# terms

id: PBO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae THI80","termid":"PBO:0011086"}


id: MONDO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tear within the wall of any of the arteries of the neck (carotid artery or vertebral artery) and that allows blood to separate the wall layers. By separating a portion of the wall of the artery (a layer of the Tunica intima or tunica media), a dissection creates two lumens or passages within the vessel, the native or true lumen, and the \\\"false lumen\\\" created by the new space within the wall of the artery.","definition_xrefs":["EFO:1000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical artery dissection","secondary_identifiers":["UMLS:C5396999","MEDGEN:1709179"],"termid":"MONDO:0006061","xrefs":{"Monarch":{"xref_id":"0006061"}}}


id: PBO:0076113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 antisense RNA 1 (head to head)","termid":"PBO:0076113"}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: MONDO:1010495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, rabbit","secondary_identifiers":["OMIA:001041-9986"],"termid":"MONDO:1010495","xrefs":{"Monarch":{"xref_id":"1010495"}}}


id: GO:0030972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of proteins in the cytosol that contributes to apoptosis.","definition_xrefs":["GOC:mah","ISBN:0815332181","GOC:mtg_apoptosis","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytosolic proteins involved in execution phase of apoptosis (obsolete GO:0030972)","synonyms":[{"name":"apoptotic cleavage of cytosolic proteins","type":"exact"},{"name":"cleavage of cytosolic proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytosolic proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0030972"}


id: GO:0032247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleoside transport","termid":"GO:0032243"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleoside transport","synonyms":[{"name":"down regulation of purine nucleoside transport","type":"exact"},{"name":"down-regulation of purine nucleoside transport","type":"exact"},{"name":"downregulation of purine nucleoside transport","type":"exact"},{"name":"inhibition of purine nucleoside transport","type":"narrow"}],"termid":"GO:0032247"}


id: GO:0051213
data:
  {"annotated_genes":["SJAG_03225","SJAG_03041","SJAG_00309","SJAG_00892","SJAG_04297","SJAG_00642","SJAG_03664","SJAG_04580","SJAG_03286","SJAG_03997","SJAG_00519","SJAG_02401","SJAG_00221","SJAG_03635","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76404,79372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016706"},{"annotations":[59102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[73148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[73977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097641"},{"annotations":[89297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"},{"annotations":[86837,72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[76715,71878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[61241,93563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[68212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016702"},{"annotations":[94300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[75783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[102628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the incorporation of both atoms of molecular oxygen (O2) into the substrate.","definition_xrefs":["PMID:1444267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00519":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03225":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04297":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dioxygenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-112120","Reactome:R-HSA-112124","Reactome:R-HSA-112121","Reactome:R-HSA-112125"],"termid":"GO:0051213","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016702":null,"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051864":null,"GO:0097641":null,"GO:0102672":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: PBO:0082600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin-coated vesicle component, regulator of endocytosis; copurifies with the DSC ubiquitin ligase complex; UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p; required for efficient clathrin-mediated endocytosis; ortholog of fission yeast Ucp10","termid":"PBO:0082600"}


id: MONDO:0019290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by a deficiency or a loss of melanin pigmentation in the epidermis, also known as hypomelanosis. Hypopigmentation can be localized or generalized, and may result from genetic defects, trauma, inflammation, or infections.","definition_xrefs":["MESH:D017496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypopigmentation of the skin","secondary_identifiers":["MEDGEN:102477","Orphanet:79376","UMLS:C0162835","MedDRA:10040868","HP:0001010"],"synonyms":[{"name":"hypomelanoses","type":"related"},{"name":"hypomelanosis","type":"related"},{"name":"hypopigmentation of the skin","type":"exact"},{"name":"hypopigmentation of the skin (disease)","type":"exact"}],"termid":"MONDO:0019290","xrefs":{"Monarch":{"xref_id":"0019290"}}}


id: MONDO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"nerve plexus disorder","termid":"MONDO:0024432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"nerve plexus neoplasm","secondary_identifiers":["UMLS:C1334945","MEDGEN:235366","NCIT:C5822","DOID:4693"],"synonyms":[{"name":"neoplasm of nerve plexus","type":"exact"},{"name":"neoplasm of the nerve plexus","type":"exact"},{"name":"nerve plexus neoplasm","type":"exact"},{"name":"nerve plexus neoplasm (disease)","type":"exact"},{"name":"nerve plexus neoplasms","type":"exact"},{"name":"nerve plexus tumor","type":"exact"},{"name":"nerve plexus tumors","type":"exact"},{"name":"nerve plexus tumour","type":"exact"},{"name":"nerve plexus tumours","type":"exact"},{"name":"neural plexus neoplasms","type":"exact"},{"name":"neural plexus tumors","type":"exact"},{"name":"neural plexus tumours","type":"exact"},{"name":"tumor of nerve plexus","type":"exact"},{"name":"tumor of the nerve plexus","type":"exact"},{"name":"tumour of nerve plexus","type":"exact"},{"name":"tumour of the nerve plexus","type":"exact"}],"termid":"MONDO:0003100","xrefs":{"Monarch":{"xref_id":"0003100"}}}


id: PBO:0029493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiosis_II_spindle","termid":"PBO:0029493"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: PBO:0056073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6C","termid":"PBO:0056073"}


id: GO:0031429
data:
  {"annotated_genes":["SJAG_00566","SJAG_01234","SJAG_00083","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59457,76268,79393,82079],"is_not":false,"summary":null,"term":"GO:0031429"}]},"cv_name":"cellular_component","definition":"A box H/ACA small nucleolar ribonucleoprotein complex located in the nucleolus that catalyzes pseudouridylation of ribosomal RNA residues. The complex is composed of four different core proteins that assemble onto a H/ACA guide RNA scaffold that identifies specific uridines in rRNA for modification during ribosome synthesis.","definition_xrefs":["GOC:vw","PMID:22065625","PMID:20227365","PMID:17284456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005730","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"box H/ACA snoRNP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"synonyms":[{"name":"box H/ACA small nucleolar ribonucleoprotein complex","type":"exact"},{"name":"box H/ACA snoRNP pseudouridylase complex","type":"exact"}],"termid":"GO:0031429","terms_by_termid":{"GO:0031429":null}}


id: MOD:01397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-threonine residue to form L-serine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0474","PubMed:7592021","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Ser-Thr)","type":"exact"},{"name":"L-serine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01397"}


id: PBO:0013045
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nmt1 Transcription Factor","termid":"PBO:0013045"}


id: FYPO:0001158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular pH","synonyms":[{"name":"normal cellular pH during mitotic cell cycle","type":"related"},{"name":"normal cellular pH during vegetative growth","type":"exact"},{"name":"normal cellular pH level","type":"exact"}],"termid":"FYPO:0001158"}


id: PBO:0039820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor guanine nucleotide exchange factor 1","termid":"PBO:0039820"}


id: GO:1904725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any TFIIB-class transcription factor binding that is involved in negative regulation of DNA-templated transcription.","definition_xrefs":["GOC:rb","GO_REF:0000061","GOC:TermGenie","PMID:12461786"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in negative regulation of transcription (obsolete GO:1904725)","synonyms":[{"name":"TFIIB-class transcription factor binding involved in down regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in downregulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in downregulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in inhibition of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-templated","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in transcription repressor activity","type":"related"}],"termid":"GO:1904725"}


id: PBO:0079388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III","termid":"PBO:0079388"}


id: FYPO:0007409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of mRNA is abnormal. mRNA alternative polyadenylation generates mRNA molecules with variable 3'-end lengths from a given pre-mRNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","definition_xrefs":["GO:0110104","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mRNA alternative polyadenylation","synonyms":[{"name":"abnormal mRNA alternative polyadenylation during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA alternative polyadenylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007409"}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: GO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into CDP to produce a CTP.","definition_xrefs":["PMID:7499258"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP phosphorylation (obsolete GO:0061508)","termid":"GO:0061508"}


id: GO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (pseudohyphal growth) (obsolete GO:0000195)","synonyms":[{"name":"nuclear translocation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000195"}


id: PBO:0053054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC00240 antisense RNA regulating promoter methylation","termid":"PBO:0053054"}


id: PBO:0054483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1883","termid":"PBO:0054483"}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: GO:0052110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its host's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by symbiont of host vascular system (obsolete GO:0052110)","termid":"GO:0052110"}


id: PBO:0091595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, similar to region downstream of rps13","termid":"PBO:0091595"}


id: PBO:0090049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease","termid":"PBO:0090049"}


id: PBO:0065099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit beta","termid":"PBO:0065099"}


id: PBO:0064793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1L","termid":"PBO:0064793"}


id: GO:0051012
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031534"},{"annotations":[100970],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0062168"},{"annotations":[98744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031535"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule.","definition_xrefs":["PMID:14614826","PMID:14557818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule translocation","type":"exact"}],"termid":"GO:0051012","terms_by_termid":{"GO:0031534":null,"GO:0031535":null,"GO:0062168":null}}


id: MONDO:1010757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrodermatitis enteropathica that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodermatitis enteropathica, non-human animal","termid":"MONDO:1010133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrodermatitis enteropathica, dog","secondary_identifiers":["OMIA:000593-9615"],"termid":"MONDO:1010757","xrefs":{"Monarch":{"xref_id":"1010757"}}}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: PBO:0054185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1560","termid":"PBO:0054185"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: FYPO:0001805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adenine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal adenine import","synonyms":[{"name":"normal adenine import across plasma membrane","type":"exact"},{"name":"normal adenine import during mitotic cell cycle","type":"related"},{"name":"normal adenine import during vegetative growth","type":"exact"},{"name":"normal adenine import into cell","type":"exact"},{"name":"normal adenine uptake","type":"exact"}],"termid":"FYPO:0001805"}


id: MONDO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4A (CMT4A) is a subtype of Charcot-Marie-Tooth disease type 4 characterized by early-onset (infancy to early childhood) of severe, rapidly progressing demyelinating, axonal, or intermediate sensorimotor neuropathy usually affecting first, and more severely, the distal lower extremities and later the proximal muscles and upper extremities. Nerve conduction velocities range from very slow to normal. Apart from the typical CMT phenotype (distal muscle weakness and atrophy, sensory loss, frequent pes cavus foot deformity), patients commonly present delayed motor development, vocal cord paresis, mild sensory loss, abolished deep tendon reflexes, and skeletal deformities.","definition_xrefs":["Orphanet:99948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease recessive intermediate A","termid":"MONDO:0012014"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 4","termid":"MONDO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4A","secondary_identifiers":["icd11.foundation:1476665103","SCTID:715796006","GARD:1252","MEDGEN:347821","OMIM:214400","UMLS:C1859198","DOID:0110185","MESH:C535419"],"synonyms":[{"name":"CMT4A","type":"exact"},{"name":"Charcot Marie Tooth disease type 4A","type":"related"},{"name":"Charcot-Marie-Tooth disease type 4 caused by mutation in GDAP1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, autosomal recessive, type 4A","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 4A","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 4A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 4A","type":"related"},{"name":"GDAP1 Charcot-Marie-Tooth disease type 4","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth disease type 4A","type":"exact"}],"termid":"MONDO:0008961","xrefs":{"Monarch":{"xref_id":"0008961"}}}


id: PBO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Cdc10","termid":"PBO:0004192"}


id: MONDO:0018322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HSD10 disease, infantile type is a clinical subtype of HSD10 disease, a rare neurometabolic disorder. It is characterized by normal early development until 6-18 months of life, followed by progressive neurodegeneration manifesting with developmental regression, progressive visual and hearing troubles, seizures, epilepsy, severe cardiomyopathy, lethargy, hypotonia, poor feeding, choreoathetosis, and movement disorders. Elevated blood levels of isoleucine metabolites and their excretion in urine are reported. The disease is usually fatal around 2-4 years of age.","definition_xrefs":["Orphanet:391428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, infantile type","secondary_identifiers":["GARD:17622","UMLS:C5680025","MEDGEN:1843150"],"synonyms":[{"name":"2-methyl-3-hydroxybutyric aciduria, classic type","type":"exact"},{"name":"2-methyl-3-hydroxybutyric aciduria, infantile type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, classic type","type":"exact"},{"name":"2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency, infantile type","type":"exact"},{"name":"HSD10 deficiency, classic type","type":"exact"},{"name":"HSD10 deficiency, infantile type","type":"exact"},{"name":"HSD10 disease, classic type","type":"exact"},{"name":"MHBD deficiency, classic type","type":"exact"},{"name":"MHBD deficiency, infantile type","type":"exact"}],"termid":"MONDO:0018322","xrefs":{"Monarch":{"xref_id":"0018322"}}}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homomethionine, a non-protein amino acid synthesized from L-methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine biosynthetic process","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: GO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinin cascade","synonyms":[{"name":"down regulation of kinin cascade","type":"exact"},{"name":"down-regulation of kinin cascade","type":"exact"},{"name":"downregulation of kinin cascade","type":"exact"},{"name":"inhibition of kinin cascade","type":"narrow"}],"termid":"GO:0002257"}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: GO:1905401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"positively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905401"}


id: PBO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 182 member A","termid":"PBO:0047150"}


id: PBO:0062950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1","termid":"PBO:0062950"}


id: PBO:0087010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 catalytic subunit; removes RNA primers during Okazaki fragment synthesis and errant ribonucleotides misincorporated during DNA replication; role in ribonucleotide excision repair; homolog of RNAse HI; related to human AGS4 which causes Aicardi-Goutieres syndrome","termid":"PBO:0087010"}


id: PBO:0056398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 3","termid":"PBO:0056398"}


id: PBO:0088221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain","termid":"PBO:0088221"}


id: PBO:0072947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 27","termid":"PBO:0072947"}


id: PBO:0058334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4708","termid":"PBO:0058334"}


id: GO:1904135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["PMID:24892953","GOC:dph","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in rhombomere morphogenesis","synonyms":[{"name":"activation of convergent extension involved in rhombomere morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in rhombomere morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in rhombomere morphogenesis","type":"exact"}],"termid":"GO:1904135"}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["RHEA:50192","Reactome:R-HSA-1878002","MetaCyc:2.4.2.26-RXN"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: MONDO:0007026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-alcoholic fatty liver (obsolete MONDO:0007026)","termid":"MONDO:0007026","xrefs":{"Monarch":{"xref_id":"0007026"}}}


id: GO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in lung development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060496"}


id: PBO:0057871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-4","termid":"PBO:0057871"}


id: PBO:0084222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family ATPase; constituent of the import motor component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); involved in protein translocation and folding; subunit of SceI endonuclease; SSC1 has a paralog, ECM10, that arose from the whole genome duplication","termid":"PBO:0084222"}


id: MONDO:0008271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly of an index finger or PPD3 is a form of preaxial polydactyly of fingers, a limb malformation syndrome, where the thumb is replaced by one or two triphalangeal digits with dermatoglyphic pattern specific of the index finger. Two forms of PPD3 have been characterized: unilateral and bilateral. There have been no further descriptions in the literature since 1962.","definition_xrefs":["Orphanet:93337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of an index finger","secondary_identifiers":["MEDGEN:357422","MESH:C566784","OMIM:174600","SCTID:723446006","UMLS:C1868113","icd11.foundation:982050714","GARD:2256"],"synonyms":[{"name":"PPD3","type":"exact"},{"name":"index finger polydactyly","type":"related"},{"name":"polydactyly, preaxial 3","type":"related"},{"name":"polydactyly, preaxial III","type":"related"},{"name":"polydactyly, preaxial type 3","type":"exact"},{"name":"preaxial polydactyly type 3","type":"exact"}],"termid":"MONDO:0008271","xrefs":{"Monarch":{"xref_id":"0008271"}}}


id: MONDO:0003314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of rare neoplasms that arise from the vagina. It includes low grade endometrioid stromal sarcoma and undifferentiated sarcoma.","definition_xrefs":["NCIT:C40269"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms","termid":"MONDO:0037742"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms of the vagina","secondary_identifiers":["MEDGEN:927117","DOID:5171","UMLS:C4289585"],"synonyms":[{"name":"endometrioid stromal and related neoplasms of the vagina","type":"exact"},{"name":"endometrioid stromal and related neoplasms of vagina","type":"exact"},{"name":"endometrioid stromal and related tumors of the vagina","type":"exact"},{"name":"endometrioid stromal and related tumours of the vagina","type":"exact"},{"name":"vagina endometrioid stromal and related neoplasms","type":"exact"},{"name":"vaginal endometrial stromal tumor","type":"related"},{"name":"vaginal endometrial stromal tumour","type":"related"}],"termid":"MONDO:0003314","xrefs":{"Monarch":{"xref_id":"0003314"}}}


id: PBO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 8","termid":"PBO:0080173"}


id: MONDO:0018491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase deficiency","secondary_identifiers":["icd11.foundation:460538363","ICD9:270.7","UMLS:C0580190","Orphanet:422519","MEDGEN:663158","SCTID:303098002"],"termid":"MONDO:0018491","xrefs":{"Monarch":{"xref_id":"0018491"}}}


id: PBO:0046969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member F","termid":"PBO:0046969"}


id: GO:2001077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->3),(1->4)-beta-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->3),(1->4)-beta-glucan binding","synonyms":[{"name":"(1,3),(1,4)-beta-glucan binding","type":"exact"},{"name":"1->3,1->4-beta-glucan binding","type":"exact"},{"name":"beta-(1,3),(1,4)-glucan binding","type":"exact"},{"name":"beta-(1->3),(1->4)-glucan binding","type":"exact"},{"name":"beta-1,3-1,4-glucan binding","type":"exact"},{"name":"beta-1->3,1->4-glucan binding","type":"exact"}],"termid":"GO:2001077"}


id: MONDO:0019255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disorder that affects the lysosomal degradation of the spinhgolipids. Representative examples include Gaucher disease, Tay-Sachs disease, and Niemann-Pick disease.","definition_xrefs":["PMID:21502308","NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sphingolipidosis","secondary_identifiers":["DOID:1927","MEDGEN:52453","UMLS:C0037899","NCIT:C117254","SCTID:238028008","icd11.foundation:1875237176","MESH:D013106","Orphanet:79225","GARD:7672"],"synonyms":[{"name":"sphingolipidoses","type":"exact"}],"termid":"MONDO:0019255","xrefs":{"Monarch":{"xref_id":"0019255"}}}


id: PBO:0029560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Calcofluor_White","termid":"PBO:0029560"}


id: PBO:0068930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 173, pseudogene","termid":"PBO:0068930"}


id: PBO:0081659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 583","termid":"PBO:0081659"}


id: PBO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-67 (pseudogene)","termid":"PBO:0051463"}


id: GO:1901260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any peptidyl-lysine hydroxylation that is involved in bacterial-type EF-P lysine modification.","definition_xrefs":["GOC:TermGenie","PMID:22706199","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine hydroxylation involved in bacterial-type EF-P lysine modification (obsolete GO:1901260)","synonyms":[{"name":"EF-P lysine hydroxylation","type":"related"}],"termid":"GO:1901260"}


id: PBO:0113489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator of a variety of genes; critical sensor of genotoxic stress; phosphorylation by protein kinase A stimulates Opi1p function in negative regulation of phospholipid biosynthetic genes; involved in telomere maintenance; null exhibits disrupted mitochondrial metabolism and low cardiolipin content, strongly correlated with overproduction of inositol; binds to phosphatidic acid","termid":"PBO:0113489"}


id: PBO:0065225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 5 like","termid":"PBO:0065225"}


id: GO:0021735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate nucleus development","termid":"GO:0021735"}


id: GO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.","definition_xrefs":["EC:3.1.2.15","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin thiolesterase activity (obsolete GO:0004221)","synonyms":[{"name":"ubiquitin C-terminal hydrolase activity","type":"related"},{"name":"ubiquitin carboxy-terminal esterase activity","type":"related"},{"name":"ubiquitin carboxy-terminal hydrolase activity","type":"related"},{"name":"ubiquitin thioesterase activity","type":"related"},{"name":"ubiquitin thiolesterase activity","type":"exact"},{"name":"ubiquitin-C-terminal-thioester hydrolase activity","type":"related"},{"name":"ubiquitinyl hydrolase 1 activity","type":"narrow"}],"termid":"GO:0004221"}


id: PR:Q9URV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit e, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.05c","synonyms":[{"name":"ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tim11","type":"exact"},{"name":"translocase of the inner membrane protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URV6"}


id: PBO:0080308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 72 pseudogene","termid":"PBO:0080308"}


id: PBO:0029227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_EPC","termid":"PBO:0029227"}


id: PBO:0089149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF126 ortholog","termid":"PBO:0089149"}


id: PBO:0067727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 25","termid":"PBO:0067727"}


id: PR:Q9Y7V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7V0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 117 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.11c","synonyms":[{"name":"Spom972h-mug117","type":"exact"}],"termid":"PR:Q9Y7V0"}


id: PBO:0064106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"praja ring finger ubiquitin ligase 2","termid":"PBO:0064106"}


id: PBO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (predicted)","termid":"PBO:0001295"}


id: GO:0061433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of caloric restriction, insufficient food energy intake.","definition_xrefs":["GOC:dph","PMID:17914901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to caloric restriction","termid":"GO:0061771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caloric restriction","termid":"GO:0061433"}


id: GO:1990355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"gene_count":0,"genotype_count":0,"name":"obsolete L-methionine salvage from methionine sulphoxide (obsolete GO:1990355)","synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355"}


id: PBO:0076524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 pseudogene","termid":"PBO:0076524"}


id: PBO:0119272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP3","termid":"PBO:0119272"}


id: FYPO:0002201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable stubby vegetative cell population (obsolete FYPO:0002201)","synonyms":[{"name":"stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002201"}


id: GO:0102046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichlorobenzoate + O2 + a reduced electron acceptor = 3,4-dichlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["PMID:9322760","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3,4-dichlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10427"],"termid":"GO:0102046"}


id: PBO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex ATP-dependent RNA helicase Rqt2, human ASCC3 ortholog","termid":"PBO:0110070"}


id: MONDO:0014992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly (disease) in which the cause of the disease is a mutation in the TMTC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 8","secondary_identifiers":["MEDGEN:934613","OMIM:617255","DOID:0112233","UMLS:C4310646"],"synonyms":[{"name":"LIS8","type":"exact"},{"name":"TMTC3 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in TMTC3","type":"exact"},{"name":"lissencephaly 8","type":"exact"},{"name":"lissencephaly 8; LIS8","type":"exact"},{"name":"lissencephaly type 8","type":"exact"}],"termid":"MONDO:0014992","xrefs":{"Monarch":{"xref_id":"0014992"}}}


id: GO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs directed at self antigens.","definition_xrefs":["ISBN:0781735149","PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central tolerance induction","termid":"GO:0002508"},{"relation_name":"is_a","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction to self antigen","termid":"GO:0002509"}


id: MONDO:0024349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prevalent and benign dermatological condition that predominantly affects children and adolescents. The name \\\"pityriasis alba\\\" derives from its appearance, where \\\"pityriasis\\\" denotes the fine scales and \\\"alba\\\" signifies the pale color (hypopigmentation).","definition_xrefs":["PMID:28613715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis alba","secondary_identifiers":["ICD9:696.5","SCTID:402296004","UMLS:C0085657","MEDGEN:39322","icd11.foundation:1386947078"],"termid":"MONDO:0024349","xrefs":{"Monarch":{"xref_id":"0024349"}}}


id: PBO:0005131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Alp16","termid":"PBO:0005131"}


id: PATO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides.","definition_xrefs":["Merriam-Webster:hexagonal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexagonal","termid":"PATO:0002509"}


id: GO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha7-beta1 integrin complex bound to focal adhesion kinase.","definition_xrefs":["PMID:17598176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha7-beta1 integrin-focal adhesion kinase complex","synonyms":[{"name":"ITGA7-ITGB1-PTK2 complex","type":"narrow"}],"termid":"GO:0071135"}


id: PR:P0CY17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat1-Mc gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CY17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.09","synonyms":[{"name":"Spom972h-mat1-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY17"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: GO:1901705
data:
  {"annotated_genes":["SJAG_04149","SJAG_06635","SJAG_00107","SJAG_00830","SJAG_00396","SJAG_04098","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90150,102822,103305,107879,110008,110678,112843],"is_not":false,"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705","terms_by_termid":{"GO:1901705":null}}


id: MONDO:0015967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that is caused by mutations in a single gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"monogenic diabetes","secondary_identifiers":["UMLS:C3888631","MEDGEN:1392102","Orphanet:183625","EFO:1001511","NCIT:C129739"],"synonyms":[{"name":"monogenic diabetes","type":"exact"},{"name":"rare genetic diabetes mellitus","type":"exact"}],"termid":"MONDO:0015967","xrefs":{"Monarch":{"xref_id":"0015967"}}}


id: MONDO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant inherited disorder characterized by the presence of small areas of increased density throughout the bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosclerosis","termid":"MONDO:0002933"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopoikilosis","secondary_identifiers":["DOID:11991","HP:0010739","icd11.foundation:801926378","NANDO:2201024","UMLS:C0029455","NCIT:C84985","MEDGEN:45251","ICD9:756.53","MESH:D010023","SCTID:9147009"],"synonyms":[{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis","type":"exact"},{"name":"osteopoikilosis (disease)","type":"exact"},{"name":"spotted bones","type":"related"}],"termid":"MONDO:0001414","xrefs":{"Monarch":{"xref_id":"0001414"}}}


id: PBO:0076223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene 2","termid":"PBO:0076223"}


id: GO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerate + CO2 + NAD(P)+ = NAD(P)H + H+ + 2-hydroxy-3-oxosuccinate.","definition_xrefs":["EC:1.1.1.92","MetaCyc:1.1.1.92-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxaloglycolate reductase (decarboxylating) activity","synonyms":[{"name":"D-glycerate:NAD(P)+ oxidoreductase (carboxylating)","type":"related"}],"termid":"GO:0047047"}


id: MONDO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elejalde syndrome (ES) is characterized by silvery to leaden hair, bronze skin color in sun-exposed areas and severe neurological impairment.","definition_xrefs":["Orphanet:33445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal melanolysosomal disease","secondary_identifiers":["UMLS:C1860157","GARD:16630","icd11.foundation:771734461","SCTID:724091002","MESH:C536203","OMIM:256710","MEDGEN:348553"],"synonyms":[{"name":"ELEJALDE disease","type":"related"},{"name":"Elejalde disease","type":"exact"},{"name":"neuroectodermal melanolysosomal disease","type":"exact"}],"termid":"MONDO:0009742","xrefs":{"Monarch":{"xref_id":"0009742"}}}


id: MOD:02024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a cervonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"cervonoylated residue","termid":"MOD:02024"}


id: MONDO:0859168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, myofibrillar, 12, infantile-onset, with cardiomyopathy","secondary_identifiers":["OMIM:619424","MEDGEN:1794147","UMLS:C5561937"],"termid":"MONDO:0859168","xrefs":{"Monarch":{"xref_id":"0859168"}}}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: MONDO:1011479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker type muscular dystrophy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"},{"relation_name":"is_a","term_name":"Becker type muscular dystrophy, non-human animal","termid":"MONDO:1011435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Becker type muscular dystrophy, dog","secondary_identifiers":["OMIA:001888-9615"],"termid":"MONDO:1011479","xrefs":{"Monarch":{"xref_id":"1011479"}}}


id: PBO:0052798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 38","termid":"PBO:0052798"}


id: PBO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein Dop1","termid":"PBO:0031869"}


id: GO:0034391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"regulation of SMC apoptosis","type":"exact"},{"name":"regulation of smooth muscle cell apoptosis","type":"narrow"}],"termid":"GO:0034391"}


id: GO:0035852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a horizontal cell is transported to, and/or maintained in, a specific location within the inner nuclear layer (INL) of the retina. A horizontal cell is a neuron that laterally connects other neurons in the inner nuclear layer (INL) of the retina. Targeting of retinal neurons to the appropriate lamina is vital to establish the architecture of the retina.","definition_xrefs":["PMID:18094249","GOC:yaf","CL:0000745","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization of cell","termid":"GO:0051674"},{"relation_name":"part_of","term_name":"retina layer formation","termid":"GO:0010842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"horizontal cell localization","synonyms":[{"name":"horizontal cell localisation","type":"exact"},{"name":"horizontal cell positioning","type":"exact"},{"name":"laminar positioning of retinal horizontal cell","type":"exact"},{"name":"retinal horizontal cell positioning","type":"exact"}],"termid":"GO:0035852"}


id: PBO:0088723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein folding protein","termid":"PBO:0088723"}


id: GO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'-GMP + H2O = guanosine + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GMP 5'-nucleotidase activity (obsolete GO:0050484)","secondary_identifiers":["MetaCyc:RXN-7609"],"synonyms":[{"name":"GMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050484"}


id: PBO:0041570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 putative open reading frame 181","termid":"PBO:0041570"}


id: PBO:0057361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-1","termid":"PBO:0057361"}


id: GO:1990680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a melanocyte-stimulating hormone stimulus. The binding of any one of three melanocyte-stimulating hormones causes dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["PMID:17036007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to melanocyte-stimulating hormone","synonyms":[{"name":"response to MSH","type":"exact"}],"termid":"GO:1990680"}


id: PBO:0075097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 146","termid":"PBO:0075097"}


id: PBO:0110028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 10","termid":"PBO:0110028"}


id: MOD:01183
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-selenocysteine residues to form L-selenocystine,","definition_xrefs":["ChEBI:28553","RESID:AA0437","PubMed:17715293","PubMed:6076213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocystine (oxidized selenocysteine) (Sec-Sec)","synonyms":[{"name":"(R,R)-3,3'-diselane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobisalanine","type":"exact"},{"name":"3,3'-diselenodialanine","type":"exact"},{"name":"CROSSLNK Selenocystine (Sec-Sec)","type":"exact"},{"name":"L-selenocystine","type":"exact"},{"name":"Sec2","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldiselenide","type":"exact"},{"name":"beta,beta'-diselenodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-diselenide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)diselenide","type":"exact"},{"name":"diselenocysteine","type":"exact"},{"name":"selenium cystine","type":"exact"}],"termid":"MOD:01183"}


id: PBO:0080262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 25 pseudogene","termid":"PBO:0080262"}


id: PBO:0116790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesin","termid":"PBO:0116790"}


id: GO:1990359
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93245,93244],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a zinc ion stimulus.","definition_xrefs":["GOC:kmv","PMID:17888400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc ion stress","type":"exact"},{"name":"response to zinc toxicity","type":"related"},{"name":"stress response to zinc","type":"broad"}],"termid":"GO:1990359","terms_by_termid":{"GO:0010312":null}}


id: GO:0045122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aflatoxin, a fungal metabolite found as a contaminant in moldy grains that induces liver cancer. Aflatoxin induces a G to T transversion at codon 249 of p53, leading to its inactivation. Aflatoxin is converted to a chemical carcinogen by P450.","definition_xrefs":["ISBN:0815316194","PMID:15006741","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"aflatoxin metabolic process","termid":"GO:0046222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aflatoxin biosynthetic process","synonyms":[{"name":"aflatoxin anabolism","type":"exact"},{"name":"aflatoxin biosynthesis","type":"exact"},{"name":"aflatoxin formation","type":"exact"},{"name":"aflatoxin synthesis","type":"exact"}],"termid":"GO:0045122"}


id: GO:0070449
data:
  {"annotated_genes":["SJAG_03211","SJAG_00540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64637,78171],"is_not":false,"summary":null,"term":"GO:0070449"}]},"cv_name":"cellular_component","definition":"A transcription elongation factor complex that suppresses RNA polymerase II pausing, and may act by promoting proper alignment of the 3'-end of nascent transcripts with the polymerase catalytic site. Consists of a transcriptionally active Elongin A subunit (about 100 kDa) and two smaller Elongin B (about 18 kDa) and Elongin C (about 15 kDa) subunits.","definition_xrefs":["PMID:12676794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00540":null,"SJAG_03211":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"elongin complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"elongin (SIII) complex","type":"exact"},{"name":"transcription elongation factor SIII complex","type":"exact"},{"name":"transcription factor B (SIII) complex","type":"exact"}],"termid":"GO:0070449","terms_by_termid":{"GO:0070449":null}}


id: GO:0006626
data:
  {"annotated_genes":["SJAG_03648","SJAG_02809","SJAG_02397","SJAG_01004","SJAG_04641","SJAG_07010","SJAG_05259","SJAG_04072","SJAG_04533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68631,97898,101986],"is_not":false,"summary":null,"term":"GO:0006626"},{"annotations":[101732,79970,81751,78605,82136,71594],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards and into the mitochondrion, usually mediated by mitochondrial proteins that recognize signals contained within the imported protein.","definition_xrefs":["ISBN:0716731363","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01004":null,"SJAG_02397":null,"SJAG_02809":null,"SJAG_03648":null,"SJAG_04072":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_05259":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein targeting to mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043681","Reactome:R-HSA-1268020"],"synonyms":[{"name":"mitochondrial protein import","type":"related"},{"name":"mitochondrial translocation","type":"related"},{"name":"protein import into mitochondrion","type":"exact"},{"name":"protein targeting to mitochondria","type":"exact"},{"name":"protein-mitochondrial targeting","type":"exact"}],"termid":"GO:0006626","terms_by_termid":{"GO:0006626":null,"GO:0006627":null}}


id: MONDO:0032786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"Noonan syndrome 11","secondary_identifiers":["NCIT:C177119","UMLS:C5193130","GARD:16357","OMIM:618499","DOID:0112169","MEDGEN:1681177"],"synonyms":[{"name":"NOONAN SYNDROME 11","type":"related"},{"name":"NS11","type":"related"}],"termid":"MONDO:0032786","xrefs":{"Monarch":{"xref_id":"0032786"}}}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN","KEGG_REACTION:R01174"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: PBO:0065386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PC4 and SRSF1 interacting protein 1","termid":"PBO:0065386"}


id: GO:0007007
data:
  {"annotated_genes":["SJAG_01120","SJAG_05300","SJAG_02398","SJAG_03515","SJAG_02028","SJAG_04208","SJAG_04996","SJAG_02524","SJAG_01405","SJAG_02501","SJAG_01917","SJAG_05302","SJAG_04237","SJAG_06468","SJAG_03633","SJAG_02002","SJAG_04965","SJAG_00687","SJAG_03502","SJAG_03282","SJAG_01949","SJAG_05241","SJAG_02656","SJAG_01640","SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77295,91959],"is_not":false,"summary":null,"term":"GO:0007007"},{"annotations":[80777,76824,88959,80401,101228,106873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[104451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[58405,115869,102452,75195,107121,79557,88112,75741,107145,112786,77477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[76242,58530,80068,80326,80387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane.","definition_xrefs":["GOC:jl","GOC:mah","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_03282":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"inner mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"inner mitochondrial membrane organisation","type":"exact"},{"name":"inner mitochondrial membrane organization and biogenesis","type":"related"},{"name":"mitochondrial inner membrane organization","type":"exact"}],"termid":"GO:0007007","terms_by_termid":{"GO:0007007":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:1990627":null}}


id: MONDO:0031422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mucolipidosis","termid":"MONDO:0019248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"familial mucolipidosis","secondary_identifiers":["OMIMPS:256550"],"termid":"MONDO:0031422","xrefs":{"Monarch":{"xref_id":"0031422"}}}


id: FYPO:0006571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah","PMID:9614176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity during cellular response to pheromone","termid":"FYPO:0006571"}


id: PATO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001139 urine glucose composition (obsolete PATO:0001139)","termid":"PATO:0001139"}


id: PBO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_phenotype","termid":"PBO:0031423"}


id: PBO:0114360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Nrg1","termid":"PBO:0114360"}


id: PBO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 2","termid":"PBO:0060055"}


id: PBO:0084300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in strain S288C; unlike other forms of invertase, Suc7p is unable to hydrolyze raffinose","termid":"PBO:0084300"}


id: MONDO:0006764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningitis caused by fungal agents which may occur as opportunistic infections or arise in immunocompetent hosts.","definition_xrefs":["MESH:D016921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal meningitis","secondary_identifiers":["SCTID:24321005","UMLS:C0085438","MedDRA:10017538","EFO:1000942","MEDGEN:39285","DOID:11608","icd11.foundation:1137081791","ICD9:321.1","ICD9:117.9"],"synonyms":[{"name":"Fungi caused infectious meningitis","type":"exact"},{"name":"Fungi infectious meningitis","type":"exact"}],"termid":"MONDO:0006764","xrefs":{"Monarch":{"xref_id":"0006764"}}}


id: GO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormones modulates the force of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormonal regulation of the force of heart contraction","synonyms":[{"name":"hormonal cardiac inotropy","type":"exact"},{"name":"hormonal regulation of the force of heart muscle contraction","type":"related"}],"termid":"GO:0003058"}


id: PBO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 10","termid":"PBO:0072080"}


id: GO:0006463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.","definition_xrefs":["Wikipedia:Steroid_hormone_receptor","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"steroid hormone receptor complex assembly","termid":"GO:0006463"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: PR:Q9UQW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-CoA acetyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR18919:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.09c","secondary_identifiers":["UniProtKB:Q9UQW6"],"synonyms":[{"name":"SPBC215.09c","type":"related"},{"name":"Spom972h-ACAT1","type":"exact"},{"name":"acetoacetyl-CoA thiolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UQW6"}


id: MONDO:1012667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by qualitative abnormalities of the glycoprotein von Willebrand factor (vWF) and moderate to severe bleeding due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001339-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease II, dog","termid":"MONDO:1012667","xrefs":{"Monarch":{"xref_id":"1012667"}}}


id: PBO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog Of Bin","termid":"PBO:0003529"}


id: GO:0009384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["EC:2.7.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"N-acylmannosamine kinase activity","secondary_identifiers":["Reactome:R-HSA-4088322","RHEA:23832","MetaCyc:N-ACYLMANNOSAMINE-KINASE-RXN","Reactome:R-HSA-4085028"],"synonyms":[{"name":"ATP:N-acetylmannosamine 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acyl-D-mannosamine 6-phosphotransferase activity","type":"related"},{"name":"N-acetylmannosamine kinase activity","type":"related"},{"name":"N-acyl-D-mannosamine kinase activity","type":"related"},{"name":"acetylamidodeoxymannokinase activity","type":"related"},{"name":"acetylmannosamine kinase activity","type":"related"},{"name":"acylaminodeoxymannokinase activity","type":"related"},{"name":"acylmannosamine kinase (phosphorylating)","type":"related"},{"name":"acylmannosamine kinase activity","type":"related"}],"termid":"GO:0009384"}


id: PBO:0011150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatase Ptn1","termid":"PBO:0011150"}


id: PBO:0058796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7702","termid":"PBO:0058796"}


id: GO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of tryptophan, catalyzed by the enzyme tryptophanase (EC:4.1.99.1).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptophan catabolic process, using tryptophanase (obsolete GO:0019443)","synonyms":[{"name":"tryptophan breakdown, using tryptophanase","type":"exact"},{"name":"tryptophan catabolic process, using tryptophanase","type":"exact"},{"name":"tryptophan degradation, using tryptophanase","type":"exact"}],"termid":"GO:0019443"}


id: GO:1901580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901580)","synonyms":[{"name":"regulation of telomeric RNA transcription from Pol II promoter","type":"exact"}],"termid":"GO:1901580"}


id: PATO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000490 rhythym value (obsolete PATO:0000490)","termid":"PATO:0000490"}


id: PR:Q9UUA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipid phosphatase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02751","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol pyrophosphate phosphatase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.18","secondary_identifiers":["UniProtKB:Q9UUA6"],"synonyms":[{"name":"DGPP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLPP4","type":"exact"},{"name":"phosphatidate phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUA6"}


id: MONDO:0007299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sotos syndrome 1 (obsolete MONDO:0007299)","termid":"MONDO:0007299","xrefs":{"Monarch":{"xref_id":"0007299"}}}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: PBO:0068449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 23, pseudogene","termid":"PBO:0068449"}


id: SO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A diplotype is a pair of haplotypes from a given individual. It is a genotype where the phase is known.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diplotype","termid":"SO:0001028"}


id: GO:0000706
data:
  {"annotated_genes":["SJAG_01832","SJAG_01076","SJAG_05295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81157,107304,116407],"is_not":false,"summary":null,"term":"GO:0000706"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs. This takes place during meiosis.","definition_xrefs":["PMID:9334324","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01832":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000706","terms_by_termid":{"GO:0000706":null}}


id: CHEBI:29321
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium nitroprusside","termid":"CHEBI:29321"}


id: PBO:0114274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (FoldSeek), possible PF15874 family (Pfam-N)","termid":"PBO:0114274"}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: PBO:0029505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_tapered_cells_(obsolete_FYPO:0002210)","termid":"PBO:0029505"}


id: GO:0015199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of betaine from one side of a membrane to the other. Betaine is the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"amino-acid betaine transmembrane transporter activity","synonyms":[{"name":"betaine transmembrane transporter activity","type":"exact"},{"name":"betaine/GABA:sodium symporter activity","type":"narrow"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015199"}


id: PBO:0113217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Modulator of cellular lipid distribution; localizes to ER-PM and ER-mitochondria contact sites; shares homology with lipid transfer proteins Vps13p and Atg2p; homolog of D. melanogaster Hobbit protein","termid":"PBO:0113217"}


id: GO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of myelin sheath","termid":"GO:0019911"}


id: PR:C6Y4C8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vma21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.16","synonyms":[{"name":"Spom972h-vma21","type":"exact"}],"termid":"PR:C6Y4C8"}


id: PBO:0055639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3078","termid":"PBO:0055639"}


id: PBO:0060724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A11","termid":"PBO:0060724"}


id: PBO:0086613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein co-localizes with clathrin-coated vesicles; YHL017W has a paralog, PTM1, that arose from the whole genome duplication","termid":"PBO:0086613"}


id: GO:0046686
data:
  {"annotated_genes":["SJAG_00044","SJAG_01351","SJAG_00988","SJAG_01344","SJAG_02599","SJAG_03497","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92781,107991,72607,96555,117821,96517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[88340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cadmium sensitivity/resistance","type":"related"},{"name":"response to cadmium","type":"exact"}],"termid":"GO:0046686","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: PBO:0109085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1 like, pseudogene","termid":"PBO:0109085"}


id: PBO:0082026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type containing 3","termid":"PBO:0082026"}


id: PBO:0084098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity; involved in the cell integrity signaling pathway; interacts with Rgl1p; localization of Tus1p to the bed neck is regulated by Rgl1p; multicopy suppressor of tor2 mutation and ypk1 ypk2 double mutation; potential Cdc28p substrate","termid":"PBO:0084098"}


id: GO:0033122
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77912,74846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide catabolic process","termid":"GO:0030812"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of purine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"negative regulation of purine nucleotide breakdown","type":"exact"},{"name":"negative regulation of purine nucleotide catabolism","type":"exact"},{"name":"negative regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033122","terms_by_termid":{"GO:0045820":null}}


id: GO:0018550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3,5,6-tetrachlorohydroquinone + 2 glutathione = 2,3,6-trichlorohydroquinone + glutathione disulfide + HCl.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachloro-p-hydroquinone reductive dehalogenase activity (obsolete GO:0018550)","synonyms":[{"name":"tetrachlorohydroquinone reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018550"}


id: MONDO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete factor VIII deficiency (obsolete MONDO:0007596)","termid":"MONDO:0007596","xrefs":{"Monarch":{"xref_id":"0007596"}}}


id: PBO:0120007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64, pseudogene","termid":"PBO:0120007"}


id: GO:1901546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"regulation of synaptic vesicle lumen proton loading","type":"exact"}],"termid":"GO:1901546"}


id: GO:0019453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, via the intermediate cystine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine","synonyms":[{"name":"L-cysteine breakdown via cystine","type":"exact"},{"name":"L-cysteine degradation via cystine","type":"exact"}],"termid":"GO:0019453"}


id: MONDO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Natural killer (NK)-cell enteropathy is a benign NK-cell lymphoproliferative disease characterized by minor abdominal symptoms (abdominal pain, diverticulosis, constipation and reflux) due to NK cell-derived lesions in the mucosal layer of the gastrointestinal tract and often mistaken for NK or T-cell lymphoma.","definition_xrefs":["Orphanet:263665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"NK-cell enteropathy","secondary_identifiers":["SCTID:723496007","MEDGEN:1379183","UMLS:C4509932","GARD:20905"],"termid":"MONDO:0016996","xrefs":{"Monarch":{"xref_id":"0016996"}}}


id: MONDO:0859276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism-immunodeficiency-lipodystrophy syndrome","secondary_identifiers":["UMLS:C5774198","OMIM:620005","MEDGEN:1823971"],"termid":"MONDO:0859276","xrefs":{"Monarch":{"xref_id":"0859276"}}}


id: GO:0009257
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107908,112000],"is_not":false,"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"tetrahydrofolate biosynthetic process","termid":"GO:0046654"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0042559","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"10-formyltetrahydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF biosynthesis","type":"exact"},{"name":"10-formyl-THF biosynthetic process","type":"exact"},{"name":"10-formyltetrahydrofolate anabolism","type":"exact"},{"name":"10-formyltetrahydrofolate biosynthesis","type":"exact"},{"name":"10-formyltetrahydrofolate formation","type":"exact"},{"name":"10-formyltetrahydrofolate synthesis","type":"exact"}],"termid":"GO:0009257","terms_by_termid":{"GO:0009257":null}}


id: GO:0097427
data:
  {"annotated_genes":["SJAG_03264","SJAG_03073","SJAG_04841","SJAG_02761","SJAG_02737","SJAG_01196","SJAG_03540","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905720"},{"annotations":[116549,70173,96782,66700,99892,112355,100958,113641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other.","definition_xrefs":["NIF_Subcellular:sao1872343973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"microtubule fascicle","type":"exact"}],"termid":"GO:0097427","terms_by_termid":{"GO:0099070":null,"GO:1905720":null}}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: GO:0008533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds in substrates containing five or more amino acids, preferentially with Ala in P1', and Pro in P2'.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete astacin activity (obsolete GO:0008533)","synonyms":[{"name":"Astacus proteinase activity","type":"related"},{"name":"astacin activity","type":"exact"},{"name":"astacus proteinase activity","type":"narrow"},{"name":"crayfish small-molecule proteinase activity","type":"narrow"}],"termid":"GO:0008533"}


id: MONDO:0023235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete giant congenital nevus (obsolete MONDO:0023235)","termid":"MONDO:0023235","xrefs":{"Monarch":{"xref_id":"0023235"}}}


id: PBO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.2","termid":"PBO:0005459"}


id: MONDO:0035037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disorder of the visual organs (obsolete MONDO:0035037)","secondary_identifiers":["Orphanet:522504"],"termid":"MONDO:0035037","xrefs":{"Monarch":{"xref_id":"0035037"}}}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: GO:0019310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol metabolic process","termid":"GO:0006020"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol catabolic process","secondary_identifiers":["MetaCyc:P562-PWY"],"synonyms":[{"name":"inositol breakdown","type":"exact"},{"name":"inositol catabolism","type":"exact"},{"name":"inositol degradation","type":"exact"},{"name":"myo-inositol catabolic process","type":"narrow"},{"name":"myo-inositol catabolism","type":"narrow"},{"name":"vitamin Bh catabolic process","type":"exact"},{"name":"vitamin Bh catabolism","type":"exact"}],"termid":"GO:0019310"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["Orphanet:293958","UMLS:C4751125","GARD:17351","MEDGEN:1659106","OMIM:614187"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: MONDO:0037149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"HSD10 mitochondrial disease","termid":"MONDO:0010327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"HSD10 disease, atypical type","secondary_identifiers":["Orphanet:85295","UMLS:C5680206","GARD:16749","MEDGEN:1843277"],"synonyms":[{"name":"HSD10 deficiency, atypical type","type":"exact"},{"name":"Syndromic X-linked intellectual disability type 10","type":"exact"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behavior syndrome","type":"broad"},{"name":"X-linked intellectual disability-choreoathetosis-abnormal behaviour syndrome","type":"broad"}],"termid":"MONDO:0037149","xrefs":{"Monarch":{"xref_id":"0037149"}}}


id: MONDO:0010515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meester-Loeys syndrome","secondary_identifiers":["OMIM:300989","MEDGEN:934778","UMLS:C4310811","DOID:0111861","NCIT:C187989"],"synonyms":[{"name":"MRLS","type":"exact"},{"name":"Meester-Loeys syndrome","type":"exact"},{"name":"Meester-Loeys syndrome; MRLS","type":"exact"}],"termid":"MONDO:0010515","xrefs":{"Monarch":{"xref_id":"0010515"}}}


id: PBO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, STAG protein subunit Psc3","termid":"PBO:0090139"}


id: GO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"cardiac conduction system development","termid":"GO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system development","termid":"GO:0003164"}


id: PBO:0114500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; dual roles in NAD+ biosynthesis and the nucleobase salvage pathway; monomeric structure unique to this class of enzymes","termid":"PBO:0114500"}


id: _global:causally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","secondary_identifiers":["RO:0002410"],"termid":"_global:causally_related_to"}


id: MOD:01936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-oleoyl-L-lysine.","definition_xrefs":["RESID:AA0590","PubMed:20942504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-oleoylated residue","termid":"MOD:02011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-oleoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(9Z)-octadec-9-enoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-[(9Z)-1-oxo-9-octadecenyl]lysine","type":"exact"},{"name":"N6-oleoyl-L-lysine","type":"exact"}],"termid":"MOD:01936"}


id: GO:0048380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"down regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate specification","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048380"}


id: PBO:0031903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle-mediated transport protein (predicted)","termid":"PBO:0031903"}


id: GO:0160171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=28 symmetry.","definition_xrefs":["VZ:6057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=28 icosahedral capsid","termid":"GO:0160171"}


id: MONDO:1012439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ear necrosis syndrome, non-human animal","termid":"MONDO:1011709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear necrosis syndrome, pig","secondary_identifiers":["OMIA:001711-9823"],"termid":"MONDO:1012439","xrefs":{"Monarch":{"xref_id":"1012439"}}}


id: MONDO:0018225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic lymphoma kinase (ALK)-positive diffuse large B-cell lymphoma is a very rare variant of diffuse large B-cell lymphoma (DLBCL) mainly affecting middle-aged immunocompetent men and characterized by a consistent primary involvement of lymph nodes (mainly in the cervical and mediastinum lymph nodes) and with infrequent extra nodal involvement of the bone marrow and other extra-nodal sites (head and neck region, liver, spleen, and gastrointestinal tract). It has an aggressive disease course, and is associated with a poor prognosis.","definition_xrefs":["Orphanet:364043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"ALK-positive large B-cell lymphoma","secondary_identifiers":["icd11.foundation:2077559619","SCTID:715950008","UMLS:C1333294","MEDGEN:232429","GARD:21564","ICDO:9737/3","NCIT:C7225"],"synonyms":[{"name":"ALK+ LBCL","type":"exact"},{"name":"ALK+ large B-cell lymphoma","type":"exact"},{"name":"ALK-DLBCL","type":"exact"},{"name":"ALK-positive large B-cell lymphoma","type":"exact"},{"name":"diffuse large B-cell lymphoma with expression of full-length ALK","type":"exact"},{"name":"diffuse large B-cell lymphoma with expression of full-length anaplastic lymphoma kinase","type":"exact"}],"termid":"MONDO:0018225","xrefs":{"Monarch":{"xref_id":"0018225"}}}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: PBO:0041811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARHSP1 divergent transcript","termid":"PBO:0041811"}


id: MONDO:0800307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de la Chapelle dysplasia","secondary_identifiers":["MEDGEN:342529","UMLS:C1850555","icd11.foundation:248590292"],"synonyms":[{"name":"DLCD","type":"exact"}],"termid":"MONDO:0800307","xrefs":{"Monarch":{"xref_id":"0800307"}}}


id: GO:0045041
data:
  {"annotated_genes":["SJAG_01560","SJAG_00564","SJAG_01647","SJAG_02016","SJAG_00196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78849,79474],"is_not":false,"summary":null,"term":"GO:0045041"},{"annotations":[96637,94543,97996],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"}]},"cv_name":"biological_process","definition":"The import of proteins into the space between the inner and outer mitochondrial membranes.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00564":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_02016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"protein import into mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0045043","GO:0045044"],"synonyms":[{"name":"mitochondrial intermembrane space protein import","type":"exact"},{"name":"protein import into mitochondrial IMS","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, direct","type":"narrow"},{"name":"protein import into mitochondrial intermembrane space, nonconservative","type":"narrow"},{"name":"protein transport into mitochondrial IMS","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space","type":"exact"}],"termid":"GO:0045041","terms_by_termid":{"GO:0045041":null,"GO:0160203":null}}


id: GO:0044865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of cell division in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24218612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cell division","synonyms":[{"name":"inhibition by virus of host cell division","type":"narrow"},{"name":"negative regulation by virus of host cell division","type":"narrow"}],"termid":"GO:0044865"}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: PBO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: PBO:0091081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk21/Pdk1","termid":"PBO:0091081"}


id: GO:0050500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + beta-D-galactopyranosyl-(1->3)-N-acetyl-D-glucosamine = N-acetyl-D-glucosamine + alpha-D-galactopyranose 1-phosphate.","definition_xrefs":["MetaCyc:2.4.1.211-RXN","EC:2.4.1.211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1,3-beta-galactosyl-N-acetylhexosamine phosphorylase activity","secondary_identifiers":["RHEA:20285"],"synonyms":[{"name":"beta-1,3-galactosyl-N-acetylhexosamine phosphorylase activity","type":"exact"},{"name":"beta-D-galactopyranosyl-(1,3)-N-acetyl-D-hexosamine:phosphate galactosyltransferase activity","type":"related"},{"name":"beta-D-galactopyranosyl-(1->3)-N-acetyl-D-hexosamine:phosphate galactosyltransferase activity","type":"related"}],"termid":"GO:0050500"}


id: GO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of hydrogen which results from the dissociation by light of water into molecular hydrogen and oxygen. This process is observed in cyanobacteria and microalgae.","definition_xrefs":["GOC:mengo_curators","PMID:20395274","PMID:20692761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen generation via biophotolysis","synonyms":[{"name":"hydrogen biosynthesis via biophotolysis","type":"exact"}],"termid":"GO:0044817"}


id: PBO:0005867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-specific polypeptide Pc","termid":"PBO:0005867"}


id: GO:0090705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a trichome cell.","definition_xrefs":["GOC:tb","PMID:24014871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"trichome papilla","termid":"GO:0090705"}


id: PBO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S20","termid":"PBO:0090717"}


id: PBO:0080460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 4","termid":"PBO:0080460"}


id: FYPO:0001068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of tyrosine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tyrosine import","termid":"FYPO:0001067"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased tyrosine import","synonyms":[{"name":"decreased L-tyrosine import","type":"exact"},{"name":"decreased L-tyrosine import across plasma membrane","type":"exact"},{"name":"decreased tyrosine import during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine import during vegetative growth","type":"exact"},{"name":"decreased tyrosine import into cell","type":"exact"},{"name":"decreased tyrosine uptake","type":"exact"},{"name":"reduced tyrosine import","type":"exact"}],"termid":"FYPO:0001068"}


id: PBO:0085047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein involved in pre-mRNA splicing; component of a complex containing Cef1p; has similarity to S. pombe Cwf15p","termid":"PBO:0085047"}


id: MONDO:0019751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders of the innate immune system characterized by attacks of seemingly unprovoked inflammation without significant levels of either autoantibodies or autoreactive T cells more characteristic of autoimmune disease.","definition_xrefs":["NCIT:C119050","PMID:23827249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome","secondary_identifiers":["ICD10CM:M04-M04","UMLS:C3890737","MedDRA:10072220","GARD:19234","NANDO:2100156","MEDGEN:855741","Orphanet:93665"],"termid":"MONDO:0019751","xrefs":{"Monarch":{"xref_id":"0019751"}}}


id: GO:0039559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF7 (interferon regulatory factor-7) by promoting the ubiquitin-dependent degradation of IRF7, mediated by the proteasome.","definition_xrefs":["PMID:17301153","VZ:653"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF7 activity by positive regulation of IRF7 catabolic process (obsolete GO:0039559)","synonyms":[{"name":"promotion by virus of proteosome-dependent IRF7 degradation","type":"exact"}],"termid":"GO:0039559"}


id: FYPO:0007182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, occurs to a lesser extent than normal at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["GO:0070462","PMID:31276301","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"decreased cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule catastrophe at cell tip","type":"related"},{"name":"decreased microtubule plus end shrinkage at cell tip","type":"related"},{"name":"decreased plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"reduced cytoplasmic microtubule depolymerization at plus end at cell tip","type":"exact"}],"termid":"FYPO:0007182"}


id: GO:0140546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to symbiont","termid":"GO:0140546"}


id: MONDO:1011306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiovascular disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306","xrefs":{"Monarch":{"xref_id":"1011306"}}}


id: MONDO:0004443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parachordoma arising from the chest wall.","definition_xrefs":["NCIT:C6720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parachordoma","termid":"MONDO:0006351"},{"relation_name":"is_a","term_name":"neoplasm of chest wall","termid":"MONDO:0021388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chest wall parachordoma","secondary_identifiers":["DOID:8043","UMLS:C1332934","MEDGEN:232339"],"synonyms":[{"name":"chest wall parachordoma","type":"exact"},{"name":"parachordoma of chest wall","type":"exact"},{"name":"parachordoma of the chest wall","type":"exact"}],"termid":"MONDO:0004443","xrefs":{"Monarch":{"xref_id":"0004443"}}}


id: PR:000050544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the gtr2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC777.05","termid":"PR:000050544"}


id: PBO:0063041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner and localizer of BRCA2","termid":"PBO:0063041"}


id: PBO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 19","termid":"PBO:0070763"}


id: GO:0006849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyruvate, 2-oxopropanoate, across a plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate transmembrane transport","termid":"GO:1901475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"plasma membrane pyruvate transport","termid":"GO:0006849"}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: GO:0110147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["PMID:24115911","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by nickel ion transfer (obsolete GO:0110147)","termid":"GO:0110147"}


id: PBO:0026774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0026774"}


id: GO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140677","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"opioid peptide activity","termid":"GO:0001515"}


id: PBO:0045978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 4","termid":"PBO:0045978"}


id: MONDO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anterior ischemic optic neuropathy (AION) is an eye disease characterized by infarction of the optic disk leading to vision loss. It can be nonarteritic (nonarteritic anterior ischemic optic neuropathy or NAION) or arteritic, the latter being associated with giant cell arteritis (GCA; often termed temporal arteritis). Vision loss with both varieties is typically rapid (over minutes, hours, or days) and painless. Symptoms such as a general feeling of being unwell (malaise), muscle aches and pains, headaches over the temple, pain when combing hair, pain in the jaw after chewing, and tenderness over the temporal artery (one of the major arteries of the head) may be present with giant cell arteritis. At exam, visual acuity is reduced and the optic disk is swollen. In both subtypes, visual field examination is often reduced in the inferior and central visual fields. The visual loss is usually permanent, with some recovery possibly occurring within the first weeks or months. The arteritic variety is treated with corticosteroids. Treatment of the nonarteritic variety withaspirinor corticosteroids has not been helpful.","direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior ischemic optic neuropathy","secondary_identifiers":["MedDRA:10068250","MESH:D018917","GARD:9790","DOID:12010","EFO:1000809","icd11.foundation:632323575","ICD9:377.41","MEDGEN:199716","SCTID:404659001","UMLS:C0751711"],"synonyms":[{"name":"aion","type":"related"},{"name":"ischaemic optic neuropathy","type":"exact"},{"name":"ischemic optic neuropathy","type":"exact"},{"name":"optic disc infarction leading to vision loss","type":"related"},{"name":"optic disk infarction leading to vision loss","type":"related"}],"termid":"MONDO:0006649","xrefs":{"Monarch":{"xref_id":"0006649"}}}


id: PBO:0055307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2734","termid":"PBO:0055307"}


id: PBO:0028905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028905"}


id: GO:1990198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex containing two ModE subunits. Binds directly to DNA to regulate transcription, and is involved in (positively and negatively) regulating various aspects of molybdenum metabolism.","definition_xrefs":["PMID:12581638","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"ModE complex","synonyms":[{"name":"ModE dimer","type":"exact"}],"termid":"GO:1990198"}


id: MOD:01246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00812 after formula correction. Remap to MOD:00812.","definition_xrefs":["PubMed:15189151","PubMed:3578767","PubMed:3311742","Unimod:295#S","PubMed:11344537"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01246 fucosylated -site S (obsolete MOD:01246)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01246"}


id: GO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin metabolic process","termid":"GO:0042428"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin biosynthetic process","secondary_identifiers":["Wikipedia:Serotonin"],"synonyms":[{"name":"serotonin anabolism","type":"exact"},{"name":"serotonin biosynthesis","type":"exact"},{"name":"serotonin formation","type":"exact"},{"name":"serotonin synthesis","type":"exact"}],"termid":"GO:0042427"}


id: PBO:0087531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; protein abundance increases in response to DNA replication stress","termid":"PBO:0087531"}


id: GO:0019058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.","definition_xrefs":["ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral life cycle","secondary_identifiers":["GO:0019067","Reactome:R-HSA-9609646","Reactome:R-HSA-168255","Reactome:R-HSA-162588"],"synonyms":[{"name":"lytic viral life cycle","type":"related"},{"name":"viral assembly, maturation, egress, and release","type":"narrow"},{"name":"viral infectious cycle","type":"related"},{"name":"viral replication","type":"related"}],"termid":"GO:0019058"}


id: MONDO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the peripheral nerves.","definition_xrefs":["NCIT:C27507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system hemangioma","termid":"MONDO:0003241"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of peripheral nerve","secondary_identifiers":["MEDGEN:232595","UMLS:C1333956","DOID:482"],"synonyms":[{"name":"hemangioma of nerve","type":"exact"},{"name":"hemangioma of peripheral nerve","type":"exact"},{"name":"nerve hemangioma","type":"exact"}],"termid":"MONDO:0003154","xrefs":{"Monarch":{"xref_id":"0003154"}}}


id: PBO:0074058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A36 pseudogene 1","termid":"PBO:0074058"}


id: MONDO:1011625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, goat","secondary_identifiers":["OMIA:001283-9925"],"termid":"MONDO:1011625","xrefs":{"Monarch":{"xref_id":"1011625"}}}


id: PBO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 21","termid":"PBO:0060001"}


id: PR:O94455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.14c gene.","definition_xrefs":["UniProtKB:O94455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C1687.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.14c","synonyms":[{"name":"Spom972h-SPAC1687.14c","type":"exact"}],"termid":"PR:O94455"}


id: PBO:0080155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vinculin","termid":"PBO:0080155"}


id: PBO:0075786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 8C, pseudogene","termid":"PBO:0075786"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: PBO:0091136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex assembly factor, LYR family Fmc1","termid":"PBO:0091136"}


id: GO:0050991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-threonine to form O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-threonine (obsolete GO:0050991)","termid":"GO:0050991"}


id: GO:1901374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an acetate ester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acetate ester transport","termid":"GO:1901374"}


id: MONDO:0010711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect during embryogenesis syndrome characterized by Robin sequence (micrognathia, glossoptosis, and cleft palate), atrial septal defect, persistence of the left superior vena cava, and talipes equinovarus. The phenotype is variable, some patients present with further dysmorphic characteristics (e.g. hypertelorism, ear abnormalities) while others do not have any key findings. Additional features, such as syndactyly, polydactyly, or brain anomalies (e.g. cerebellar hypoplasia), have also been reported. The syndrome is almost invariably lethal with affected males either dying prenatally or living just a few months.","definition_xrefs":["Orphanet:2886"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"TARP syndrome","secondary_identifiers":["MEDGEN:333324","MESH:C536942","GARD:10089","OMIM:311900","SCTID:725911008","UMLS:C1839463","DOID:0111780"],"synonyms":[{"name":"Pierre Robin sequence - congenital heart defect - talipes","type":"related"},{"name":"Pierre Robin sequence-congenital heart defect-talipes syndrome","type":"exact"},{"name":"Pierre Robin syndrome - congenital heart defect - talipes","type":"related"},{"name":"Pierre Robin syndrome with congenital heart malformation and clubfoot","type":"related"},{"name":"Pierre Robin syndrome-congenital heart defect-talipes syndrome","type":"exact"},{"name":"TARP syndrome, X-linked recessive","type":"exact"},{"name":"TARPS","type":"related"},{"name":"talipes equinovarus - atrial septal defect - Robin sequence - persistence of the left superior vena cava","type":"related"},{"name":"talipes equinovarus, atrial septal defect, Robin sequence, and persistence of left Superior vena cava","type":"related"},{"name":"talipes equinovarus-atrial septal defect-Robin sequence-persistence of the left superior vena cava syndrome","type":"exact"},{"name":"tarp syndrome","type":"exact"}],"termid":"MONDO:0010711","xrefs":{"Monarch":{"xref_id":"0010711"}}}


id: PBO:0077716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 2","termid":"PBO:0077716"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: MONDO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated scaphocephaly is a form of nonsyndromic craniosynostosis characterized by premature fusion of the sagittal suture.","definition_xrefs":["Orphanet:35093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated scaphocephaly (obsolete MONDO:0018112)","secondary_identifiers":["NANDO:2201302"],"synonyms":[{"name":"isolated dolichocephaly","type":"exact"},{"name":"non-syndromic sagittal synostosis","type":"exact"}],"termid":"MONDO:0018112","xrefs":{"Monarch":{"xref_id":"0018112"}}}


id: MONDO:0006279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive, poorly differentiated, non-small cell lung carcinoma characterized by the presence of a sarcomatoid component often associated with giant cell differentiation. There is a male to female ratio of 4:1. Clinical symptoms include cough, hemoptysis, chest pain, progressive dyspnea and fever secondary to recurrent pneumonia. Cigarette smoking is a major risk factor.","definition_xrefs":["NCIT:C45540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcomatoid carcinoma","secondary_identifiers":["ICD9:162.9","MEDGEN:353871","ONCOTREE:SARCL","EFO:1000336","SCTID:707460002","DOID:0080777","UMLS:C1708781"],"synonyms":[{"name":"lung sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0006279","xrefs":{"Monarch":{"xref_id":"0006279"}}}


id: GO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GTP dependent catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate.","definition_xrefs":["GOC:ecd","PMID:17200152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0004672","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"GTP-dependent protein kinase activity","termid":"GO:0034211"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: MONDO:0020074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare group of disorders characterized by the development of myoclonic and tonic-clonic epileptic seizures associated with progressive degeneration of the nervous system.","definition_xrefs":["NCIT:C7636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent-onset epilepsy syndrome (obsolete MONDO:0020073)","termid":"MONDO:0020073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"},{"relation_name":"is_a","term_name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","termid":"MONDO:0800495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonus epilepsy","secondary_identifiers":["NORD:1617","UMLS:C0751778","SCTID:267581004","NANDO:1200953","icd11.foundation:173613583","OMIMPS:254800","Orphanet:98261","DOID:891","GARD:7140","MEDGEN:199732","MESH:D020191","NANDO:2100237"],"synonyms":[{"name":"PME","type":"exact"},{"name":"epilepsy, progressive myoclonic","type":"exact"},{"name":"familial progressive myoclonic epilepsy","type":"related"},{"name":"progressive myoclonic epilepsy","type":"exact"},{"name":"progressive myoclonic epilepsy (disorder) [ambiguous]","type":"exact"},{"name":"progressive myoclonus epilepsy","type":"exact"}],"termid":"MONDO:0020074","xrefs":{"Monarch":{"xref_id":"0020074"}}}


id: MONDO:0030866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities","secondary_identifiers":["MEDGEN:1750805","OMIM:619121","UMLS:C5436848","DOID:0070543"],"synonyms":[{"name":"NEDCASB","type":"exact"}],"termid":"MONDO:0030866","xrefs":{"Monarch":{"xref_id":"0030866"}}}


id: PBO:0058500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692b","termid":"PBO:0058500"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: PBO:0027522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_cytokinesis_checkpoint_signaling","termid":"PBO:0027522"}


id: PBO:0086688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified in a screen for mutants with decreased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086688"}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: GO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.","definition_xrefs":["EC:3.2.1.55","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.55-RXN"],"synonyms":[{"name":"L-arabinosidase activity","type":"related"},{"name":"alpha-L-arabinanase activity","type":"related"},{"name":"alpha-L-arabinofuranoside arabinofuranohydrolase activity","type":"related"},{"name":"alpha-L-arabinofuranoside hydrolase activity","type":"related"},{"name":"alpha-L-arabinosidase activity","type":"related"},{"name":"alpha-N-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinofuranosidase activity","type":"related"},{"name":"alpha-arabinosidase activity","type":"related"},{"name":"arabinofuranosidase activity","type":"related"},{"name":"arabinosidase activity","type":"related"},{"name":"polysaccharide alpha-L-arabinofuranosidase activity","type":"exact"}],"termid":"GO:0046556"}


id: PBO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ucp12 (predicted)","termid":"PBO:0005364"}


id: PBO:0071942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 19","termid":"PBO:0071942"}


id: GO:0014823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to activity","synonyms":[{"name":"response to exercise","type":"related"}],"termid":"GO:0014823"}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: PBO:0071205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 46","termid":"PBO:0071205"}


id: PBO:0085117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA","termid":"PBO:0085117"}


id: MONDO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of torsion dystonia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"torsion dystonia","termid":"MONDO:0044843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"acquired torsion dystonia","secondary_identifiers":["MEDGEN:739598","SCTID:433493000","UMLS:C1719382"],"synonyms":[{"name":"acquired torsion dystonia","type":"exact"}],"termid":"MONDO:0044870","xrefs":{"Monarch":{"xref_id":"0044870"}}}


id: MONDO:0016836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.11 microdeletion syndrome is a recently described syndrome characterized by developmental delay, microcephaly, epilepsy, short stature, facial dysmorphism and behavioral problems.","definition_xrefs":["Orphanet:261236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p13.11 microdeletion syndrome","secondary_identifiers":["SCTID:719577000","UMLS:C4304596","GARD:20774","MEDGEN:930265","DECIPHER:79"],"synonyms":[{"name":"16p13.11 recurrent microdeletion (neurocognitive disorder susceptibility locus)","type":"exact"},{"name":"Del(16)(p13.11)","type":"exact"},{"name":"monosomy 16p13.11","type":"exact"}],"termid":"MONDO:0016836","xrefs":{"Monarch":{"xref_id":"0016836"}}}


id: SO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of an experimentally derived feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature_attribute","synonyms":[{"name":"experimental feature attribute","type":"related"}],"termid":"SO:0001684"}


id: GO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, alternative pathway in another organism (obsolete GO:0044643)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044643"}


id: PBO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3","termid":"PBO:0090495"}


id: PBO:0089057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1","termid":"PBO:0089057"}


id: GO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein particle oxidation, occurring in the blood plasma.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma lipoprotein oxidation","termid":"GO:0034444"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"plasma lipoprotein particle oxidation","termid":"GO:0034441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma lipoprotein oxidation","synonyms":[{"name":"inhibition of plasma lipoprotein oxidation","type":"narrow"},{"name":"negative regulation of plasma lipoprotein particle oxidation","type":"related"}],"termid":"GO:0034445"}


id: PBO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase like","termid":"PBO:0044310"}


id: MONDO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the orbital region.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete sensory system disease (obsolete MONDO:0005128)","termid":"MONDO:0005128"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of orbital region","secondary_identifiers":["UMLS:C5886742","MEDGEN:1863347","SCTID:371409005","DOID:1492","ICD9:362.10","ICD10CM:H00-H59"],"synonyms":[{"name":"disease of orbital region","type":"exact"},{"name":"disease or disorder of orbital region","type":"exact"},{"name":"disorder of eye region","type":"exact"},{"name":"disorder of orbital region","type":"exact"},{"name":"eye and adnexa disease","type":"related"},{"name":"ophthalmological disorder","type":"related"},{"name":"orbital region disease","type":"exact"},{"name":"orbital region disease or disorder","type":"exact"}],"termid":"MONDO:0002022","xrefs":{"Monarch":{"xref_id":"0002022"}}}


id: GO:0032228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"}


id: PBO:0109915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylosome subunit pICln, Saf5","termid":"PBO:0109915"}


id: SO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is maternally_imprinted.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"maternally_imprinted","termid":"SO:0000135"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted_gene","synonyms":[{"name":"maternally imprinted gene","type":"exact"}],"termid":"SO:0000888"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: PBO:0043298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 17A","termid":"PBO:0043298"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: GO:1901447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"positively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to propan-1-ol","synonyms":[{"name":"activation of response to propan-1-ol","type":"narrow"},{"name":"up regulation of response to propan-1-ol","type":"exact"},{"name":"up-regulation of response to propan-1-ol","type":"exact"},{"name":"upregulation of response to propan-1-ol","type":"exact"}],"termid":"GO:1901447"}


id: GO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + malate + CoA = ADP + phosphate + malyl-CoA.","definition_xrefs":["EC:6.2.1.9","MetaCyc:MALATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malate-CoA ligase activity","secondary_identifiers":["RHEA:26193"],"synonyms":[{"name":"malate thiokinase activity","type":"related"},{"name":"malate:CoA ligase (ADP-forming)","type":"related"},{"name":"malyl coenzyme A synthetase activity","type":"related"},{"name":"malyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050074"}


id: PBO:0026668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase_transition","termid":"PBO:0026668"}


id: PBO:0089038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1","termid":"PBO:0089038"}


id: MONDO:0021145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that involves the genitourinary system.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of genitourinary system (obsolete MONDO:0021145)","secondary_identifiers":["ICD10CM:N00-N99","SCTID:42030000"],"synonyms":[{"name":"disease of genitourinary system","type":"exact"},{"name":"disease or disorder of genitourinary system","type":"exact"},{"name":"disorder of genitourinary system","type":"exact"},{"name":"disorder of the genitourinary system","type":"exact"},{"name":"genitourinary system disease","type":"exact"},{"name":"genitourinary system disease or disorder","type":"exact"},{"name":"syndrome of the genitourinary system","type":"related"},{"name":"urogenital disease","type":"related"},{"name":"urogenital disorder","type":"related"}],"termid":"MONDO:0021145","xrefs":{"Monarch":{"xref_id":"0021145"}}}


id: PBO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine","termid":"PBO:0001020"}


id: PBO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 pseudogene 1","termid":"PBO:0042351"}


id: MONDO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that combines agammaglobulinemia with marked microcephaly, significant developmental delay, craniosynostosis, a severe dermatitis, cleft palate, narrowing of the choanae, and blepharophimosis. It has been described in three siblings, two males and one female, born to nonconsanguineous parents. Transmission is probably autosomal recessive. It has been suggested that this syndrome represents a new form of agammaglobulinemia due to a defect in early B-cell maturation.","definition_xrefs":["Orphanet:83617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia-microcephaly-craniosynostosis-severe dermatitis syndrome","secondary_identifiers":["GARD:10011","UMLS:C1864848","MESH:C538055","OMIM:610483","SCTID:722281001","MEDGEN:351236"],"synonyms":[{"name":"agammaglobulinemia, microcephaly, and severe dermatitis","type":"related"}],"termid":"MONDO:0012508","xrefs":{"Monarch":{"xref_id":"0012508"}}}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: MONDO:0007600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which the kidneys do not absorb certain substances into the body. These substances, such as cysteine, fructose, galactose, or glycogen, are lost in the urine. Fanconi syndrome is thought to be caused by genetic and environmental factors, and it may be diagnosed at any age. Symptoms of Fanconi syndrome include increased urine production (which may cause dehydration), weakness, and abnormalities of the bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary Fanconi syndrome","secondary_identifiers":["MEDGEN:341765","NCIT:C123229","GARD:9118","Orphanet:3337","UMLS:C1857395"],"synonyms":[{"name":"FRTS1","type":"narrow"},{"name":"Fanconi renotubular syndrome 1","type":"narrow"},{"name":"primary Fanconi renotubular syndrome","type":"narrow"}],"termid":"MONDO:0007600","xrefs":{"Monarch":{"xref_id":"0007600"}}}


id: PBO:0028544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_regulatory_region_sequence-specific_DNA_binding_during_cellular_response_to_phosphate_starvation","termid":"PBO:0028544"}


id: MONDO:0800275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 14a","secondary_identifiers":["UMLS:C3552491","MEDGEN:765405"],"synonyms":[{"name":"AUTS14A","type":"exact"}],"termid":"MONDO:0800275","xrefs":{"Monarch":{"xref_id":"0800275"}}}


id: PBO:0070313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 2","termid":"PBO:0070313"}


id: MONDO:0015725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 14 is a rare chromosomal disorder in which there are 3 copies (trisomy) of chromosome 14 in some cells of the body, while other cells have the usual two copies. The extent and severity of features in affected individuals can vary. Signs and symptoms that have been most commonly reported include intrauterine growth restriction ; failure to to thrive ; developmental delay; intellectual disability; distinctive facial characteristics; structural malformations of the heart; and other physical abnormalities. This condition is most often caused by an error in cell division in the egg or sperm cell before conception, or in fetal cells after fertilization. Treatment is directed toward the specific signs and symptoms in each individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 14 disorder","termid":"MONDO:0700021"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 14","secondary_identifiers":["GARD:1327","SCTID:764466009","UMLS:C2930917","MESH:C535489","MEDGEN:418947","Orphanet:1703","NCIT:C116319"],"synonyms":[{"name":"Mosaic trisomy chromosome 14","type":"related"},{"name":"Mosaic trisomy type 14","type":"exact"},{"name":"trisomy 14 mosaicism","type":"related"}],"termid":"MONDO:0015725","xrefs":{"Monarch":{"xref_id":"0015725"}}}


id: GO:0021871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process resulting in the creation of areas within the forebrain that will direct the behavior of cell migration in differentiation as the forebrain develops.","definition_xrefs":["PMID:16226447","GOC:dgh","GOC:isa_complete","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain regionalization","termid":"GO:0021871"}


id: MONDO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hereditary, primary immunodeficiency due to a complement cascade protein anomaly characterized by significantly increased susceptibility to Neisseria species infections. It only affects males, typically presenting with severe or fulminant meningococcal disease.","definition_xrefs":["Orphanet:2966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"properdin deficiency, X-linked","secondary_identifiers":["DOID:0111768","NANDO:2200789","OMIM:312060","GARD:4513","MESH:C537241","UMLS:C1839454","ICD9:279.8","SCTID:81166004","MEDGEN:333322"],"synonyms":[{"name":"CFPD","type":"related"},{"name":"PFD","type":"related"},{"name":"complement Factor properdin deficiency","type":"related"},{"name":"properdin P Factor deficiency","type":"related"},{"name":"properdin deficiency, X-linked","type":"exact"},{"name":"properdin deficiency, X-linked, X-linked recessive","type":"exact"},{"name":"properdin deficiency, type 1","type":"related"},{"name":"properdin deficiency, type 2","type":"related"},{"name":"properdin deficiency, type 3","type":"related"}],"termid":"MONDO:0010713","xrefs":{"Monarch":{"xref_id":"0010713"}}}


id: PBO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein","termid":"PBO:0001397"}


id: GO:0061621
data:
  {"annotated_genes":["SJAG_00605","SJAG_03828","SJAG_06622","SJAG_02945","SJAG_01310","SJAG_02107","SJAG_00027","SJAG_02369","SJAG_04495","SJAG_03373","SJAG_02009","SJAG_02135","SJAG_00461","SJAG_03660","SJAG_02796","SJAG_04192","SJAG_04334","SJAG_06621","SJAG_03903","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74194,79617,94013,97500,97771,102911,103169,104999,105000,105001,105370,105371,108961,108962,108963,108964,108965,108966,108967,115952],"is_not":false,"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The glycolytic process that begins with the conversion of glucose to glucose-6-phosphate by glucokinase activity. Glycolytic processes are the chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"canonical glycolysis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycolysis","Reactome:R-HSA-70171","MetaCyc:ANAGLYCOLYSIS-PWY"],"termid":"GO:0061621","terms_by_termid":{"GO:0061621":null}}


id: PBO:0017573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6 (predicted)","termid":"PBO:0017573"}


id: PBO:0027184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_F-actin_level_in_actomyosin_contractile_ring_during_anaphase_B","termid":"PBO:0027184"}


id: MONDO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 12","secondary_identifiers":["OMIM:620010","MEDGEN:1824084","UMLS:C5774311"],"synonyms":[{"name":"PFIC12","type":"exact"},{"name":"cholestasis, isolated low-ggt","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 12","type":"exact"}],"termid":"MONDO:0031040","xrefs":{"Monarch":{"xref_id":"0031040"}}}


id: PBO:0061662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 2","termid":"PBO:0061662"}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: GO:0032768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of monooxygenase activity (obsolete GO:0032768)","termid":"GO:0032768"}


id: MONDO:0021485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of iris","secondary_identifiers":["ICD9:224.0","MEDGEN:87560","NCIT:C4555","SCTID:189151003","icd11.foundation:549962833","UMLS:C0346374"],"synonyms":[{"name":"benign tumor of iris","type":"exact"},{"name":"benign tumor of the iris","type":"exact"},{"name":"benign tumour of iris","type":"exact"},{"name":"benign tumour of the iris","type":"exact"},{"name":"iris benign neoplasm","type":"exact"},{"name":"benign iris neoplasm","type":"exact"},{"name":"benign iris tumor","type":"exact"},{"name":"benign iris tumour","type":"exact"},{"name":"benign neoplasm of the iris","type":"exact"}],"termid":"MONDO:0021485","xrefs":{"Monarch":{"xref_id":"0021485"}}}


id: PBO:0017058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0017058"}


id: GO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell during an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"alpha-beta T cell development involved in immune response","type":"related"},{"name":"alpha-beta T cell differentiation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002293"}


id: GO:0099088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in axons.","definition_xrefs":["GOC:dos","PMID:26586091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"axonal transport of messenger ribonucleoprotein complex","synonyms":[{"name":"axonal transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0099088"}


id: PBO:0088297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase","termid":"PBO:0088297"}


id: GO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with urotensin II to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:15102493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"urotensin II receptor activity","termid":"GO:0001604"}


id: MONDO:0958260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare group of spinal cord lipoma characterized by the presence of extramedullary lipomatous mass located at any point along the spinal cord with or without a dural defect.","definition_xrefs":["Orphanet:645273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida occulta","termid":"MONDO:0000859"},{"relation_name":"is_a","term_name":"spinal cord lipoma","termid":"MONDO:0001790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"dysraphic spinal cord lipoma","secondary_identifiers":["UMLS:C5816731","MEDGEN:1853158"],"termid":"MONDO:0958260","xrefs":{"Monarch":{"xref_id":"0958260"}}}


id: FYPO:0001289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is lower than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["PomBase:mah","CHEBI:16247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased phospholipid level","synonyms":[{"name":"decreased cellular phospholipid level","type":"exact"},{"name":"decreased phospholipid accumulation","type":"related"},{"name":"decreased phospholipid level during mitotic cell cycle","type":"related"},{"name":"decreased phospholipid level during vegetative growth","type":"exact"},{"name":"reduced phospholipid level","type":"exact"}],"termid":"FYPO:0001289"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: SO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 3' end, that causes elongation of the resulting polypeptide sequence at the C terminus.","definition_xrefs":["PMID:32020195","PMID:14732127","PMID:31216041","PMID:15864293","PMID:27984720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_three_prime_extension","synonyms":[{"name":"CDS Extension 3 prime","type":"exact"},{"name":"CDS Extension three prime","type":"exact"},{"name":"elongated CDS three prime","type":"exact"},{"name":"elongated_CDS_three_prime","type":"exact"}],"termid":"SO:0002229"}


id: FYPO:0001292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"reduced CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"}],"termid":"FYPO:0001292"}


id: PBO:0029483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_curved_cells_(obsolete_FYPO:0002232)","termid":"PBO:0029483"}


id: MONDO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteopetrosis (obsolete MONDO:0001738)","termid":"MONDO:0001738","xrefs":{"Monarch":{"xref_id":"0001738"}}}


id: GO:0035462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the diencephalon with respect to the left and right halves.","definition_xrefs":["GOC:dgh","PMID:15084459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in diencephalon","termid":"GO:0035462"}


id: MONDO:1011250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber congenital amaurosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis, non-human animal","termid":"MONDO:1010329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leber congenital amaurosis, dog","secondary_identifiers":["OMIA:001222-9615"],"termid":"MONDO:1011250","xrefs":{"Monarch":{"xref_id":"1011250"}}}


id: SO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a fusion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"fusion","termid":"SO:0000806"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Fusion_gene"],"synonyms":[{"name":"fusion gene","type":"exact"}],"termid":"SO:0000287"}


id: MONDO:0003499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the skin with a prominent spindle cell component.","definition_xrefs":["NCIT:C4666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sarcomatoid squamous cell skin carcinoma","secondary_identifiers":["DOID:5536","MEDGEN:87611","UMLS:C0349656","SCTID:254653005","NCIT:C27084","SCTID:403900000"],"synonyms":[{"name":"spindle cell (sarcomatoid) squamous cell carcinoma","type":"related"},{"name":"spindle cell (sarcomatoid) squamous cell skin carcinoma","type":"exact"},{"name":"spindle cell squamous carcinoma of skin","type":"exact"},{"name":"spindle cell squamous carcinoma of the skin","type":"exact"},{"name":"spindle cell squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003499","xrefs":{"Monarch":{"xref_id":"0003499"}}}


id: PBO:0086609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086609"}


id: GO:0035108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.","definition_xrefs":["UBERON:0002101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb morphogenesis","synonyms":[{"name":"limb bud morphogenesis","type":"narrow"}],"termid":"GO:0035108"}


id: PBO:0113463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of  tail-anchored proteins proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113463"}


id: GO:0010470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastrulation","termid":"GO:0010470"}


id: PBO:0087763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 membrane-associated complex; involved in regulation of actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0087763"}


id: GO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 orexin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orexin receptor binding","termid":"GO:0042324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 orexin receptor binding","synonyms":[{"name":"OX1 orexin receptor binding","type":"exact"},{"name":"type 1 hypocretin receptor binding","type":"exact"},{"name":"type 1 hypocretin receptor ligand","type":"narrow"}],"termid":"GO:0031771"}


id: GO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CO + H2O + ferrocytochrome b-561 = CO2 + 2 H+ + 2 ferricytochrome b-561.","definition_xrefs":["GOC:curators","RHEA:48880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carbon-monoxide oxygenase activity","secondary_identifiers":["Wikipedia:Carbon-monoxide_dehydrogenase_(cytochrome_b-561)","GO:0018999","GO:0047767","EC:1.2.5.3","MetaCyc:RXN-21452","UM-BBD_reactionID:r0650"],"synonyms":[{"name":"carbon monoxide oxidase activity","type":"related"},{"name":"carbon monoxide oxygenase (cytochrome b-561) activity","type":"narrow"},{"name":"carbon monoxide oxygenase activity","type":"exact"},{"name":"carbon monoxide,water:cytochrome b-561 oxidoreductase activity","type":"related"},{"name":"carbon monoxide:methylene blue oxidoreductase activity","type":"narrow"},{"name":"carbon-monoxide dehydrogenase (cytochrome b-561)","type":"related"},{"name":"cytochrome b561","type":"narrow"}],"termid":"GO:0008805"}


id: RO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"RO:0002325"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: FYPO:0008353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UMP 5'-nucleotidase activity is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished UMP 5'-nucleotidase activity","termid":"FYPO:0008353"}


id: GO:0038117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 19 (CCL19) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 19 receptor activity","synonyms":[{"name":"CCL19 receptor activity","type":"related"}],"termid":"GO:0038117"}


id: PBO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin family protein Vps1","termid":"PBO:0001278"}


id: FYPO:0005071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"increased chromatin silencing","termid":"FYPO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing at centromere","synonyms":[{"name":"increased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"increased heterochromatin silencing at centromere","type":"related"}],"termid":"FYPO:0005071"}


id: PBO:0089745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp10","termid":"PBO:0089745"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: PR:O14208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bit2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.03c","synonyms":[{"name":"Spom972h-bit2","type":"exact"}],"termid":"PR:O14208"}


id: MONDO:0016903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 4q deletion is a chromosome abnormality that affects many different parts of the body. People with this condition are missing genetic material located on the long arm (q) of chromosome 4 in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the deletion and which genes are involved. Common features shared by many people with this deletion includedistinctive craniofacial features, skeletal abnormalities, heart defects, intellectual disability, developmental delay, and short stature. Most cases are not inherited, although affectedpeople can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 4","termid":"MONDO:0016869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 4","secondary_identifiers":["Orphanet:262029","icd11.foundation:855319857","MESH:C537639","MEDGEN:468967","UMLS:C0265404","GARD:1340"],"synonyms":[{"name":"4q deletion","type":"related"},{"name":"4q monosomy","type":"related"},{"name":"chromosome 4q deletion","type":"related"},{"name":"deletion 4q","type":"related"},{"name":"monosomy 4q","type":"related"},{"name":"partial deletion of chromosome 4q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 4","type":"exact"},{"name":"partial monosomy 4q","type":"related"},{"name":"partial monosomy of chromosome 4q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 4","type":"exact"}],"termid":"MONDO:0016903","xrefs":{"Monarch":{"xref_id":"0016903"}}}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: PBO:0080583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 6","termid":"PBO:0080583"}


id: GO:0043937
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169","SJAG_04853","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[101816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[91661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporulation, the process whose specific outcome is the progression of a spore over time, from its initiation to the mature structure.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sporulation","termid":"GO:0043934"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporulation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043937","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: MONDO:0002921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare genetic muscle disorders characterized by hypotonia, muscle weakness, and delayed development of motor skills.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital structural myopathy","secondary_identifiers":["UMLS:C0752282","DOID:422","MESH:D020914","MEDGEN:156050","NANDO:2200867","NCIT:C84648","NANDO:1200482"],"synonyms":[{"name":"centronuclear myopathy","type":"related"}],"termid":"MONDO:0002921","xrefs":{"Monarch":{"xref_id":"0002921"}}}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: GO:0033741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + glutathione disulfide + H+ + sulfite = 5'-adenylyl sulfate + 2 glutathione.","definition_xrefs":["EC:1.8.4.9","RHEA:14141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenylyl-sulfate reductase (glutathione) activity","secondary_identifiers":["MetaCyc:1.8.4.9-RXN","KEGG_REACTION:R05717"],"synonyms":[{"name":"5'-adenylylsulfate reductase activity","type":"related"},{"name":"AMP,sulfite:glutathione-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"AMP,sulfite:oxidized-glutathione oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"plant-type 5'-adenylylsulfate reductase activity","type":"narrow"}],"termid":"GO:0033741"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: MONDO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Ververi-Brady syndrome","secondary_identifiers":["OMIM:617982","GARD:18015","MEDGEN:1647785","Orphanet:580940","UMLS:C4693824"],"synonyms":[{"name":"VERBRAS","type":"related"},{"name":"Ververi-Brady syndrome","type":"exact"}],"termid":"MONDO:0060707","xrefs":{"Monarch":{"xref_id":"0060707"}}}


id: PBO:0080892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F2","termid":"PBO:0080892"}


id: PBO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036050"}


id: MONDO:0800134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in the CRACR2A gene.","definition_xrefs":["PMID:34908525","PMID:35151051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency due to calcium channel deficiency","termid":"MONDO:0800134","xrefs":{"Monarch":{"xref_id":"0800134"}}}


id: PR:O14159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sphingosine kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingoid long chain base kinase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.07c","secondary_identifiers":["UniProtKB:O14159"],"synonyms":[{"name":"LCB kinase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPHK1","type":"exact"},{"name":"sphinganine kinase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14159"}


id: PBO:0069207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 462, pseudogene","termid":"PBO:0069207"}


id: GO:0140303
data:
  {"annotated_genes":["SJAG_02516","SJAG_02132","SJAG_02897","SJAG_01470","SJAG_02114","SJAG_00669","SJAG_02943","SJAG_00589","SJAG_01945","SJAG_03076","SJAG_05209","SJAG_03100","SJAG_00587","SJAG_03050","SJAG_01095","SJAG_02581","SJAG_02957","SJAG_00018","SJAG_03774","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76516,74123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015247"},{"annotations":[90003,90007,90008,90002,90004,90005,90001,90006,90000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[112147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[93908,97436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[98986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[97438,93910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[93911,97439,99714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93912,97440,98988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[98989,112088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[112089,98990,93913,97441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[74992,100944,103122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Enables the transport of a lipid from a region of a membrane to a different region on the same membrane.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03076":null,"SJAG_03100":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flippase activity","type":"related"},{"name":"translocase activity","type":"broad"}],"termid":"GO:0140303","terms_by_termid":{"GO:0015247":null,"GO:0017128":null,"GO:0034202":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: PBO:0119785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec61 translocon gamma subunit Sss1","termid":"PBO:0119785"}


id: GO:1904723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Wnt-Frizzled-LRP5/6 complex assembly.","definition_xrefs":["GOC:PARL","GOC:bf","GO_REF:0000058","GOC:TermGenie","PMID:11433302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904711"},{"relation_name":"negatively_regulates","term_name":"Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"down regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"down regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"down regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"down regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"down regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"down regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"down regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"down regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"down regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"down regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"down-regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"down-regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"down-regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"down-regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"down-regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"down-regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"down-regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"down-regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"downregulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"downregulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"downregulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"downregulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"downregulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"downregulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"downregulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"downregulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"inhibition of Frizzled-LRP5/6 complex assembly","type":"narrow"},{"name":"inhibition of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"inhibition of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"inhibition of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"inhibition of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"narrow"},{"name":"inhibition of Wnt-FZD-LRP5/6 trimeric complex formation","type":"narrow"},{"name":"inhibition of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"inhibition of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"negative regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"negative regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"negative regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"negative regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"negative regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"negative regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"negative regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"negative regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904723"}


id: MONDO:0015845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervical aplasia and agenesis","secondary_identifiers":["Orphanet:180145","UMLS:C5190813","GARD:20186","icd11.foundation:1670353767","MEDGEN:1673872"],"termid":"MONDO:0015845","xrefs":{"Monarch":{"xref_id":"0015845"}}}


id: PBO:0031581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_on_glucose_carbon_source","termid":"PBO:0031581"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["MEDGEN:1824076","UMLS:C5774303","OMIM:620228"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: GO:0102250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydrogenphosphate + a linear malto-oligosaccharide = alpha-D-glucose 1-phosphate + a linear malto-oligosaccharide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linear malto-oligosaccharide phosphorylase activity (obsolete GO:0102250)","termid":"GO:0102250"}


id: PBO:0075907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA6 antisense RNA 1","termid":"PBO:0075907"}


id: PBO:0068967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 211, pseudogene","termid":"PBO:0068967"}


id: PR:Q9P768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A B(0,+)-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease P7G5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.06","secondary_identifiers":["UniProtKB:Q9P768"],"synonyms":[{"name":"Spom972h-SLC7A9","type":"exact"}],"termid":"PR:Q9P768"}


id: GO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete m-xylene biosynthetic process (obsolete GO:0046241)","synonyms":[{"name":"m-xylene anabolism","type":"exact"},{"name":"m-xylene biosynthesis","type":"exact"},{"name":"m-xylene biosynthetic process","type":"exact"},{"name":"m-xylene formation","type":"exact"},{"name":"m-xylene synthesis","type":"exact"},{"name":"meta-xylene biosynthesis","type":"exact"},{"name":"meta-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046241"}


id: PBO:0114073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4","termid":"PBO:0114073"}


id: PBO:0062840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 6","termid":"PBO:0062840"}


id: GO:0052179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving pectin in the cell wall of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host cell wall pectin (obsolete GO:0052179)","synonyms":[{"name":"metabolism by organism of cell wall pectin in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052179"}


id: GO:0023047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a chemical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by chemical mediator (obsolete GO:0023047)","synonyms":[{"name":"signal initiation by chemical mediator","type":"exact"}],"termid":"GO:0023047"}


id: PBO:0014265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD24","termid":"PBO:0014265"}


id: GO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a seed oilbody. Seed oilbodies are simple organelles comprising a matrix of triglyceride surrounded by a phospholipid monolayer embedded and covered with unique proteins called oleosins. Seed oilbodies supply the energy requirements for the growth of the seedling after germination.","definition_xrefs":["PMID:16877495","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"seed oilbody biogenesis","synonyms":[{"name":"oleosome biogenesis","type":"related"},{"name":"seed oil body organization","type":"exact"},{"name":"spherosome biogenesis","type":"related"}],"termid":"GO:0010344"}


id: GO:0033105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure, composed of a monolayer of glycolipids with embedded proteins, that encloses the pigments and other contents of the chlorosome.","definition_xrefs":["PMID:17303128","PMID:14729689","PMID:14507718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"chlorosome","termid":"GO:0046858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlorosome envelope","synonyms":[{"name":"chlorosome membrane","type":"exact"}],"termid":"GO:0033105"}


id: FYECO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nickel ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Ni ions","synonyms":[{"name":"nickel ions added","type":"exact"}],"termid":"FYECO:0000198"}


id: MONDO:0100408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(16;21)(q24;q22). (A cytogenetic abnormality that refers to the translocation of the long arm (q24) of chromosome 16 and the long arm (q22) of chromosome 22. It is associated with RUNX1/CBFA2T3 fusions, myelodysplastic syndromes and acute myeloid leukemia.)","definition_xrefs":["NCIT:C168773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(16;21)(q24;q22)","synonyms":[{"name":"AML, t(16;21)(q24;q22)","type":"exact"}],"termid":"MONDO:0100408","xrefs":{"Monarch":{"xref_id":"0100408"}}}


id: GO:0016153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-imidazolone-5-propanoate + H+ = trans-urocanate + H2O.","definition_xrefs":["EC:4.2.1.49","RHEA:13101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"urocanate hydratase activity","secondary_identifiers":["KEGG_REACTION:R02914","Reactome:R-HSA-70903","MetaCyc:UROCANATE-HYDRATASE-RXN"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming)","type":"related"},{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase activity","type":"related"},{"name":"imidazolonepropionate hydrolase activity","type":"related"},{"name":"urocanase activity","type":"related"}],"termid":"GO:0016153"}


id: PBO:0028146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus","termid":"PBO:0028146"}


id: PBO:0066288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member N, pseudogene","termid":"PBO:0066288"}


id: PBO:0072945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26A","termid":"PBO:0072945"}


id: MONDO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease, multisystem, infantile-onset in which the cause of the disease is a mutation in the ZAP70 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset, 2","secondary_identifiers":["MEDGEN:934735","OMIM:617006","UMLS:C4310768"],"synonyms":[{"name":"ADMIO2","type":"exact"},{"name":"ZAP70 autoimmune disease, multisystem, infantile-onset","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset caused by mutation in ZAP70","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2; ADMIO2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, type 2","type":"exact"}],"termid":"MONDO:0014861","xrefs":{"Monarch":{"xref_id":"0014861"}}}


id: GO:0051239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multicellular organismal process","termid":"GO:0051239"}


id: GO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045826)","synonyms":[{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045826"}


id: GO:2000555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"negative regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000555"}


id: GO:0140313
data:
  {"annotated_genes":["SJAG_01993","SJAG_02857","SJAG_04873","SJAG_00822","SJAG_01078","SJAG_00436","SJAG_04682","SJAG_02474","SJAG_00642","SJAG_02266","SJAG_02576","SJAG_00145","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003788"},{"annotations":[111301,94658,94721,100008,100060,104547,89678,87085,106973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140311"},{"annotations":[104469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140610"},{"annotations":[93250,93251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a specific molecule to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04682":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203553","Reactome:R-HSA-203680","Reactome:R-HSA-3245898"],"termid":"GO:0140313","terms_by_termid":{"GO:0003788":null,"GO:0140311":null,"GO:0140486":null,"GO:0140610":null}}


id: FYPO:0003933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is decreased.","definition_xrefs":["PomBase:mah","GO:0034428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"decreased 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"decreased nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"},{"name":"reduced nuclear 5'-3' exonucleolytic mRNA catabolic process","type":"exact"}],"termid":"FYPO:0003933"}


id: GO:0102203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + brassicasterol = UDP(3-) + 3-O-beta-D-glucosyl-brassicasterol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete brassicasterol glucosyltransferase activity (obsolete GO:0102203)","termid":"GO:0102203"}


id: MONDO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, inflammatory skin disorder that affects the scalp, central face and skin folds; it is characterized by scaling and itching.","definition_xrefs":["NCIT:C111888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"seborrheic dermatitis","secondary_identifiers":["MESH:D012628","ICD9:706.3","ICD9:690.10","DOID:8741","ICD9:690.1","EFO:1000764","HP:0001051","MEDGEN:19912","UMLS:C0036508"],"synonyms":[{"name":"Seborrhoeic dermatitis","type":"exact"},{"name":"Seborrhoeic eczema","type":"exact"},{"name":"cradle Cap","type":"exact"},{"name":"seborrhea","type":"exact"},{"name":"seborrheic dermatitis","type":"exact"},{"name":"seborrheic dermatitis (disease)","type":"exact"},{"name":"seborrheic eczema","type":"exact"},{"name":"skin seborrheic","type":"exact"}],"termid":"MONDO:0006608","xrefs":{"Monarch":{"xref_id":"0006608"}}}


id: FYPO:0002367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002367"}


id: PBO:0045355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate N-acetylglucosaminephosphotransferase 1","termid":"PBO:0045355"}


id: MONDO:0015074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the thyroid gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid tumor","secondary_identifiers":["ICD9:239.7","EFO:0003841","GARD:19762","NCIT:C3414","SCTID:127018007","UMLS:C0040136","ONCOTREE:THYROID","MONDO:0021217","Orphanet:100087","MEDGEN:21546"],"synonyms":[{"name":"THYROID","type":"related"},{"name":"neoplasm of the thyroid","type":"exact"},{"name":"neoplasm of the thyroid gland","type":"exact"},{"name":"neoplasm of thyroid","type":"exact"},{"name":"neoplasm of thyroid gland","type":"exact"},{"name":"thyroid gland neoplasm","type":"exact"},{"name":"thyroid gland neoplasm (disease)","type":"exact"},{"name":"thyroid gland tumor","type":"exact"},{"name":"thyroid gland tumour","type":"exact"},{"name":"thyroid neoplasm","type":"exact"},{"name":"thyroid neoplasms","type":"exact"},{"name":"thyroid tumor","type":"exact"},{"name":"tumor of the thyroid","type":"exact"},{"name":"tumor of the thyroid gland","type":"exact"},{"name":"tumor of thyroid","type":"exact"},{"name":"tumor of thyroid gland","type":"exact"},{"name":"tumour of the thyroid","type":"exact"},{"name":"tumour of the thyroid gland","type":"exact"},{"name":"tumour of thyroid","type":"exact"},{"name":"tumour of thyroid gland","type":"exact"}],"termid":"MONDO:0015074","xrefs":{"Monarch":{"xref_id":"0015074"}}}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: PBO:0061482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG1 intronic transcript 3","termid":"PBO:0061482"}


id: PBO:0082140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Cbk1p kinase; component of the RAM signaling network that regulates cellular polarity and morphogenesis; activation of Cbk1p facilitates the Ace2p-dependent daughter cell-specific transcription of genes involved in cell separation; similar to Mob1p","termid":"PBO:0082140"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: PBO:0079611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H pseudogene 1","termid":"PBO:0079611"}


id: PBO:0113137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-6-phosphate dehydrogenase (G6PD); catalyzes the first step of the pentose phosphate pathway; involved in adaptation to oxidative stress; negative regulator of nonselective autophagy, independent of Stb5p; protein abundance increases in response to DNA replication stress; homolog of human G6PD which is deficient in patients with hemolytic anemia; human G6PD can complement yeast zwf1 null mutant","termid":"PBO:0113137"}


id: PR:Q9US14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg82 gene.","definition_xrefs":["UniProtKB:Q9US14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized inositol polyphosphate kinase C607.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.04","synonyms":[{"name":"Spom972h-arg82","type":"exact"}],"termid":"PR:Q9US14"}


id: MOD:01232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(12)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:12175151","PubMed:11999733","PubMed:11857757","Unimod:58#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"3x(12)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:01232"}


id: PR:P55877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif11 gene.","definition_xrefs":["UniProtKB:P55877","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.07","synonyms":[{"name":"Spom972h-tif11","type":"exact"},{"name":"eIF-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 4C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P55877"}


id: PBO:0041140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 divergent transcript","termid":"PBO:0041140"}


id: FYPO:0006831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis begins later than normal.","definition_xrefs":["PomBase:mah","GO:0031671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of primary cell septum biogenesis","synonyms":[{"name":"delayed onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"delayed onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"delayed onset of primary cell septum formation","type":"exact"},{"name":"delayed onset of primary septum biogenesis","type":"exact"},{"name":"delayed onset of primary septum synthesis","type":"related"},{"name":"delayed primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006831"}


id: GO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol.","definition_xrefs":["RHEA:15281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cholestenol delta-isomerase activity","secondary_identifiers":["MetaCyc:RXN66-25","EC:5.3.3.5"],"synonyms":[{"name":"cholestenol D-isomerase activity","type":"exact"},{"name":"delta7-cholestenol delta7-delta8-isomerase activity","type":"related"}],"termid":"GO:0047750"}


id: FYPO:0005386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin along chromosome arms is decreased.","definition_xrefs":["PomBase:mah","PMID:16682348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at chromosome arms","synonyms":[{"name":"decreased protein localisation to chromatin at chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin along chromosome arms","type":"exact"},{"name":"decreased protein localization to chromatin at chromosome arms during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome arms during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at chromosome arms","type":"exact"}],"termid":"FYPO:0005386"}


id: MONDO:0019969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Panner's disease is an osteochondrosis of the capitellum of the humerus, characterized by involvement of the dominant upper limb and onset before the age of 10 years. It results from lateral compression injuries of the elbow typically occurring in children practicing sports such as baseball and throw. It should be distinguished from osteochondritis dissecans of the capitellum, occurring later, in adolescents. Management is symptomatic and consists in reducing the activities of the affected elbow for a prolonged period of time. Prognosis is good.","definition_xrefs":["Orphanet:97336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panner disease","secondary_identifiers":["GARD:19365","MEDGEN:1673235","UMLS:C4759831"],"synonyms":[{"name":"Osteochondrosis of the capital humerus","type":"exact"},{"name":"aseptic necrosis of the capital humerus","type":"exact"}],"termid":"MONDO:0019969","xrefs":{"Monarch":{"xref_id":"0019969"}}}


id: PBO:0026821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin-specific_protease_activity","termid":"PBO:0026821"}


id: GO:0046049
data:
  {"annotated_genes":["SJAG_04713","SJAG_03708","SJAG_04354","SJAG_00694","SJAG_04709","SJAG_00197","SJAG_00964","SJAG_00444","SJAG_00533","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57241,59783,61647,59408,62652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[91447,87906,69602,86908,92446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UMP, uridine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UMP metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"UMP metabolism","type":"exact"}],"termid":"GO:0046049","terms_by_termid":{"GO:0044205":null,"GO:0044206":null}}


id: PATO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001112 energy value (obsolete PATO:0001112)","termid":"PATO:0001112"}


id: PR:O13849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpy1 gene.","definition_xrefs":["UniProtKB:O13849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Y (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.10c","synonyms":[{"name":"CPY (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpy1","type":"exact"}],"termid":"PR:O13849"}


id: MONDO:1011455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, non-human animal","secondary_identifiers":["OMIA:001465"],"termid":"MONDO:1011455","xrefs":{"Monarch":{"xref_id":"1011455"}}}


id: GO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of an axon near a node of Ranvier that is between the paranode and internode regions.","definition_xrefs":["GOC:jl","GOC:BHF","PMID:14682359","PMID:10624965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"juxtaparanode region of axon","secondary_identifiers":["NIF_Subcellular:sao758620702"],"synonyms":[{"name":"juxta paranode axon","type":"related"},{"name":"juxtaparanodal region","type":"exact"},{"name":"juxtaparanode","type":"exact"}],"termid":"GO:0044224"}


id: PBO:0075415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermadhesin family member","termid":"PBO:0075415"}


id: PBO:0088513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lis1 homology and WD repeat protein","termid":"PBO:0088513"}


id: GO:0007430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of terminal branches in the open tracheal system. These are long cytoplasmic extensions that form fine tubules that transport oxygen directly to the tissues. An example of the process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal branching, open tracheal system","synonyms":[{"name":"terminal branching of trachea, cytoplasmic projection extension","type":"exact"}],"termid":"GO:0007430"}


id: MOD:01950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-isoglutamyl histamine.","definition_xrefs":["RESID:AA0596","PubMed:23022564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl histamine","synonyms":[{"name":"(2S)-2-amino-5-([2-(1H-imidazol-5-yl)ethyl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"(gamma-glutamyl)histamine","type":"exact"},{"name":"L-isoglutamyl histamine","type":"exact"}],"termid":"MOD:01950"}


id: GO:1905035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an antifungal innate immune response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22470487","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of antifungal innate immune response","termid":"GO:1905034"},{"relation_name":"negatively_regulates","term_name":"antifungal innate immune response","termid":"GO:0061760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal innate immune response","synonyms":[{"name":"down regulation of antifungal innate immune response","type":"exact"},{"name":"down-regulation of antifungal innate immune response","type":"exact"},{"name":"downregulation of antifungal innate immune response","type":"exact"},{"name":"inhibition of antifungal innate immune response","type":"narrow"}],"termid":"GO:1905035"}


id: PBO:0034534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_at_centromere","termid":"PBO:0034534"}


id: MONDO:0019501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic diseae characterized by the association of sensorineural deafness (usually congenital) with retinitis pigmentosa and progressive vision loss.","definition_xrefs":["Orphanet:886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome","secondary_identifiers":["ICD10CM:H35.5","GARD:7843","MedDRA:10063396","NCIT:C85217","icd11.foundation:1452641873","DOID:0050439","UMLS:C0271097","MESH:D052245","OMIMPS:276900","NORD:1816","MEDGEN:78754","NANDO:1200941"],"synonyms":[{"name":"Graefe-Usher syndrome","type":"related"},{"name":"Hallgren syndrome","type":"related"},{"name":"USH","type":"exact"},{"name":"Usher's syndrome","type":"exact"},{"name":"deafness-retinitis pigmentosa syndrome","type":"narrow"},{"name":"dystrophia retinae pigmentosa-dysostosis syndrome","type":"related"},{"name":"retinitis pigmentosa-deafness syndrome","type":"narrow"},{"name":"ush","type":"exact"}],"termid":"MONDO:0019501","xrefs":{"Monarch":{"xref_id":"0019501"}}}


id: GO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric distal tubule identity","termid":"GO:0072295"}


id: MONDO:0033006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 2, X-linked","secondary_identifiers":["GARD:15281","OMIM:301006","DOID:0080244","MEDGEN:1625619","UMLS:C4538784"],"synonyms":[{"name":"GAMOS2","type":"related"},{"name":"Galloway-Mowat syndrome 2","type":"related"},{"name":"Galloway-Mowat syndrome 2, X-linked","type":"exact"},{"name":"Galloway-Mowat syndrome 2, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0033006","xrefs":{"Monarch":{"xref_id":"0033006"}}}


id: GO:1904115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasm that is part of a axon.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:18667152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axon cytoplasm","synonyms":[{"name":"axoplasm","type":"exact"}],"termid":"GO:1904115"}


id: MONDO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002733 (obsolete MONDO:0002733)","termid":"MONDO:0002733","xrefs":{"Monarch":{"xref_id":"0002733"}}}


id: GO:0102235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-penten-3-one + NADPH + H+ = 1-pentan-3-one + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1-penten-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12295"],"termid":"GO:0102235"}


id: GO:1902629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mRNA stability that is involved in cellular response to UV.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:10954610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"part_of","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability involved in cellular response to UV","synonyms":[{"name":"regulation of mRNA stability involved in cellular response to UV light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to UV radiation stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet light stimulus","type":"exact"},{"name":"regulation of mRNA stability involved in cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:1902629"}


id: GO:0017126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolus organization","termid":"GO:0007000"},{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nucleologenesis","synonyms":[{"name":"nucleolus assembly","type":"narrow"},{"name":"nucleolus biogenesis","type":"exact"}],"termid":"GO:0017126"}


id: MONDO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated sternocostoclavicular hyperostosis is a rare rheumatologic disease characterized by predominantly bilateral, chronic, sterile inflammation and progressive sclerosis and hyperostosis of the sternocostoclavicular joint, with adjacent soft tissue ossification, in the absence of other joint involvement. It presents as recurrent episodes of pain, edema and/or erythema of the sternoclavicular region. Palmoplantar pustulosis may be additionally observed in some cases.","definition_xrefs":["Orphanet:178311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated sternocostoclavicular hyperostosis","secondary_identifiers":["MEDGEN:1640582","SCTID:766711009","GARD:20144","UMLS:C4707796"],"synonyms":[{"name":"isolated SCCH","type":"exact"}],"termid":"MONDO:0044355","xrefs":{"Monarch":{"xref_id":"0044355"}}}


id: GO:0004773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-hydroxyandrost-5-en-17-one 3-sulfate + H2O = 3-beta-hydroxyandrost-5-en-17-one + sulfate.","definition_xrefs":["EC:3.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"steryl-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-1606839","RHEA:19873","MetaCyc:STERYL-SULFATASE-RXN"],"synonyms":[{"name":"3-beta-hydroxysteroid sulfate sulfatase activity","type":"related"},{"name":"arylsulfatase C activity","type":"related"},{"name":"dehydroepiandrosterone sulfatase activity","type":"related"},{"name":"dehydroepiandrosterone sulfate sulfatase activity","type":"related"},{"name":"phenolic steroid sulfatase activity","type":"related"},{"name":"pregnenolone sulfatase activity","type":"related"},{"name":"steroid 3-sulfatase activity","type":"related"},{"name":"steroid sulfatase activity","type":"related"},{"name":"steroid sulfate sulfohydrolase activity","type":"related"},{"name":"sterol sulfatase activity","type":"related"},{"name":"steryl-sulfate sulfohydrolase activity","type":"related"},{"name":"steryl-sulphatase activity","type":"exact"}],"termid":"GO:0004773"}


id: PBO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2B (calcineurin A) catalytic subunit Ppb1","termid":"PBO:0090251"}


id: GO:0034024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + putrescine = gamma-L-glutamylputrescine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:13633","EC:6.3.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"glutamate-putrescine ligase activity","secondary_identifiers":["MetaCyc:RXN0-3901","KEGG_REACTION:R07414"],"synonyms":[{"name":"L-glutamate:putrescine ligase (ADP-forming) activity","type":"related"},{"name":"YcjK","type":"related"},{"name":"gamma-glutamylputrescine synthetase activity","type":"related"}],"termid":"GO:0034024"}


id: PBO:0066211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 4","termid":"PBO:0066211"}


id: MONDO:0012767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the CST3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 11","secondary_identifiers":["MESH:C567450","UMLS:C2677774","OMIM:611953","DOID:0110023","MEDGEN:393833"],"synonyms":[{"name":"ARMD11","type":"exact"},{"name":"CST3 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 11","type":"exact"},{"name":"age-related macular degeneration caused by mutation in CST3","type":"exact"},{"name":"macular Degeneration, age-related, type 11","type":"exact"},{"name":"macular degeneration, age-related, 11","type":"related"}],"termid":"MONDO:0012767","xrefs":{"Monarch":{"xref_id":"0012767"}}}


id: PBO:0055905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 28","termid":"PBO:0055905"}


id: MONDO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes which feature dyskinesias as a cardinal manifestation of the disease process. Included in this category are degenerative, hereditary, post-infectious, medication-induced, post-inflammatory, and post-traumatic conditions.","definition_xrefs":["MESH:D009069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual-facial-buccal dyskinesia","secondary_identifiers":["MEDGEN:57747","ICD9:333.82","DOID:9854","UMLS:C0152115","SCTID:49386006"],"synonyms":[{"name":"oro-facial dyskinesia","type":"exact"}],"termid":"MONDO:0004901","xrefs":{"Monarch":{"xref_id":"0004901"}}}


id: PBO:0016951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug129","termid":"PBO:0016951"}


id: GO:0030912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a deep water stimulus, being immersed in standing deep water throughout the life cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to deep water","termid":"GO:0030912"}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["PMID:15556404","PMID:17525341","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: GO:0034148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"negative regulation of TLR5 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034148"}


id: GO:2000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"negatively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of glucose","synonyms":[{"name":"negative regulation of glucose detection","type":"exact"},{"name":"negative regulation of glucose perception","type":"related"},{"name":"negative regulation of glucose sensing","type":"related"}],"termid":"GO:2000971"}


id: PR:Q10213
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase srs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.05","synonyms":[{"name":"Spom972h-srs2","type":"exact"}],"termid":"PR:Q10213"}


id: MOD:00649
data:
  {"annotated_genes":["SJAG_02522","SJAG_00733","SJAG_00464","SJAG_03641"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82279,82557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[82372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[82285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_00733":null,"SJAG_02522":null,"SJAG_03641":null},"genotype_count":0,"is_obsolete":false,"name":"acylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"AcylRes","type":"exact"}],"termid":"MOD:00649","terms_by_termid":{"MOD:00050":null,"MOD:00126":null,"MOD:00127":null}}


id: PR:O13900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap114 gene.","definition_xrefs":["UniProtKB:O13900","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap114 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.09c","synonyms":[{"name":"Spom972h-sap114","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13900"}


id: CHEBI:15741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acid","termid":"CHEBI:15741"}


id: GO:0007032
data:
  {"annotated_genes":["SJAG_01571","SJAG_01448","SJAG_01772","SJAG_03005","SJAG_04966","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76885,78287,81589,81851,102189],"is_not":false,"summary":null,"term":"GO:0007032"},{"annotations":[76105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_01571":null,"SJAG_01772":null,"SJAG_02100":null,"SJAG_03005":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome organisation","type":"exact"},{"name":"endosome organization and biogenesis","type":"related"}],"termid":"GO:0007032","terms_by_termid":{"GO:0007032":null,"GO:0034496":null}}


id: GO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane catabolic process","synonyms":[{"name":"alkane breakdown","type":"exact"},{"name":"alkane catabolism","type":"exact"},{"name":"alkane degradation","type":"exact"}],"termid":"GO:0043448"}


id: GO:0032981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0007005"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I assembly","secondary_identifiers":["Reactome:R-HSA-6799198"],"synonyms":[{"name":"mitochondrial NADH dehydrogenase complex (ubiquinone) assembly","type":"exact"},{"name":"mitochondrial complex I assembly","type":"exact"}],"termid":"GO:0032981"}


id: PBO:0074304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX4 structure-specific endonuclease subunit","termid":"PBO:0074304"}


id: PBO:0004343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Q","termid":"PBO:0004343"}


id: PBO:0075899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7 like","termid":"PBO:0075899"}


id: PBO:0075986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 antisense RNA 1","termid":"PBO:0075986"}


id: PBO:0087365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; meiotic septin expressed at high levels during meiotic divisions and ascospore formation; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087365"}


id: PBO:0049902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 3","termid":"PBO:0049902"}


id: FYPO:0006704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sedoheptulose-7-phosphate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular sedoheptulose-7-phosphate level","synonyms":[{"name":"decreased cellular sedoheptulose-7-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular sedoheptulose-7-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular sedoheptulose-7-phosphate level","type":"exact"}],"termid":"FYPO:0006704"}


id: PBO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBR1 autophagy cargo receptor","termid":"PBO:0060588"}


id: FYPO:0004902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, has more than one septum and more than one nucleus, and is curved along the long axis.","definition_xrefs":["PomBase:mah","PMID:25530312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000032"],"is_obsolete":false,"name":"curved, elongated, multinucleate multiseptate vegetative cell","synonyms":[{"name":"curved, elongated, multinucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"curved, elongated, multinucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"curved, long, multinucleate multiseptate cell","type":"exact"}],"termid":"FYPO:0004902"}


id: RO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps the sequence of x if and only if x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps_sequence_of","termid":"RO:0002526"}


id: MONDO:0014682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyroid cancer, nonmedullary in which the cause of the disease is a mutation in the HABP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"},{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 5","secondary_identifiers":["UMLS:C4225292","MEDGEN:895900","OMIM:616535","GARD:16133"],"synonyms":[{"name":"HABP2 thyroid cancer, nonmedullary","type":"exact"},{"name":"NMTC5","type":"related"},{"name":"thyroid cancer, nonmedullary caused by mutation in HABP2","type":"exact"},{"name":"thyroid cancer, nonmedullary, 5","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 5","type":"exact"}],"termid":"MONDO:0014682","xrefs":{"Monarch":{"xref_id":"0014682"}}}


id: PBO:0069711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 991, pseudogene","termid":"PBO:0069711"}


id: GO:0046397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galacturonate catabolic process","secondary_identifiers":["GO:0019587"],"synonyms":[{"name":"galacturonate breakdown","type":"exact"},{"name":"galacturonate catabolism","type":"exact"},{"name":"galacturonate degradation","type":"exact"}],"termid":"GO:0046397"}


id: PBO:0077445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178B","termid":"PBO:0077445"}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: GO:0180013
data:
  {"annotated_genes":["SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98986],"is_not":false,"summary":null,"term":"GO:0180013"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of a lysophosphatidylserine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:34645814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidylserine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180013","terms_by_termid":{"GO:0180013":null}}


id: GO:0034504
data:
  {"annotated_genes":["SJAG_03470","SJAG_03593","SJAG_03729","SJAG_01083","SJAG_02425","SJAG_00375","SJAG_04366","SJAG_01584","SJAG_02274","SJAG_03986","SJAG_03662","SJAG_00586","SJAG_00840","SJAG_02210","SJAG_01185","SJAG_01084","SJAG_04411","SJAG_01621","SJAG_01374","SJAG_00093","SJAG_01311","SJAG_04148","SJAG_00065","SJAG_03693","SJAG_01655","SJAG_00471","SJAG_03299","SJAG_01065","SJAG_03048","SJAG_03907","SJAG_03453","SJAG_02592","SJAG_01328","SJAG_03959","SJAG_01449","SJAG_00968","SJAG_01789","SJAG_01909","SJAG_02520","SJAG_01013","SJAG_03002","SJAG_02998","SJAG_03300","SJAG_02757","SJAG_04645","SJAG_00383","SJAG_01834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105358],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[114069],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1900181"},{"annotations":[100674,75424,76751,74943,77838,78723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[101912,90315,93852],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[88370,73062,75986,71759,79693,75768,105888,81869,78097,75514,104606,74618,82205,75487,76905,73274,67483,77444,77355,81466,95621,97335,74371,72756,76226,74559,60806,73332,81981,80273,93465,72157,74771,77451,115404,93763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[78721,76902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein transports or maintains the localization of another protein to the nucleus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00065":null,"SJAG_00093":null,"SJAG_00375":null,"SJAG_00383":null,"SJAG_00471":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01084":null,"SJAG_01185":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01584":null,"SJAG_01621":null,"SJAG_01655":null,"SJAG_01789":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02592":null,"SJAG_02757":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03048":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04366":null,"SJAG_04411":null,"SJAG_04645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044744"],"synonyms":[{"name":"protein localisation to nucleus","type":"exact"},{"name":"protein localization in cell nucleus","type":"exact"},{"name":"protein localization in nucleus","type":"exact"},{"name":"protein targeting to nucleus","type":"related"}],"termid":"GO:0034504","terms_by_termid":{"GO:0006606":null,"GO:0006607":null,"GO:0036228":null,"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: PR:Q9P7I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.19c","synonyms":[{"name":"Spom972h-nts1","type":"exact"}],"termid":"PR:Q9P7I7"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: PBO:0091219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm2","termid":"PBO:0091219"}


id: PBO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A4","termid":"PBO:0046419"}


id: PBO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 antisense RNA 1","termid":"PBO:0048401"}


id: PBO:0080087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 48","termid":"PBO:0080087"}


id: PATO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteromedial to","termid":"PATO:0002449"}


id: GO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on the paternal X-chromosome in the XX sex by genomic imprinting.","definition_xrefs":["PMID:18425126","PMID:23578369","GOC:tb","PMID:11743158","GOC:dph","GOC:sdb_2009","PMID:16789828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"},{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"inactivation of paternal X chromosome by genomic imprinting","synonyms":[{"name":"iXCI","type":"related"},{"name":"inactivation of paternal X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060818"}


id: PBO:0017542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase assembly protein (predicted)","termid":"PBO:0017542"}


id: GO:0052141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near host (obsolete GO:0052141)","termid":"GO:0052141"}


id: PBO:0076406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 4","termid":"PBO:0076406"}


id: PBO:0028674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_plasma_membrane_to_vacuole_transport_after_nitrogen_starvation","termid":"PBO:0028674"}


id: PBO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 38","termid":"PBO:0050128"}


id: PR:O13764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisome assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23077:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ATPase pex6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.01","secondary_identifiers":["UniProtKB:O13764"],"synonyms":[{"name":"SPAC17A5.01","type":"related"},{"name":"Spom972h-PEX6","type":"exact"},{"name":"peroxin-6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peroxisome biosynthesis protein pex6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13764"}


id: PBO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQB1 antisense RNA 1","termid":"PBO:0050029"}


id: GO:0015425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["EC:7.4.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled nonpolar-amino acid transporter activity","secondary_identifiers":["MetaCyc:3.6.3.22-RXN","TC:3.A.1.4.1"],"synonyms":[{"name":"ATP-dependent nonpolar-amino acid transporter activity","type":"exact"},{"name":"leucine/isoleucine/valine porter activity","type":"related"},{"name":"nonpolar amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino acid ABC transporter","type":"exact"},{"name":"nonpolar-amino acid-transporting ATPase activity","type":"exact"},{"name":"nonpolar-amino-acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015425"}


id: MONDO:0009436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothalamic hamartomas (HH) are rare, tumor-like malformations that occur during fetal development and are present at birth. The lesions usually do not change in size or spread to other locations. Both the type and severity of symptoms vary greatly among patients with hypothalamic hamartomas. Common symptoms include frequent gelastic seizures (spontaneous laughing, giggling and/or smirking) or dacrystic seizures (crying or grunting); developmental delays; and/or precocious puberty. Additional symptoms may include cognitive impairment; emotional and behavioral difficulties; and endocrine disturbances. These symptoms often start early in life but are frequently misdiagnosed. For some patients, endocrine (hormonal) disturbances such as central precocious puberty may be the only symptom. These patients can often be treated successfully with medications. For some, however, HH can be disabling. For those with HH and epilepsy, it is common for the disorder to progress and for different types of seizures to develop. The seizures associated with HH often cannot be well-controlled with the standard seizure medications. For some, additional treatment such as surgical removal, radiosurgery, or thermoablation may be indicated. Though hypothalamic hamartomas can occur in patients with certain genetic disorders (such as Pallister-Hall syndrome), the majority of cases are sporadic.","direct_ancestors":[{"relation_name":"is_a","term_name":"Pallister-Hall syndrome","termid":"MONDO:0007804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothalamic hamartoma syndrome","secondary_identifiers":["NCIT:C4385","UMLS:C0342418","MESH:C537158","ICD9:759.6","Orphanet:2113","GARD:2934","icd11.foundation:2057991470","MEDGEN:137970","OMIM:241800","SCTID:237714006"],"synonyms":[{"name":"Pallister-Hall-like syndrome","type":"exact"},{"name":"congenital hypothalamic hamartoma syndrome","type":"exact"},{"name":"hamartoma of hypothalamus","type":"exact"},{"name":"hamartoma of the hypothalamus","type":"related"},{"name":"hypothalamic hamartoma","type":"exact"},{"name":"hypothalamic hamartomas","type":"exact"}],"termid":"MONDO:0009436","xrefs":{"Monarch":{"xref_id":"0009436"}}}


id: PBO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 1B","termid":"PBO:0046108"}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:26654377","PMID:25447994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: PBO:0017436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_developmental_progression_of","termid":"PBO:0017436"}


id: GO:0106332
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100698],"is_not":false,"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of double-stranded DNA near a double-strand/single-strand DNA junction.","definition_xrefs":["PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA endonuclease activity","termid":"GO:1990238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"ds/ssDNA junction-specific dsDNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106332","terms_by_termid":{"GO:0106332":null}}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_00714","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[73883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006533":null,"GO:0006567":null}}


id: FYPO:0002518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002517"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abolished cell cycle checkpoint arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic cell cycle checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0002518"}


id: PBO:0040126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 12","termid":"PBO:0040126"}


id: GO:1990854
data:
  {"annotated_genes":["SJAG_01116","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106579,114803],"is_not":false,"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"The attachment of a lytic vacuole to the endoplasmic reticulum, which may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:26283797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"maintenance of ER location","termid":"GO:0051685"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuole-ER tethering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuole-ER attachment","type":"exact"},{"name":"vacuole-endoplasmic reticulum attachment","type":"exact"},{"name":"vacuole-endoplasmic reticulum tethering","type":"exact"}],"termid":"GO:1990854","terms_by_termid":{"GO:1990854":null}}


id: GO:1990502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis.","definition_xrefs":["GOC:kmv","PMID:22654674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule maturation","termid":"GO:0061792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule maturation","synonyms":[{"name":"dense core vesicle maturation","type":"exact"}],"termid":"GO:1990502"}


id: GO:0003149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membranous septum morphogenesis","termid":"GO:0003149"}


id: GO:1990852
data:
  {"annotated_genes":["SJAG_03437","SJAG_05319","SJAG_01224","SJAG_05220","SJAG_01211","SJAG_01775","SJAG_05266","SJAG_02731","SJAG_01371","SJAG_01546","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109464,116523,98132,88604,107061,90448,113694,89211,96280,100041,108454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule to the spindle pole body, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to spindle pole body","termid":"GO:0071989"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990852","terms_by_termid":{"GO:1990976":null}}


id: GO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.","definition_xrefs":["PMID:22171259","PMID:34084167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","secondary_identifiers":["VZ:4477"],"synonyms":[{"name":"inhibition of host TBK1 by virus","type":"related"},{"name":"suppression by virus of host TBK1 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","type":"narrow"},{"name":"symbiont-mediated suppression of host TKB signaling","type":"related"}],"termid":"GO:0039723"}


id: PBO:0049118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 183","termid":"PBO:0049118"}


id: MOD:01304
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N4-hexosaminyl-L-lysine, as a synthetic peptide protectting group.","definition_xrefs":["Unimod:454#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N6-hexosaminylated lysine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01304"}


id: FYECO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which histidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ his","synonyms":[{"name":"histidine added","type":"exact"}],"termid":"FYECO:0000224"}


id: PBO:0088952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2406 family conserved fungal protein","termid":"PBO:0088952"}


id: RO:HOM0000013
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Syntenic homology that involves chromosomes of different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_syntenic_homology_relationship_with","termid":"RO:HOM0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_syntenic_orthology_relationship_with","synonyms":[{"name":"syntenic orthologous to","type":"exact"}],"termid":"RO:HOM0000013"}


id: GO:0102593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylanthranilate + UDP-alpha-D-glucose = N-methylanthraniloyl-beta-D-glucopyranose + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose: N-methylanthranilate glucosyltransferase activity (obsolete GO:0102593)","termid":"GO:0102593"}


id: GO:2000122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of stomatal complex development","termid":"GO:2000038"},{"relation_name":"negatively_regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal complex development","termid":"GO:2000122"}


id: GO:0008055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ocellus pigments, general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates.","definition_xrefs":["GOC:ai","PMID:18421706","PMID:15176085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ocellus pigment biosynthetic process","synonyms":[{"name":"ocellus pigment anabolism","type":"exact"},{"name":"ocellus pigment biosynthesis","type":"exact"},{"name":"ocellus pigment formation","type":"exact"},{"name":"ocellus pigment synthesis","type":"exact"}],"termid":"GO:0008055"}


id: FYPO:0004023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0004023"}


id: GO:1905300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal epithelial cell development.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:23904268","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial cell development","termid":"GO:1905298"},{"relation_name":"positively_regulates","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal epithelial cell development","synonyms":[{"name":"activation of intestinal epithelial cell development","type":"narrow"},{"name":"up regulation of intestinal epithelial cell development","type":"exact"},{"name":"up-regulation of intestinal epithelial cell development","type":"exact"},{"name":"upregulation of intestinal epithelial cell development","type":"exact"}],"termid":"GO:1905300"}


id: GO:0005962
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Mitochondrial complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial isocitrate dehydrogenase complex (NAD+) (obsolete GO:0005962)","termid":"GO:0005962"}


id: PBO:0053517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 507","termid":"PBO:0053517"}


id: MONDO:0020001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory or thoracic malformation","secondary_identifiers":["GARD:19385","MEDGEN:1842800","Orphanet:97957","UMLS:C5681559"],"termid":"MONDO:0020001","xrefs":{"Monarch":{"xref_id":"0020001"}}}


id: SO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a deletion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion_breakpoint","synonyms":[{"name":"deletion breakpoint","type":"exact"}],"termid":"SO:0001415"}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: PBO:0074901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74","termid":"PBO:0074901"}


id: PBO:0075362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: PBO:0083953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress; null mutation is complemented by human TUBG1","termid":"PBO:0083953"}


id: PBO:0064681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 17","termid":"PBO:0064681"}


id: GO:0140857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 45) + ATP = histone H3-phosphothreonine (position 45) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 45 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016301","GO:0003824","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"histone H3T45 kinase activity","synonyms":[{"name":"histone kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T45 specific)","type":"exact"}],"termid":"GO:0140857"}


id: MONDO:0030043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type iit","secondary_identifiers":["MEDGEN:1709627","OMIM:618885","UMLS:C5394387"],"synonyms":[{"name":"CDG2T","type":"exact"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIt","type":"exact"},{"name":"Cdg Iit","type":"exact"}],"termid":"MONDO:0030043","xrefs":{"Monarch":{"xref_id":"0030043"}}}


id: MOD:01841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two or an L-cysteine residue and an L-serine residue by a thioether bond to form a lanthionine, either D- or L- or meso-lanthionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"lanthionine","synonyms":[{"name":"2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)sulfanediyl","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)sulfide","type":"exact"}],"termid":"MOD:01841"}


id: GO:0015109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chromate from one side of a membrane to the other. Chromate is the anion of chromic acid, H2CrO4 (aq) or CrO3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chromate transmembrane transporter activity","termid":"GO:0015109"}


id: GO:0097018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.","definition_xrefs":["GOC:yaf","PMID:18431508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal protein absorption","termid":"GO:0097017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal albumin absorption","termid":"GO:0097018"}


id: MONDO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhizomelic syndrome, Urbach type is a rare primary bone dysplasia characterized by upper limbs rhizomelia and other skeletal anomalies (e.g. short stature, dislocated hips, digitalization of the thumb with bifid distal phalanx), craniofacial features (e.g. microcephaly, large anterior fontanelle, fine and sparse scalp hair, depressed nasal bridge, high arched palate, micrognathia, short neck), congenital heart defects (e.g. pulmonary stenosis), delayed psychomotor development and mild flexion contractures of elbows. Radiologic evaluation may reveal flared epiphyses, platyspondyly and/or digital anomalies.","definition_xrefs":["Orphanet:3098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic syndrome, Urbach type","secondary_identifiers":["UMLS:C1849382","GARD:4705","MEDGEN:376574","MESH:C537611","OMIM:268250"],"synonyms":[{"name":"familial rhizomelic dysplasia","type":"related"},{"name":"rhizomelic dysplasia, familial","type":"related"},{"name":"rhizomelic syndrome","type":"related"}],"termid":"MONDO:0009996","xrefs":{"Monarch":{"xref_id":"0009996"}}}


id: PBO:0063801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA1 antisense RNA 1","termid":"PBO:0063801"}


id: MONDO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune polyendocrine syndrome type 2 (obsolete MONDO:0000272)","termid":"MONDO:0000272","xrefs":{"Monarch":{"xref_id":"0000272"}}}


id: PBO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype,_adaptive_response_to_loss_of_mtDNA_(obsolete_FYPO:0000221)","termid":"PBO:0031213"}


id: GO:1990414
data:
  {"annotated_genes":["SJAG_00796","SJAG_03926","SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71688,76791,77028],"is_not":false,"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["PMID:16888651","PMID:12820977","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_03926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414","terms_by_termid":{"GO:1990414":null}}


id: GO:0071863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of cell proliferation in the bone marrow.","definition_xrefs":["GOC:mah","GOC:yaf","PMID:17063141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in bone marrow","synonyms":[{"name":"regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071863"}


id: MONDO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A2-related Ehlers-Danlos syndrome","termid":"MONDO:0100606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type, 2","secondary_identifiers":["DOID:0080728","GARD:16256","OMIM:617821"],"synonyms":[{"name":"EDS 7B","type":"exact"},{"name":"EDS VIIB","type":"exact"},{"name":"EDSARTH2","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 2","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VIIb, autosomal dominant","type":"exact"}],"termid":"MONDO:0040501","xrefs":{"Monarch":{"xref_id":"0040501"}}}


id: FYPO:0007814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is increased during a cellular response to hydroxyurea.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea","synonyms":[{"name":"increased rate of DNA replication elongation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to HU","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007814"}


id: GO:0007053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during a meiotic cell cycle in males. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150","GO:0044085","GO:0140013"],"is_obsolete":false,"name":"spindle assembly involved in male meiosis","termid":"GO:0007053"}


id: PBO:0046605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 7","termid":"PBO:0046605"}


id: GO:0035512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolytic removal of the methyl group from one or more nucleotides within a DNA molecule.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolytic DNA demethylation (obsolete GO:0035512)","termid":"GO:0035512"}


id: PBO:0046176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK3","termid":"PBO:0046176"}


id: PBO:0059062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3A","termid":"PBO:0059062"}


id: MONDO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipples inverted","secondary_identifiers":["OMIM:163600","UMLS:C0269269","MEDGEN:82844"],"synonyms":[{"name":"Mammillae Invertitae","type":"related"},{"name":"nipples inverted","type":"exact"}],"termid":"MONDO:0008100","xrefs":{"Monarch":{"xref_id":"0008100"}}}


id: GO:0034085
data:
  {"annotated_genes":["SJAG_01644","SJAG_00796","SJAG_03377"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73734],"is_not":false,"summary":null,"term":"GO:0034085"},{"annotations":[76790,100455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034087"}]},"cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become associated with each other during S phase.","definition_xrefs":["GOC:jh","GOC:mah","PMID:14623866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01644":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"establishment of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034085","terms_by_termid":{"GO:0034085":null,"GO:0034087":null}}


id: PBO:0113316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of pheromone response and mating; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0113316"}


id: MONDO:0019051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease (obsolete MONDO:0019051)","termid":"MONDO:0019051","xrefs":{"Monarch":{"xref_id":"0019051"}}}


id: GO:0006189
data:
  {"annotated_genes":["SJAG_02364","SJAG_01081","SJAG_02850","SJAG_01814","SJAG_04681","SJAG_03140","SJAG_03355","SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57122,58263,60495,65405,66780,71677,73351,78533],"is_not":false,"summary":null,"term":"GO:0006189"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.","definition_xrefs":["ISBN:0716720094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IMP biosynthetic process","termid":"GO:0006188"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"'de novo' IMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"'de novo' IMP anabolism","type":"exact"},{"name":"'de novo' IMP biosynthesis","type":"exact"},{"name":"'de novo' IMP formation","type":"exact"},{"name":"'de novo' IMP synthesis","type":"exact"},{"name":"'de novo' purine biosynthesis","type":"broad"},{"name":"'de novo' purine biosynthetic process","type":"broad"}],"termid":"GO:0006189","terms_by_termid":{"GO:0006189":null}}


id: PBO:0116674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 5","termid":"PBO:0116674"}


id: MONDO:0007289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in homozygous or compound heterozygous mutation in the GCNT2 gene on chromosome 6p24.","definition_xrefs":["DOID:0110242","PMID:11739194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 13 with adult I phenotype","secondary_identifiers":["UMLS:C3805373","MEDGEN:811703","OMIM:116700"],"synonyms":[{"name":"CTRCT13","type":"exact"},{"name":"cataract 13 with ADULT I phenotype","type":"related"},{"name":"cataract 13 with adult I phenotype","type":"exact"}],"termid":"MONDO:0007289","xrefs":{"Monarch":{"xref_id":"0007289"}}}


id: GO:1900344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"activation of methane biosynthetic process from dimethyl sulfide","type":"narrow"},{"name":"up regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"up-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"upregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"}],"termid":"GO:1900344"}


id: MONDO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by abnormalities in the development of the sexual characteristics.","definition_xrefs":["NCIT:C103186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of sexual differentiation","secondary_identifiers":["NANDO:2100140","Orphanet:90771","SCTID:39179006","MEDGEN:415936","MESH:D012734","MedDRA:10070597","DOID:1923","UMLS:C2930619","GTR:AN1172969"],"synonyms":[{"name":"CARD","type":"broad"},{"name":"DSD","type":"broad"},{"name":"conditions affecting reproductive development","type":"exact"},{"name":"differences of sex development","type":"exact"},{"name":"disorder of sex development","type":"exact"},{"name":"disorder of sex differentiation","type":"exact"},{"name":"disorder of sexual differentiation","type":"exact"},{"name":"disorders of sex development","type":"exact"},{"name":"disorders of sex development (DSD)","type":"related"},{"name":"intersex","type":"exact"},{"name":"intersex conditions","type":"exact"},{"name":"sex differentiation disease","type":"exact"},{"name":"sex differentiation disorder","type":"exact"},{"name":"sexual differentiation disorder","type":"exact"}],"termid":"MONDO:0002145","xrefs":{"Monarch":{"xref_id":"0002145"}}}


id: GO:1990399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed epithelium.","definition_xrefs":["PMID:19845688","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium regeneration","synonyms":[{"name":"regeneration of epithelium","type":"exact"}],"termid":"GO:1990399"}


id: GO:0090532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate.","definition_xrefs":["GOC:yaf","PMID:11153268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate","synonyms":[{"name":"L-ascorbic acid biosynthesis via UDP-alpha-D-glucuronate","type":"related"}],"termid":"GO:0090532"}


id: GO:0009083
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70895"],"synonyms":[{"name":"branched chain family amino acid breakdown","type":"exact"},{"name":"branched chain family amino acid catabolic process","type":"exact"},{"name":"branched chain family amino acid catabolism","type":"exact"},{"name":"branched chain family amino acid degradation","type":"exact"}],"termid":"GO:0009083","terms_by_termid":{"GO:0006574":null}}


id: PBO:0039933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 38","termid":"PBO:0039933"}


id: PBO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transporter inducer Gti1","termid":"PBO:0000318"}


id: MONDO:0012595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leprosy in which the cause of the disease is a mutation in the LTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 4","secondary_identifiers":["OMIM:610988","UMLS:C1970254","MEDGEN:370866"],"synonyms":[{"name":"LPRS4","type":"related"},{"name":"LTA leprosy","type":"exact"},{"name":"leprosy caused by mutation in LTA","type":"exact"},{"name":"leprosy, early-onset, susceptibility to","type":"related"},{"name":"leprosy, susceptibility to, 4","type":"exact"},{"name":"leprosy, susceptibility to, type 4","type":"exact"},{"name":"susceptibility to leprosy 4","type":"related"}],"termid":"MONDO:0012595","xrefs":{"Monarch":{"xref_id":"0012595"}}}


id: PBO:0005539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec7","termid":"PBO:0005539"}


id: PBO:0091694
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdr1-Related Transcription factor","termid":"PBO:0091694"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: PBO:0114867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly chaperone Ssc1","termid":"PBO:0114867"}


id: GO:0060809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The epithelial to mesenchymal transition process in which a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal to mesenchymal transition involved in gastrulation","termid":"GO:0060809"}


id: GO:0008648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A family of hormones that stimulate secretion of saliva and cause smooth muscle contraction and vasodilation.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tachykinin (obsolete GO:0008648)","synonyms":[{"name":"tachykinin","type":"exact"}],"termid":"GO:0008648"}


id: FYPO:0005831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is abnormal. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"abnormal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005831"}


id: PBO:0006998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly Usb1 (predicted)","termid":"PBO:0006998"}


id: FYPO:0007696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is increased.","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"increased DNA strand exchange inhibitor activity","synonyms":[{"name":"increased RecA-family recombinase inhibitor activity","type":"exact"},{"name":"increased negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007696"}


id: MONDO:0016532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lennox-Gastaut syndrome (LGS) belongs to the group of severe childhood epileptic encephalopathies.","definition_xrefs":["Orphanet:2382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"Lennox-Gastaut syndrome","secondary_identifiers":["MESH:D065768","icd11.foundation:651135242","NANDO:2200879","NORD:1358","SCTID:230418006","UMLS:C0238111","GARD:9912","DOID:0050561","MedDRA:10048816","MEDGEN:116044","NCIT:C84816","NANDO:1200591","OMIM:606369"],"synonyms":[{"name":"LGS","type":"exact"},{"name":"Lennox syndrome","type":"exact"},{"name":"encephalopathy of childhood","type":"related"},{"name":"epileptic encephalopathy Lennox-Gastaut type","type":"related"},{"name":"macrocephaly and epileptic encephalopathy","type":"related"}],"termid":"MONDO:0016532","xrefs":{"Monarch":{"xref_id":"0016532"}}}


id: PBO:0029368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029368"}


id: PBO:0036287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch RNA-binding protein, involved in splicing (predicted)","termid":"PBO:0036287"}


id: GO:0019703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of coenzyme A and peptidyl-cysteine to form L-cysteine coenzyme A disulfide.","definition_xrefs":["RESID:AA0306"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme A-peptidyl-cysteine covalent linking (obsolete GO:0019703)","termid":"GO:0019703"}


id: MONDO:1012560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplastic gangliocytoma of the cerebellum, non-human animal","termid":"MONDO:1011826"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic gangliocytoma of the cerebellum, domestic cat","secondary_identifiers":["OMIA:002529-9685"],"termid":"MONDO:1012560","xrefs":{"Monarch":{"xref_id":"1012560"}}}


id: MONDO:0007470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by multiple doughnut-shaped hyperostotic or osteosclerotic lesions of the calvaria.","definition_xrefs":["Orphanet:85192"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"calvarial doughnut lesions-bone fragility syndrome","secondary_identifiers":["SCTID:720598005","MEDGEN:377572","MESH:C565089","UMLS:C1852022","OMIM:126550","GARD:16739","DOID:0080721"],"synonyms":[{"name":"calvarial doughnut lesions with bone fragility with or without spondylometaphyseal dysplasia","type":"exact"},{"name":"doughnut lesions of skull, familial","type":"related"},{"name":"familial doughnut lesions of skull","type":"exact"}],"termid":"MONDO:0007470","xrefs":{"Monarch":{"xref_id":"0007470"}}}


id: PBO:0073594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature homeobox","termid":"PBO:0073594"}


id: GO:0032291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a glial cell membrane closes around an axon in the central nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon ensheathment in central nervous system","synonyms":[{"name":"ensheathment of axons in central nervous system","type":"exact"}],"termid":"GO:0032291"}


