adenoid cystic carcinoma of uterine cervix","type":"exact"},{"name":"cervical adenoid cystic cancer","type":"exact"},{"name":"cervical adenoid cystic carcinoma","type":"exact"},{"name":"cervix uteri adenoid cystic carcinoma","type":"exact"},{"name":"uterine cervix adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006133","xrefs":{"Monarch":{"xref_id":"0006133"}}}


id: GO:0018651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene-4-sulfonate + 1/2 O2 + H+ = HSO3(-) + 4-hydroxytoluene.","definition_xrefs":["UM-BBD_reactionID:r0296"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene-4-sulfonate monooxygenase activity (obsolete GO:0018651)","synonyms":[{"name":"toluene-4-sulphonate monooxygenase activity","type":"exact"}],"termid":"GO:0018651"}


id: MONDO:0010933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in mutation in the SLC26A4 gene on chromosome 7q22. Mutation in the FOXI1 gene has been found to be a rare cause of EVA. EVA may also be rarely caused by digenic inheritance of heterozygous mutations in the SLC26A4 and FOXI1 genes, or in the SLC26A4 and KCNJ10 genes.","definition_xrefs":["DOID:0110498","OMIM:600791","PMID:9500541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 4","secondary_identifiers":["MEDGEN:761234","MESH:C566366","GARD:22584","UMLS:C3538946"],"synonyms":[{"name":"DFNB4","type":"narrow"},{"name":"autosomal recessive deafness 4 with enlarged vestibular aqueduct","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 4","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 4","type":"narrow"},{"name":"deafness, autosomal recessive 4, with enlarged vestibular aqueduct","type":"narrow"},{"name":"dilated vestibular aqueduct","type":"related"},{"name":"enlarged vestibular aqueduct","type":"exact"},{"name":"enlarged vestibular aqueduct, digenic","type":"exact"},{"name":"neurosensory nonsyndromic recessive deafness 4","type":"narrow"}],"termid":"MONDO:0010933","xrefs":{"Monarch":{"xref_id":"0010933"}}}


id: GO:1901609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"negatively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle transport along microtubule","synonyms":[{"name":"down regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down regulation of vesicle transport along microtubule","type":"exact"},{"name":"down-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"down-regulation of vesicle transport along microtubule","type":"exact"},{"name":"downregulation of microtubule-based vesicle localization","type":"exact"},{"name":"downregulation of vesicle transport along microtubule","type":"exact"},{"name":"inhibition of microtubule-based vesicle localization","type":"exact"},{"name":"inhibition of vesicle transport along microtubule","type":"narrow"},{"name":"negative regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901609"}


id: PR:Q09863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nst1 gene.","definition_xrefs":["UniProtKB:Q09863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein nst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.10c","synonyms":[{"name":"Spom972h-nst1","type":"exact"}],"termid":"PR:Q09863"}


id: MONDO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the musculoskeletal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of musculoskeletal system","secondary_identifiers":["DOID:0060032"],"synonyms":[{"name":"musculoskeletal system autoimmune disease","type":"exact"},{"name":"musculoskeletal system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000589","xrefs":{"Monarch":{"xref_id":"0000589"}}}


id: PBO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20C golgi associated secretory pathway kinase","termid":"PBO:0046897"}


id: MONDO:0022745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed dust pneumoconiosis","secondary_identifiers":["UMLS:C0264436","ICD9:504","MEDGEN:78109","SCTID:32139003"],"synonyms":[{"name":"Mixed dust pneumoconiosis","type":"related"},{"name":"labrador lung","type":"related"},{"name":"mixed dust pneumoconiosis","type":"exact"}],"termid":"MONDO:0022745","xrefs":{"Monarch":{"xref_id":"0022745"}}}


id: GO:0033434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"AUC codon-amino acid adaptor activity","synonyms":[{"name":"ATC codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033434"}


id: PBO:0069445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 710, pseudogene","termid":"PBO:0069445"}


id: PATO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute","termid":"PATO:0002091"}


id: PR:O74734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal recycling factor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.09","synonyms":[{"name":"Spom972h-rrf1","type":"exact"}],"termid":"PR:O74734"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: PBO:0086587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YHR033W has a paralog, PRO1, that arose from the whole genome duplication","termid":"PBO:0086587"}


id: PBO:0109225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 6","termid":"PBO:0109225"}


id: FYPO:0008316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial ribosome complex assembly is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial translation initiation complex assembly","termid":"FYPO:0008316"}


id: MONDO:0015777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypothyroidism that occurs in an adult.","definition_xrefs":["MONDO:patterns/adult"],"gene_count":0,"genotype_count":0,"name":"obsolete adult hypothyroidism (obsolete MONDO:0015777)","secondary_identifiers":["Orphanet:177101"],"synonyms":[{"name":"rare adult hypothyroidism","type":"exact"}],"termid":"MONDO:0015777","xrefs":{"Monarch":{"xref_id":"0015777"}}}


id: PATO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000793 immubocompetent value (obsolete PATO:0000793)","termid":"PATO:0000793"}


id: PBO:0087310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small plasma membrane protein; confers resistance to amphotericin B and is a potential target of this common antifungal drug; related to a family of plant polypeptides that are overexpressed under high salt concentration or low temperature; not essential for viability; deletion causes hyperpolarization of the plasma membrane potential","termid":"PBO:0087310"}


id: MONDO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition sometimes occurring after tooth extraction, particularly after traumatic extraction, resulting in a dry appearance of the exposed bone in the socket, due to disintegration or loss of the blood clot. It is basically a focal osteomyelitis without suppuration and is accompanied by severe pain (alveolalgia) and foul odor. (Dorland, 28th ed)","definition_xrefs":["MESH:D004368"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete extrinsic allergic alveolitis (obsolete MONDO:0004553)","termid":"MONDO:0004553"},{"relation_name":"is_a","term_name":"periostitis","termid":"MONDO:0004934"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alveolar periostitis","secondary_identifiers":["UMLS:C0013240","ICD9:526.5","DOID:13585","SCTID:61804006","MEDGEN:3923"],"synonyms":[{"name":"alveolitis of jaw","type":"exact"},{"name":"dry socket","type":"exact"},{"name":"dry tooth socket","type":"exact"},{"name":"extrinsic allergic alveolitis of jaw skeleton","type":"exact"},{"name":"jaw skeleton extrinsic allergic alveolitis","type":"exact"}],"termid":"MONDO:0001752","xrefs":{"Monarch":{"xref_id":"0001752"}}}


id: PBO:0063488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDK4 antisense RNA 1","termid":"PBO:0063488"}


id: MONDO:0007304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral Bridge","secondary_identifiers":["OMIM:118000","UMLS:C1861694","MEDGEN:348426"],"synonyms":[{"name":"cervical vertebral Bridge","type":"exact"}],"termid":"MONDO:0007304","xrefs":{"Monarch":{"xref_id":"0007304"}}}


id: PBO:0072848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 3","termid":"PBO:0072848"}


id: PBO:0064104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIWIL4 antisense RNA 1","termid":"PBO:0064104"}


id: PBO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 3, pseudogene","termid":"PBO:0070046"}


id: PBO:0082423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and short chain ester hydrolase; null mutant results in the accumulation of both triacylglycerol and fatty acids derived from neutral lipids and phospholipids as well as an increase in the quantity of lipid droplets; contains an alpha/beta hydrolase domain with a conserved GXSXG lipase motif; localizes to lipid droplets; GFP-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082423"}


id: PBO:0042123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 196","termid":"PBO:0042123"}


id: FYPO:0004113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, small cell","synonyms":[{"name":"inviable after spore germination, undivided small cell","type":"exact"},{"name":"inviable following spore germination, without cell division, small cell","type":"exact"},{"name":"inviable germinated spore, without cell division, small cell","type":"exact"},{"name":"lethal after spore germination, without cell division, small cell","type":"exact"}],"termid":"FYPO:0004113"}


id: GO:0106036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly or arrangement of constituent parts apicomedial cortex actomyosin.","definition_xrefs":["PMID:28263180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"assembly of apicomedial cortex actomyosin","termid":"GO:0106036"}


id: PATO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diploidy quality inhering in a bearer in by virtue of belonging in a species whose one of the sexes has haploid cells and the other has diploid cells.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Haplodiploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diploid","termid":"PATO:0001394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplodiploid","termid":"PATO:0001395"}


id: PBO:0054085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1436","termid":"PBO:0054085"}


id: PBO:0003599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc9 (predicted)","termid":"PBO:0003599"}


id: PR:Q9HDY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional repressor EMSY that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00762","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M cell-type agglutination protein mam3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.02c","secondary_identifiers":["UniProtKB:Q9HDY9"],"synonyms":[{"name":"Spom972h-EMSY","type":"exact"}],"termid":"PR:Q9HDY9"}


id: GO:0019358
data:
  {"annotated_genes":["SJAG_03298","SJAG_00957","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88480,90116,109188],"is_not":false,"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The generation of nicotinate nucleotide without de novo synthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"},{"relation_name":"is_a","term_name":"pyridine nucleotide salvage","termid":"GO:0019365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nicotinate nucleotide biosynthesis, salvage pathway","type":"exact"},{"name":"nicotinate nucleotide biosynthetic process, salvage pathway","type":"exact"}],"termid":"GO:0019358","terms_by_termid":{"GO:0019358":null}}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: PBO:0078874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 8","termid":"PBO:0078874"}


id: PBO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit D2","termid":"PBO:0060596"}


id: MONDO:0009821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized osteosclerosis with periosteal bone formation, characteristic facial dysmorphism, brain abnormalities including intracerebral calcifications, and neonatal lethal course.","definition_xrefs":["Orphanet:1832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal osteosclerotic bone dysplasia","secondary_identifiers":["icd11.foundation:1306493470","UMLS:C1850106","MESH:C564916","MEDGEN:342416","MESH:C535282","OMIM:259775","OMIM:259660","GARD:282"],"synonyms":[{"name":"RAINE syndrome","type":"exact"},{"name":"RNS","type":"related"},{"name":"Raine syndrome","type":"exact"},{"name":"combination of microcephaly, exophthalmos, hypoplastic nose and midface, gum hyperplasia, cleft palate, apparently low-set ears, and osteosclerosis","type":"related"},{"name":"lethal osteosclerotic bone dysplasia","type":"exact"},{"name":"osteomalacia, sclerosing, with cerebral calcification","type":"exact"},{"name":"osteosclerotic bone dysplasia, lethal","type":"exact"}],"termid":"MONDO:0009821","xrefs":{"Monarch":{"xref_id":"0009821"}}}


id: MONDO:0015318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with collagen disease (obsolete MONDO:0015318)","termid":"MONDO:0015318","xrefs":{"Monarch":{"xref_id":"0015318"}}}


id: GO:1900037
data:
  {"annotated_genes":["SJAG_03345","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115993,88725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular response to hypoxic stress","type":"exact"},{"name":"regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900037","terms_by_termid":{"GO:1900039":null}}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: _global:interaction_genotype_b
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_genotype_b","termid":"_global:interaction_genotype_b"}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: GO:0140780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in an anatomical system process of its host organism.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host system process (obsolete GO:0140780)","termid":"GO:0140780"}


id: PBO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 48 pseudogene","termid":"PBO:0062120"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: PBO:0012312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 2, Pre8 (predicted)","termid":"PBO:0012312"}


id: SO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone deacetylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_deacetylation","termid":"SO:0001223"},{"relation_name":"is_a","term_name":"gene_silenced_by_histone_modification","termid":"SO:0001225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_deacetylation","synonyms":[{"name":"gene silenced by histone deacetylation","type":"exact"}],"termid":"SO:0001227"}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["RESID:AA0343","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0009144
data:
  {"annotated_genes":["SJAG_MIT15","SJAG_03903","SJAG_02887","SJAG_04849","SJAG_00685","SJAG_04192","SJAG_00839","SJAG_07003","SJAG_MIT37","SJAG_02564","SJAG_00461","SJAG_01471","SJAG_03660","SJAG_02009","SJAG_06621","SJAG_02038","SJAG_03828","SJAG_00027","SJAG_02135","SJAG_01310","SJAG_05314","SJAG_04422","SJAG_02369","SJAG_02945","SJAG_06622","SJAG_00836","SJAG_00915","SJAG_02105","SJAG_MIT09","SJAG_03114","SJAG_00438","SJAG_01298","SJAG_05204","SJAG_02598","SJAG_00136","SJAG_02107","SJAG_02785","SJAG_03373","SJAG_00605","SJAG_04487","SJAG_04334","SJAG_00542","SJAG_03925","SJAG_00133","SJAG_04122","SJAG_00985","SJAG_00885","SJAG_04495","SJAG_04048","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68886,68966,59764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[108961,74194,108963,102911,115952,108962,105370,105000,108966,79617,103169,97771,108964,105371,108965,105001,108967,97500,94013,104999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[98497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[88062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[65611,76671,101763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[74846,77912],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[117618],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[103207,94336,93346,103181,108355,118698,104557,107457,115447,107365,118704,88591,102564,118692,101343,92328,92755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[106810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[71770],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009144","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0009216":null,"GO:0035863":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: GO:1904629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:19765580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diterpene","termid":"GO:1904629"}


id: PBO:0066028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 17","termid":"PBO:0066028"}


id: MONDO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral cystocele","secondary_identifiers":["ICD10CM:N81.12","MEDGEN:751516","SCTID:441891001","DOID:14130","ICD9:618.02","UMLS:C2711750"],"termid":"MONDO:0001885","xrefs":{"Monarch":{"xref_id":"0001885"}}}


id: GO:0097291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which phosphate ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:lb","PMID:18784102","PMID:22506049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal phosphate ion absorption","synonyms":[{"name":"renal phosphate absorption","type":"exact"}],"termid":"GO:0097291"}


id: MONDO:0010170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the CLRN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 3","termid":"MONDO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 3A","secondary_identifiers":["UMLS:C5779850","OMIM:276902","GARD:15242","DOID:0110841","MEDGEN:1830415","ICD10CM:H35.5"],"synonyms":[{"name":"CLRN1 Usher syndrome","type":"exact"},{"name":"USH3A","type":"exact"},{"name":"USHER syndrome, type IIIA","type":"related"},{"name":"Usher syndrome caused by mutation in CLRN1","type":"exact"},{"name":"Usher syndrome type 3A","type":"exact"},{"name":"Usher syndrome type IIIA","type":"exact"},{"name":"Usher syndrome, type 3","type":"related"},{"name":"Usher syndrome, type 3A","type":"related"}],"termid":"MONDO:0010170","xrefs":{"Monarch":{"xref_id":"0010170"}}}


id: PBO:0090102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc8","termid":"PBO:0090102"}


id: PBO:0003106
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator","termid":"PBO:0003106"}


id: PBO:0078298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-3","termid":"PBO:0078298"}


id: PBO:0074709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74A","termid":"PBO:0074709"}


id: MONDO:0859218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable neurologic and brain abnormalities","secondary_identifiers":["MEDGEN:1794270","OMIM:619694","UMLS:C5562060"],"termid":"MONDO:0859218","xrefs":{"Monarch":{"xref_id":"0859218"}}}


id: GO:0000740
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane fusion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000740","terms_by_termid":{"GO:0048288":null}}


id: SO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylpseudouridine","secondary_identifiers":["RNAMOD:055"],"synonyms":[{"name":"1-methylpseudouridine","type":"exact"},{"name":"m1Y","type":"exact"},{"name":"one methylpseudouridine","type":"exact"}],"termid":"SO:0001347"}


id: MONDO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital tracheomalacia is a rare condition where the trachea is soft and flexible causing the tracheal wall to collapse when exhaling, coughing or crying, that usually presents in infancy, and that is characterized by stridor and noisy breathing or upper respiratory infections. Tracheomalacia improves by the age of 18-24 months.","definition_xrefs":["Orphanet:95430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital tracheomalacia","secondary_identifiers":["SCTID:95467005","DOID:0060313","MedDRA:10010654","NORD:2028","ICD9:748.3","HP:0002779","icd11.foundation:1616705280","icd11.foundation:303133490","MEDGEN:140261","MESH:D055090","NCIT:C98634","NANDO:2200195","UMLS:C0392109","GARD:10515"],"synonyms":[{"name":"Congenital Tracheomalacia","type":"exact"},{"name":"congenital major airway collapse","type":"exact"},{"name":"congenital tracheomalacia","type":"exact"},{"name":"tracheomalacia","type":"related"},{"name":"tracheomalacia, congenital","type":"exact"},{"name":"type 1 tracheomalacia","type":"related"}],"termid":"MONDO:0019804","xrefs":{"Monarch":{"xref_id":"0019804"}}}


id: PBO:0062479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily K member 1 pseudogene","termid":"PBO:0062479"}


id: PBO:0091550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SBA1","termid":"PBO:0091550"}


id: MONDO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the DNMT3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","secondary_identifiers":["NCIT:C156430","UMLS:C4551557","OMIM:242860","MEDGEN:1636193","DOID:0090008","GARD:15188"],"synonyms":[{"name":"DNMT3B immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 1","type":"exact"},{"name":"ICF1","type":"related"},{"name":"centromeric instability, immunodeficiency syndrome","type":"related"},{"name":"immune deficiency, variable, with centromeric instability of chromosomes 1, 9, and 16","type":"related"},{"name":"immunodeficiency syndrome, variable","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in DNMT3B","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 1","type":"exact"}],"termid":"MONDO:0009454","xrefs":{"Monarch":{"xref_id":"0009454"}}}


id: MONDO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoidosis affecting the tissues of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac sarcoidosis","secondary_identifiers":["DOID:13405","MEDGEN:140260","NCIT:C35589","SCTID:75403004","UMLS:C0392077"],"synonyms":[{"name":"heart sarcoidosis","type":"exact"},{"name":"sarcoidosis of heart","type":"exact"}],"termid":"MONDO:0001707","xrefs":{"Monarch":{"xref_id":"0001707"}}}


id: PATO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow green","termid":"PATO:0001941"}


id: PBO:0077091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 6","termid":"PBO:0077091"}


id: MONDO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 1","secondary_identifiers":["DOID:0080345","MEDGEN:1632198","UMLS:C4551988","OMIM:119580"],"synonyms":[{"name":"BCD syndrome","type":"related"},{"name":"BCDS1","type":"related"},{"name":"CDH1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"Lagophthalmia with bilateral cleft 51P and palate","type":"related"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CDH1","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"related"},{"name":"blepharocheilodontic syndrome 1","type":"exact"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"ectropion, Inferior, with cleft 51P and/Or palate","type":"related"},{"name":"elschnig syndrome","type":"related"}],"termid":"MONDO:0054740","xrefs":{"Monarch":{"xref_id":"0054740"}}}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: MONDO:0033682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"skeletal dysplasia-T-cell immunodeficiency-developmental delay syndrome","secondary_identifiers":["MEDGEN:1799322","GARD:22070","Orphanet:508533","UMLS:C5567899"],"termid":"MONDO:0033682","xrefs":{"Monarch":{"xref_id":"0033682"}}}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: PBO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPP38 divergent transcript","termid":"PBO:0071793"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: MONDO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 6","secondary_identifiers":["UMLS:C2677121","OMIM:612231","MEDGEN:436865"],"synonyms":[{"name":"CRCS6","type":"exact"},{"name":"colorectal cancer, susceptibility to, 6","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 8Q23","type":"related"}],"termid":"MONDO:0012822","xrefs":{"Monarch":{"xref_id":"0012822"}}}


id: GO:2000386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"positively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovarian follicle development","synonyms":[{"name":"positive regulation of follicular phase","type":"related"}],"termid":"GO:2000386"}


id: GO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of soluble and insoluble elastin. Specific cleavages are also produced at Ala14-Leu15 and Tyr16-Leu17 in the B chain of insulin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete macrophage elastase activity (obsolete GO:0004234)","synonyms":[{"name":"MMP-12","type":"exact"},{"name":"macrophage elastase activity","type":"exact"},{"name":"metalloesterase activity","type":"exact"}],"termid":"GO:0004234"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: PBO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A5","termid":"PBO:0039713"}


id: GO:0006496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal N-glycosylation (obsolete GO:0006496)","synonyms":[{"name":"protein amino acid terminal N-glycosylation","type":"exact"}],"termid":"GO:0006496"}


id: FYPO:0007659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at a normal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon the first division. Daughter cells that are larger than normal upon formation divide earlier, and smaller-formed daughter cells divide later, than cells formed at a normal size.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at normal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at normal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by equal cell division","type":"exact"},{"name":"variable cell size at division with normal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at normal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at normal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at normal size","type":"exact"}],"termid":"FYPO:0007659"}


id: PBO:0091498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific kinetochore regulator (Meikin) Moa1","termid":"PBO:0091498"}


id: FYPO:0004165
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119208],"is_not":false,"summary":null,"term":"FYPO:0004165"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of glucose consumed by cells in a given time is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal glucose consumption","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal glucose consumption during mitotic cell cycle","type":"related"},{"name":"normal glucose consumption during vegetative growth","type":"exact"},{"name":"normal glucose uptake","type":"related"}],"termid":"FYPO:0004165","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0004165":null}}


id: MONDO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the prostate. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate leiomyoma","secondary_identifiers":["UMLS:C1335510","DOID:2887","MEDGEN:233875"],"synonyms":[{"name":"leiomyoma of prostate","type":"exact"},{"name":"leiomyoma of prostate gland","type":"exact"},{"name":"leiomyoma of the prostate","type":"exact"},{"name":"prostate gland leiomyoma","type":"exact"},{"name":"prostate leiomyoma","type":"exact"},{"name":"prostatic leiomyoma","type":"exact"}],"termid":"MONDO:0002452","xrefs":{"Monarch":{"xref_id":"0002452"}}}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: PBO:0073841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A1","termid":"PBO:0073841"}


id: MONDO:1010064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-MDA5 autoantibodies. It is often associated with dermatomyositis rashes, amyopathic or hypomyopathic muscle involvement and interstitial lung disease, frequently as a rapid progressive course and high mortality.","definition_xrefs":["PMID:31279808","PMID:33405101"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"interstitial lung disease","termid":"MONDO:0015925"},{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"anti-MDA5 dermatomyositis","synonyms":[{"name":"MDA-5 DM","type":"exact"},{"name":"MDA5+ DM","type":"exact"},{"name":"anti-melanoma differentiation-associated gene 5 dermatomyositis","type":"exact"},{"name":"clinically amyopathic dermatomyositis","type":"related"}],"termid":"MONDO:1010064","xrefs":{"Monarch":{"xref_id":"1010064"}}}


id: PBO:0079670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V2 antisense RNA 1","termid":"PBO:0079670"}


id: MONDO:0011831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 8","secondary_identifiers":["UMLS:C1843896","MESH:C564400","OMIM:607450","DOID:0110076","MEDGEN:336069"],"synonyms":[{"name":"ARVC8","type":"exact"},{"name":"ARVD8","type":"exact"},{"name":"DSP arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 8","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in DSP","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 8","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 8","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 8","type":"exact"}],"termid":"MONDO:0011831","xrefs":{"Monarch":{"xref_id":"0011831"}}}


id: MONDO:0859286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, language delay, and skeletal defects with or without seizures","secondary_identifiers":["OMIM:620029","DOID:0070536","UMLS:C5774213","MEDGEN:1823986"],"termid":"MONDO:0859286","xrefs":{"Monarch":{"xref_id":"0859286"}}}


id: PBO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein serine/threonine kinase alpha subunit Ssp2","termid":"PBO:0018196"}


id: PBO:0088389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Lcp5","termid":"PBO:0088389"}


id: PBO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 1","termid":"PBO:0046159"}


id: PBO:0056080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member L","termid":"PBO:0056080"}


id: GO:0044150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of host on or near symbiont surface (obsolete GO:0044150)","synonyms":[{"name":"development of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044150"}


id: GO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002840"}


id: MONDO:1010143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incontinentia pigmenti that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incontinentia pigmenti, non-human animal","secondary_identifiers":["OMIA:001899"],"termid":"MONDO:1010143","xrefs":{"Monarch":{"xref_id":"1010143"}}}


id: GO:0010036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a boron-containing substance stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to boron-containing substance","synonyms":[{"name":"response to boron","type":"exact"}],"termid":"GO:0010036"}


id: PBO:0065454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 2","termid":"PBO:0065454"}


id: PBO:0091483
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription decreased","termid":"PBO:0091483"}


id: MONDO:0008708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocallosal syndrome (ACS) is a polymalformative syndrome characterized by agenesis of corpus callosum (CC), distal anomalies of limbs, minor craniofacial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:36"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocallosal syndrome","secondary_identifiers":["DOID:9250","OMIM:200990","NCIT:C84531","SCTID:715951007","icd11.foundation:1286493807","MESH:D055673","MEDGEN:162915","UMLS:C0796147","GARD:5721"],"synonyms":[{"name":"ACLS","type":"exact"},{"name":"ACS","type":"exact"},{"name":"Joubert syndrome 12","type":"related"},{"name":"Joubert syndrome 12/15, digenic","type":"related"},{"name":"Schinzel acrocallosal syndrome","type":"exact"},{"name":"Schinzel syndrome 1","type":"exact"},{"name":"absence of corpus callosum with unusual facial appearance, mental deficiency, duplication of the halluces and polydactyly","type":"related"},{"name":"acrocallosal syndrome","type":"exact"},{"name":"acrocallosal syndrome, Schinzel type","type":"related"},{"name":"hallux Duplication, postaxial polydactyly, and absence of corpus callosum","type":"related"}],"termid":"MONDO:0008708","xrefs":{"Monarch":{"xref_id":"0008708"}}}


id: PBO:0071130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 132","termid":"PBO:0071130"}


id: MONDO:0021108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by acute inflammation of the meninges of the brain and/or spinal cord.","definition_xrefs":["NCIT:C26828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis","secondary_identifiers":["ICD9:322.9","UMLS:C0025289","SCTID:7180009","MEDGEN:6298","MESH:D008581"],"synonyms":[{"name":"inflammation of meninx","type":"exact"},{"name":"meningitis","type":"exact"},{"name":"meningitis (disease)","type":"exact"},{"name":"meninx inflammation","type":"exact"}],"termid":"MONDO:0021108","xrefs":{"Monarch":{"xref_id":"0021108"}}}


id: PBO:0089073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19","termid":"PBO:0089073"}


id: PBO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd2","termid":"PBO:0005122"}


id: MONDO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the lung.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of lung","secondary_identifiers":["UMLS:C0241983","DOID:490","MEDGEN:1843480"],"synonyms":[{"name":"lung hemangioma","type":"exact"},{"name":"pulmonary hemangioma","type":"exact"}],"termid":"MONDO:0003194","xrefs":{"Monarch":{"xref_id":"0003194"}}}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:21498478","PMID:18337471","PMID:21422230","PMID:21555462","PMID:25150219","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: PBO:0081321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 107","termid":"PBO:0081321"}


id: GO:1901085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolizidine alkaloid.","definition_xrefs":["PMID:30001795","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"pyrrolizidine alkaloid biosynthetic process","synonyms":[{"name":"pyrrolizidine alkaloid anabolism","type":"exact"},{"name":"pyrrolizidine alkaloid biosynthesis","type":"exact"},{"name":"pyrrolizidine alkaloid formation","type":"exact"},{"name":"pyrrolizidine alkaloid synthesis","type":"exact"}],"termid":"GO:1901085"}


id: PBO:0050721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 7","termid":"PBO:0050721"}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: PBO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 36, pseudogene","termid":"PBO:0044457"}


id: PBO:0041902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 2","termid":"PBO:0041902"}


id: GO:0097143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of PUMA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PUMA-BCL-xl complex","termid":"GO:0097143"}


id: MONDO:0015078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroenteropancreatic neuroendocrine neoplasm (obsolete MONDO:0015078)","termid":"MONDO:0015078","xrefs":{"Monarch":{"xref_id":"0015078"}}}


id: FYPO:0000231
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118910],"is_not":false,"summary":null,"term":"FYPO:0000231"}],"single_locus_phenotype":[{"annotations":[118903],"is_not":false,"summary":null,"term":"FYPO:0000231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which myosin filaments are not localized normally within the actomyosin contractile ring.","definition_xrefs":["PMID:19713940","PomBase:mah","GO:2000708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_03596":null},"genotype_count":2,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"abnormal actomyosin contractile ring myosin filament organization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_03596"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actomyosin contractile ring myosin filament organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring myosin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring myosin filament organization during vegetative growth","type":"exact"},{"name":"abnormal cytokinetic contractile ring myosin filament organization","type":"exact"},{"name":"abnormal mitotic contractile ring myosin filament organization","type":"exact"},{"name":"cytokinesis defects, contractile ring myosin distribution, defective","type":"related"}],"termid":"FYPO:0000231","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000231":null,"FYPO_EXT:0000001":null}}


id: MONDO:0019962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma primarily involving the thyroid gland.","definition_xrefs":["NCIT:C5265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid cancer","termid":"MONDO:0002108"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thyroid lymphoma","secondary_identifiers":["icd11.foundation:571063415","DOID:10011","GARD:19359","Orphanet:97285","UMLS:C1336753","MEDGEN:234947"],"synonyms":[{"name":"lymphoma of the thyroid","type":"exact"},{"name":"lymphoma of the thyroid gland","type":"exact"},{"name":"lymphoma of thyroid","type":"exact"},{"name":"lymphoma of thyroid gland","type":"exact"},{"name":"primary thyroid gland lymphoma","type":"exact"},{"name":"thyroid gland lymphoma","type":"exact"},{"name":"thyroid lymphoma","type":"exact"}],"termid":"MONDO:0019962","xrefs":{"Monarch":{"xref_id":"0019962"}}}


id: PBO:0027316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle","termid":"PBO:0027316"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: MONDO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic microphthalmia (obsolete MONDO:0000064)","termid":"MONDO:0000064","xrefs":{"Monarch":{"xref_id":"0000064"}}}


id: PBO:0081463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 333","termid":"PBO:0081463"}


id: FYPO:0007593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitophagy","termid":"FYPO:0007590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitophagy during nitrogen starvation","synonyms":[{"name":"abnormal autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"abnormal autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"abnormal autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007593"}


id: GO:0033906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 1,3-linkages between beta-D-glucuronate and N-acetyl-D-glucosamine residues in hyaluronate.","definition_xrefs":["EC:3.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hyaluronoglucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.36-RXN"],"synonyms":[{"name":"glucuronoglucosaminoglycan hyaluronate lyase activity","type":"related"},{"name":"hyaluronate 3-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"orgelase activity","type":"related"}],"termid":"GO:0033906"}


id: GO:0051785
data:
  {"annotated_genes":["SJAG_01297","SJAG_02336","SJAG_03438","SJAG_00266","SJAG_02169","SJAG_04259","SJAG_03048","SJAG_02498","SJAG_04968","SJAG_02380","SJAG_02451","SJAG_01679","SJAG_03353","SJAG_00883","SJAG_03681","SJAG_00666","SJAG_04573","SJAG_01805","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[113375,99099,103422,111544,90188,113868,107814,106784,115502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[99657,110957,97204,114367,93282,101908,101632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[88523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"positively_regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nuclear division","type":"narrow"},{"name":"stimulation of nuclear division","type":"narrow"},{"name":"up regulation of nuclear division","type":"exact"},{"name":"up-regulation of nuclear division","type":"exact"},{"name":"upregulation of nuclear division","type":"exact"}],"termid":"GO:0051785","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: FYPO:0007481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an increase in the transcription of one or more target genes that would normally occur when cells are subjected to a stress in the presence of a specific small molecule occurs to a lower extent than normal under the same circumstances.","definition_xrefs":["PMID:31932483","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule","synonyms":[{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during mitotic cell cycle","type":"related"},{"name":"attenuated increase in transcription during cellular response to stress in presence of small molecule during vegetative growth","type":"exact"}],"termid":"FYPO:0007481"}


id: PR:O14239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rax2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polarized growth protein rax2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.06c","synonyms":[{"name":"Spom972h-rax2","type":"exact"},{"name":"revert to axial protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14239"}


id: FYPO:0002617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium butyrate. Cells stop growing (and may die) at a concentration of sodium butyrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium butyrate","synonyms":[{"name":"hypersensitive to sodium butyrate","type":"exact"},{"name":"sensitive to sodium butyrate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium butyrate during vegetative growth","type":"exact"}],"termid":"FYPO:0002617"}


id: FYPO:0003916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nonsense-mediated decay","synonyms":[{"name":"abnormal NMD","type":"exact"},{"name":"abnormal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"abnormal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"abnormal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003916"}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: MONDO:0014164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TMEM231 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 11","secondary_identifiers":["GARD:15957","MEDGEN:815682","OMIM:615397","UMLS:C3809352"],"synonyms":[{"name":"MKS11","type":"related"},{"name":"Meckel syndrome caused by mutation in TMEM231","type":"exact"},{"name":"Meckel syndrome, type 11","type":"exact"},{"name":"TMEM231 Meckel syndrome","type":"exact"},{"name":"meckel syndrome 11","type":"exact"}],"termid":"MONDO:0014164","xrefs":{"Monarch":{"xref_id":"0014164"}}}


id: PATO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in an process.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process quality","secondary_identifiers":["PATO:0001239","PATO:0001240"],"synonyms":[{"name":"quality of a process","type":"exact"},{"name":"quality of occurrent","type":"exact"},{"name":"quality of process","type":"exact"},{"name":"relational quality of occurrent","type":"exact"}],"termid":"PATO:0001236"}


id: MONDO:0015600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual deficit, Cilliers type is characterized by mild intellectual deficit associated with short stature, hypergonadotropic hypogonadism, microcephaly and mild facial dysmorphism (deep-set eyes, prominent supraorbital ridges, a high nasal bridge and large ears).","definition_xrefs":["Orphanet:163971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Cilliers type","secondary_identifiers":["MEDGEN:930693","SCTID:719013004","GARD:20054","UMLS:C4305024"],"synonyms":[{"name":"X-linked intellectual disability-microcephaly-testicular failure syndrome","type":"exact"}],"termid":"MONDO:0015600","xrefs":{"Monarch":{"xref_id":"0015600"}}}


id: MONDO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any COACH syndrome in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["PMID:216360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COACH syndrome","termid":"MONDO:0100349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"COACH syndrome 2","secondary_identifiers":["GARD:16422","MEDGEN:1752166","OMIM:619111","UMLS:C5436837"],"synonyms":[{"name":"CC2D2A COACH syndrome 2","type":"exact"},{"name":"COACH2","type":"exact"}],"termid":"MONDO:0030859","xrefs":{"Monarch":{"xref_id":"0030859"}}}


id: GO:0051168
data:
  {"annotated_genes":["SJAG_04360","SJAG_03283","SJAG_05328","SJAG_04379","SJAG_02704","SJAG_04312","SJAG_03971","SJAG_04202","SJAG_01449","SJAG_00093","SJAG_03002","SJAG_01391","SJAG_02520","SJAG_00375","SJAG_02250","SJAG_04589","SJAG_04940","SJAG_03299","SJAG_04115","SJAG_00641","SJAG_01805","SJAG_01339","SJAG_04536","SJAG_00753","SJAG_01365","SJAG_00178","SJAG_01083","SJAG_00471","SJAG_02209","SJAG_04366","SJAG_02891","SJAG_04400","SJAG_04308","SJAG_02757","SJAG_03847","SJAG_04480","SJAG_01374","SJAG_04464","SJAG_04017","SJAG_03122","SJAG_04472","SJAG_04347","SJAG_03693","SJAG_04083","SJAG_03836","SJAG_01185","SJAG_01715","SJAG_03882","SJAG_04721","SJAG_03986","SJAG_04148","SJAG_01358","SJAG_01338","SJAG_02274","SJAG_01245","SJAG_01584","SJAG_03300","SJAG_03593","SJAG_01652","SJAG_01013","SJAG_04188","SJAG_04656","SJAG_03719","SJAG_03156","SJAG_02210","SJAG_02534","SJAG_00992","SJAG_03012","SJAG_02861","SJAG_01529","SJAG_00298","SJAG_01534","SJAG_04622","SJAG_04645","SJAG_02661","SJAG_03729","SJAG_01065","SJAG_02531","SJAG_04310"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100673,116872,81980,61638,75838,74558,88949,78452,79283,63227,74474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[74942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[76471,117637,71646,73146,79099,103472,74788,76225,115655,107188,118556,100921,75898,75513,74941,110001,91667,111331,109430,101389,77450,115403,110703,102177,96039,76129,82204,96452,114057,115915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[99957,93284,110594,101377],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046827"},{"annotations":[116999,73333,117638,65945,109160,65579,100675,117284,92643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006611"},{"annotations":[90508,65915,99149,77892,58977,105294,81982,90507,115829,117285,78913,64942,78416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[77893,72110,71619,81983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[91199,88469,111025,94473,99929,110004,95622,73275,104930,103473,81268,113802,100922,60812,93466,105712,78166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[77354,95623,76904,81868,93467,104608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[80347,105295,73915,104821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of substances out of the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":79,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00753":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01245":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01365":null,"SJAG_01374":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_01805":null,"SJAG_02209":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02531":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_02861":null,"SJAG_02891":null,"SJAG_03002":null,"SJAG_03012":null,"SJAG_03122":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03836":null,"SJAG_03847":null,"SJAG_03882":null,"SJAG_03971":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04188":null,"SJAG_04202":null,"SJAG_04308":null,"SJAG_04310":null,"SJAG_04312":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04400":null,"SJAG_04464":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"nuclear export","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"export from nucleus","type":"exact"},{"name":"nucleus export","type":"exact"},{"name":"substance nuclear export","type":"exact"}],"termid":"GO:0051168","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0006611":null,"GO:0016973":null,"GO:0031990":null,"GO:0046827":null,"GO:0071528":null}}


id: _global:is_magnitude_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_magnitude_of","termid":"_global:is_magnitude_of"}


id: PBO:0080668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 13","termid":"PBO:0080668"}


id: PBO:0067936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 238","termid":"PBO:0067936"}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: GO:0140984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 12) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 12). This reaction is the addition of a methyl group to the lysine residue at position 12 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0008276","GO:0016740","GO:0016741","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H4K12 methyltransferase activity","synonyms":[{"name":"histone H4 lysine 12-specific methyltransferase activity","type":"exact"},{"name":"histone H4K12 methylase activity","type":"broad"},{"name":"histone H4K12 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone methylase activity (H4-K12 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone-H4K12 methyltransferase activity","type":"exact"}],"termid":"GO:0140984"}


id: GO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + lysine in peptide = CoA + N-propionyl-lysine-peptide.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"protein propionyltransferase activity","secondary_identifiers":["RHEA:54020"],"termid":"GO:0061920"}


id: PBO:0087212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent protein methyltransferase; capable of automethylation; member of the seven beta-strand family; YNL092W is not an essential gene","termid":"PBO:0087212"}


id: GO:0070584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a mitochondrion are generated and organized.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrion morphogenesis (obsolete GO:0070584)","termid":"GO:0070584"}


id: PR:P87120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00574","PRO:DNx","PANTHER:PTHR13031:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.04c","secondary_identifiers":["UniProtKB:P87120"],"synonyms":[{"name":"Spom972h-RPP30","type":"exact"}],"termid":"PR:P87120"}


id: PBO:0066524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGP1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066524"}


id: PBO:0113113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic adaptor; K63-specific Ub-chain binding protein involved in receptor endocytosis; scaffold protein that localizes to nascent endocytic sites after homo-oligomerization and organizes the endocytic machinery; role in autophagy of aberrant clathrin-mediated endocytosis protein condensates; binds membranes in a Ub-dependent manner; interacts with and functions upstream of Cmk2p to suppress stress-induced non-apoptotic cell death; putative cytokinesis regulator;  homolog of mammalian Eps15","termid":"PBO:0113113"}


id: GO:0015803
data:
  {"annotated_genes":["SJAG_02029","SJAG_03591","SJAG_05346","SJAG_03970","SJAG_04725","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109598,102329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[87540],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[92805,98387,91220],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of branched-chain amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02029":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04725":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"branched-chain amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900755"],"synonyms":[{"name":"branched-chain aliphatic amino acid transport","type":"exact"},{"name":"branched-chain amino-acid anion transport","type":"exact"},{"name":"branched-chain amino-acid anions transport","type":"related"}],"termid":"GO:0015803","terms_by_termid":{"GO:1903714":null,"GO:1905533":null,"GO:1905534":null}}


id: PBO:0081096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 21","termid":"PBO:0081096"}


id: FYPO:0003791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"},{"relation_name":"is_a","term_name":"abnormal meiotic recombination at silent mating-type cassette","termid":"FYPO:0003346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"increased meiotic recombination at silent mating-type cassette","synonyms":[{"name":"increased meiotic recombination at mating-type region heterochromatin","type":"exact"}],"termid":"FYPO:0003791"}


id: PBO:0075941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 1","termid":"PBO:0075941"}


id: PBO:0072217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 binding protein 1","termid":"PBO:0072217"}


id: PATO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000916 absolute thickness (obsolete PATO:0000916)","termid":"PATO:0000916"}


id: PATO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000289 respiratory rate (obsolete PATO:0000289)","termid":"PATO:0000289"}


id: SO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The covalent bond between sulfur atoms that binds two peptide chains or different parts of one peptide chain and is a structural determinant in many protein molecules.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001088 disulfide_bond (obsolete SO:0001088)","synonyms":[{"name":"disulfid","type":"related"},{"name":"disulfide","type":"related"},{"name":"disulfide bond","type":"related"},{"name":"disulphide","type":"exact"},{"name":"disulphide bond","type":"related"}],"termid":"SO:0001088"}


id: PBO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-22 (pseudogene)","termid":"PBO:0051295"}


id: MOD:01605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl 2-aminoadipic acid.","definition_xrefs":["PubMed:19620981","RESID:AA0502","ChEBI:78503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl 2-aminoadipic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanedioic acid","type":"exact"},{"name":"5-glutamyl 2-aminoadipic acid","type":"exact"},{"name":"MOD_RES 5-glutamyl 2-aminoadipic acid","type":"exact"},{"name":"N2-(gamma-glutamyl)-2-aminoadipic acid","type":"exact"},{"name":"N2-(isoglutamyl)-2-aminoadipic acid","type":"exact"}],"termid":"MOD:01605"}


id: MONDO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 1","secondary_identifiers":["DOID:0060920","MEDGEN:1639517","OMIM:166800","UMLS:C4551901"],"synonyms":[{"name":"OTS","type":"related"},{"name":"OTSC1","type":"exact"},{"name":"otosclerosis 1","type":"exact"}],"termid":"MONDO:0008164","xrefs":{"Monarch":{"xref_id":"0008164"}}}


id: GO:1904040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:15514116","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:kom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transmembrane transport","termid":"GO:0034761"},{"relation_name":"is_a","term_name":"regulation of iron export across plasma membrane","termid":"GO:1904038"},{"relation_name":"positively_regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of iron export across plasma membrane","synonyms":[{"name":"activation of ferrous iron export","type":"narrow"},{"name":"activation of iron(2+) export","type":"narrow"},{"name":"positive regulation of ferrous iron export","type":"narrow"},{"name":"positive regulation of iron(2+) export","type":"narrow"},{"name":"up regulation of ferrous iron export","type":"narrow"},{"name":"up regulation of iron(2+) export","type":"narrow"},{"name":"up-regulation of ferrous iron export","type":"narrow"},{"name":"up-regulation of iron(2+) export","type":"narrow"},{"name":"upregulation of ferrous iron export","type":"narrow"},{"name":"upregulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904040"}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: GO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus activates the frequency, rate or extent of phosphorylation of host RNA polymerase II.","definition_xrefs":["PMID:7637000"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of phosphorylation of host RNA polymerase II (obsolete GO:0046793)","synonyms":[{"name":"induction by virus of modification of host RNA polymerase II","type":"broad"},{"name":"virus-induced modification of host RNA polymerase II","type":"exact"}],"termid":"GO:0046793"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: MONDO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heavy chain disease (obsolete MONDO:0000655)","termid":"MONDO:0000655","xrefs":{"Monarch":{"xref_id":"0000655"}}}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: MONDO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apocrine gland secretion, variation 1n (obsolete MONDO:0044224)","secondary_identifiers":["OMIM:117800"],"synonyms":[{"name":"Ear wax, wet/dry","type":"related"},{"name":"apocrine gland secretion, variation IN","type":"related"},{"name":"axillary odor, variation 1N","type":"related"},{"name":"axillary odor, variation in","type":"exact"},{"name":"cerumen, variation 1N","type":"related"},{"name":"colostrum secretion, variation 1N","type":"related"},{"name":"colostrum secretion, variation in","type":"exact"},{"name":"earwax, wet/dry","type":"exact"},{"name":"wet wax","type":"related"}],"termid":"MONDO:0044224","xrefs":{"Monarch":{"xref_id":"0044224"}}}


id: PBO:0040326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 1","termid":"PBO:0040326"}


id: MONDO:1010723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucocorticoid resistance that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid resistance, non-human animal","termid":"MONDO:1010113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid resistance, dog","secondary_identifiers":["OMIA:002254-9615"],"termid":"MONDO:1010723","xrefs":{"Monarch":{"xref_id":"1010723"}}}


id: MONDO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic malacoplakia associated with prostatic abscess","secondary_identifiers":["UMLS:C2931457","MEDGEN:419811","MESH:C537244"],"synonyms":[{"name":"prostatic malacoplakia with prostatic and seminal vesicle abscess","type":"related"}],"termid":"MONDO:0042705","xrefs":{"Monarch":{"xref_id":"0042705"}}}


id: GO:0009699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phenylpropanoid biosynthetic process","synonyms":[{"name":"phenylpropanoid anabolism","type":"exact"},{"name":"phenylpropanoid biosynthesis","type":"exact"},{"name":"phenylpropanoid formation","type":"exact"},{"name":"phenylpropanoid synthesis","type":"exact"}],"termid":"GO:0009699"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: MONDO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex systemic syndrome with inflammatory and autoimmune components that affect the skin, fascia, muscle, nerve, blood vessels, lung, and heart. Diagnostic features generally include eosinophilia, myalgia severe enough to limit usual activities of daily living, and the absence of coexisting infectious, autoimmune or other conditions that may induce eosinophilia. Biopsy of affected tissue reveals a microangiopathy associated with diffuse inflammation involving connective tissue. (From Spitzer et al., J Rheumatol Suppl 1996 Oct;46:73-9; Blackburn wd, Semin Arthritis Rheum 1997 Jun;26(6):788-93)","definition_xrefs":["MESH:D016603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"eosinophilia-myalgia syndrome","secondary_identifiers":["MEDGEN:38987","SCTID:95416007","ICD9:710.5","NORD:1094","EFO:1001316","UMLS:C0085179","DOID:998","GARD:6345"],"synonyms":[{"name":"EMS","type":"related"},{"name":"L-tryptophan induced EMS","type":"related"},{"name":"eosinophilia myalgia syndrome","type":"exact"},{"name":"severe muscle pain and abnormally high eosinophils","type":"related"},{"name":"syndrome with inflammatory and autoimmune components that affect the skin, fascia, muscle, nerve, blood vessels, lung, and heart","type":"related"}],"termid":"MONDO:0004941","xrefs":{"Monarch":{"xref_id":"0004941"}}}


id: PBO:0060881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 2","termid":"PBO:0060881"}


id: GO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: monodemethylisoproturon + H2O = didemethylisoproturon + formaldehyde + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0897"],"gene_count":0,"genotype_count":0,"name":"obsolete monodemethylisoproturon dimethylaminedehydrogenase activity (obsolete GO:0034572)","termid":"GO:0034572"}


id: PBO:0058045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4266","termid":"PBO:0058045"}


id: PBO:0064265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and FYVE domain containing 1","termid":"PBO:0064265"}


id: PBO:0071952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 2","termid":"PBO:0071952"}


id: GO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons within the cyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (obsolete GO:0045156)","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome bc1 complex","type":"narrow"}],"termid":"GO:0045156"}


id: PBO:0038326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_biological_role","termid":"PBO:0038326"}


id: PBO:0049694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin associated protein 1","termid":"PBO:0049694"}


id: PBO:0078321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 3","termid":"PBO:0078321"}


id: PBO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 45","termid":"PBO:0050267"}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: PBO:0066108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRF2 antisense RNA 1","termid":"PBO:0066108"}


id: MONDO:0009277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of congenital glaucoma caused by mutation(s) in the CYP1B1 gene, encoding cytochrome P450 1B1.","definition_xrefs":["NCIT:C148260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hydrophthalmos (obsolete MONDO:0006788)","termid":"MONDO:0006788"},{"relation_name":"is_a","term_name":"CYP1B1-related glaucoma with or without anterior segment dysgenesis","termid":"MONDO:0800472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3A","secondary_identifiers":["GARD:18224","DOID:11211","ICD9:743.21","OMIM:231300","MEDGEN:383912","Orphanet:98976","UMLS:C1856439"],"synonyms":[{"name":"GLC3A","type":"related"},{"name":"Primary Congenital glaucoma 3A","type":"exact"},{"name":"buphthalmos","type":"broad"},{"name":"glaucoma 3, primary congenital, A","type":"related"},{"name":"glaucoma 3, primary congenital, type a","type":"exact"},{"name":"glaucoma 3A, primary open angle, congenital, juvenile, or adult onset","type":"exact"},{"name":"glaucoma, congenital","type":"related"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset","type":"related"},{"name":"simple buphthalmos","type":"exact"}],"termid":"MONDO:0009277","xrefs":{"Monarch":{"xref_id":"0009277"}}}


id: MONDO:0014585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, low amplitude of the miniature endplate potential and current, and early-onset muscle weakness that has material basis in compound heterozygous mutation in the CHRND gene on chromosome 2q37.","definition_xrefs":["DOID:0110664","PMID:16916845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 3C","secondary_identifiers":["MEDGEN:903088","OMIM:616323","UMLS:C4225370","GARD:16086"],"synonyms":[{"name":"CMS3C","type":"related"},{"name":"congenital myasthenic syndrome 3C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome type 3C","type":"exact"},{"name":"myasthenic syndrome, congenital, 3C, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014585","xrefs":{"Monarch":{"xref_id":"0014585"}}}


id: PBO:0029452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest,_elongated_cell","termid":"PBO:0029452"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PBO:0079172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 1","termid":"PBO:0079172"}


id: PATO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity.","definition_xrefs":["PATOC:NI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level with","termid":"PATO:0002443"}


id: RO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confers_advantage_in","termid":"RO:0002322"}


id: PBO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 3","termid":"PBO:0052199"}


id: PBO:0057209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376c","termid":"PBO:0057209"}


id: GO:1901875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:21209915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of post-translational protein modification","termid":"GO:1901873"},{"relation_name":"positively_regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of post-translational protein modification","synonyms":[{"name":"activation of PTM","type":"exact"},{"name":"activation of post-translational amino acid modification","type":"exact"},{"name":"activation of post-translational modification","type":"exact"},{"name":"activation of post-translational protein modification","type":"narrow"},{"name":"activation of posttranslational amino acid modification","type":"exact"},{"name":"activation of posttranslational modification","type":"exact"},{"name":"activation of posttranslational protein modification","type":"exact"},{"name":"positive regulation of PTM","type":"exact"},{"name":"positive regulation of post-translational amino acid modification","type":"exact"},{"name":"positive regulation of post-translational modification","type":"exact"},{"name":"positive regulation of posttranslational amino acid modification","type":"exact"},{"name":"positive regulation of posttranslational modification","type":"exact"},{"name":"positive regulation of posttranslational protein modification","type":"exact"},{"name":"up regulation of PTM","type":"exact"},{"name":"up regulation of post-translational amino acid modification","type":"exact"},{"name":"up regulation of post-translational modification","type":"exact"},{"name":"up regulation of post-translational protein modification","type":"exact"},{"name":"up regulation of posttranslational amino acid modification","type":"exact"},{"name":"up regulation of posttranslational modification","type":"exact"},{"name":"up regulation of posttranslational protein modification","type":"exact"},{"name":"up-regulation of PTM","type":"exact"},{"name":"up-regulation of post-translational amino acid modification","type":"exact"},{"name":"up-regulation of post-translational modification","type":"exact"},{"name":"up-regulation of post-translational protein modification","type":"exact"},{"name":"up-regulation of posttranslational amino acid modification","type":"exact"},{"name":"up-regulation of posttranslational modification","type":"exact"},{"name":"up-regulation of posttranslational protein modification","type":"exact"},{"name":"upregulation of PTM","type":"exact"},{"name":"upregulation of post-translational amino acid modification","type":"exact"},{"name":"upregulation of post-translational modification","type":"exact"},{"name":"upregulation of post-translational protein modification","type":"exact"},{"name":"upregulation of posttranslational amino acid modification","type":"exact"},{"name":"upregulation of posttranslational modification","type":"exact"},{"name":"upregulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901875"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: GO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland development","termid":"GO:0048733"}


id: GO:0038181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a bile acid and transmitting the signal to initiate a change in cell activity. A bile acid is any member of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["PMID:10334992","PMID:12718893","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete bile acid receptor activity (obsolete GO:0038181)","termid":"GO:0038181"}


id: PR:O13759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator csx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.09c","synonyms":[{"name":"Spom972h-csx1","type":"exact"}],"termid":"PR:O13759"}


id: PBO:0088770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1","termid":"PBO:0088770"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: MONDO:1012195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, domestic cat","secondary_identifiers":["OMIA:000735-9685"],"termid":"MONDO:1012195","xrefs":{"Monarch":{"xref_id":"1012195"}}}


id: PBO:0031669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport","termid":"PBO:0031669"}


id: PR:Q9UTL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle-associated MMXD complex subunit MIP18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01940","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIP18 family protein C144.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.16","secondary_identifiers":["UniProtKB:Q9UTL0"],"synonyms":[{"name":"Spom972h-FAM96B","type":"exact"}],"termid":"PR:Q9UTL0"}


id: PBO:0116778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2I antisense RNA 1","termid":"PBO:0116778"}


id: PBO:0068877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 117, pseudogene","termid":"PBO:0068877"}


id: MONDO:0013912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the TAC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 10 with or without anosmia","secondary_identifiers":["GARD:18600","OMIM:614839","UMLS:C3553843","DOID:0090089","MEDGEN:766757","ICD10CM:E23.0"],"synonyms":[{"name":"HH10","type":"related"},{"name":"TAC3 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 10 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in TAC3","type":"exact"}],"termid":"MONDO:0013912","xrefs":{"Monarch":{"xref_id":"0013912"}}}


id: PBO:0071591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 8","termid":"PBO:0071591"}


id: PBO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member E, pseudogene","termid":"PBO:0047978"}


id: GO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell differentiation","synonyms":[{"name":"cytotoxic T cell development","type":"related"},{"name":"cytotoxic T lymphocyte selection","type":"exact"},{"name":"cytotoxic T-cell selection","type":"exact"},{"name":"cytotoxic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045065"}


id: PBO:0082152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy","termid":"PBO:0082152"}


id: PBO:0036388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AIG1 and ADTRP ortholog","termid":"PBO:0036388"}


id: GO:0046130
data:
  {"annotated_genes":["SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87035,87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside breakdown","type":"exact"},{"name":"purine ribonucleoside catabolism","type":"exact"},{"name":"purine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046130","terms_by_termid":{"GO:0006154":null}}


id: GO:0102414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-glucoside + UDP-alpha-D-glucose(2-) = quercetin-3-gentiobioside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102414)","termid":"GO:0102414"}


id: MONDO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of all four limbs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadriplegia","secondary_identifiers":["MEDGEN:19617","NCIT:C50721","ICD9:344.00","EFO:0009684","MESH:D011782","SCTID:11538006","UMLS:C0034372","ICD9:344.09","DOID:12835"],"synonyms":[{"name":"bilateral diplegia","type":"exact"},{"name":"tetraplegia","type":"exact"}],"termid":"MONDO:0001590","xrefs":{"Monarch":{"xref_id":"0001590"}}}


id: PR:Q6LA54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6LA54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.08c","synonyms":[{"name":"Spom972h-SPAC3H5.08c","type":"exact"}],"termid":"PR:Q6LA54"}


id: PBO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline, mitochondrial","termid":"PBO:0005894"}


id: PBO:0072379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a pseudogene 5","termid":"PBO:0072379"}


id: GO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of early stripe melanocyte differentiation","termid":"GO:0050939"},{"relation_name":"negatively_regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of early stripe melanocyte differentiation","synonyms":[{"name":"down regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of early stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of early stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050947"}


id: PBO:0040573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 7","termid":"PBO:0040573"}


id: PBO:0028726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_filament_polymerization_at_cell_tip","termid":"PBO:0028726"}


id: MONDO:0024781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive immunologic disorder characterized by the onset of recurrent sinopulmonary, mucosal, and other infections in early childhood, usually accompanied by refractory autoimmune cytopenias. Affected individuals have bacterial, viral, and fungal infections, as well as hemolytic anemia, thrombocytopenia, lymphopenia, and decreased NK cells. Laboratory studies show defective T-cell proliferation and function, likely due to signaling abnormalities. The disorder may also manifest as a hyperinflammatory state with immune dysregulation.","definition_xrefs":["OMIM:301082","PMID:33876203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 102","secondary_identifiers":["UMLS:C5676886","Orphanet:653751","MEDGEN:1812534"],"synonyms":[{"name":"IMD102","type":"exact"},{"name":"SASH3 deficiency","type":"exact"},{"name":"X-linked CID due to SASH3 deficiency","type":"exact"},{"name":"X-linked combined immunodeficiency due to SASH3 deficiency","type":"exact"},{"name":"immunodeficiency 102","type":"exact"}],"termid":"MONDO:0024781","xrefs":{"Monarch":{"xref_id":"0024781"}}}


id: GO:0009190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclic nucleotide biosynthetic process","synonyms":[{"name":"cyclic nucleotide anabolism","type":"exact"},{"name":"cyclic nucleotide biosynthesis","type":"exact"},{"name":"cyclic nucleotide formation","type":"exact"},{"name":"cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0009190"}


id: PBO:0087750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TIM23 translocase complex; acts to couple Tim21p with the core Tim23 translocase; provides quality control for insertion of membrane proteins by regulating their release into the inner membrane by the TIM23 complex; absolutely required for mitochondrial import of presequence-containing proteins at elevated temperature; required for viability of cells lacking the mitochondrial genome (petite-negative phenotype)","termid":"PBO:0087750"}


id: PBO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor Nxt1","termid":"PBO:0001216"}


id: FYPO:0001574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle has two poles but is otherwise structurally abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: GO:1901779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentalenolactone.","definition_xrefs":["PMID:17178094","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone catabolic process","synonyms":[{"name":"pentalenolactone breakdown","type":"exact"},{"name":"pentalenolactone catabolism","type":"exact"},{"name":"pentalenolactone degradation","type":"exact"}],"termid":"GO:1901779"}


id: GO:0051380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to norepinephrine, (3,4-dihydroxyphenyl-2-aminoethanol), a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"norepinephrine binding","synonyms":[{"name":"noradrenaline binding","type":"exact"}],"termid":"GO:0051380"}


id: PBO:0017969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase regulatory unit Ilv6 (predicted)","termid":"PBO:0017969"}


id: FYPO:0002573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22927644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Ssb1 foci","synonyms":[{"name":"increased number of RPA foci","type":"exact"},{"name":"increased number of Rad11 foci","type":"exact"},{"name":"increased number of Rpa1 foci","type":"exact"},{"name":"increased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0002573"}


id: PBO:0040292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1","termid":"PBO:0040292"}


id: GO:0010197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The merging of the polar nuclei, the two nuclei contained within the same cell that are created from the mitotic division of the megaspore during angiosperm reproduction. Polar nuclear fusion takes place in the ovule, forming in the fusion nucleus and giving rise to the endosperm when fertilized.","definition_xrefs":["GOC:sm","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polar nucleus fusion","termid":"GO:0010197"}


id: PBO:0061021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4","termid":"PBO:0061021"}


id: PBO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1","termid":"PBO:0043180"}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: PBO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECRG4 augurin precursor","termid":"PBO:0045775"}


id: MONDO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare congenital abnormality characterized by the complete absence of the penis. It may be associated with other genitourinary abnormalities.","definition_xrefs":["NCIT:C99009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penile agenesis","secondary_identifiers":["MESH:C536649","Orphanet:49","MEDGEN:278031","GARD:4272","SCTID:59981001","UMLS:C1387005"],"synonyms":[{"name":"Aphallia","type":"exact"},{"name":"Aphallus","type":"exact"},{"name":"agenesis of the penis","type":"related"},{"name":"congenital absence of penis","type":"exact"},{"name":"micropenis","type":"related"},{"name":"penis agenesia","type":"related"},{"name":"penis agenesis","type":"exact"}],"termid":"MONDO:0018846","xrefs":{"Monarch":{"xref_id":"0018846"}}}


id: PBO:0052617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 2","termid":"PBO:0052617"}


id: PBO:0080960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 3","termid":"PBO:0080960"}


id: FYPO:0001126
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119066,118981,118993],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[118907],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[118735,118767,118741,118730],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119164,119165,119171],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119170,119169],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":14,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell shape","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_02819","SJAG_01794","SJAG_04522","SJAG_04703","SJAG_00514","SJAG_04312","SJAG_03048","SJAG_00028","SJAG_04332","SJAG_03581","SJAG_00266","SJAG_02592","SJAG_03453"],"single_locus_genotype_uniquenames":["for3delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","rga6delta","ras1delta","atf1delta","pka1delta","scd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta","scd2delta","gef1delta","rga4delta"],"synonyms":[{"name":"misshapen cell","type":"related"}],"termid":"FYPO:0001126","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0084412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor; component of the protein kinase C-mediated MAP kinase pathway involved in the maintenance of cell integrity; phosphorylated and activated by the MAP-kinase Slt2p; RLM1 has a paralog, SMP1, that arose from the whole genome duplication","termid":"PBO:0084412"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: PBO:0086528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YPR014C is not an essential gene","termid":"PBO:0086528"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: GO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar ribonucleoprotein (obsolete GO:0030355)","synonyms":[{"name":"small nucleolar ribonucleoprotein","type":"exact"},{"name":"snoRNP","type":"exact"}],"termid":"GO:0030355"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: GO:0008801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate.","definition_xrefs":["EC:5.4.2.6","RHEA:20113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"beta-phosphoglucomutase activity","secondary_identifiers":["MetaCyc:BETA-PHOSPHOGLUCOMUTASE-RXN","KEGG_REACTION:R02728"],"synonyms":[{"name":"beta-D-glucose 1,6-phosphomutase activity","type":"related"}],"termid":"GO:0008801"}


id: GO:0071029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of processes involved in identifying and degrading defective or aberrant ncRNAs within the nucleus.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear ncRNA surveillance (obsolete GO:0071029)","termid":"GO:0071029"}


id: PBO:0074725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80E","termid":"PBO:0074725"}


id: MONDO:0012605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated microphthalmia in which the cause of the disease is a mutation in the MFRP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 5","secondary_identifiers":["Orphanet:251279","MEDGEN:410021","GARD:17205","MESH:C567024","OMIM:611040","UMLS:C1970236","DOID:0060837"],"synonyms":[{"name":"MCOP5","type":"exact"},{"name":"MFRP isolated microphthalmia","type":"exact"},{"name":"Nanophtalmos-retinitis pigmentosa-foveoschisis-optic disc drusen syndrome","type":"exact"},{"name":"Nanophtalmos-retinitis pigmentosa-foveoschisis-optic disk drusen syndrome","type":"exact"},{"name":"isolated microphthalmia 5","type":"exact"},{"name":"isolated microphthalmia caused by mutation in MFRP","type":"exact"},{"name":"isolated microphthalmia type 5","type":"exact"},{"name":"microphthalmia, isolated 5","type":"related"},{"name":"microphthalmia, isolated type 5","type":"exact"},{"name":"microphthalmia, posterior, with retinitis pigmentosa, foveoschisis, and optic Disc drusen","type":"related"},{"name":"microphthalmia-retinitis pigmentosa-foveoschisis-optic disc drusen syndrome","type":"exact"},{"name":"microphthalmia-retinitis pigmentosa-foveoschisis-optic disk drusen syndrome","type":"exact"},{"name":"posterior microphthalmia with retinitis pigmentosa, foveoschisis and optic disc drusen","type":"exact"},{"name":"posterior microphthalmia with retinitis pigmentosa, foveoschisis and optic disk drusen","type":"exact"}],"termid":"MONDO:0012605","xrefs":{"Monarch":{"xref_id":"0012605"}}}


id: GO:1900070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["GOC:dgf","PMID:16278455","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: PBO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb6","termid":"PBO:0090692"}


id: PBO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 2","termid":"PBO:0071396"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: PATO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000717 viability value (obsolete PATO:0000717)","termid":"PATO:0000717"}


id: GO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 long-chain alcohol + O2 = 2 long-chain aldehyde + 2 H2O.","definition_xrefs":["EC:1.1.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain-alcohol oxidase activity","secondary_identifiers":["MetaCyc:RXN-4444","RHEA:22756"],"synonyms":[{"name":"fatty alcohol oxidase activity","type":"exact"},{"name":"fatty alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"long-chain fatty acid oxidase activity","type":"related"},{"name":"long-chain fatty alcohol oxidase activity","type":"exact"},{"name":"long-chain-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0046577"}


id: PR:O14204
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtf2 gene.","definition_xrefs":["UniProtKB:O14204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5D6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.12","synonyms":[{"name":"Spom972h-mtf2","type":"exact"}],"termid":"PR:O14204"}


id: MONDO:0012392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare organic aciduria characterized by impaired isoleucine degradation with increased plasma or whole blood C5 acylcarnitine levels (typically observed in newborn screening) and increased urinary excretion of N-methylbutyrylglycine. The condition is usually clinically asymptomatic, although patients with muscular hypotonia, developmental delay, and seizures (among others) have been reported.","definition_xrefs":["Orphanet:79157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"2-methylbutyryl-CoA dehydrogenase deficiency","secondary_identifiers":["GARD:10322","MEDGEN:355324","MESH:C566487","NCIT:C98863","OMIM:610006","UMLS:C1864912"],"synonyms":[{"name":"2-methylbutyric aciduria","type":"exact"},{"name":"2-methylbutyryl Glycinuria","type":"related"},{"name":"2-methylbutyryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"2-methylbutyrylglycinuria","type":"exact"},{"name":"SBCAD deficiency","type":"exact"},{"name":"butyryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"developmental delay due to 2-methylbutyryl-CoA dehydrogenase deficiency","type":"exact"},{"name":"short branched-chain acyl-CoA dehydrogenase deficiency","type":"related"},{"name":"short/branched-chain acyl-Coa dehydrogenase deficiency","type":"related"},{"name":"short/branched-chain acyl-coA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0012392","xrefs":{"Monarch":{"xref_id":"0012392"}}}


id: MONDO:0700196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in a fish.","definition_xrefs":["NCIT:C135006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fish disease","termid":"MONDO:0024934"},{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fish melanoma","termid":"MONDO:0700196","xrefs":{"Monarch":{"xref_id":"0700196"}}}


id: PBO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase (predicted)","termid":"PBO:0002041"}


id: MONDO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of phlegmonous gastritis, typically progressing to gastric gangrene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"necrotizing gastritis","secondary_identifiers":["UMLS:C0877152","DOID:4037","MEDGEN:209092","NCIT:C27329"],"synonyms":[{"name":"necrotizing gastritis","type":"exact"}],"termid":"MONDO:0002845","xrefs":{"Monarch":{"xref_id":"0002845"}}}


id: PBO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 11","termid":"PBO:0046630"}


id: PBO:0049481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.5 linker histone, cluster member","termid":"PBO:0049481"}


id: PBO:0091594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase","termid":"PBO:0091594"}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: PBO:0040917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 21","termid":"PBO:0040917"}


id: GO:0072331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling process that is induced by the cell cycle regulator phosphoprotein p53 or an equivalent protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction by p53 class mediator","termid":"GO:0072331"}


id: PBO:0116861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor G, Gfm1/Mef1","termid":"PBO:0116861"}


id: PBO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 4","termid":"PBO:0060696"}


id: PBO:0082237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the first step in the leucine biosynthesis pathway; LEU4 has a paralog, LEU9, that arose from the whole genome duplication","termid":"PBO:0082237"}


id: PBO:0046570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 12","termid":"PBO:0046570"}


id: PBO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein Igo1 (predicted)","termid":"PBO:0000860"}


id: GO:0032096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to food","termid":"GO:0032095"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to food","synonyms":[{"name":"down regulation of response to food","type":"exact"},{"name":"down-regulation of response to food","type":"exact"},{"name":"downregulation of response to food","type":"exact"},{"name":"inhibition of response to food","type":"narrow"}],"termid":"GO:0032096"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: MONDO:0012112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 10","secondary_identifiers":["UMLS:C1834460","DOID:0110316","MEDGEN:331754","MESH:C563865","OMIM:608758"],"synonyms":[{"name":"CMH10","type":"exact"},{"name":"MYL2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 10","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 10","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 10","type":"exact"},{"name":"cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 2","type":"related"},{"name":"hypertrophic cardiomyopathy 10","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYL2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 10","type":"exact"}],"termid":"MONDO:0012112","xrefs":{"Monarch":{"xref_id":"0012112"}}}


id: MONDO:1011812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, non-human animal","secondary_identifiers":["OMIA:000735"],"termid":"MONDO:1011812","xrefs":{"Monarch":{"xref_id":"1011812"}}}


id: PBO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5A","termid":"PBO:0052354"}


id: PBO:0067213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 279, pseudogene","termid":"PBO:0067213"}


id: PR:Q76PD3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX51 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24031:SF18","PRO:DNx","OMA:SCHPO04831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.03","secondary_identifiers":["UniProtKB:Q76PD3"],"synonyms":[{"name":"Spom972h-DDX51","type":"exact"}],"termid":"PR:Q76PD3"}


id: PBO:0054999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2414","termid":"PBO:0054999"}


id: PBO:0014279
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET3","termid":"PBO:0014279"}


id: PATO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's shape being a V-shaped cut.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notched","synonyms":[{"name":"indented","type":"related"}],"termid":"PATO:0001495"}


id: GO:0015419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sulfate(out) = ADP + phosphate + sulfate(in).","definition_xrefs":["RHEA:10192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type sulfate transporter activity","secondary_identifiers":["MetaCyc:ABC-70-RXN"],"synonyms":[{"name":"ATPase-coupled sulfate transmembrane transporter activity","type":"related"},{"name":"sulfate ABC transporter","type":"exact"},{"name":"sulfate transmembrane-transporting ATPase activity","type":"related"},{"name":"sulfate-transporting ATPase activity","type":"related"},{"name":"sulfate/thiosulfate porter activity","type":"broad"},{"name":"sulphate transporting ATPase activity","type":"related"}],"termid":"GO:0015419"}


id: PBO:0064172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group VI","termid":"PBO:0064172"}


id: MONDO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival deposit","termid":"MONDO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival concretion","secondary_identifiers":["UMLS:C0155162","MEDGEN:509822","DOID:11988","ICD9:372.54","SCTID:13706005"],"termid":"MONDO:0001412","xrefs":{"Monarch":{"xref_id":"0001412"}}}


id: PBO:0028824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology","termid":"PBO:0028824"}


id: GO:0070001
data:
  {"annotated_genes":["SJAG_04583","SJAG_00254","SJAG_03763","SJAG_02260","SJAG_00109","SJAG_03420","SJAG_00784","SJAG_01968"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"},{"annotations":[70899,73590,74926,81686,77716,60612,71562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004190"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00109":null,"SJAG_00254":null,"SJAG_00784":null,"SJAG_01968":null,"SJAG_02260":null,"SJAG_03420":null,"SJAG_03763":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0008233","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartic-type peptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0070001","terms_by_termid":{"GO:0004190":null,"GO:0042500":null}}


id: MONDO:0015134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by recurrent infantile infections and absence of neutrophils in the peripheral blood.","definition_xrefs":["NCIT:C61242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"constitutional neutropenia","secondary_identifiers":["GARD:19809","ICD10CM:D70","icd11.foundation:87096615","Orphanet:101987","MEDGEN:1785816","UMLS:C3805116"],"synonyms":[{"name":"Kostmann disease","type":"narrow"},{"name":"Kostmann neutropenia","type":"narrow"},{"name":"Kostmann syndrome","type":"narrow"},{"name":"congenital neutropenia","type":"exact"},{"name":"genetic infantile agranulocytosis","type":"exact"},{"name":"infantile genetic agranulocytosis","type":"exact"}],"termid":"MONDO:0015134","xrefs":{"Monarch":{"xref_id":"0015134"}}}


id: MONDO:0021364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of oropharynx","secondary_identifiers":["MEDGEN:14519","SCTID:126809003","UMLS:C0029295","NCIT:C3291"],"synonyms":[{"name":"neoplasm of oropharynx","type":"exact"},{"name":"neoplasm of the oropharynx","type":"exact"},{"name":"oropharyngeal neoplasm","type":"exact"},{"name":"oropharyngeal neoplasms","type":"exact"},{"name":"oropharyngeal tumor","type":"exact"},{"name":"oropharyngeal tumour","type":"exact"},{"name":"oropharynx neoplasm","type":"exact"},{"name":"oropharynx neoplasm (disease)","type":"exact"},{"name":"oropharynx tumor","type":"exact"},{"name":"oropharynx tumour","type":"exact"},{"name":"tumor of oropharynx","type":"exact"},{"name":"tumor of the oropharynx","type":"exact"},{"name":"tumour of oropharynx","type":"exact"},{"name":"tumour of the oropharynx","type":"exact"}],"termid":"MONDO:0021364","xrefs":{"Monarch":{"xref_id":"0021364"}}}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: PBO:0089598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase Thi201","termid":"PBO:0089598"}


id: PBO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds d(GTT)n","termid":"PBO:0002499"}


id: MOD:00586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to pyridyl thiol","synonyms":[{"name":"PET","type":"related"},{"name":"phosphorylation to pyridyl thiol","type":"related"}],"termid":"MOD:00586"}


id: PBO:0067759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 59","termid":"PBO:0067759"}


id: MONDO:0054780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary elliptocytosis","termid":"MONDO:0017319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"elliptocytosis 3","secondary_identifiers":["MEDGEN:357139","MESH:C566678","OMIM:617948","UMLS:C1866810","GARD:16273"],"synonyms":[{"name":"EL3","type":"related"},{"name":"anemia, neonatal hemolytic, fatal or near-fatal","type":"exact"},{"name":"anemia, perinatal hemolytic, fatal or near-fatal","type":"related"},{"name":"elliptocytosis 3","type":"exact"},{"name":"elliptocytosis-3","type":"exact"}],"termid":"MONDO:0054780","xrefs":{"Monarch":{"xref_id":"0054780"}}}


id: PBO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp3","termid":"PBO:0002649"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: MONDO:0859361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and ischiopubic hypoplasia","secondary_identifiers":["OMIM:620210","UMLS:C5774298","MEDGEN:1824071"],"termid":"MONDO:0859361","xrefs":{"Monarch":{"xref_id":"0859361"}}}


id: PBO:0080493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C domain containing 2 like","termid":"PBO:0080493"}


id: PBO:0055140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2559","termid":"PBO:0055140"}


id: PBO:0081836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 771","termid":"PBO:0081836"}


id: FYPO:0009000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which cytoplasmic microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mlr","PMID:36633091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule polymerization during vegetative growth","termid":"FYPO:0005703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of cytoplasmic microtubule polymerization during mitotic interphase","synonyms":[{"name":"decreased cytoplasmic microtubule growth rate during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule growth speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerisation speed during mitotic interphase","type":"exact"},{"name":"decreased cytoplasmic microtubule polymerization speed during mitotic interphase","type":"exact"},{"name":"decreased rate of cytoplasmic microtubule polymerisation during mitotic interphase","type":"exact"}],"termid":"FYPO:0009000"}


id: PBO:0089604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosomal large subunit assembly and maintenance","termid":"PBO:0089604"}


id: MONDO:1010891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in sheep due to a mutation in the PPT1 gene created using CRISPR/Cas9 gene editing.","definition_xrefs":["OMIA:001504-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, sheep","termid":"MONDO:1011578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, PPT1-related, sheep","synonyms":[{"name":"neuronal ceroid lipofuscinosis, 1, sheep","type":"related"}],"termid":"MONDO:1010891","xrefs":{"Monarch":{"xref_id":"1010891"}}}


id: PBO:0072659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 1","termid":"PBO:0072659"}


id: GO:0061116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis process in which the ductus venosus changes to no longer permit blood flow after birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ductus venosus closure","termid":"GO:0061116"}


id: GO:0031096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the platelet dense tubular network.","definition_xrefs":["GOC:mah","PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"platelet dense tubular network","termid":"GO:0031094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network lumen","termid":"GO:0031096"}


id: GO:0140668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"positively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of oxytocin production","termid":"GO:0140668"}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: MONDO:0015426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desbuquois syndrome (DBQD) is an osteochondrodysplasia characterized by severe micromelic dwarfism, facial dysmorphism, joint laxity with multiple dislocations, vertebral and metaphyseal abnormalities and advanced carpotarsal ossification. Two forms have been distinguished on the basis of the presence (type 1) or the absence (type 2) of characteristic hand anomalies. A variant form of DBQD, Kim variant, has also been described and is characterized by short stature and articular, minor facial and significant hand anomalies.","definition_xrefs":["Orphanet:1425"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia","secondary_identifiers":["ICD9:756.9","MEDGEN:98479","GARD:1818","DOID:0060462","OMIMPS:251450","NCIT:C124056","SCTID:254099008","UMLS:C0432242"],"synonyms":[{"name":"DBQD","type":"exact"},{"name":"Desbuquois dysplasia","type":"exact"},{"name":"desbuquois syndrome","type":"exact"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"exact"},{"name":"micromelic dwarfism, narrow chest, vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0015426","xrefs":{"Monarch":{"xref_id":"0015426"}}}


id: GO:0140074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac endothelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. Endocardial cells (specialized endothelial cells that line the heart) undergo EndMT, and give rise to mesenchymal cells necessary for proper heart development. EndMT, specifically generates valve progenitor cells that give rise to the mitral and tricuspid valves. EndMT also contributes to endocardial cushion formation, as well as to generation of cardiac fibroblasts and smooth muscle cells, but not cardiac myocytes.","definition_xrefs":["GOC:nc","GOC:BHF","PMID:16162442","PMID:26053665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial to mesenchymal transition","synonyms":[{"name":"EndMT","type":"exact"},{"name":"EndoMT","type":"exact"}],"termid":"GO:0140074"}


id: PBO:0065569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin I2 synthase","termid":"PBO:0065569"}


id: MONDO:0015097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve dysplasia","secondary_identifiers":["GARD:19776","ICD9:746.89","SCTID:253604004","MEDGEN:576679","UMLS:C0344993","Orphanet:101043"],"termid":"MONDO:0015097","xrefs":{"Monarch":{"xref_id":"0015097"}}}


id: PBO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1","termid":"PBO:0003278"}


id: PBO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member K","termid":"PBO:0048916"}


id: FYPO:0007494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of beta-D-glucan measured in the spore wall is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall beta-glucan level","termid":"FYPO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased ascospore wall beta-glucan level","synonyms":[{"name":"increased ascospore wall beta-D-glucan level","type":"exact"},{"name":"increased ascospore wall beta-glucan accumulation","type":"related"},{"name":"increased ascospore wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased ascospore wall beta-glucan level during vegetative growth","type":"exact"},{"name":"increased spore wall beta-glucan level","type":"exact"}],"termid":"FYPO:0007494"}


id: FYPO:0001826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished sodium export","synonyms":[{"name":"abolished sodium export during mitotic cell cycle","type":"related"},{"name":"abolished sodium export from cell","type":"exact"},{"name":"abolished sodium ion export","type":"exact"},{"name":"sodium export abolished","type":"exact"},{"name":"sodium export abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001826"}


id: PBO:0091525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A","termid":"PBO:0091525"}


id: PBO:0056861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 1","termid":"PBO:0056861"}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["MEDGEN:334136","OMIM:608031","UMLS:C1842674","DOID:0060199","MESH:C564300","GARD:10500"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: PBO:0039660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP2B1 pseudogene 1","termid":"PBO:0039660"}


id: MONDO:0014871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the AGBL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 75","secondary_identifiers":["ICD10CM:H35.5","UMLS:C4310759","MEDGEN:934726","DOID:0110361","OMIM:617023","GARD:16176"],"synonyms":[{"name":"AGBL5 retinitis pigmentosa","type":"exact"},{"name":"RP75","type":"exact"},{"name":"retinitis pigmentosa 75","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in AGBL5","type":"exact"},{"name":"retinitis pigmentosa type 75","type":"exact"}],"termid":"MONDO:0014871","xrefs":{"Monarch":{"xref_id":"0014871"}}}


id: PBO:0029750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation","termid":"PBO:0029750"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["EC:3.5.1.40","RHEA:15065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["MetaCyc:ACYLAGMATINE-AMIDASE-RXN","KEGG_REACTION:R01425"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: MONDO:0700150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor composed of mast cells that occurs in dogs.","definition_xrefs":["NCIT:C129077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell tumor, dog","termid":"MONDO:1011555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine mastocytoma","termid":"MONDO:0700150","xrefs":{"Monarch":{"xref_id":"0700150"}}}


id: PBO:0083554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W","termid":"PBO:0083554"}


id: MONDO:0044976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of catalytic activity (obsolete MONDO:0044976)","secondary_identifiers":["SCTID:78548001"],"synonyms":[{"name":"enzyme disorder","type":"exact"},{"name":"enzymopathy","type":"exact"}],"termid":"MONDO:0044976","xrefs":{"Monarch":{"xref_id":"0044976"}}}


id: FYECO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the duration or frequency of one or more steps in a protocol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth timing","termid":"FYECO:0000122"}


id: MONDO:0020804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving the basal cells.","definition_xrefs":["NCIT:C156767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"basal cell neoplasm","termid":"MONDO:0020799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal cell carcinoma","secondary_identifiers":["NCIT:C7586","MEDGEN:2870","UMLS:C0007117","MESH:D002280","EFO:0004193"],"synonyms":[{"name":"basal cell cancer","type":"exact"},{"name":"epithelioma, basal cell","type":"exact"},{"name":"malignant basal cell neoplasm","type":"exact"}],"termid":"MONDO:0020804","xrefs":{"Monarch":{"xref_id":"0020804"}}}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: GO:0010622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an ovule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"plant ovule morphogenesis","termid":"GO:0048482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ovule identity","termid":"GO:0010622"}


id: MONDO:1012142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple lipomatosis, non-human animal","termid":"MONDO:1011809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple lipomatosis, pig","secondary_identifiers":["OMIA:000606-9823"],"termid":"MONDO:1012142","xrefs":{"Monarch":{"xref_id":"1012142"}}}


id: MONDO:0018415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hymenolepiasis (obsolete MONDO:0018415)","termid":"MONDO:0018415","xrefs":{"Monarch":{"xref_id":"0018415"}}}


id: PBO:0067254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 328, pseudogene","termid":"PBO:0067254"}


id: PBO:0045277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 28","termid":"PBO:0045277"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: PBO:0074763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1A","termid":"PBO:0074763"}


id: PBO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 4","termid":"PBO:0049221"}


id: MONDO:0005207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant tumor arising from trophoblastic cells. The vast majority of cases arise in the uterus and represent gestational choriocarcinomas that derive from placental trophoblastic cells. Approximately half of the cases develop from a complete hydatidiform mole. A minority of cases arise in the testis or the ovaries. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.","definition_xrefs":["NCIT:C2948"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"placenta cancer","termid":"MONDO:0002178"},{"relation_name":"excluded_subClassOf","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choriocarcinoma","secondary_identifiers":["DOID:3594","ICDO:9100/3","NANDO:2200070","MEDGEN:40278","EFO:0002893","MESH:D002822","ONCOTREE:BCCA","GARD:6059","HP:0100768","SCTID:188188009","UMLS:C0008497"],"synonyms":[{"name":"chorioblastoma","type":"exact"},{"name":"choriocarcinoma","type":"exact"},{"name":"choriocarcinoma (disease)","type":"exact"},{"name":"choriocarcinoma, malignant","type":"exact"},{"name":"chorioepithelioma","type":"exact"},{"name":"chorion carcinoma","type":"exact"},{"name":"chorionic carcinoma","type":"exact"}],"termid":"MONDO:0005207","xrefs":{"Monarch":{"xref_id":"0005207"}}}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: MONDO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A chondrosarcoma that is located in exclusively soft tissue.","definition_xrefs":["DOID:4549","PMID:16084955"],"gene_count":0,"genotype_count":0,"name":"obsolete extraosseous chondrosarcoma (obsolete MONDO:0003044)","termid":"MONDO:0003044","xrefs":{"Monarch":{"xref_id":"0003044"}}}


id: MONDO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insulitis is an inflammatory infiltration of the islets of Langerhans found especially in young patients with recent onset type 1 diabetes.","definition_xrefs":["EFO:0002498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"aggressive insulitis","termid":"MONDO:0005175","xrefs":{"Monarch":{"xref_id":"0005175"}}}


id: MONDO:0024338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous neoplasm","secondary_identifiers":["NCIT:C7070","UMLS:C1334811","MEDGEN:235339"],"synonyms":[{"name":"mucinous neoplasm","type":"exact"},{"name":"mucinous tumor","type":"exact"},{"name":"mucinous tumour","type":"exact"}],"termid":"MONDO:0024338","xrefs":{"Monarch":{"xref_id":"0024338"}}}


id: PBO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 16","termid":"PBO:0072199"}


id: PBO:0054228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1610","termid":"PBO:0054228"}


id: MONDO:0008639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular helix of umbilical cord","secondary_identifiers":["UMLS:C1860520","OMIM:192300","MEDGEN:349836"],"synonyms":[{"name":"vascular helix of umbilical cord","type":"exact"}],"termid":"MONDO:0008639","xrefs":{"Monarch":{"xref_id":"0008639"}}}


id: PBO:0086575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p","termid":"PBO:0086575"}


id: PBO:0070807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 37","termid":"PBO:0070807"}


id: GO:1990215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vesicle-mediated transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24248335","PMID:30893609","PMID:31492901","PMID:22319451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vesicle-mediated transport","synonyms":[{"name":"negative regulation by symbiont of host intracellular transport","type":"broad"},{"name":"symbiont-mediated perturbation of host endosomal trafficking","type":"related"}],"termid":"GO:1990215"}


id: PBO:0003052
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Ccc1-Like","termid":"PBO:0003052"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: GO:0018983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.","definition_xrefs":["UM-BBD_pathwayID:pao"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldoxime metabolic process","termid":"GO:0019330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime metabolic process","synonyms":[{"name":"Z-phenylacetaldoxime metabolism","type":"exact"}],"termid":"GO:0018983"}


id: MONDO:0020234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete craniofacial anomaly with cataract (obsolete MONDO:0020234)","secondary_identifiers":["Orphanet:98650"],"termid":"MONDO:0020234","xrefs":{"Monarch":{"xref_id":"0020234"}}}


id: GO:0034937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perchlorate + 2 H+ + 2 e- = chlorate + H2O.","definition_xrefs":["UM-BBD_reactionID:r0980"],"gene_count":0,"genotype_count":0,"name":"obsolete perchlorate reductase activity (obsolete GO:0034937)","termid":"GO:0034937"}


id: MOD:00399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetic acid, usually replacement of a reactive hydrogen with a methylcarboxy group.","definition_xrefs":["Unimod:6","DeltaMass:64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid derivatized residue","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl (on Cysteine)","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:00399"}


id: PBO:0082916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome b reductase and NADH-dependent reductase for Dph3p; required for diphthamide synthesis and tRNA wobble uridine modification; also detected in mitochondria; mutation in conserved NADH binding domain of the human ortholog results in type I methemoglobinemia","termid":"PBO:0082916"}


id: PBO:0078901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 10-1","termid":"PBO:0078901"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: GO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in positive regulation of wound healing.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of wound healing (obsolete GO:0044330)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of wound healing","type":"exact"}],"termid":"GO:0044330"}


id: PBO:0054716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2125","termid":"PBO:0054716"}


id: MONDO:0022414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete allain-babin-demarquez syndrome (obsolete MONDO:0022414)","secondary_identifiers":["Orphanet:1526"],"synonyms":[{"name":"acro cephalo synostosis","type":"related"},{"name":"craniosynostosis synostoses hypertensive nephropathy","type":"related"}],"termid":"MONDO:0022414","xrefs":{"Monarch":{"xref_id":"0022414"}}}


id: PBO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 65","termid":"PBO:0050362"}


id: PBO:0070349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 22","termid":"PBO:0070349"}


id: PBO:0012590
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human NF1","termid":"PBO:0012590"}


id: GO:0060327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell from one place to another.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}


id: GO:0005870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer consisting of alpha and beta subunits that binds to and caps the barbed ends of actin filaments, nucleates the polymerization of actin monomers but does not sever actin filaments, and which is a part of the dynactin complex.","definition_xrefs":["PMID:18544499","PMID:18221362","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"F-actin capping protein complex","termid":"GO:0008290"},{"relation_name":"part_of","term_name":"dynactin complex","termid":"GO:0005869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin capping protein of dynactin complex","termid":"GO:0005870"}


id: GO:0047781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + citrulline = NH3 + CO2 + L-ornithine.","definition_xrefs":["MetaCyc:CITRULLINASE-RXN","EC:3.5.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"citrullinase activity","secondary_identifiers":["RHEA:11940"],"synonyms":[{"name":"L-citrulline 5-N-carbamoyldihydrolase activity","type":"related"},{"name":"L-citrulline N5-carbamoyldihydrolase activity","type":"related"},{"name":"citrulline hydrolase activity","type":"related"},{"name":"citrulline ureidase activity","type":"related"}],"termid":"GO:0047781"}


id: GO:1902900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a gut granule.","definition_xrefs":["GOC:TermGenie","PMID:17202409","GO_REF:0000079","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"gut granule assembly","synonyms":[{"name":"gut granule biogenesis","type":"exact"},{"name":"gut granule formation","type":"exact"}],"termid":"GO:1902900"}


id: GO:0035019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell population maintenance","secondary_identifiers":["Reactome:R-HSA-452723"],"termid":"GO:0035019"}


id: PBO:0111517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 78","termid":"PBO:0111517"}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: PBO:0088390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase","termid":"PBO:0088390"}


id: PBO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar phosphatase (predicted)","termid":"PBO:0002403"}


id: MONDO:0012697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 7","secondary_identifiers":["MEDGEN:409738","DOID:0060925","MESH:C566913","OMIM:611572","UMLS:C1969044"],"synonyms":[{"name":"OTSC7","type":"exact"},{"name":"otosclerosis 7","type":"exact"}],"termid":"MONDO:0012697","xrefs":{"Monarch":{"xref_id":"0012697"}}}


id: GO:1902803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GOC:kmv","PMID:23527112","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of synaptic vesicle transport","synonyms":[{"name":"regulation of synaptic vesicle fission","type":"related"},{"name":"regulation of synaptic vesicle fusion","type":"related"}],"termid":"GO:1902803"}


id: MONDO:0014262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loeys-Dietz syndrome-5 (LDS5), also known as Rienhoff (pronounced REENhoff) syndrome, is characterized by syndromic presentation of aortic aneurysms involving the thoracic and/or abdominal aorta, with risk of dissection and rupture. Other systemic features include cleft palate, bifid uvula, mitral valve disease, skeletal overgrowth, cervical spine instability, and clubfoot deformity; however, not all clinical features occur in all patients. In contrast to other forms of LDS, no striking aortic or arterial tortuosity is present in these patients, and there is no strong evidence for early aortic dissection.","definition_xrefs":["EFO:1000012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Rienhoff syndrome","secondary_identifiers":["GARD:12356","UMLS:C3810012","DOID:0070236","OMIM:615582","MEDGEN:816342"],"synonyms":[{"name":"LDS5","type":"related"},{"name":"Loeys-Dietz syndrome 5","type":"related"},{"name":"Loeys-Dietz syndrome type 5","type":"exact"},{"name":"Rienhoff syndrome","type":"exact"}],"termid":"MONDO:0014262","xrefs":{"Monarch":{"xref_id":"0014262"}}}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: PBO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 30","termid":"PBO:0080044"}


id: PBO:0059864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 1","termid":"PBO:0059864"}


id: GO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a protein-DNA-RNA complex into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"}


id: GO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion development","termid":"GO:0003197"}


id: PBO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 2","termid":"PBO:0052119"}


id: GO:0002792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"negatively_regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptide secretion","synonyms":[{"name":"down regulation of peptide secretion","type":"exact"},{"name":"down-regulation of peptide secretion","type":"exact"},{"name":"downregulation of peptide secretion","type":"exact"},{"name":"inhibition of peptide secretion","type":"narrow"}],"termid":"GO:0002792"}


id: FYPO:0001854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to iron ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during cellular response to iron","synonyms":[{"name":"increased transcription during cellular response to iron during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to iron during vegetative growth","type":"exact"},{"name":"increased transcription during cellular response to iron ion","type":"exact"},{"name":"increased transcription during cellular response to iron ions","type":"exact"}],"termid":"FYPO:0001854"}


id: GO:1905914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["PMID:22362515","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:BHF_miRNA","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"positively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion export across plasma membrane","synonyms":[{"name":"activation of calcium ion efflux from cell","type":"narrow"},{"name":"activation of calcium ion export from cell","type":"narrow"},{"name":"positive regulation of calcium ion efflux from cell","type":"exact"},{"name":"positive regulation of calcium ion export from cell","type":"exact"},{"name":"up regulation of calcium ion efflux from cell","type":"exact"},{"name":"up regulation of calcium ion export from cell","type":"exact"},{"name":"up-regulation of calcium ion efflux from cell","type":"exact"},{"name":"up-regulation of calcium ion export from cell","type":"exact"},{"name":"upregulation of calcium ion efflux from cell","type":"exact"},{"name":"upregulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905914"}


id: PBO:0028236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_meiosis_I","termid":"PBO:0028236"}


id: _global:interaction_double_mutant_genotype
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_double_mutant_genotype","termid":"_global:interaction_double_mutant_genotype"}


id: GO:0032035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin II heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin II heavy chain binding","termid":"GO:0032038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"myosin II tail binding","termid":"GO:0032035"}


id: SO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A linear clone derived from lambda bacteriophage. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000160 lambda_clone (obsolete SO:0000160)","termid":"SO:0000160"}


id: PBO:0073278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 12","termid":"PBO:0073278"}


id: MONDO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the paranasal sinus.","definition_xrefs":["NCIT:C6849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus sarcoma","secondary_identifiers":["UMLS:C1335342","DOID:1362","MEDGEN:233842"],"synonyms":[{"name":"accessory sinus sarcoma","type":"exact"},{"name":"paranasal sinus sarcoma","type":"exact"},{"name":"sarcoma of accessory sinus","type":"exact"},{"name":"sarcoma of paranasal sinus","type":"exact"},{"name":"sarcoma of the accessory sinus","type":"exact"},{"name":"sarcoma of the paranasal sinus","type":"exact"}],"termid":"MONDO:0001758","xrefs":{"Monarch":{"xref_id":"0001758"}}}


id: FYPO:0007570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling takes place at both mitotic spindle pole bodies. Normally, SIN signaling occurs only at the new SPB.","definition_xrefs":["PMID:15132994","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"septation initiation network signaling from both mitotic spindle pole bodies","synonyms":[{"name":"SIN signaling from both mitotic SPBs","type":"exact"},{"name":"SIN signaling from both mitotic spindle pole bodies","type":"exact"},{"name":"abnormal septation initiation network signaling from both mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation network signaling from both mitotic SPBs","type":"exact"},{"name":"septation initiation network signaling from both mitotic spindle pole bodies during mitotic cell cycle","type":"related"},{"name":"septation initiation network signaling from both mitotic spindle pole bodies during vegetative growth","type":"exact"},{"name":"septation initiation network signaling from old and new mitotic SPBs","type":"exact"},{"name":"septation initiation network signaling from old and new mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation network signalling from both mitotic spindle pole bodies","type":"exact"},{"name":"septation initiation signaling from both mitotic spindle pole bodies","type":"exact"}],"termid":"FYPO:0007570"}


id: PBO:0059393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S26","termid":"PBO:0059393"}


id: GO:0045962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and increases the rate at which this time point is reached.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of development, heterochronic","synonyms":[{"name":"activation of development, heterochronic","type":"narrow"},{"name":"stimulation of development, heterochronic","type":"narrow"},{"name":"up regulation of development, heterochronic","type":"exact"},{"name":"up-regulation of development, heterochronic","type":"exact"},{"name":"upregulation of development, heterochronic","type":"exact"}],"termid":"GO:0045962"}


id: PBO:0034490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore,_lagging_chromosomes,_and_normal_chromosome_separation","termid":"PBO:0034490"}


id: GO:1901489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of transcription factor catabolism in response to decreased oxygen levels, which results in positive regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels (obsolete GO:1901489)","synonyms":[{"name":"positive regulation of SREBP signaling by inhibition of SREBP degradation in response to decreased oxygen levels","type":"exact"},{"name":"positive regulation of SREBP signaling by negative regulation of transcription factor catabolism at low oxygen levels","type":"exact"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of SREBP degradation, in response to decreased oxygen","type":"narrow"},{"name":"positive regulation of SREBP-mediated signaling pathway in absence of oxygen by negative regulation of transcription factor catabolic process","type":"related"},{"name":"positive regulation of SREBP-mediated signaling pathway in response to decreased oxygen levels by negative regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901489"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: GO:0008203
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77263],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cholesterol metabolism","type":"exact"}],"termid":"GO:0008203","terms_by_termid":{"GO:0045540":null}}


id: GO:0048357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"pedicel mucilage metabolic process","termid":"GO:0048362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage biosynthetic process","synonyms":[{"name":"pedicel mucilage anabolism","type":"exact"},{"name":"pedicel mucilage biosynthesis","type":"exact"},{"name":"pedicel mucilage formation","type":"exact"},{"name":"pedicel mucilage synthesis","type":"exact"}],"termid":"GO:0048357"}


id: MONDO:0006591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the subcutaneous adipose tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"fibromyalgia","termid":"MONDO:0005546"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panniculitis","secondary_identifiers":["icd11.foundation:1056888958","ICD9:729.3","ICD9:729.30","ICD9:729.39","UMLS:C0030326","NCIT:C33645","Wikipedia:Panniculitis","MESH:D015434","DOID:1526","EFO:1000746","SCTID:22125009","MEDGEN:45301"],"synonyms":[{"name":"Subcutaneous adipose tissue","type":"exact"},{"name":"Subcutaneous tissue","type":"exact"},{"name":"inflammation of subcutaneous adipose tissue","type":"exact"},{"name":"subcutaneous adipose tissue inflammation","type":"exact"},{"name":"subcutis","type":"exact"}],"termid":"MONDO:0006591","xrefs":{"Monarch":{"xref_id":"0006591"}}}


id: GO:0048015
data:
  {"annotated_genes":["SJAG_04537","SJAG_01519","SJAG_00321","SJAG_00114","SJAG_05330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73321,73534,74507,92700,95425],"is_not":false,"summary":null,"term":"GO:0048015"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.","definition_xrefs":["ISBN:0198506732","GOC:ceb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00321":null,"SJAG_01519":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inositol phospholipid-mediated signaling","type":"broad"},{"name":"phosphatidylinositol-mediated signal transduction","type":"exact"},{"name":"phosphatidylinositol-mediated signalling","type":"exact"},{"name":"phosphoinositide-mediated signaling","type":"exact"},{"name":"phosphoinositide-mediated signalling","type":"exact"}],"termid":"GO:0048015","terms_by_termid":{"GO:0048015":null}}


id: GO:0010936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"negatively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage cytokine production","termid":"GO:0010936"}


id: PBO:0059221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 3, pseudogene","termid":"PBO:0059221"}


id: PBO:0014609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex corepressor nrm1","termid":"PBO:0014609"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: PBO:0080347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 111 pseudogene","termid":"PBO:0080347"}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: PBO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog","termid":"PBO:0003981"}


id: GO:0018386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The condensation of pyruvate through the 2-oxo group with the N-terminal cysteine of proteins to form the derivative N-pyruvic acid 2-iminyl-L-cysteine.","definition_xrefs":["RESID:AA0274"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-cysteine condensation with pyruvate to form N-pyruvic acid 2-iminyl-L-cysteine (obsolete GO:0018386)","termid":"GO:0018386"}


id: PBO:0059527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 16S rRNA","termid":"PBO:0059527"}


id: PBO:0028899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028899"}


id: GO:0140802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal glycine + NAD+ = [protein]-C-terminal O-(ADP-D-ribosyl)-glycine + nicotinamide.","definition_xrefs":["PMID:28525742","RHEA:58268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140096","GO:0016757"],"is_obsolete":false,"name":"NAD+-protein-C-terminal glycine ADP-ribosyltransferase activity","termid":"GO:0140802"}


id: GO:0047128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticuline + NADP+ = 1,2-dehydroreticuline + H+ + NADPH.","definition_xrefs":["RHEA:17569","EC:1.5.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-dehydroreticulinium reductase (NADPH) activity","secondary_identifiers":["MetaCyc:1.5.1.27-RXN","KEGG_REACTION:R04695"],"synonyms":[{"name":"(R)-reticuline:NADP+ oxidoreductase activity","type":"related"},{"name":"1,2-dehydroreticulinium ion reductase activity","type":"related"}],"termid":"GO:0047128"}


id: GO:0006729
data:
  {"annotated_genes":["SJAG_03275","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71639,108084],"is_not":false,"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process","termid":"GO:0046146"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"tetrahydrobiopterin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"5,6,7,8-tetrahydrobiopterin biosynthetic process","type":"exact"},{"name":"tetrahydrobiopterin anabolism","type":"exact"},{"name":"tetrahydrobiopterin biosynthesis","type":"exact"},{"name":"tetrahydrobiopterin formation","type":"exact"},{"name":"tetrahydrobiopterin synthesis","type":"exact"}],"termid":"GO:0006729","terms_by_termid":{"GO:0006729":null}}


id: PBO:0030145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leptomycin_B","termid":"PBO:0030145"}


id: GO:1990053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 5-methylcytosine + H2O = DNA with abasic site + 5-methylcytosine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the DNA 5-methylcytosine and the deoxyribose sugar to remove the 5-methylcytosine, leaving an abasic site.","definition_xrefs":["PMID:23316050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA-5-methylcytosine glycosylase activity","termid":"GO:1990053"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: GO:0061845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The location where a secondary projection arises from a neuron projection.","definition_xrefs":["PMID:25586189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection branch point","termid":"GO:0061845"}


id: GO:1903440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of amylin receptor activity.","definition_xrefs":["PMID:10871296","PMID:12037140","PMID:18687416","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex","termid":"GO:1903440"}


id: GO:0042700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by luteinizing hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway","synonyms":[{"name":"luteinizing hormone signalling pathway","type":"exact"}],"termid":"GO:0042700"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: GO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of neurotransmitter secretion","termid":"GO:0046928"}


id: GO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Peyer's patch is generated and organized. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"Peyer's patch development","termid":"GO:0048541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch morphogenesis","termid":"GO:0061146"}


id: GO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of both isopentenyl pyrophosphate and dimethylallyl pyrophosphate from (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate.","definition_xrefs":["GOC:js","PMID:11818558"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxymethylbutenyl pyrophosphate reductase activity (obsolete GO:0042380)","synonyms":[{"name":"(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)","type":"exact"}],"termid":"GO:0042380"}


id: MONDO:0021144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the ovary that is characterized by a predominance of clear and hobnail cells.","definition_xrefs":["NCIT:C40076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian clear cell tumor","secondary_identifiers":["ONCOTREE:CCOV","UMLS:C0346164","MEDGEN:138040"],"synonyms":[{"name":"clear cell ovarian cancer","type":"related"},{"name":"ovarian clear cell neoplasm","type":"exact"},{"name":"ovarian clear cell tumor","type":"exact"}],"termid":"MONDO:0021144","xrefs":{"Monarch":{"xref_id":"0021144"}}}


id: PBO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZ family zinc finger 2","termid":"PBO:0047520"}


id: PBO:0051626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN antisense RNA 1","termid":"PBO:0051626"}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: GO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cibarial fish-trap bristle are generated and organized. A cibarial fish-trap bristle is a sensory bristle on the anterior plate of the cibarium.","definition_xrefs":["FBbt:00004136","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chaeta morphogenesis","termid":"GO:0008407"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"cibarial fish-trap bristle development","termid":"GO:0048725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cibarial fish-trap bristle morphogenesis","synonyms":[{"name":"fish trap bristle morphogenesis","type":"related"}],"termid":"GO:0048718"}


id: PBO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_equatorial_microtubule_organizing_center","termid":"PBO:0030281"}


id: MONDO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the intrahepatic biliary tree (intrahepatic cholangiocarcinoma) or from the junction, or adjacent to the junction, of the right and left hepatic ducts (hilar cholangiocarcinoma). Grossly, the malignant lesions are solid, nodular, and grayish. Morphologically, the vast majority of cases are adenocarcinomas. Signs and symptoms include malaise, weight loss, right upper quadrant abdominal pain, and night sweats. Early detection is difficult and the prognosis is generally poor.","definition_xrefs":["NCIT:C4436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cholangiocarcinoma","secondary_identifiers":["Orphanet:70567","SCTID:312104005","icd11.foundation:2110597275","UMLS:C0206698","MedDRA:10004593","DOID:4947","EFO:0005221","MedDRA:10008593","GARD:9304","ICDO:8160/3","NORD:926","MEDGEN:60210","ONCOTREE:CHOL","MESH:D018281"],"synonyms":[{"name":"CC","type":"exact"},{"name":"CCA","type":"exact"},{"name":"Cholangiocar.- intra/extrahepatic","type":"exact"},{"name":"Cholangiocellular carcinoma","type":"exact"},{"name":"adult primary cholangiocarcinoma","type":"exact"},{"name":"adult primary cholangiocellular carcinoma","type":"exact"},{"name":"bile duct cancer","type":"broad"},{"name":"cholangiocarcinoma","type":"exact"},{"name":"cholangiocarcinoma, intrahepatic and extrahepatic bile ducts (adenocarcinoma)","type":"exact"},{"name":"cholangiocarcinoma, malignant","type":"exact"},{"name":"cholangiosarcoma","type":"exact"},{"name":"intrahepatic bile duct cancer (cholangiocarcinoma)","type":"broad"}],"termid":"MONDO:0019087","xrefs":{"Monarch":{"xref_id":"0019087"}}}


id: GO:1903968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16928959","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to micafungin","termid":"GO:1903967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to micafungin","termid":"GO:1903968"}


id: PBO:0028169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028169"}


id: GO:0003435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened that contributes to the progression of a growth plate cartilage chondrocyte over time.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete smoothened signaling pathway involved in growth plate cartilage chondrocyte development (obsolete GO:0003435)","synonyms":[{"name":"hedgehog signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"hh signaling pathway involved in growth plate cartilage chondrocyte development","type":"exact"},{"name":"smoothened signalling pathway involved in growth plate cartilage chondrocyte development","type":"exact"}],"termid":"GO:0003435"}


id: GO:0004042
data:
  {"annotated_genes":["SJAG_01592","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66616,74134],"is_not":false,"summary":null,"term":"GO:0004042"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + acetyl-CoA = N-acetyl-L-glutamate + CoA + H+.","definition_xrefs":["RHEA:24292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00695":null,"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"L-glutamate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"secondary_identifiers":["Reactome:R-HSA-70542","MetaCyc:N-ACETYLTRANSFER-RXN","KEGG_REACTION:R00259"],"synonyms":[{"name":"AGAS","type":"related"},{"name":"N-acetylglutamate synthase activity","type":"broad"},{"name":"acetyl-CoA:L-glutamate N-acetyltransferase activity","type":"exact"},{"name":"acetylglutamate acetylglutamate synthetase activity","type":"related"},{"name":"amino acid acetyltransferase activity","type":"related"},{"name":"amino-acid N-acetyltransferase activity","type":"broad"}],"termid":"GO:0004042","terms_by_termid":{"GO:0004042":null}}


id: PBO:0052262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM2B divergent transcript","termid":"PBO:0052262"}


id: GO:0060195
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107528],"is_not":false,"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["PMID:18075583","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"negatively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"negative regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060195","terms_by_termid":{"GO:0060195":null}}


id: PBO:0058959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MKRN2 opposite strand","termid":"PBO:0058959"}


id: GO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + taurine = aminoacetaldehyde + CO2 + succinate + sulfite.","definition_xrefs":["EC:1.14.11.17","RHEA:15909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taurine dioxygenase activity","secondary_identifiers":["MetaCyc:RXN0-299","KEGG_REACTION:R05320"],"synonyms":[{"name":"2-aminoethanesulfonate dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate-dependent taurine dioxygenase activity","type":"related"},{"name":"taurine, 2-oxoglutarate:O2 oxidoreductase (sulfite-forming)","type":"related"}],"termid":"GO:0000908"}


id: MONDO:0013573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the IFT43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025","MONDO:0005093","MONDO:0005240"],"is_obsolete":false,"name":"cranioectodermal dysplasia 3","secondary_identifiers":["DOID:0080805","GARD:15757","OMIM:614099","MEDGEN:481437","UMLS:C3279807"],"synonyms":[{"name":"CED3","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 3","type":"related"},{"name":"Cranioectodermal dysplasia type 3","type":"exact"},{"name":"IFT43 cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 3","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in IFT43","type":"exact"}],"termid":"MONDO:0013573","xrefs":{"Monarch":{"xref_id":"0013573"}}}


id: GO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the pronephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in pronephros development","synonyms":[{"name":"cell differentiation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039014"}


id: GO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + Neu5Gc = diphosphate + CMP-Neu5Gc.","definition_xrefs":["ISBN:978-1-60805-067-3","PMID:11479279","PMID:8381411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity","synonyms":[{"name":"CMP-Neu5Gc synthetase activity","type":"exact"}],"termid":"GO:0090632"}


id: MONDO:0012803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by diarrhea and vomiting after ingestion of trehalose, a disaccharide found mainly in mushrooms.","definition_xrefs":["Orphanet:103909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"diarrhea-vomiting due to trehalase deficiency","secondary_identifiers":["MEDGEN:75660","MESH:C562603","SCTID:84193000","GARD:10372","ICD9:271.8","OMIM:612119","UMLS:C0268187","icd11.foundation:2025219157"],"synonyms":[{"name":"isolated trehalose intolerance","type":"exact"},{"name":"trehalase deficiency","type":"related"},{"name":"trehalose intolerance","type":"related"}],"termid":"MONDO:0012803","xrefs":{"Monarch":{"xref_id":"0012803"}}}


id: PR:O13913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.07","synonyms":[{"name":"Spom972h-SPAC23C11.07","type":"exact"}],"termid":"PR:O13913"}


id: GO:2000158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-specific protease activity","synonyms":[{"name":"positive regulation of UBP","type":"related"},{"name":"positive regulation of UCH2","type":"related"},{"name":"positive regulation of deubiquitinase activity","type":"exact"},{"name":"positive regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000158"}


id: MONDO:0013772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huppke-Brendel syndrome","secondary_identifiers":["Orphanet:300313","UMLS:C4751114","MEDGEN:1659966","GARD:17365","OMIM:614482"],"synonyms":[{"name":"CCHLND","type":"related"},{"name":"Huppke-Brendel syndrome","type":"exact"},{"name":"acetyl CoA transporter deficiency","type":"exact"},{"name":"congenital cataract-deafness-severe developmental delay syndrome","type":"exact"},{"name":"congenital cataracts, hearing loss, and neurodegeneration","type":"exact"},{"name":"lethal neurodegenerative disorder due to copper transport defect","type":"exact"}],"termid":"MONDO:0013772","xrefs":{"Monarch":{"xref_id":"0013772"}}}


id: PBO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP5 divergent transcript","termid":"PBO:0043517"}


id: PBO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1 (predicted)","termid":"PBO:0003369"}


id: SO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that deletes bases from the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_deletion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","SO:0001652","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:nonframeshift deletion","type":"exact"},{"name":"Jannovar:inframe_deletion","type":"exact"},{"name":"VAT:deletionNFS","type":"exact"},{"name":"VEP:inframe_deletion","type":"exact"},{"name":"inframe codon loss","type":"related"},{"name":"inframe decrease in CDS length","type":"exact"},{"name":"inframe deletion","type":"related"},{"name":"inframe_codon_loss","type":"exact"},{"name":"snpEff:CODON_DELETION","type":"related"}],"termid":"SO:0001822"}


id: GO:0043874
data:
  {"annotated_genes":["SJAG_01404"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81000],"is_not":false,"summary":null,"term":"GO:0043874"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions:5-methylsulfanyl-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one + phosphate.","definition_xrefs":["RHEA:21700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acireductone synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1237129","MetaCyc:3.1.3.77-RXN","EC:3.1.3.77"],"synonyms":[{"name":"5-(methylthio)-2,3-dioxopentyl-phosphate phosphohydrolase (isomerizing)","type":"related"},{"name":"E-1","type":"related"},{"name":"E-1 enolase-phosphatase","type":"broad"}],"termid":"GO:0043874","terms_by_termid":{"GO:0043874":null}}


id: PR:Q9UTH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1786.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.02","synonyms":[{"name":"Spom972h-SPAC1786.02","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH5"}


id: MONDO:0012012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type C is a rare hereditary motor and sensory neuropathy characterized by intermediate motor median nerve conduction velocities (usually between 25 and 60 m/s). It presents with moderately severe, slowly progressive usual clinical features of Charcot-Marie-Tooth disease (muscle weakness and atrophy of the distal extremities, distal sensory loss, reduced or absent deep tendon reflexes, feet deformities, extensor digitorum brevis atrophy). Findings in nerve biopsies include age-dependent axonal degeneration, reduced number of large myelinated fibers, segmental remyelination, and no onion bulbs.","definition_xrefs":["Orphanet:100045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate C","secondary_identifiers":["SCTID:765746008","OMIM:608323","DOID:0110199","MESH:C564257","MEDGEN:334023","UMLS:C1842237","GARD:12439"],"synonyms":[{"name":"CMTDIC","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in YARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type C","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type C","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate C","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy dominant intermediate C","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate C","type":"related"},{"name":"DI-CMTC","type":"exact"},{"name":"Di-Cmtc","type":"related"},{"name":"YARS Charcot-Marie-Tooth disease","type":"exact"},{"name":"YARS-related intermediate Charcot-Marie-Tooth neuropathy","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type C","type":"exact"}],"termid":"MONDO:0012012","xrefs":{"Monarch":{"xref_id":"0012012"}}}


id: PBO:0082650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu1, and promotes error-free DNA repair, Shu complex mediates inhibition of Srs2p function; promotes formation of Rad51p filaments; important for both mitotic and meiotic homologous recombination, and contains a conserved SWIM domain that is necessary for both","termid":"PBO:0082650"}


id: MONDO:0008132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leber plus disease","termid":"MONDO:0020478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"optic atrophy with demyelinating disease of CNS","secondary_identifiers":["UMLS:C1833830","DOID:0111756","MEDGEN:322290","OMIM:165200","MESH:C563496","GARD:15098"],"synonyms":[{"name":"optic atrophy with demyelinating disease of CNS","type":"exact"}],"termid":"MONDO:0008132","xrefs":{"Monarch":{"xref_id":"0008132"}}}


id: GO:0018670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + NADPH + H+ + O2 = 4-hydroxyaniline + NADP+ + H2O + CO2.","definition_xrefs":["EC:1.14.13.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-aminobenzoate 1-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0597","MetaCyc:4-AMINOBENZOATE-1-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-aminobenzoate dehydrogenase activity","type":"related"},{"name":"4-aminobenzoate hydroxylase activity","type":"exact"},{"name":"4-aminobenzoate monooxygenase activity","type":"related"},{"name":"4-aminobenzoate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating, decarboxylating)","type":"related"}],"termid":"GO:0018670"}


id: MONDO:1012238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal nephropathy, non-human animal","termid":"MONDO:1011912"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal nephropathy, dog","secondary_identifiers":["OMIA:000860-9615"],"termid":"MONDO:1012238","xrefs":{"Monarch":{"xref_id":"1012238"}}}


id: PBO:0066404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REL divergent transcript","termid":"PBO:0066404"}


id: GO:0008974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + ATP = D-ribulose 1,5-bisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:19365","EC:2.7.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribulokinase activity","secondary_identifiers":["MetaCyc:PHOSPHORIBULOKINASE-RXN","KEGG_REACTION:R01523"],"synonyms":[{"name":"5-phosphoribulose kinase activity","type":"related"},{"name":"ATP:D-ribulose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PKK","type":"related"},{"name":"PRK","type":"related"},{"name":"PRuK","type":"related"},{"name":"phosphopentokinase activity","type":"related"},{"name":"phosphoribulokinase (phosphorylating)","type":"related"},{"name":"ribulose phosphate kinase activity","type":"related"},{"name":"ribulose-5-phosphate kinase activity","type":"related"}],"termid":"GO:0008974"}


id: GO:0098764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis I cell cycle phase","termid":"GO:0098764"}


id: PBO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1","termid":"PBO:0047820"}


id: PBO:0041970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 13","termid":"PBO:0041970"}


id: PBO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-38 (pseudogene)","termid":"PBO:0051466"}


id: PBO:0089920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2","termid":"PBO:0089920"}


id: PBO:0082714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the nonsense-mediated mRNA decay (NMD) pathway; along with Nam7p and Nmd2p; involved in decay of mRNA containing nonsense codons; involved in telomere maintenance","termid":"PBO:0082714"}


id: GO:0035506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of myosin light chain kinase activity (obsolete GO:0035506)","termid":"GO:0035506"}


id: PBO:0069422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 685, pseudogene","termid":"PBO:0069422"}


id: GO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the cytoplasm, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic SCF ubiquitin ligase complex","synonyms":[{"name":"cytoplasmic SCF complex","type":"exact"},{"name":"cytoplasmic Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cytoplasmic cullin complex","type":"exact"}],"termid":"GO:0043223"}


id: PBO:0039465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13B","termid":"PBO:0039465"}


id: PBO:0068718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 7, pseudogene","termid":"PBO:0068718"}


id: MONDO:0018111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic severe pneumococcemia","secondary_identifiers":["Orphanet:35065"],"termid":"MONDO:0018111","xrefs":{"Monarch":{"xref_id":"0018111"}}}


id: PBO:0113104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta (pol eta); involved in translesion synthesis during post-replication repair; catalyzes synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have role in protection against mitochondrial mutagenesis; may possibly be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0113104"}


id: PBO:0052608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB-A domain containing 1","termid":"PBO:0052608"}


id: MONDO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of arthritis that affects hemophiliacs, which is characterized by bleeding into the joint space.","definition_xrefs":["NCIT:C27039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilic arthropathy","secondary_identifiers":["MEDGEN:120487","UMLS:C0263725","SCTID:80813006"],"synonyms":[{"name":"arthropathy in haemophilia","type":"related"},{"name":"arthropathy in hemophilia","type":"related"},{"name":"hemophilic arthritis","type":"exact"},{"name":"hemophilic arthropathy","type":"exact"}],"termid":"MONDO:0043240","xrefs":{"Monarch":{"xref_id":"0043240"}}}


id: MONDO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the pylorus.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pylorus cancer","secondary_identifiers":["ICD9:151.1","UMLS:C0153418","NCIT:C188051","MEDGEN:509281","SCTID:187736009","DOID:10544"],"synonyms":[{"name":"Ca pylorus - stomach","type":"exact"},{"name":"cancer of pylorus","type":"exact"},{"name":"malignant neoplasm of Prepylorus","type":"exact"},{"name":"malignant neoplasm of pylorus","type":"exact"},{"name":"malignant neoplasm of pylorus of stomach","type":"exact"},{"name":"malignant pylorus neoplasm","type":"exact"},{"name":"malignant tumor of pylorus","type":"exact"},{"name":"malignant tumour of pylorus","type":"exact"},{"name":"pylorus cancer","type":"exact"}],"termid":"MONDO:0001061","xrefs":{"Monarch":{"xref_id":"0001061"}}}


id: PBO:0080360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 15 pseudogene","termid":"PBO:0080360"}


id: PBO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor","termid":"PBO:0017695"}


id: PBO:0058607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6739","termid":"PBO:0058607"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: GO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete conjugation (obsolete GO:0000746)","secondary_identifiers":["Wikipedia:Conjugation"],"termid":"GO:0000746"}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: GO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small-molecule carrier or transporter (obsolete GO:0005468)","synonyms":[{"name":"small-molecule carrier or transporter","type":"exact"}],"termid":"GO:0005468"}


id: GO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.","definition_xrefs":["EC:3.2.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase activity","secondary_identifiers":["Reactome:R-HSA-5651828","RHEA:52216","Reactome:R-HSA-8952903","MetaCyc:3.2.1.143-RXN"],"termid":"GO:0004649"}


id: GO:0034484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"raffinose catabolic process","synonyms":[{"name":"raffinose breakdown","type":"exact"},{"name":"raffinose catabolism","type":"exact"},{"name":"raffinose degradation","type":"exact"}],"termid":"GO:0034484"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-versicolorone + NADP+ = 1'-hydroxyversicolorone + H+ + NADPH.","definition_xrefs":["RHEA:35699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491"],"termid":"GO:0102976"}


id: MONDO:0014929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the POMGNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 76","secondary_identifiers":["GARD:16196","OMIM:617123","UMLS:C4310704","MEDGEN:934671"],"synonyms":[{"name":"POMGNT1 retinitis pigmentosa","type":"exact"},{"name":"RP76","type":"exact"},{"name":"retinitis pigmentosa 76","type":"exact"},{"name":"retinitis pigmentosa 76; RP76","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in POMGNT1","type":"exact"},{"name":"retinitis pigmentosa type 76","type":"exact"}],"termid":"MONDO:0014929","xrefs":{"Monarch":{"xref_id":"0014929"}}}


id: PBO:0087441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit G of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; involved in vacuolar acidification; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087441"}


id: MOD:00146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to tetrakis-L-cysteinyl diiron disulfide.","definition_xrefs":["PubMed:2123937","RESID:AA0137","PubMed:8688437","PubMed:7763242","PubMed:6801028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"METAL Iron-sulfur (2Fe-2S); shared with dimeric partner","type":"exact"},{"name":"tetrakis-L-cysteinyl diiron disulfide","type":"exact"},{"name":"tetrakiscysteinato-1kappa(2)S,2kappa(2)S-di-mu-sulfido-diiron","type":"exact"}],"termid":"MOD:00146"}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PomBase:mah","PMID:23395004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: PBO:0072999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 1","termid":"PBO:0072999"}


id: PR:O74481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi5 gene.","definition_xrefs":["UniProtKB:O74481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.08c","synonyms":[{"name":"Spom972h-pdi5","type":"exact"}],"termid":"PR:O74481"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: GO:1905283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GO_REF:0000058","PMID:23069713","GOC:bc","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"down regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905283"}


id: PBO:0072065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 3","termid":"PBO:0072065"}


id: SO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["PMID:17597783","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_frequency","synonyms":[{"name":"variant frequency","type":"exact"}],"termid":"SO:0001763"}


id: FYPO:0005677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is lower than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"decreased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"decreased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced number of Rad52 foci during mitotic S phase","type":"exact"}],"termid":"FYPO:0005677"}


id: PATO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000312 color intensity value (obsolete PATO:0000312)","termid":"PATO:0000312"}


id: MONDO:1012903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the SOX10 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, SOX10-related, pig","secondary_identifiers":["OMIA:002453-9823"],"termid":"MONDO:1012903","xrefs":{"Monarch":{"xref_id":"1012903"}}}


id: PBO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035726"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["GOC:yaf","UniPathway:UPA00880","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: PR:O13286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin-like enhancer protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01936","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein srw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.13c","secondary_identifiers":["UniProtKB:O13286"],"synonyms":[{"name":"Spom972h-TLE3","type":"exact"},{"name":"suppressor of rad/wee1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13286"}


id: PBO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12","termid":"PBO:0090519"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: PBO:0063559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 3","termid":"PBO:0063559"}


id: PBO:0087345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphinganine C4-hydroxylase; catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis","termid":"PBO:0087345"}


id: PBO:0026746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026746"}


id: PATO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripartite","termid":"PATO:0001890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-shaped","termid":"PATO:0001201"}


id: GO:0030877
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome.","definition_xrefs":["PMID:14600025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"beta-catenin destruction complex","secondary_identifiers":["GO:0034742","GO:0034747"],"synonyms":[{"name":"23S APC complex","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex","type":"exact"},{"name":"BDC","type":"exact"},{"name":"beta-catenin degradation complex","type":"exact"}],"termid":"GO:0030877"}


id: MONDO:0016385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadism due to primary gonadal failure, mitral valve prolapse, mild intellectual deficit and short stature.","definition_xrefs":["Orphanet:2233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism-mitral valve prolapse-intellectual disability syndrome","secondary_identifiers":["UMLS:C2931685","GARD:1078","MESH:C537981","MEDGEN:444117","SCTID:721841001"],"synonyms":[{"name":"Cantalamessa Baldini Ambrosi syndrome","type":"related"},{"name":"Cantalamessa-Baldini-Ambrosi syndrome","type":"exact"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and intellectual disability","type":"related"},{"name":"primary gonadal failure, short stature, mitral valve prolapse, and mental retardation","type":"related"}],"termid":"MONDO:0016385","xrefs":{"Monarch":{"xref_id":"0016385"}}}


id: PBO:0028736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-L-selenoneine_absent_from_cell","termid":"PBO:0028736"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: PBO:0049747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit theta 1","termid":"PBO:0049747"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["RHEA:54084","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["EC:2.6.1.97","Wikipedia:Archaeosine_synthase"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: PBO:0083603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase","termid":"PBO:0083603"}


id: PBO:0054395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1791","termid":"PBO:0054395"}


id: MOD:00585
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three (2)H deuterium atoms for three (1)H protium atoms.","definition_xrefs":["Unimod:262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium trisubstituted residue","synonyms":[{"name":"D(H)3Res","type":"exact"},{"name":"Label:2H(3)","type":"related"},{"name":"Trideuteration","type":"related"}],"termid":"MOD:00585"}


id: PBO:0075828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 3","termid":"PBO:0075828"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity (obsolete GO:0102689)","termid":"GO:0102689"}


id: MONDO:0019221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete creatine deficiency syndrome (obsolete MONDO:0019221)","termid":"MONDO:0019221","xrefs":{"Monarch":{"xref_id":"0019221"}}}


id: MONDO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperinsulinemic hypoglycaemia (obsolete MONDO:0018619)","termid":"MONDO:0018619","xrefs":{"Monarch":{"xref_id":"0018619"}}}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: PR:Q10193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srp1 gene.","definition_xrefs":["UniProtKB:Q10193","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor srp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.08","synonyms":[{"name":"Spom972h-srp1","type":"exact"}],"termid":"PR:Q10193"}


id: FYPO:0007255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of replication fork processing is decreased. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["GO:0031297","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork processing","synonyms":[{"name":"decreased HR-mediated fork restart","type":"related"},{"name":"decreased collapsed replication fork processing","type":"exact"},{"name":"decreased recovery from replication fork arrest","type":"exact"},{"name":"decreased recovery from replication fork stalling","type":"exact"},{"name":"decreased replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased replication fork processing during vegetative growth","type":"exact"},{"name":"decreased replication fork restart","type":"related"},{"name":"decreased replication restart","type":"related"},{"name":"reduced replication fork processing","type":"exact"}],"termid":"FYPO:0007255"}


id: PBO:0055149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2568","termid":"PBO:0055149"}


id: PBO:0065441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 2","termid":"PBO:0065441"}


id: PR:O60071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- enp1 gene.","definition_xrefs":["UniProtKB:O60071","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.09","synonyms":[{"name":"Spom972h-enp1","type":"exact"}],"termid":"PR:O60071"}


id: GO:0006013
data:
  {"annotated_genes":["SJAG_02783","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77869,80983],"is_not":false,"summary":null,"term":"GO:0006013"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02783":null,"SJAG_04334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"mannose metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mannose metabolism","type":"exact"}],"termid":"GO:0006013","terms_by_termid":{"GO:0006013":null}}


id: FYPO:0003472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is subject to salt stress. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to salt stress (obsolete FYPO:0003472)","synonyms":[{"name":"cut during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003472"}


id: PBO:0052773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 65","termid":"PBO:0052773"}


id: GO:0035584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.","definition_xrefs":["GOC:bf","GOC:BHF","PMID:20192754"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using intracellular calcium source (obsolete GO:0035584)","synonyms":[{"name":"calcium signaling using intracellular calcium source","type":"exact"},{"name":"calcium signalling using intracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using intracellular calcium source","type":"exact"}],"termid":"GO:0035584"}


id: PBO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family GTPase Dnm1","termid":"PBO:0018272"}


id: FYPO:0007930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of phloxine B and hydrogen peroxide. Cells stop growing (and may die) at concentrations of phloxine B and hydrogen peroxide that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to phloxine B and hydrogen peroxide","termid":"FYPO:0007930"}


id: PBO:0054032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1363","termid":"PBO:0054032"}


id: PBO:0041281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 7","termid":"PBO:0041281"}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: GO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-serine to form peptidyl-O3-octanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["PMID:10604470","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-serine octanoylation","termid":"GO:0018191"}


id: GO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with acetylcholine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:mah","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"},{"relation_name":"is_a","term_name":"acetylcholine receptor activity","termid":"GO:0015464"},{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor activity","secondary_identifiers":["GO:0004981","Reactome:R-HSA-400012"],"synonyms":[{"name":"G protein coupled acetylcholine receptor activity","type":"exact"},{"name":"G-protein coupled acetylcholine receptor activity","type":"exact"},{"name":"acetylcholine receptor activity, G-protein coupled","type":"exact"},{"name":"metabotropic acetylcholine receptor activity","type":"exact"},{"name":"muscarinic acetylcholine receptor activity","type":"exact"}],"termid":"GO:0016907"}


id: PBO:0040743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 9","termid":"PBO:0040743"}


id: MONDO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute inferoposterior infarction","secondary_identifiers":["ICD9:410.32","UMLS:C0340304","DOID:10648","SCTID:76593002","ICD9:410.30","ICD9:410.31","MEDGEN:573662"],"synonyms":[{"name":"acute inferoposterior infarction","type":"exact"},{"name":"acute inferoposterior myocardial infarction","type":"exact"},{"name":"acute myocardial infarction of inferoposterior wall","type":"exact"}],"termid":"MONDO:0001088","xrefs":{"Monarch":{"xref_id":"0001088"}}}


id: GO:0070494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thrombin-activated receptor signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"regulation of thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070494"}


id: MONDO:0021143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocytic neoplasm","secondary_identifiers":["NCIT:C7058","UMLS:C1302746","SCTID:399956005","MEDGEN:224910","MESH:D018326"],"synonyms":[{"name":"melanocytic neoplasm","type":"exact"},{"name":"melanomas and nevi","type":"related"}],"termid":"MONDO:0021143","xrefs":{"Monarch":{"xref_id":"0021143"}}}


id: PBO:0089169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop4","termid":"PBO:0089169"}


id: PBO:0038536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12, lysophospholipase","termid":"PBO:0038536"}


id: MONDO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of deglycosylation","termid":"MONDO:0031376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of deglycosylation 2","secondary_identifiers":["MEDGEN:1809253","OMIM:619775","UMLS:C5676931"],"synonyms":[{"name":"CDDG2","type":"exact"},{"name":"congenital disorder of deglycosylation 2","type":"exact"}],"termid":"MONDO:0030770","xrefs":{"Monarch":{"xref_id":"0030770"}}}


id: PR:O74360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.03","synonyms":[{"name":"Spom972h-rga4","type":"exact"}],"termid":"PR:O74360"}


id: GO:0097423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle arrangement comprised of the following elements: a mitochondrion positioned near the presynaptic membrane; an electron-dense mitochondrial plaque adjacent to the outer mitochondrial membrane that faces the presynaptic membrane; filament-like elements appearing to link the mitochondrial plaque to a cell-cell junction region (sometimes termed punctum adherens); tubular or vesicular-appearing membrane (also called vesicular chain) interposed among the filaments. Mitochondrion-associated adherens complexes were initially described in the dorsal horn of the spinal cord. They are found in calyces and other large terminals of the auditory brainstem, and in a variety of mammalian species including humans.","definition_xrefs":["NIF_Subcellular:sao1933817066","PMID:20089910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondrion-associated adherens complex","synonyms":[{"name":"MAC","type":"related"},{"name":"mitochondrial adhaerens complex","type":"exact"}],"termid":"GO:0097423"}


id: GO:0038130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB4 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB4 signaling pathway","synonyms":[{"name":"ERBB4 signalling pathway","type":"exact"},{"name":"HER4 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-4 signaling pathway","type":"exact"}],"termid":"GO:0038130"}


id: PBO:0075851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2B","termid":"PBO:0075851"}


id: GO:0097288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"},{"relation_name":"is_a","term_name":"7-cyano-7-deazaguanine metabolic process","termid":"GO:0097287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine biosynthetic process","synonyms":[{"name":"7-cyano-7-deazaguanine anabolism","type":"exact"},{"name":"7-cyano-7-deazaguanine biosynthesis","type":"exact"},{"name":"7-cyano-7-deazaguanine formation","type":"exact"},{"name":"7-cyano-7-deazaguanine synthesis","type":"exact"}],"termid":"GO:0097288"}


id: MONDO:0011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"campomelic dysplasia","termid":"MONDO:0007251"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","secondary_identifiers":["OMIM:602196","UMLS:C1865783","MESH:C535775","GARD:10090","MEDGEN:355549"],"synonyms":[{"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","type":"exact"},{"name":"campomelic dysplasia, mild","type":"related"},{"name":"skeletal dysplasia related to campomelic dysplasia","type":"related"}],"termid":"MONDO:0011203","xrefs":{"Monarch":{"xref_id":"0011203"}}}


id: GO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-sulfoacetaldehyde + H2O = acetate + sulfite.","definition_xrefs":["EC:4.4.1.12","MetaCyc:SULFOACETALDEHYDE-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfoacetaldehyde lyase activity (obsolete GO:0050312)","synonyms":[{"name":"sulphoacetaldehyde lyase activity","type":"exact"}],"termid":"GO:0050312"}


id: FYPO:0004154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to heat","synonyms":[{"name":"normal protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004154"}


id: GO:0007172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:9646862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal complex assembly","synonyms":[{"name":"signal complex formation","type":"exact"}],"termid":"GO:0007172"}


id: MONDO:0011941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, 1","secondary_identifiers":["UMLS:C1842762","MEDGEN:334244","OMIM:607949"],"synonyms":[{"name":"MTBS1","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility to, type 1","type":"exact"},{"name":"tuberculosis, susceptibility to","type":"broad"}],"termid":"MONDO:0011941","xrefs":{"Monarch":{"xref_id":"0011941"}}}


id: PBO:0053715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 924","termid":"PBO:0053715"}


id: GO:0022835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific neurotransmitter has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"transmitter-gated channel activity","synonyms":[{"name":"extracellular substance gated channel activity","type":"exact"},{"name":"neurotransmitter-gated channel activity","type":"exact"}],"termid":"GO:0022835"}


id: FYPO:0004325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluorouracil. Cells stop growing (and may die) at a concentration of 5-fluorouracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 5-fluorouracil","synonyms":[{"name":"hypersensitive to 5-fluorouracil","type":"exact"},{"name":"sensitive to 5-FU","type":"exact"},{"name":"sensitive to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluorouracil during vegetative growth","type":"exact"}],"termid":"FYPO:0004325"}


id: PBO:0027502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_MTT","termid":"PBO:0027502"}


id: MONDO:1011480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker type muscular dystrophy that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Becker type muscular dystrophy, non-human animal","termid":"MONDO:1011435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Becker type muscular dystrophy, pig","secondary_identifiers":["OMIA:001888-9823"],"termid":"MONDO:1011480","xrefs":{"Monarch":{"xref_id":"1011480"}}}


id: PBO:0069666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 943, pseudogene","termid":"PBO:0069666"}


id: MONDO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandhoff disease is a lysosomal storage disorder from the GM2 gangliosidosis family and is characterized by central nervous system degeneration.","definition_xrefs":["Orphanet:796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002561","MONDO:0002039","MONDO:0005328","MONDO:0005066","MONDO:0002525","MONDO:0005244"],"is_obsolete":false,"name":"Sandhoff disease","secondary_identifiers":["GARD:2521","icd11.foundation:708581915","MESH:D012497","UMLS:C0036161","NCIT:C85052","NANDO:1200072","NANDO:2201200","MEDGEN:11313","ICD10CM:E75.01","SCTID:23849003","OMIM:268800","DOID:3323","NORD:1688"],"synonyms":[{"name":"Beta-hexosaminidase-beta-subunit deficiency","type":"related"},{"name":"GM2 gangliosidosis 0 variant","type":"exact"},{"name":"GM2 gangliosidosis, 0 variant","type":"related"},{"name":"GM2 gangliosidosis, type 2","type":"related"},{"name":"GM2-gangliosidosis, type 2","type":"related"},{"name":"Hexosaminidases A and B deficiency","type":"exact"},{"name":"Hexosaminidases a and B deficiency","type":"related"},{"name":"Sandhoff Jatzkewitz disease","type":"exact"},{"name":"Sandhoff disease","type":"exact"},{"name":"Sandhoff disease, adult type","type":"related"},{"name":"Sandhoff disease, infantile type","type":"related"},{"name":"Sandhoff disease, infantile, juvenile, and adult forms","type":"exact"},{"name":"Sandhoff disease, juvenile type","type":"related"},{"name":"Sandhoff-Jatzkewitz-Pilz disease","type":"related"},{"name":"hexosaminidase A and B deficiency disease","type":"related"},{"name":"total hexosaminidase deficiency","type":"related"}],"termid":"MONDO:0010006","xrefs":{"Monarch":{"xref_id":"0010006"}}}


id: GO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vacuole organization in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25139904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vacuole organization","synonyms":[{"name":"modulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"modulation by symbiont of host vacuole organisation","type":"exact"},{"name":"modulation by symbiont of host vacuole organization","type":"exact"},{"name":"modulation of host vacuole organization by symbiont","type":"exact"},{"name":"regulation by symbiont of host vacuole organization","type":"exact"}],"termid":"GO:0044075"}


id: FYPO:0004148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxamine-phosphate oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal pyridoxamine-phosphate oxidase activity","termid":"FYPO:0004148"}


id: GO:1990882
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"The modification of rRNA structure by addition of an acetyl group to rRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"rRNA acetylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990882","terms_by_termid":{"GO:1904812":null}}


id: PBO:0077774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 1","termid":"PBO:0077774"}


id: PBO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 2","termid":"PBO:0044378"}


id: GO:0033423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"CCA codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033423"}


id: MONDO:0004006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare cystadenofibroma that arises from the rete ovarii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii cystadenofibroma","secondary_identifiers":["DOID:6838","MEDGEN:308159","UMLS:C1514906","NCIT:C40020"],"synonyms":[{"name":"cystadenofibroma of rete ovarii","type":"exact"},{"name":"rete ovarii cystadenofibroma","type":"exact"}],"termid":"MONDO:0004006","xrefs":{"Monarch":{"xref_id":"0004006"}}}


id: FYPO:0002547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nicotinamide. Cells stop growing (and may die) at a concentration of nicotinamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nicotinamide","synonyms":[{"name":"hypersensitive to nicotinamide","type":"exact"},{"name":"sensitive to nicotinamide during mitotic cell cycle","type":"related"},{"name":"sensitive to nicotinamide during vegetative growth","type":"exact"}],"termid":"FYPO:0002547"}


id: PBO:0087722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in maintaining the integrity of the complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay","termid":"PBO:0087722"}


id: MONDO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-xylosyl/N-acetylgalactosaminylglycan synthesis (obsolete MONDO:0017744)","secondary_identifiers":["Orphanet:309463"],"termid":"MONDO:0017744","xrefs":{"Monarch":{"xref_id":"0017744"}}}


id: GO:0120046
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a medial cortical node.","definition_xrefs":["PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"regulates","term_name":"protein localization to medial cortical node","termid":"GO:1902577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120046","terms_by_termid":{"GO:0120047":null}}


id: PBO:0078289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 22-1","termid":"PBO:0078289"}


id: FYPO:0000515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear import is decreased. Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased nuclear import","synonyms":[{"name":"decreased nuclear import during mitotic cell cycle","type":"related"},{"name":"decreased nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: decreased","type":"related"},{"name":"reduced nuclear import","type":"exact"}],"termid":"FYPO:0000515"}


id: GO:1905297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of neural crest formation","termid":"GO:0090300"},{"relation_name":"is_a","term_name":"positive regulation of neural crest cell differentiation","termid":"GO:1905294"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"positively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell fate specification","synonyms":[{"name":"activation of neural crest cell fate specification","type":"narrow"},{"name":"up regulation of neural crest cell fate specification","type":"exact"},{"name":"up-regulation of neural crest cell fate specification","type":"exact"},{"name":"upregulation of neural crest cell fate specification","type":"exact"}],"termid":"GO:1905297"}


