# terms

id: MONDO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of cattle and other herbivores with the giant liver fluke Fascioloides magna. It is characterized by extensive destruction of the liver parenchyma.","definition_xrefs":["MESH:D005213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascioloidiasis","secondary_identifiers":["UMLS:C0015655","DOID:1217","SCTID:69550000","MEDGEN:8791"],"termid":"MONDO:0005759","xrefs":{"Monarch":{"xref_id":"0005759"}}}


id: GO:0110109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["GOC:ha","PMID:11861482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"},{"relation_name":"negatively_regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived wing vein specification","termid":"GO:0110109"}


id: PR:O42905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and recombination protein rti1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.14","synonyms":[{"name":"Spom972h-rti1","type":"exact"},{"name":"rad twenty-two isogene 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rad22 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42905"}


id: MONDO:0020417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anatomic abnormality that occurs during embryonic development, in which the aortic arch is right-sided.","definition_xrefs":["NCIT:C103917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right aortic arch","secondary_identifiers":["GARD:19640","HP:0012020","Orphanet:99081","MedDRA:10067407","UMLS:C0035615","icd11.foundation:769265824","SCTID:111321007","MEDGEN:48474"],"synonyms":[{"name":"right aortic arch","type":"exact"},{"name":"right aortic arch (disease)","type":"exact"}],"termid":"MONDO:0020417","xrefs":{"Monarch":{"xref_id":"0020417"}}}


id: GO:0033389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine via agmatine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine, via agmatine","synonyms":[{"name":"putrescine anabolism from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthesis from arginine, using agmatinase","type":"exact"},{"name":"putrescine biosynthetic process from arginine, using agmatinase","type":"exact"},{"name":"putrescine formation from arginine, using agmatinase","type":"exact"},{"name":"putrescine synthesis from arginine, using agmatinase","type":"exact"}],"termid":"GO:0033389"}


id: MONDO:0019241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":0,"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of the gamma-glutamyl cycle","secondary_identifiers":["icd11.foundation:34853044","GARD:18970","UMLS:C0268517","MEDGEN:541345","SCTID:9128006","Orphanet:79196"],"synonyms":[{"name":"disorder of gamma-glutamyl cycle","type":"related"},{"name":"disorder of the gamma-glutamyl cycle","type":"related"}],"termid":"MONDO:0019241","xrefs":{"Monarch":{"xref_id":"0019241"}}}


id: PBO:0087301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Site-specific endonuclease; required for gene conversion at the MAT locus (homothallic switching) through the generation of a ds DNA break; expression restricted to mother cells in late G1 as controlled by Swi4p-Swi6p, Swi5p, and Ash1p","termid":"PBO:0087301"}


id: FYPO:0007374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in centromeric regions is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone methylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone methylation during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at centromere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007374"}


id: PBO:0060524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0060524"}


id: GO:0140722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycophenolic acid (MPA). MPA is the first isolated antibiotic natural product in the world obtained from a culture of Penicillium brevicompactum in 1893.","definition_xrefs":["PMID:26751579","PMID:31209052","PMID:21398490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"mycophenolic acid biosynthetic process","synonyms":[{"name":"MPA anabolism","type":"broad"},{"name":"MPA biosynthesis","type":"broad"},{"name":"MPA formation","type":"broad"},{"name":"MPA synthesis","type":"broad"},{"name":"mycophenolic acid anabolism","type":"exact"},{"name":"mycophenolic acid biosynthesis","type":"exact"},{"name":"mycophenolic acid formation","type":"exact"},{"name":"mycophenolic acid synthesis","type":"exact"}],"termid":"GO:0140722"}


id: GO:1901163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophoblast cell migration","termid":"GO:1901163"}


id: GO:0099557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, mediated by transynaptic protein complexes, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos","PMID:19029886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission","termid":"GO:0099557"}


id: GO:0042463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of photoreceptors, sensory cells that react to the presence of light, found in the ocellus.","definition_xrefs":["ISBN:0192800981","GOC:jl","PMID:11542766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell development","secondary_identifiers":["GO:0001749"],"synonyms":[{"name":"non-eye photoreceptor development","type":"broad"}],"termid":"GO:0042463"}


id: MONDO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the structures of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ocular cancer","secondary_identifiers":["NCIT:C4767","MEDGEN:105418","ICD9:190.8","MESH:D005134","UMLS:C0496836","ICD9:239.89","DOID:2174","SCTID:371486001"],"synonyms":[{"name":"cancer of eye","type":"exact"},{"name":"cancer of eyeball of camera-type eye","type":"exact"},{"name":"cancer of the eye","type":"exact"},{"name":"eye cancer","type":"exact"},{"name":"eye neoplasm","type":"broad"},{"name":"eye neoplasm, malignant","type":"exact"},{"name":"eyeball of camera-type eye cancer","type":"exact"},{"name":"malignant eye neoplasm","type":"exact"},{"name":"malignant eye tumor","type":"exact"},{"name":"malignant eye tumour","type":"exact"},{"name":"malignant eyeball of camera-type eye neoplasm","type":"exact"},{"name":"malignant neoplasm of eye","type":"exact"},{"name":"malignant neoplasm of eyeball of camera-type eye","type":"exact"},{"name":"malignant neoplasm of the eye","type":"exact"},{"name":"malignant ocular neoplasm","type":"exact"},{"name":"malignant ocular tumor","type":"exact"},{"name":"malignant ocular tumour","type":"exact"},{"name":"malignant tumor of eye","type":"exact"},{"name":"malignant tumor of the eye","type":"exact"},{"name":"malignant tumour of eye","type":"exact"},{"name":"malignant tumour of the eye","type":"exact"},{"name":"neoplasm of eye","type":"broad"},{"name":"neoplasm of eye proper","type":"related"},{"name":"ocular tumor","type":"broad"},{"name":"ocular tumour","type":"broad"}],"termid":"MONDO:0002236","xrefs":{"Monarch":{"xref_id":"0002236"}}}


id: PBO:0113046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin segregase involved in DNA replication; ATPase activity, stimulated by S phase CDK-dependent phosphorylation, is coupled to nucleosome disassembly, promoting DNA replication; regulates cell-cycle-dependent histone gene expression; contains AAA+-ATPase domains and a non-canonical bromodomain; hexameric; relocalizes to the cytosol in response to hypoxia; human ortholog ATAD2 is a coregulator of oncogenic transcription factors and an oncogene overexpressed in cancers with poor prognosis","termid":"PBO:0113046"}


id: PBO:0085507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: MONDO:0004526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm of the uterine corpus. Representative examples include leiomyoma, leiomyosarcoma, and endometrial stromal sarcoma.","definition_xrefs":["NCIT:C40179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed endometrial stromal and smooth muscle tumor","secondary_identifiers":["UMLS:C1513364","MEDGEN:269077","NCIT:C40178","DOID:8302"],"synonyms":[{"name":"Stromomyoma","type":"exact"},{"name":"mixed endometrial stromal and smooth muscle neoplasm","type":"exact"},{"name":"uterine corpus soft tissue neoplasm","type":"exact"}],"termid":"MONDO:0004526","xrefs":{"Monarch":{"xref_id":"0004526"}}}


id: GO:1901819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-zeacarotene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:6060456","UniPathway:UPA00804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-zeacarotene metabolic process","synonyms":[{"name":"alpha-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901819"}


id: MOD:00265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound phycourobilin.","definition_xrefs":["PubMed:3838665","PubMed:3208761","PubMed:3838747","PubMed:8876649","RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"phycourobilin-bis-L-cysteine","synonyms":[{"name":"3,18-bis(1-[(R)-2-amino-2-carboxyethyl]sulfanylethyl)-2,7,13,17-tetramethyl-1,19-dioxo-4,5,15,16-tetrahydro-(21H,22H,24H)-bilene-b-8,12-dipropanoic acid","type":"exact"},{"name":"3,18-bis(1-[(R)-2-amino-2-carboxyethyl]sulfanylethyl)-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-4,5,15,16-tetrahydro-(21H,22H,24H)-bilene-b-1,19(4H,16H)-dione","type":"exact"},{"name":"BINDING Phycourobilin chromophore (covalent; via 2 links)","type":"exact"},{"name":"PUB","type":"exact"},{"name":"phycourobilin biscysteine adduct","type":"exact"},{"name":"phycourobilin-bis-L-cysteine","type":"exact"}],"termid":"MOD:00265"}


id: PBO:0066860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 160","termid":"PBO:0066860"}


id: PBO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase Fkh1","termid":"PBO:0008392"}


id: PBO:0065950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD17 pseudogene 1","termid":"PBO:0065950"}


id: PBO:0119636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARNT2 antisense RNA 1","termid":"PBO:0119636"}


id: GO:0019535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric-vibriobactin ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ferric-vibriobactin transmembrane transporter activity","termid":"GO:0019535"}


id: MONDO:0043975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome associated with damage to the spinal cord above the mid thoracic level (see SPINAL CORD INJURIES) characterized by a marked increase in the sympathetic response to minor stimuli such as bladder or rectal distention. Manifestations include HYPERTENSION; TACHYCARDIA (or reflex bradycardia); FEVER; FLUSHING; and HYPERHIDROSIS. Extreme hypertension may be associated with a STROKE. (From Adams et al., Principles of Neurology, 6th ed, pp538 and 1232; J Spinal Cord Med 1997;20(3):355-60)","definition_xrefs":["MESH:D020211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autonomic dysreflexia","secondary_identifiers":["MEDGEN:66758","icd11.foundation:1401282234","UMLS:C0238015","SCTID:129618003"],"synonyms":[{"name":"Dysreflexia, autonomic","type":"related"},{"name":"Dysreflexia, spinal autonomic","type":"related"},{"name":"Dysreflexias, autonomic","type":"related"},{"name":"Dysreflexias, spinal autonomic","type":"related"},{"name":"autonomic Dysreflexia, spinal","type":"related"},{"name":"autonomic Dysreflexias","type":"related"},{"name":"autonomic Dysreflexias, spinal","type":"related"},{"name":"autonomic Hyperreflexias","type":"related"},{"name":"autonomic dysreflexia","type":"exact"},{"name":"autonomic hyperreflexia","type":"related"},{"name":"dysreflexia","type":"related"},{"name":"hyperreflexia, autonomic","type":"related"},{"name":"hyperreflexias, autonomic","type":"related"},{"name":"spinal autonomic Dysreflexia","type":"related"},{"name":"spinal autonomic Dysreflexias","type":"related"}],"termid":"MONDO:0043975","xrefs":{"Monarch":{"xref_id":"0043975"}}}


id: GO:0000938
data:
  {"annotated_genes":["SJAG_04902","SJAG_03963","SJAG_01645","SJAG_02811"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71711,80479,81417,96646],"is_not":false,"summary":null,"term":"GO:0000938"}]},"cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles.","definition_xrefs":["GOC:rn","GOC:clt","PMID:10637310","PMID:12077354","PMID:12446664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01645":null,"SJAG_02811":null,"SJAG_03963":null,"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"GARP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi associated retrograde protein complex","type":"exact"},{"name":"VFT tethering complex","type":"exact"},{"name":"Vps fifty three tethering complex","type":"exact"}],"termid":"GO:0000938","terms_by_termid":{"GO:0000938":null}}


id: PBO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035963"}


id: MONDO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal necrotizing pneumonia is a rare, bacterial, pulmonary infectious disease, caused by a Panton-Valentine leukocidin-producing Staphylococcus aureus strain, characterized by severe respiratory failure, extensive, rapidly progressing pneumonia and hemorrhagic lung necrosis. Patients typically present with influenza-like symptoms, such as fever, cough, and chest pain, as well as hemoptysis, hypotension, leukopenia, and severe respiratory symptoms that rapidly evolve to acute respiratory distress syndrome and septic shock. High mortality is associated.","definition_xrefs":["Orphanet:36238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal necrotizing pneumonia","secondary_identifiers":["UMLS:C4706659","MEDGEN:1637863","GARD:18821","SCTID:763888005"],"termid":"MONDO:0018183","xrefs":{"Monarch":{"xref_id":"0018183"}}}


id: PBO:0039049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with FG repeats 1","termid":"PBO:0039049"}


id: PR:Q92347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.02c","secondary_identifiers":["UniProtKB:Q92347"],"synonyms":[{"name":"Spom972h-NOP9","type":"exact"},{"name":"pumilio domain-containing protein nop9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92347"}


id: MONDO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete globe disease (obsolete MONDO:0001524)","termid":"MONDO:0001524","xrefs":{"Monarch":{"xref_id":"0001524"}}}


id: PBO:0071582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a","termid":"PBO:0071582"}


id: GO:0006790
data:
  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id: PR:Q9UUK0
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.08c gene.","definition_xrefs":["UniProtKB:Q9UUK0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase C1952.08c homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.08c","synonyms":[{"name":"PNP/PMP oxidase C1952.08c homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx C1952.08c homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1952.08c","type":"exact"}],"termid":"PR:Q9UUK0"}


id: MONDO:0800447
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, platelet-type, 13, susceptibility to","secondary_identifiers":["UMLS:C3279614","MEDGEN:481244","OMIM:614009"],"synonyms":[{"name":"BDPLT13","type":"exact"},{"name":"bleeding disorder, platelet-type, 13, susceptibility to","type":"exact"},{"name":"bleeding disorder, susceptibility to, due to defective platelet thromboxane A2 receptor","type":"exact"},{"name":"susceptibility to platelet-type bleeding disorder 13","type":"exact"}],"termid":"MONDO:0800447","xrefs":{"Monarch":{"xref_id":"0800447"}}}


id: GO:0060995
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in kidney development","synonyms":[{"name":"cell-cell signalling involved in kidney development","type":"exact"}],"termid":"GO:0060995"}


id: GO:0071613
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id: PBO:0014290
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRE9 family cell wall 1,6-beta-glucan biosynthesis protein (predicted)","termid":"PBO:0014290"}


id: GO:0009052
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id: FYPO:0007902
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id: PBO:0001477
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa1 (predicted)","termid":"PBO:0001477"}


id: PBO:0041497
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 57","termid":"PBO:0041497"}


id: MONDO:0017678
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which punctate palmoplantar keratoderma is a major feature..","gene_count":0,"genotype_count":0,"name":"obsolete obsolete disease with punctate palmoplantar keratoderma as a major feature (obsolete MONDO:0017678)","secondary_identifiers":["Orphanet:308023"],"synonyms":[{"name":"disease with punctate palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017678","xrefs":{"Monarch":{"xref_id":"0017678"}}}


id: MOD:01004
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id: MONDO:0013260
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id: MONDO:1011963
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proportionate dwarfism with inflammatory lesions, non-human animal","secondary_identifiers":["OMIA:001686"],"termid":"MONDO:1011963","xrefs":{"Monarch":{"xref_id":"1011963"}}}


id: GO:0017098
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sulfonylurea receptor, a regulatory subunit of the ATP-sensitive potassium ion channel.","definition_xrefs":["GOC:ceb","PMID:11938023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"sulfonylurea receptor binding","synonyms":[{"name":"sulfonylurea receptor ligand","type":"narrow"},{"name":"sulphonylurea receptor binding","type":"exact"}],"termid":"GO:0017098"}


id: PBO:0076552
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 3","termid":"PBO:0076552"}


id: PBO:0001700
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein, human UBTD1 homolog","termid":"PBO:0001700"}


id: GO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils.","definition_xrefs":["PMID:19693541","ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von-Willerbrand-factor-A-domain-rich collagen trimer","termid":"GO:0140158"},{"relation_name":"part_of","term_name":"collagen beaded filament","termid":"GO:0098647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type VI trimer","termid":"GO:0005589"}


id: FYPO:0008310
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which meiotic telomere clustering is unstable, leading to transient unclustering of telomeres.","definition_xrefs":["PMID:34067465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic telomere clustering","termid":"FYPO:0000172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"unstable meiotic telomere clustering","termid":"FYPO:0008310"}


id: GO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTDP + H+ + phosphate.","definition_xrefs":["RHEA:19013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"TTPase activity","secondary_identifiers":["MetaCyc:THYMIDINE-TRIPHOSPHATASE-RXN","EC:3.6.1.39"],"synonyms":[{"name":"dTTP nucleotidohydrolase activity","type":"related"},{"name":"dTTPase activity","type":"related"},{"name":"deoxythymidine-5'-triphosphatase activity","type":"related"},{"name":"thymidine triphosphatase activity","type":"exact"},{"name":"thymidine triphosphate nucleotidohydrolase activity","type":"related"},{"name":"thymidine-triphosphatase activity","type":"exact"}],"termid":"GO:0050339"}


id: GO:0099118
data:
  {"annotated_genes":["SJAG_01211","SJAG_03540","SJAG_05319","SJAG_02731","SJAG_03437","SJAG_01224","SJAG_02336","SJAG_02761","SJAG_05220","SJAG_00851","SJAG_00918","SJAG_01546","SJAG_05266","SJAG_01371","SJAG_01297","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[103432,118296,99903,107827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[109464,88604,98132,116523,113694,108454,96280,89211,100041,107061,90448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of proteins.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02336":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule-based protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099118","terms_by_termid":{"GO:0099117":null,"GO:0140210":null,"GO:1990976":null}}


id: GO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a bitter taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of bitter taste","synonyms":[{"name":"bitter taste detection","type":"exact"},{"name":"perception of bitter taste, detection of chemical stimulus","type":"exact"},{"name":"perception of bitter taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of bitter taste","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of bitter taste","type":"exact"},{"name":"sensory transduction of bitter taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of bitter taste","type":"exact"}],"termid":"GO:0001580"}


id: MONDO:0027694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 23","secondary_identifiers":["MEDGEN:1645924","DOID:0080225","UMLS:C4693381","OMIM:617839","GARD:16262"],"synonyms":[{"name":"ALS23","type":"exact"},{"name":"amyotrophic lateral sclerosis 23","type":"related"}],"termid":"MONDO:0027694","xrefs":{"Monarch":{"xref_id":"0027694"}}}


id: PBO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 16","termid":"PBO:0075246"}


id: PBO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0035930"}


id: PBO:0073720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src like adaptor 2","termid":"PBO:0073720"}


id: MONDO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the spleen","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"spleen cancer","secondary_identifiers":["UMLS:C0153470","EFO:0007491","DOID:672","NCIT:C3383","NCIT:C3539","SCTID:127230005","MEDGEN:102271","ICD10CM:C26.1","MESH:D013160"],"synonyms":[{"name":"cancer of spleen","type":"exact"},{"name":"cancer of the spleen","type":"exact"},{"name":"malignant neoplasm of spleen","type":"exact"},{"name":"malignant neoplasm of the spleen","type":"exact"},{"name":"malignant spleen neoplasm","type":"exact"},{"name":"malignant splenic neoplasm","type":"exact"},{"name":"malignant splenic tumor","type":"exact"},{"name":"malignant splenic tumour","type":"exact"},{"name":"malignant tumor of spleen","type":"exact"},{"name":"malignant tumor of the spleen","type":"exact"},{"name":"malignant tumour of spleen","type":"exact"},{"name":"malignant tumour of the spleen","type":"exact"},{"name":"spleen cancer","type":"exact"},{"name":"spleen neoplasm","type":"broad"},{"name":"splenic cancer","type":"exact"},{"name":"splenic neoplasm","type":"broad"}],"termid":"MONDO:0005966","xrefs":{"Monarch":{"xref_id":"0005966"}}}


id: GO:0005200
data:
  {"annotated_genes":["SJAG_04003","SJAG_03145","SJAG_04387","SJAG_01384","SJAG_02509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58290,61525,64077,79572,108636],"is_not":false,"summary":null,"term":"GO:0005200"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01384":null,"SJAG_02509":null,"SJAG_03145":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cytoskeleton","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005200","terms_by_termid":{"GO:0005200":null}}


id: FYPO:0003658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the membrane of any part of the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to Golgi apparatus","termid":"FYPO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to Golgi membrane","synonyms":[{"name":"normal protein localisation to Golgi membrane","type":"exact"},{"name":"normal protein localization to Golgi membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0003658"}


id: GO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"positive regulation of respiratory burst","termid":"GO:0060267"},{"relation_name":"positively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"positive regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060265"}


id: MOD:00029
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-valine.","definition_xrefs":["PubMed:6692818","RESID:AA0020","ChEBI:30015","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine residue","synonyms":[{"name":"(2S)-2-amino-3-methylbutanoic acid","type":"exact"},{"name":"2-azanyl-3-methylbutanoic acid","type":"exact"},{"name":"L-valine","type":"exact"},{"name":"Val","type":"exact"},{"name":"alpha-amino-beta-methylbutyric acid","type":"exact"},{"name":"alpha-aminoisovaleric acid","type":"exact"}],"termid":"MOD:00029"}


id: MOD:00841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isothiocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiocyanate reagent derivatized residue","termid":"MOD:00841"}


id: GO:0052901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + spermine = 3-aminopropanal + H2O2 + spermidine. Weak activity with N(1)-acetylspermine. The Arabidopsis thaliana enzyme converts norspermine to norspermidine.","definition_xrefs":["RHEA:25804","EC:1.5.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"spermine oxidase activity","secondary_identifiers":["MetaCyc:RXN-9015","Reactome:R-HSA-141341","KEGG_REACTION:R09076"],"synonyms":[{"name":"spermine:oxygen oxidoreductase (spermidine-forming) activity","type":"broad"}],"termid":"GO:0052901"}


id: PR:Q9HDV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mor2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein mor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.04c","synonyms":[{"name":"Spom972h-mor2","type":"exact"},{"name":"morphological round protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV6"}


id: GO:0102712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A13 + 2-oxoglutarate + O2 = gibberellin A43 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A13,oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0102712)","termid":"GO:0102712"}


id: GO:0120542
data:
  {"annotated_genes":["SJAG_03370","SJAG_00240","SJAG_03822","SJAG_01414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98239,98240,114215,114216],"is_not":false,"summary":null,"term":"GO:0120542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanol + NAD+ = acetaldehyde + NADH + H+.","definition_xrefs":["RHEA:25290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ethanol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120542","terms_by_termid":{"GO:0120542":null}}


id: PBO:0054119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1485","termid":"PBO:0054119"}


id: GO:0043419
data:
  {"annotated_genes":["SJAG_02766","SJAG_04679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66733,73420],"is_not":false,"summary":null,"term":"GO:0043419"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of urea, the water soluble compound O=C-(NH2)2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea metabolic process","termid":"GO:0019627"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02766":null,"SJAG_04679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"urea catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"urea breakdown","type":"exact"},{"name":"urea catabolism","type":"exact"},{"name":"urea decomposition","type":"exact"},{"name":"urea degradation","type":"exact"}],"termid":"GO:0043419","terms_by_termid":{"GO:0043419":null}}


id: FYECO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vaccenic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vaccenic acid","termid":"FYECO:0000068"}


id: GO:0016281
data:
  {"annotated_genes":["SJAG_00507","SJAG_03223","SJAG_01954","SJAG_04772"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74231,75976,76566,86966],"is_not":false,"summary":null,"term":"GO:0016281"}]},"cv_name":"cellular_component","definition":"The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome.","definition_xrefs":["GOC:hb","PMID:32883864","PMID:8449919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01954":null,"SJAG_03223":null,"SJAG_04772":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 4F complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic cap-binding complex","type":"exact"},{"name":"eIF-4F","type":"exact"},{"name":"eukaryotic translation initiation factor 4 complex","type":"broad"}],"termid":"GO:0016281","terms_by_termid":{"GO:0016281":null}}


id: PBO:0076549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 1","termid":"PBO:0076549"}


id: PBO:0073311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small EDRK-rich factor 1A","termid":"PBO:0073311"}


id: PBO:0063263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 9","termid":"PBO:0063263"}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"},{"name":"increased longevity","type":"exact"}],"termid":"FYPO:0001309"}


id: PBO:0080480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 3-1, pseudogene","termid":"PBO:0080480"}


id: GO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigmentation","termid":"GO:0033059"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular pigment accumulation","termid":"GO:0043482"}


id: PR:P78917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-6-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03913","PRO:DNx","PANTHER:PTHR11469:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.05","secondary_identifiers":["UniProtKB:P78917"],"synonyms":[{"name":"GPI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PHI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPI","type":"exact"},{"name":"phosphoglucose isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphohexose isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78917"}


id: MONDO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature monodermal teratoma that arises from the ovary and is characterized by the presence of benign, thyroid-type tissues.","definition_xrefs":["NCIT:C40012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign struma ovarii","secondary_identifiers":["DOID:5209"],"synonyms":[{"name":"benign struma ovarii","type":"exact"},{"name":"struma ovarii, benign","type":"exact"}],"termid":"MONDO:0003333","xrefs":{"Monarch":{"xref_id":"0003333"}}}


id: PBO:0088635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID, TFIIF, Ino80, SWI/SNF, and NuA4 complex YEATS family subunit Tfg3","termid":"PBO:0088635"}


id: FYPO:0005255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a carboxypeptidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal carboxypeptidase activity","termid":"FYPO:0005255"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: PBO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef2","termid":"PBO:0000349"}


id: PBO:0031877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53 (predicted)","termid":"PBO:0031877"}


id: GO:1904954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","PMID:22988876","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904954)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"}],"termid":"GO:1904954"}


id: PBO:0044106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member C1","termid":"PBO:0044106"}


id: PBO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase activator","termid":"PBO:0044542"}


id: GO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) = D-glucose(in).","definition_xrefs":["TC:2.A.1.1.6","TC:2.A.1.1.4","TC:2.A.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-glucose uniporter activity","synonyms":[{"name":"galactose, glucose uniporter activity","type":"narrow"},{"name":"glucose uniporter activity","type":"exact"}],"termid":"GO:0015304"}


id: PBO:0016967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Related Protein","termid":"PBO:0016967"}


id: PBO:0066580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of hemoglobinization and erythroid cell expansion","termid":"PBO:0066580"}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: PBO:0090568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1","termid":"PBO:0090568"}


id: GO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane raft, a small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalizes cellular processes.","definition_xrefs":["PMID:16645198","PMID:12648772","PMID:12803918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft organization","termid":"GO:0031579"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane raft assembly","synonyms":[{"name":"lipid raft assembly","type":"exact"},{"name":"lipid raft formation","type":"related"},{"name":"membrane raft formation","type":"related"}],"termid":"GO:0001765"}


id: PBO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EvC ciliary complex subunit 1","termid":"PBO:0046721"}


id: PBO:0055840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 1","termid":"PBO:0055840"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: PBO:0003407
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of the Chronological Lifespan","termid":"PBO:0003407"}


id: GO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron of the anterior lateral line ganglion.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line ganglion neuron differentiation","termid":"GO:0048891"},{"relation_name":"part_of","term_name":"anterior lateral line ganglion development","termid":"GO:0048907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line ganglion neuron differentiation","termid":"GO:0048908"}


id: PBO:0064885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Abeta","termid":"PBO:0064885"}


id: PBO:0026780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0026780"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: GO:1903439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of calcitonin family receptor activity. Calcitonin family receptors may form dimers, trimers or tetramers; adrenomedullin and amylin receptors have only been observed as dimers so far.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:12037140","PMID:18687416","PMID:10871296","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"calcitonin family receptor complex","termid":"GO:1903439"}


id: MONDO:0859577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LADD syndrome","termid":"MONDO:0007872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"lacrimoauriculodentodigital syndrome 2","secondary_identifiers":["MEDGEN:1824059","UMLS:C5774286","OMIM:620192","DOID:0081371"],"termid":"MONDO:0859577","xrefs":{"Monarch":{"xref_id":"0859577"}}}


id: MONDO:0100167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing COPD.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary disease, chronic obstructive, susceptibility to","secondary_identifiers":["MEDGEN:854229","UMLS:C3838076"],"termid":"MONDO:0100167","xrefs":{"Monarch":{"xref_id":"0100167"}}}


id: PBO:0070150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 64 pseudogene","termid":"PBO:0070150"}


id: PBO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_biotinylation_during_vegetative_growth","termid":"PBO:0036100"}


id: PBO:0064076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 110","termid":"PBO:0064076"}


id: GO:0007628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["ISBN:0198606907","GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult locomotory behavior","termid":"GO:0008344"},{"relation_name":"is_a","term_name":"walking behavior","termid":"GO:0090659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult walking behavior","synonyms":[{"name":"adult walking behaviour","type":"exact"}],"termid":"GO:0007628"}


id: PBO:0089281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas2","termid":"PBO:0089281"}


id: GO:0019679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propionate metabolic process, methylcitrate cycle","secondary_identifiers":["MetaCyc:PWY0-42"],"synonyms":[{"name":"propionate metabolism, methylcitrate cycle","type":"exact"}],"termid":"GO:0019679"}


id: PBO:0055165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2585","termid":"PBO:0055165"}


id: PBO:0066031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN guanine nucleotide release factor","termid":"PBO:0066031"}


id: GO:0050333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + thiamine triphosphate = thiamine diphosphate + H+ + phosphate.","definition_xrefs":["RHEA:11744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine triphosphate phosphatase activity","secondary_identifiers":["GO:0048253","MetaCyc:THIAMIN-TRIPHOSPHATASE-RXN","EC:3.6.1.28","KEGG_REACTION:R00618","Reactome:R-HSA-965067"],"synonyms":[{"name":"ThTPase activity","type":"related"},{"name":"thiamin-triphosphatase activity","type":"related"},{"name":"thiamine triphosphatase activity","type":"related"},{"name":"thiamine-triphosphatase activity","type":"related"},{"name":"thiamine-triphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050333"}


id: GO:0044089
data:
  {"annotated_genes":["SJAG_01794","SJAG_04597","SJAG_02342","SJAG_01837","SJAG_03048","SJAG_02169","SJAG_03453","SJAG_00973","SJAG_03421","SJAG_02990","SJAG_01114","SJAG_00766","SJAG_03241","SJAG_03936","SJAG_04468","SJAG_02379","SJAG_00142","SJAG_00082","SJAG_03851","SJAG_03704","SJAG_05290","SJAG_02332","SJAG_00514","SJAG_00718","SJAG_01188","SJAG_05289","SJAG_01805","SJAG_03342","SJAG_04509","SJAG_04666","SJAG_03631","SJAG_02671","SJAG_01771","SJAG_04776","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[108126,108219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[98472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[101903,89114,116279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[87344,92951,110947,90313,89332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[87669,105239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[89333,79718,91893,93281,106598,104726,112954,115074,117502,105938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[111018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[90655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[93895,86979,91894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[92968,88927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090070"},{"annotations":[89173,81353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[89466,86980,101913,110100,93285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[90656,109917,93853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00142":null,"SJAG_00514":null,"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01771":null,"SJAG_01794":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02379":null,"SJAG_02592":null,"SJAG_02671":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03241":null,"SJAG_03342":null,"SJAG_03421":null,"SJAG_03453":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03851":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05289":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular component biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044089","terms_by_termid":{"GO:0031031":null,"GO:0031453":null,"GO:0045899":null,"GO:0090053":null,"GO:0090055":null,"GO:0090070":null,"GO:0110161":null,"GO:0140281":null,"GO:1902917":null,"GO:1903024":null,"GO:1905561":null,"GO:1905758":null,"GO:2000786":null,"GO:2001178":null}}


id: GO:0072039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072039"}


id: PR:Q9C1W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mim1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.08","synonyms":[{"name":"Spom972h-mim1","type":"exact"}],"termid":"PR:Q9C1W7"}


id: MONDO:0026167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic neuromuscular disease (obsolete MONDO:0026167)","secondary_identifiers":["Orphanet:183497"],"termid":"MONDO:0026167","xrefs":{"Monarch":{"xref_id":"0026167"}}}


id: PR:Q09154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit Rieske, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10134:SF0","PRO:DNx","OMA:SCHPO03211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit Rieske, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.06","secondary_identifiers":["UniProtKB:Q09154"],"synonyms":[{"name":"RISP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UQCRFS1","type":"exact"},{"name":"complex III subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rieske iron-sulfur protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase iron-sulfur subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09154"}


id: PBO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 1","termid":"PBO:0046070"}


id: PBO:0068986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 230, pseudogene","termid":"PBO:0068986"}


id: PBO:0088589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1","termid":"PBO:0088589"}


id: PBO:0053662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 839","termid":"PBO:0053662"}


id: GO:0033418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"CUC codon-amino acid adaptor activity","synonyms":[{"name":"CTC codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033418"}


id: PBO:0110426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 1","termid":"PBO:0110426"}


id: GO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","PMID:16314491","PMID:1996351","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac epithelial to mesenchymal transition","synonyms":[{"name":"heart epithelial to mesenchymal transition","type":"exact"}],"termid":"GO:0060317"}


id: PBO:0066171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 4","termid":"PBO:0066171"}


id: GO:0009062
data:
  {"annotated_genes":["SJAG_02763","SJAG_00706","SJAG_04570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73135],"is_not":false,"summary":null,"term":"GO:0009062"},{"annotations":[74997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[113355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02763":null,"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-390918","Wikipedia:Fatty_acid_degradation"],"synonyms":[{"name":"fatty acid breakdown","type":"exact"},{"name":"fatty acid catabolism","type":"exact"},{"name":"fatty acid degradation","type":"exact"}],"termid":"GO:0009062","terms_by_termid":{"GO:0001561":null,"GO:0009062":null,"GO:0042758":null}}


id: PBO:0070651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 22","termid":"PBO:0070651"}


id: PBO:0059262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L28","termid":"PBO:0059262"}


id: _global:enabled_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","secondary_identifiers":["RO:0002333"],"termid":"_global:enabled_by"}


id: MONDO:0017537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Preaxial polydactyly of toes","termid":"MONDO:0017457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Preaxial polydactyly of toes, unilateral","secondary_identifiers":["icd11.foundation:841462147","Orphanet:295175"],"synonyms":[{"name":"bifid great toes, unilateral","type":"exact"},{"name":"bifid halluces, unilateral","type":"exact"},{"name":"bifid hallux, unilateral","type":"exact"}],"termid":"MONDO:0017537","xrefs":{"Monarch":{"xref_id":"0017537"}}}


id: PBO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 7","termid":"PBO:0048822"}


id: MONDO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome, occurring in the pediatric population, characterized by the normalization of proteinuria with the administration of corticosteroids.","definition_xrefs":["NCIT:C122797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid-resistant nephrotic syndrome","termid":"MONDO:0044765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome of childhood - steroid sensitive","secondary_identifiers":["SCTID:236380004","UMLS:C0403396","MEDGEN:588368"],"synonyms":[{"name":"nephrotic syndrome of childhood - steroid sensitive","type":"exact"},{"name":"steroid-responsive nephrotic syndrome","type":"exact"},{"name":"steroid-sensitive nephrotic syndrome","type":"exact"}],"termid":"MONDO:0044781","xrefs":{"Monarch":{"xref_id":"0044781"}}}


id: PBO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 16","termid":"PBO:0070343"}


id: PBO:0081928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 970, pseudogene","termid":"PBO:0081928"}


id: PBO:0084309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isoamyl acetate-hydrolyzing esterase; required in balance with alcohol acetyltransferase to maintain optimal amounts of isoamyl acetate, which is particularly important in sake brewing","termid":"PBO:0084309"}


id: GO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanolamine + 1-alkyl-sn-glycerol 3-phosphate.","definition_xrefs":["MetaCyc:3.1.4.39-RXN","EC:3.1.4.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alkylglycerophosphoethanolamine phosphodiesterase activity","secondary_identifiers":["RHEA:15965"],"synonyms":[{"name":"1-alkyl-sn-glycero-3-phosphoethanolamine ethanolaminehydrolase activity","type":"related"},{"name":"lysophospholipase D activity","type":"related"}],"termid":"GO:0047391"}


id: PATO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end.","definition_xrefs":["MP:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clavate","secondary_identifiers":["PATO:0001797"],"synonyms":[{"name":"club-like","type":"exact"},{"name":"club-shaped","type":"exact"},{"name":"clubbed","type":"exact"}],"termid":"PATO:0001883"}


id: GO:0008218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of light by certain enzyme-catalyzed reactions in cells.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bioluminescence","secondary_identifiers":["Wikipedia:Bioluminescence"],"termid":"GO:0008218"}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: FYPO:0006949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular S-methyl-L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during vegetative growth","type":"related"},{"name":"increased cellular S-methyl-L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006949"}


id: PBO:0067735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 34","termid":"PBO:0067735"}


id: PBO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP51A1 antisense RNA 1","termid":"PBO:0044492"}


id: PBO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4C","termid":"PBO:0043034"}


id: PBO:0091978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf19","termid":"PBO:0091978"}


id: MOD:01593
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01593"}


id: GO:0097734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.","definition_xrefs":["PMID:19442504","PMID:25392495","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular exosome biogenesis","synonyms":[{"name":"ILV assembly","type":"related"},{"name":"exosome assembly or secretion","type":"exact"},{"name":"exosome biogenesis","type":"exact"},{"name":"exosome production","type":"exact"},{"name":"intraluminal vesicle assembly","type":"related"}],"termid":"GO:0097734"}


id: GO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the microneme membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme lumen","termid":"GO:0034494"}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: PBO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0000939"}


id: GO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannitol(out) = protein histidine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannitol transmembrane transporter activity","termid":"GO:0015575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0003824","GO:0016740","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"mannitol PTS transporter activity","type":"exact"}],"termid":"GO:0022872"}


id: GO:0010770
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89328,95341,94066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"positively_regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010770","terms_by_termid":{"GO:0051519":null}}


id: GO:0004502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + H+ + NADPH + O2 = 3-hydroxy-L-kynurenine + H2O + NADP+.","definition_xrefs":["EC:1.14.13.9","RHEA:20545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"kynurenine 3-monooxygenase activity","secondary_identifiers":["MetaCyc:KYNURENINE-3-MONOOXYGENASE-RXN","Reactome:R-HSA-71200","KEGG_REACTION:R01960"],"synonyms":[{"name":"L-kynurenine,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"L-kynurenine-3-hydroxylase activity","type":"related"},{"name":"kynurenine 3-hydroxylase activity","type":"exact"},{"name":"kynurenine hydroxylase activity","type":"related"}],"termid":"GO:0004502"}


id: GO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart development","termid":"GO:0060973"}


id: PBO:0078169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 2","termid":"PBO:0078169"}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: GO:0048700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed acquires tolerance to severe drying, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["GOC:PO_curators","GOC:ki","GOC:jid","ISBN:9781405139830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"acquisition of desiccation tolerance","termid":"GO:0097439"},{"relation_name":"part_of","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance in seed","synonyms":[{"name":"acquisition of desiccation tolerance","type":"broad"}],"termid":"GO:0048700"}


id: SO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group II introns are found in rRNA, tRNA and mRNA of organelles in fungi, plants and protists, and also in mRNA in bacteria. They are large self-splicing ribozymes and have 6 structural domains (usually designated dI to dVI). A subset of group II introns also encode essential splicing proteins in intronic ORFs. The length of these introns can therefore be up to 3kb. Splicing occurs in almost identical fashion to nuclear pre-mRNA splicing with two transesterification steps. The 2' hydroxyl of a bulged adenosine in domain VI attacks the 5' splice site, followed by nucleophilic attack on the 3' splice site by the 3' OH of the upstream exon. Protein machinery is required for splicing in vivo, and long range intron to intron and intron-exon interactions are important for splice site positioning. Group II introns are further sub-classified into groups IIA and IIB which differ in splice site consensus, distance of bulged A from 3' splice site, some tertiary interactions, and intronic ORF phylogeny.","direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_II_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_II_intron"],"synonyms":[{"name":"group II intron","type":"exact"}],"termid":"SO:0000603"}


id: MONDO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glandular epithelial neoplasm that arises from the vagina and shows intestinal differentiation.","definition_xrefs":["NCIT:C40256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal adenoma","secondary_identifiers":["DOID:5402","MEDGEN:274377","UMLS:C1519913"],"synonyms":[{"name":"vagina adenoma","type":"exact"},{"name":"vaginal adenoma","type":"exact"}],"termid":"MONDO:0003434","xrefs":{"Monarch":{"xref_id":"0003434"}}}


id: PBO:0062879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 antisense RNA 1 (head to head)","termid":"PBO:0062879"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: PBO:0070494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 29","termid":"PBO:0070494"}


id: GO:0097675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).","definition_xrefs":["GOC:jd","PMID:15147268","GOC:vw","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Hrt3/Pof7 ubiquitin ligase complex","termid":"GO:0097675"}


id: MONDO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An empyema resulting from infection by Mycobacterium tuberculosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"empyema","termid":"MONDO:0005242"},{"relation_name":"is_a","term_name":"pleural tuberculosis","termid":"MONDO:0005922"},{"relation_name":"is_a","term_name":"pleural empyema","termid":"MONDO:0018667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous empyema","secondary_identifiers":["DOID:14305","MESH:D004654","NCIT:C34575","SCTID:14527007","MEDGEN:4929","UMLS:C0014014","EFO:0007528"],"synonyms":[{"name":"tuberculous empyema (& pleural)","type":"exact"}],"termid":"MONDO:0005999","xrefs":{"Monarch":{"xref_id":"0005999"}}}


id: MONDO:0859188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and brain abnormalities","secondary_identifiers":["MEDGEN:1794189","UMLS:C5561979","OMIM:619517"],"termid":"MONDO:0859188","xrefs":{"Monarch":{"xref_id":"0859188"}}}


id: PBO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC3 divergent transcript","termid":"PBO:0045208"}


id: GO:1901544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"positively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"activation of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"positive regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901544"}


id: MONDO:0024624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A degenerative disorder that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete atrophy of lacrimal gland (obsolete MONDO:0024624)","secondary_identifiers":["SCTID:91951001"],"synonyms":[{"name":"atrophy of lacrimal gland","type":"exact"},{"name":"degenerative disorder of lacrimal gland","type":"exact"},{"name":"lacrimal atrophy","type":"related"},{"name":"lacrimal gland degenerative disorder","type":"exact"}],"termid":"MONDO:0024624","xrefs":{"Monarch":{"xref_id":"0024624"}}}


id: PBO:0073941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member A3","termid":"PBO:0073941"}


id: FYPO:0005047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased.","definition_xrefs":["PomBase:mah","PMID:20605454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005047"}


id: GO:0035530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","PMID:19812544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 6 production","synonyms":[{"name":"CCL6 production","type":"exact"}],"termid":"GO:0035530"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: GO:0110010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell at the sides which interface adjacent cells and near the base.","definition_xrefs":["GOC:ha","PMID:27404358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"basolateral protein secretion","termid":"GO:0110010"}


id: GO:0048311
data:
  {"annotated_genes":["SJAG_02848","SJAG_02509","SJAG_04003","SJAG_00655","SJAG_01741"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111715],"is_not":false,"summary":null,"term":"GO:0048311"},{"annotations":[106981,78055,106766,78199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048312"},{"annotations":[102295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria between and within cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02509":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"distribution of mitochondria","type":"exact"},{"name":"mitochondrial distribution","type":"exact"},{"name":"positioning of mitochondria","type":"related"}],"termid":"GO:0048311","terms_by_termid":{"GO:0000001":null,"GO:0048311":null,"GO:0048312":null}}


id: MONDO:0850198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype that is not associated with activation of the WNT pathway or sonic hedgehog (SHH) pathway and TP53 mutations are absent.","definition_xrefs":["DOID:0080706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH","secondary_identifiers":["MEDGEN:1387799","NCIT:C129444","UMLS:C4330667"],"termid":"MONDO:0850198","xrefs":{"Monarch":{"xref_id":"0850198"}}}


id: MONDO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningiomas that affects both optic nerves.","definition_xrefs":["NCIT:C5304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve neoplasm","termid":"MONDO:0002640"},{"relation_name":"is_a","term_name":"optic tract meningioma","termid":"MONDO:0024648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral meningioma of optic nerve","secondary_identifiers":["MEDGEN:231442","DOID:6335","UMLS:C1332551"],"synonyms":[{"name":"bilateral meningioma of the optic nerve","type":"exact"},{"name":"bilateral optic nerve meningioma","type":"exact"}],"termid":"MONDO:0003859","xrefs":{"Monarch":{"xref_id":"0003859"}}}


id: GO:0120343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The radial spoke neck is a complex that connects the spoke stalk to the head.","definition_xrefs":["PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke neck","termid":"GO:0120343"}


id: GO:0034485
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107866],"is_not":false,"summary":null,"term":"GO:0034485"}]},"cv_name":"molecular_function","definition":"1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4,5-trisphosphate) + H2O = 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-3,4-bisphosphate) + phosphate.","definition_xrefs":["EC:3.1.3.86","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25528","MetaCyc:RXN-10036","Reactome:R-HSA-1675949"],"termid":"GO:0034485","terms_by_termid":{"GO:0034485":null}}


id: PBO:0052345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2B","termid":"PBO:0052345"}


id: GO:0022626
data:
  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ribosome located in the 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id: PBO:0031337
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id: PBO:0029684
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron_ion_starvation","termid":"PBO:0029684"}


id: PBO:0075055
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-18","termid":"PBO:0075055"}


id: GO:0140171
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + A = AH(2) + pyruvate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-lactate dehydrogenase activity","termid":"GO:0140171"}


id: GO:0047718
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indan-1-ol + NAD(P)+ = indanone + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.112","MetaCyc:INDANOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indanol dehydrogenase activity","synonyms":[{"name":"indan-1-ol:NAD(P)+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047718"}


id: MONDO:0021218
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the placenta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta neoplasm","secondary_identifiers":["NCIT:C4858","UMLS:C0524541","MEDGEN:105551"],"synonyms":[{"name":"neoplasm of placenta","type":"exact"},{"name":"neoplasm of the placenta","type":"exact"},{"name":"placenta neoplasm (disease)","type":"exact"},{"name":"placenta neoplasms","type":"exact"},{"name":"placenta tumor","type":"exact"},{"name":"placenta tumors","type":"exact"},{"name":"placenta tumour","type":"exact"},{"name":"placenta tumours","type":"exact"},{"name":"placental neoplasm","type":"exact"},{"name":"placental tumor","type":"exact"},{"name":"placental tumors","type":"exact"},{"name":"placental tumour","type":"exact"},{"name":"placental tumours","type":"exact"},{"name":"trophoblastic tumor placental site","type":"related"},{"name":"trophoblastic tumour placental site","type":"related"},{"name":"tumor of placenta","type":"exact"},{"name":"tumor of the placenta","type":"exact"},{"name":"tumour of placenta","type":"exact"},{"name":"tumour of the placenta","type":"exact"}],"termid":"MONDO:0021218","xrefs":{"Monarch":{"xref_id":"0021218"}}}


id: PBO:0050727
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: GO:0050319
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate + H+ = D-glycerate + CO2.","definition_xrefs":["EC:4.1.1.73","RHEA:13317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tartrate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01751","MetaCyc:TARTRATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"(R,R)-tartrate carboxy-lyase (D-glycerate-forming)","type":"related"},{"name":"(R,R)-tartrate carboxy-lyase activity","type":"related"}],"termid":"GO:0050319"}


id: PBO:0058928
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: GO:0140066
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The crotonylation of a lysine residue in a protein. Crotonyl is the univalent radical CH3-CH=CH-CO- derived from crotonic acid.","definition_xrefs":["Wikipedia:crotonyl","PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}


id: MONDO:0013392
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia in which the cause of the disease is a mutation in the ANO10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 10","secondary_identifiers":["OMIM:613728","GARD:17314","Orphanet:284289","MEDGEN:462348","DOID:0050999","UMLS:C3150998"],"synonyms":[{"name":"ANO10 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"SCAR10","type":"exact"},{"name":"adult-onset autosomal recessive cerebellar ataxia","type":"related"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in ANO10","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 10","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 10","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 10","type":"exact"}],"termid":"MONDO:0013392","xrefs":{"Monarch":{"xref_id":"0013392"}}}


id: PBO:0113044
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated negative regulator of RNA polymerase III assembly; differentially and dynamically occupies RNA polymerase III-transcribed genes; promotes eviction of RNAPIII; occupancy depends on TFIIIB and TFIIIC, not RNAPIII; protein abundance increases in response to DNA replication stress","termid":"PBO:0113044"}


id: PBO:0070792
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 22","termid":"PBO:0070792"}


id: GO:0009205
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id: MONDO:0002208
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulva adenocarcinoma (obsolete MONDO:0002208)","termid":"MONDO:0002208","xrefs":{"Monarch":{"xref_id":"0002208"}}}


id: PBO:0086992
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id: MONDO:0001751
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id: PBO:0003866
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Qcr1 (predicted)","termid":"PBO:0003866"}


id: PR:Q9USP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmn1 gene.","definition_xrefs":["UniProtKB:Q9USP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C902.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.04","synonyms":[{"name":"Spom972h-rmn1","type":"exact"}],"termid":"PR:Q9USP9"}


id: GO:1990712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least HFE and a transferrin receptor (either TFR1/TFRC or TFR2), proposed to play a role in the sensing of transferrin-bound Fe (Fe2-Tf) on the plasma membrane to regulate hepcidin transcription.","definition_xrefs":["PMID:25147378","GOC:kom","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HFE-transferrin receptor complex","termid":"GO:1990712"}


id: PBO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG1 antisense RNA 1","termid":"PBO:0051887"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: GO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the side chain of an N-terminal asparagine or glutamine residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from side chain","termid":"GO:0031364"}


id: PBO:0086600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is increased greatly during sporulation; YEL023C is not an essential gene","termid":"PBO:0086600"}


id: PBO:0012541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_acts_on_population_of","termid":"PBO:0012541"}


id: GO:0033792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a 3alpha-hydroxy bile acid CoA + NAD+ = a 3-oxo bile acid CoA + H+ + NADH.","definition_xrefs":["RHEA:55380","PMID:23836456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3alpha-hydroxy bile acid-CoA-ester 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.395"],"synonyms":[{"name":"7alpha-dehydroxylase activity","type":"related"},{"name":"bile acid 7-dehydroxylase activity","type":"related"},{"name":"bile-acid 7alpha-dehydroxylase activity","type":"related"},{"name":"cholate 7alpha-dehydroxylase activity","type":"related"}],"termid":"GO:0033792"}


id: PBO:0077386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126B","termid":"PBO:0077386"}


id: PBO:0048881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member G, pseudogene","termid":"PBO:0048881"}


id: GO:2000341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:0035926","GO:1904207"],"synonyms":[{"name":"chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"regulation of CCL2 secretion","type":"narrow"},{"name":"regulation of CXCL2 production","type":"exact"},{"name":"regulation of MIP-2 production","type":"exact"},{"name":"regulation of MIP2 production","type":"exact"},{"name":"regulation of SCYB2 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000341"}


id: MONDO:0958228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 122","secondary_identifiers":["OMIM:620714","UMLS:C5935576","MEDGEN:1853544"],"synonyms":[{"name":"deafness, autosomal recessive 122","type":"narrow"}],"termid":"MONDO:0958228","xrefs":{"Monarch":{"xref_id":"0958228"}}}


id: GO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to an oxygen (O) atom in a serine residue to form peptidyl-O-palmitoyl-L-serine.","definition_xrefs":["RESID:AA0080"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine palmitoylation (obsolete GO:0018221)","synonyms":[{"name":"peptidyl-serine O-palmitoylation","type":"exact"}],"termid":"GO:0018221"}


id: GO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061397)","termid":"GO:0061397"}


id: GO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"somatostatin secretion","termid":"GO:0070253"}


id: FYPO:0001439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloramphenicol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on chloramphenicol","synonyms":[{"name":"normal cell population growth in presence of chloramphenicol","type":"exact"},{"name":"normal cell population growth on chloramphenicol","type":"exact"},{"name":"normal cellular response to chloramphenicol","type":"related"},{"name":"normal vegetative cell population growth on chloramphenicol","type":"exact"}],"termid":"FYPO:0001439"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PBO:0076906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 264, ER-phagy receptor","termid":"PBO:0076906"}


id: MONDO:0010210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the XPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"xeroderma pigmentosum group A","secondary_identifiers":["GARD:5624","MEDGEN:82775","DOID:0110843","NCIT:C3965","SCTID:43477006","OMIM:278700","Orphanet:276249","UMLS:C0268135"],"synonyms":[{"name":"XP group A","type":"exact"},{"name":"XP, group A","type":"related"},{"name":"XP-A","type":"exact"},{"name":"XP1","type":"exact"},{"name":"XPA","type":"exact"},{"name":"XPA xeroderma pigmentosum","type":"exact"},{"name":"xeroderma pigmentosum 1","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in XPA","type":"exact"},{"name":"xeroderma pigmentosum complementation group A","type":"exact"},{"name":"xeroderma pigmentosum group A","type":"exact"},{"name":"xeroderma pigmentosum group type A","type":"exact"},{"name":"xeroderma pigmentosum, complementation group A","type":"related"},{"name":"xeroderma pigmentosum, complementation group type a","type":"exact"},{"name":"xeroderma pigmentosum, group A","type":"exact"},{"name":"xeroderma pigmentosum, type 1","type":"related"}],"termid":"MONDO:0010210","xrefs":{"Monarch":{"xref_id":"0010210"}}}


id: MONDO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the glottis.","direct_ancestors":[{"relation_name":"is_a","term_name":"glottis cancer","termid":"MONDO:0002351"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis carcinoma","secondary_identifiers":["MEDGEN:152820","UMLS:C0740083","NCIT:C4923","DOID:2599","SCTID:372103002"],"synonyms":[{"name":"cancer of glottis","type":"broad"},{"name":"cancer of the glottis","type":"broad"},{"name":"carcinoma of glottis","type":"exact"},{"name":"carcinoma of the glottis","type":"exact"},{"name":"glottic carcinoma","type":"exact"},{"name":"glottic throat cancer","type":"broad"},{"name":"glottis cancer","type":"broad"},{"name":"glottis carcinoma","type":"exact"}],"termid":"MONDO:0002355","xrefs":{"Monarch":{"xref_id":"0002355"}}}


id: GO:0018583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,3-diol + O2 = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O.","definition_xrefs":["EC:1.13.11.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biphenyl-2,3-diol 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN","RHEA:14413","UM-BBD_enzymeID:r0390"],"synonyms":[{"name":"2,3-dihydroxybiphenyl 1,2-dioxygenase activity","type":"broad"},{"name":"2,3-dihydroxybiphenyl dioxygenase activity","type":"broad"},{"name":"biphenyl-2,3-diol dioxygenase activity","type":"related"},{"name":"biphenyl-2,3-diol:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0018583"}


id: PBO:0072740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A5","termid":"PBO:0072740"}


id: MONDO:0010272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability type 10 (obsolete MONDO:0010272)","termid":"MONDO:0010272","xrefs":{"Monarch":{"xref_id":"0010272"}}}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25736836","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: GO:0031342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell killing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell killing","secondary_identifiers":["Reactome:R-HSA-9664433"],"synonyms":[{"name":"down regulation of cell killing","type":"exact"},{"name":"down-regulation of cell killing","type":"exact"},{"name":"downregulation of cell killing","type":"exact"},{"name":"inhibition of cell killing","type":"narrow"}],"termid":"GO:0031342"}


id: PBO:0064962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 14","termid":"PBO:0064962"}


id: MONDO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A microphthalmia that has material basis in variation in the chromosomal region 14q32.","definition_xrefs":["PMID:9545413","DOID:0060840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 1","secondary_identifiers":["OMIM:251600","MESH:C565377","UMLS:C1855052","MEDGEN:381546"],"synonyms":[{"name":"MCOP1","type":"exact"},{"name":"Mcop","type":"related"},{"name":"anophthalmia, clinical, isolated","type":"related"},{"name":"isolated microphthalmia type 1","type":"exact"},{"name":"microphthalmia, isolated 1","type":"related"},{"name":"microphthalmos, autosomal recessive","type":"related"}],"termid":"MONDO:0009631","xrefs":{"Monarch":{"xref_id":"0009631"}}}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: GO:1990607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether cytokinesis has correctly completed, is received and converted into a molecular signal, contributing to a cytokinesis after mitosis checkpoint.","definition_xrefs":["GOC:vw","PMID:1234","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cytokinesis after mitosis checkpoint (obsolete GO:1990607)","termid":"GO:1990607"}


id: PBO:0062739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 6","termid":"PBO:0062739"}


id: GO:0022028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the telencephalon from the subventricular zone to the olfactory bulb in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tangential migration from the subventricular zone to the olfactory bulb","synonyms":[{"name":"rostral migratory stream migration","type":"exact"}],"termid":"GO:0022028"}


id: GO:0008475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[collagen] + 2-oxoglutarate + O2 = (5R)-5-hydroxy-L-lysyl-[collagen] + succinate + CO2.","definition_xrefs":["RHEA:16569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"procollagen-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1981104","EC:1.14.11.4","MetaCyc:PROCOLLAGEN-LYSINE-5-DIOXYGENASE-RXN"],"synonyms":[{"name":"collagen lysine hydroxylase activity","type":"related"},{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"lysylprotocollagen dioxygenase activity","type":"related"},{"name":"procollagen-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase activity","type":"related"},{"name":"protocollagen lysine dioxygenase activity","type":"related"},{"name":"protocollagen lysine hydroxylase activity","type":"related"},{"name":"protocollagen lysyl hydroxylase activity","type":"related"}],"termid":"GO:0008475"}


id: MONDO:0011996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic myeloproliferative neoplasm characterized by the expression of the BCR-ABL1 fusion gene. It presents with neutrophilic leukocytosis. It can appear at any age, but it mostly affects middle aged and older individuals. Patients usually present with fatigue, weight loss, anemia, night sweats, and splenomegaly. If untreated, it follows a biphasic or triphasic natural course; an initial indolent chronic phase which is followed by an accelerated phase, a blast phase, or both. Allogeneic stem cell transplantation and tyrosine kinase inhibitors delay disease progression and prolong overall survival.","definition_xrefs":["NCIT:C3174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukemia","termid":"MONDO:0004643"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"chronic myelogenous leukemia, BCR-ABL1 positive","secondary_identifiers":["ICD9:205.1","NANDO:2200013","Orphanet:521","NCIT:C3177","OMIM:608232","MEDGEN:75993","DOID:0081088","GARD:6105","DOID:8552","ONCOTREE:CML","EFO:0000339","ICDO:9875/3","MedDRA:10009013","UMLS:C0279543","ICDO:9863/3"],"synonyms":[{"name":"BCR-ABL Positive chronic myelogenous leukaemia","type":"exact"},{"name":"BCR-ABL Positive chronic myelogenous leukemia","type":"exact"},{"name":"CML","type":"exact"},{"name":"CML - chronic myelogenous leukaemia","type":"exact"},{"name":"CML - chronic myelogenous leukemia","type":"exact"},{"name":"chronic granulocytic leukaemia","type":"exact"},{"name":"chronic granulocytic leukemia","type":"exact"},{"name":"chronic myelocytic leukaemia","type":"exact"},{"name":"chronic myelocytic leukemia","type":"exact"},{"name":"chronic myelogenous leukaemia","type":"exact"},{"name":"chronic myelogenous leukaemia (CML)","type":"exact"},{"name":"chronic myelogenous leukemia","type":"exact"},{"name":"chronic myelogenous leukemia (CML)","type":"exact"},{"name":"chronic myelogenous leukemia, BCR-ABL1 Positive","type":"exact"},{"name":"chronic myelogenous leukemias","type":"exact"},{"name":"chronic myeloid leukaemia","type":"exact"},{"name":"chronic myeloid leukemia","type":"exact"},{"name":"hematopoeitic - chronic myelocytic leukaemia (CML)","type":"exact"},{"name":"hematopoeitic - chronic myelocytic leukemia (CML)","type":"exact"},{"name":"leukemia, Philadelphia chromosome-positive, resistant to imatinib, Somatic mutation","type":"exact"},{"name":"leukemia, chronic myelogenous","type":"related"},{"name":"leukemia, chronic myeloid","type":"related"},{"name":"leukemia, chronic myeloid, Philadelphia chromosome positive, somatic","type":"exact"},{"name":"leukemia, chronic myeloid, atypical","type":"related"},{"name":"myeloid leukemia, chronic","type":"exact"}],"termid":"MONDO:0011996","xrefs":{"Monarch":{"xref_id":"0011996"}}}


id: PBO:0084153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: GO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + tauropine = H+ + NADH + pyruvate + taurine.","definition_xrefs":["EC:1.5.1.23","RHEA:12580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tauropine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01683","MetaCyc:TAUROPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"},{"name":"N2-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"}],"termid":"GO:0050325"}


id: PBO:0027996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_G2_phase","termid":"PBO:0027996"}


id: MONDO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked mental retardation, Schimke type, is characterized by intellectual deficit, growth retardation with short stature, deafness and ophthalmoplegia. Choreoathetosis with muscle spasticity generally appears during childhood. It has been described in four boys, three of whom were from the same family. Transmission is X-linked.","definition_xrefs":["Orphanet:85285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Schimke type","secondary_identifiers":["MESH:C536630","GARD:9288","MEDGEN:374193","SCTID:719010001","UMLS:C1839320","OMIM:312840"],"synonyms":[{"name":"Schimke X-linked intellectual disability syndrome","type":"related"},{"name":"Schimke X-linked mental retardation syndrome","type":"related"},{"name":"childhood-onset choreoathetosis with spasticity, postnatal microcephaly, growth and intellectual disability, ophthalmoplegia, and deafness","type":"related"},{"name":"childhood-onset choreoathetosis with spasticity, postnatal microcephaly, growth and mental retardation, ophthalmoplegia, and deafness","type":"related"},{"name":"choreoathetosis with intellectual disability X- linked","type":"related"},{"name":"choreoathetosis with intellectual disability, X-linked","type":"related"},{"name":"choreoathetosis with mental retardation X- linked","type":"related"},{"name":"choreoathetosis with mental retardation, X-linked","type":"related"},{"name":"progressive basal ganglion dysfunction, mental and growth retardation, external ophthalmoplegia, postnatal microcephaly and deafness","type":"related"}],"termid":"MONDO:0010729","xrefs":{"Monarch":{"xref_id":"0010729"}}}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: PBO:0017981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2 (predicted)","termid":"PBO:0017981"}


id: PBO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 25","termid":"PBO:0071693"}


id: PBO:0069946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1239, pseudogene","termid":"PBO:0069946"}


id: FYPO:0006809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which shortening of the poly(A) tail of a messenger RNA (mRNA) molecule is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"},{"relation_name":"is_a","term_name":"abnormal deadenylation-dependent decay","termid":"FYPO:0006808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening","synonyms":[{"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening during mitotic cell cycle","type":"related"},{"name":"decreased nuclear-transcribed mRNA poly(A) tail shortening during vegetative growth","type":"exact"},{"name":"reduced nuclear-transcribed mRNA poly(A) tail shortening","type":"exact"}],"termid":"FYPO:0006809"}


id: MONDO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 5","secondary_identifiers":["DOID:0080761","OMIM:618913","GARD:16392","MEDGEN:1711127","UMLS:C5394473"],"synonyms":[{"name":"FANCONI RENOTUBULAR SYNDROME 5","type":"exact"},{"name":"FRTS5","type":"exact"},{"name":"Fanconi Renotubular Syndrome, Acadian Variant","type":"exact"},{"name":"Fanconi renotubular syndrome 5","type":"exact"}],"termid":"MONDO:0030056","xrefs":{"Monarch":{"xref_id":"0030056"}}}


id: FYPO:0007707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a GTPase activator is decreased.","definition_xrefs":["PomBase:mah","PMID:30279276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased GTPase activator activity","synonyms":[{"name":"decreased GAP activity","type":"exact"},{"name":"reduced GTPase activator activity","type":"exact"}],"termid":"FYPO:0007707"}


id: PBO:0026757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_septated_cell_with_condensed_chromatin","termid":"PBO:0026757"}


id: GO:0032832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032829"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032832"}


id: PBO:0078586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM59-IFT80 readthrough (NMD candidate)","termid":"PBO:0078586"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: PR:O74509
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vsl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.06c","synonyms":[{"name":"Spom972h-vsl1","type":"exact"}],"termid":"PR:O74509"}


id: MONDO:0008067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 2","secondary_identifiers":["MEDGEN:413336","OMIM:161550","UMLS:C2750548"],"synonyms":[{"name":"NPCA2","type":"related"},{"name":"Npca2","type":"related"},{"name":"nasopharyngeal carcinoma, susceptibility to, 2","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0008067","xrefs":{"Monarch":{"xref_id":"0008067"}}}


id: PBO:0078642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase 1","termid":"PBO:0078642"}


id: PBO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 7, Pre10 (predicted)","termid":"PBO:0005354"}


id: PBO:0029275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0029275"}


id: PBO:0057368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-2","termid":"PBO:0057368"}


id: PBO:0003970
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mental retardation","termid":"PBO:0003970"}


id: MONDO:1012377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal parakeratosis, non-human animal","termid":"MONDO:1011752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal parakeratosis, dog","secondary_identifiers":["OMIA:001373-9615"],"termid":"MONDO:1012377","xrefs":{"Monarch":{"xref_id":"1012377"}}}


id: PBO:0077731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 3","termid":"PBO:0077731"}


id: PBO:0004325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA hairpin binding protein (predicted)","termid":"PBO:0004325"}


id: MONDO:0011245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"KID syndrome","termid":"MONDO:0018781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, hystrix-like, with hearing loss","secondary_identifiers":["UMLS:C1865234","MEDGEN:355410","MESH:C566528","OMIM:602540","GARD:15349"],"synonyms":[{"name":"HID syndrome","type":"related"},{"name":"hystrix-like ichthyosis with deafness","type":"exact"},{"name":"ichthyosis, hystrix-like, with deafness","type":"narrow"}],"termid":"MONDO:0011245","xrefs":{"Monarch":{"xref_id":"0011245"}}}


id: GO:0032287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature peripheral nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"myelination in peripheral nervous system","termid":"GO:0022011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"peripheral nervous system myelin maintenance","synonyms":[{"name":"myelin maintenance in peripheral nervous system","type":"exact"},{"name":"peripheral nervous system myelin sheath maintenance","type":"exact"}],"termid":"GO:0032287"}


id: GO:0009783
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The antenna complex of photosystem II. A photosystem has two closely linked components, an antenna containing light-absorbing pigments and a reaction center. Each antenna contains one or more light-harvesting complexes (LHCs).","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem II","termid":"GO:0009523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem II antenna complex","termid":"GO:0009783"}


id: FYPO:0006716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which chromosomes segregate equally (i.e. normally), but the nuclear envelope is not distributed equally between daughter nuclei. As a result, the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal nuclear envelope distribution","synonyms":[{"name":"large and small daughter nuclei, with unequal nuclear envelope and equal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during vegetative growth","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope partitioning","type":"exact"}],"termid":"FYPO:0006716"}


id: MONDO:0030899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 8","secondary_identifiers":["Orphanet:597733","MEDGEN:1754121","UMLS:C5436929","GARD:18017","OMIM:619165"],"synonyms":[{"name":"OCA8","type":"exact"},{"name":"oculocutaneous albinism, type 8","type":"exact"},{"name":"oculocutaneous albinism, type VIII","type":"exact"}],"termid":"MONDO:0030899","xrefs":{"Monarch":{"xref_id":"0030899"}}}


id: PBO:0073713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1","termid":"PBO:0073713"}


id: FYPO:0003521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular L-ergothioneine level","synonyms":[{"name":"decreased L-ergothioneine level","type":"exact"},{"name":"decreased cellular L-ergothioneine accumulation","type":"related"},{"name":"reduced cellular L-ergothioneine level","type":"exact"}],"termid":"FYPO:0003521"}


id: MONDO:0015715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hemophilia B is a form of hemophilia B characterized by a large deficiency of factor IX leading to frequent spontaneous hemorrhage and abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"severe hemophilia B","secondary_identifiers":["MEDGEN:1826004","UMLS:C5679576","GARD:17056"],"synonyms":[{"name":"severe factor IX deficiency","type":"exact"},{"name":"severe haemophilia type B","type":"exact"},{"name":"severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015715","xrefs":{"Monarch":{"xref_id":"0015715"}}}


id: GO:0120194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["PMID:30911018","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anther dehiscence","termid":"GO:0120194"}


id: PR:O43018
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC354.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C354.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.04","synonyms":[{"name":"Spom972h-SPBC354.04","type":"exact"}],"termid":"PR:O43018"}


id: PBO:0038456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis antagonizing transcription factor","termid":"PBO:0038456"}


id: MONDO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 2","secondary_identifiers":["GARD:15496","MESH:C565186","UMLS:C1853104","MEDGEN:343971","OMIM:610753"],"synonyms":[{"name":"AA2","type":"exact"},{"name":"alopecia areata 2","type":"exact"}],"termid":"MONDO:0012551","xrefs":{"Monarch":{"xref_id":"0012551"}}}


id: GO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an acetyl group or groups from an acetylated sterol.","definition_xrefs":["PMID:18034159","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"steryl deacetylase activity","synonyms":[{"name":"sterol deacetylase activity","type":"exact"},{"name":"steryl acetyl hydrolase activity","type":"exact"}],"termid":"GO:0034084"}


id: GO:0075172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of MAP kinase-mediated signal transduction in response to host (obsolete GO:0075172)","synonyms":[{"name":"positive regulation of symbiont MAP kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075172"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:25156118","PMID:23991286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: GO:1990943
data:
  {"annotated_genes":["SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92829],"is_not":false,"summary":null,"term":"GO:1990943"}]},"cv_name":"molecular_function","definition":"Binding to the replication fork barrier found in the mating type region of fission yeast.","definition_xrefs":["PMID:18723894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork barrier binding","termid":"GO:0031634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"mating type region replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RTS1 barrier binding","type":"exact"},{"name":"RTS1 element binding","type":"exact"}],"termid":"GO:1990943","terms_by_termid":{"GO:1990943":null}}


id: PBO:0058654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6782","termid":"PBO:0058654"}


id: PBO:0082483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-binding mu subunit of AP-2; AP-2 is a heterotetrameric endocytic cargo-binding adaptor that facilitates uptake of membrane proteins during clathrin-mediated endocytosis; Apm4p is required for AP-2 function and localization, and binds cell wall stress receptor Mid2p; AP-2 is required for cell polarity responses to pheromone, nutritional status and cell wall damage in S. cerevisiae, and for hyphal growth in C. albicans; AP-2 complex is conserved in mammals","termid":"PBO:0082483"}


id: MONDO:0012921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the CCR5 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 22","secondary_identifiers":["UMLS:C2675864","MESH:C567284","MEDGEN:390900","OMIM:612522","DOID:0110759"],"synonyms":[{"name":"CCR5 type 1 diabetes mellitus","type":"exact"},{"name":"IDDM22","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 22","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 22","type":"exact"},{"name":"insulin-dependent diabetes mellitus 22","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in CCR5","type":"exact"}],"termid":"MONDO:0012921","xrefs":{"Monarch":{"xref_id":"0012921"}}}


id: GO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.","definition_xrefs":["EC:2.3.1.160","RHEA:24016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"vinorine synthase activity","secondary_identifiers":["MetaCyc:2.3.1.160-RXN","KEGG_REACTION:R05876"],"synonyms":[{"name":"acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050636"}


id: PBO:0067631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 803, pseudogene","termid":"PBO:0067631"}


id: GO:0042883
data:
  {"annotated_genes":["SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"}]},"cv_name":"biological_process","definition":"The directed movement of cysteine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cysteine transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"L-cysteine transport","type":"narrow"}],"termid":"GO:0042883","terms_by_termid":{"GO:1903712":null}}


id: PBO:0067162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 215, pseudogene","termid":"PBO:0067162"}


id: MONDO:0012804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the CSRP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 12","secondary_identifiers":["OMIM:612124","DOID:0110318","UMLS:C2677491","MEDGEN:393755"],"synonyms":[{"name":"CMH12","type":"exact"},{"name":"CSRP3 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 12","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 12","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 12","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 12","type":"exact"},{"name":"hypertrophic cardiomyopathy 12","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in CSRP3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 12","type":"exact"}],"termid":"MONDO:0012804","xrefs":{"Monarch":{"xref_id":"0012804"}}}


id: PBO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP4A22 antisense RNA 1","termid":"PBO:0044431"}


id: PBO:0084570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in zinc ion homeostasis; member of the four-protein IZH family, expression induced by zinc deficiency; deletion reduces sensitivity to elevated zinc and shortens lag phase, overexpression reduces Zap1p activity","termid":"PBO:0084570"}


id: FYPO:0002630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the outer surface of the fungal-type cell wall is rougher and less regular than normal.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002946","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"irregular cell wall during vegetative growth","synonyms":[{"name":"irregular cell wall during mitotic cell cycle","type":"related"},{"name":"irregular cell wall surface texture during vegetative growth","type":"exact"},{"name":"rough cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002630"}


id: PBO:0047154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 183 member E, pseudogene","termid":"PBO:0047154"}


id: PBO:0039963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 6","termid":"PBO:0039963"}


id: PBO:0057222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378j","termid":"PBO:0057222"}


id: PATO:0005006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's being morphologically distinguishable from another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiated from","synonyms":[{"name":"distinct from","type":"exact"}],"termid":"PATO:0005006"}


id: FYPO:0002204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that each contain one or more septa, and in which the cell diameter is larger than normal and the cell length is shorter than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, stubby septated cells (obsolete FYPO:0002204)","synonyms":[{"name":"inviable microcolony, stubby septated vegetative cells","type":"exact"}],"termid":"FYPO:0002204"}


id: MONDO:0100262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0006025","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX5 defect","synonyms":[{"name":"PEX5 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX5 defect","type":"exact"}],"termid":"MONDO:0100262","xrefs":{"Monarch":{"xref_id":"0100262"}}}


id: PBO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_actin_filaments","termid":"PBO:0030016"}


id: GO:0140250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse.","definition_xrefs":["PMID:23083742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}


id: PBO:0048090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 11","termid":"PBO:0048090"}


id: GO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl glycine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0241"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine thiazolecarboxylic acid (obsolete GO:0018137)","termid":"GO:0018137"}


id: PBO:0051077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-19","termid":"PBO:0051077"}


id: PBO:0039827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 1","termid":"PBO:0039827"}


id: MONDO:0016013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foetal methylmercury syndrome is characterized by a group of symptoms that may be observed in a fetus or newborn when the mother was exposed during pregnancy to excessive amounts of methylmercury.","definition_xrefs":["Orphanet:1917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal methylmercury syndrome","secondary_identifiers":["icd11.foundation:1975519045","GARD:3575","MEDGEN:82710","MESH:D020262","ICD9:759.89","UMLS:C0265376","SCTID:62110005"],"synonyms":[{"name":"Methyl mercury antenatal exposure","type":"related"},{"name":"Methyl mercury antenatal infection","type":"exact"},{"name":"Minamata disease","type":"related"}],"termid":"MONDO:0016013","xrefs":{"Monarch":{"xref_id":"0016013"}}}


id: GO:0000923
data:
  {"annotated_genes":["SJAG_02609","SJAG_00856","SJAG_02737","SJAG_02886","SJAG_02761","SJAG_07018","SJAG_03835","SJAG_03052","SJAG_01215","SJAG_01756","SJAG_03073","SJAG_03264"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99597,99883,100499,100949,101845,105995,108407,109167,110149,112351,116542,116795],"is_not":false,"summary":null,"term":"GO:0000923"}]},"cv_name":"cellular_component","definition":"A microtubule organizing center formed by a band of gamma-tubulin that is recruited to a circumferential band of F-actin at the midpoint of a cell and which nucleates microtubules from the cell division site at the end of mitosis.","definition_xrefs":["PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"equatorial microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EMTOC","type":"exact"},{"name":"equatorial microtubule organising centre","type":"exact"}],"termid":"GO:0000923","terms_by_termid":{"GO:0000923":null}}


id: PBO:0073331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7","termid":"PBO:0073331"}


id: GO:0033615
data:
  {"annotated_genes":["SJAG_01503","SJAG_07008","SJAG_04899","SJAG_04450","SJAG_01838","SJAG_06135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75267,75856,79995,88506,109297,109716],"is_not":false,"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the mitochondrial inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033615","terms_by_termid":{"GO:0033615":null}}


id: PBO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule","termid":"PBO:0034581"}


id: PBO:0017917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transport protein, tspO homolog (predicted)","termid":"PBO:0017917"}


id: PBO:0113079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression; involved in cell wall assembly; plays role in lager yeast flocculation under brewing conditions; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC","termid":"PBO:0113079"}


id: GO:0015435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type efflux permease activity (obsolete GO:0015435)","synonyms":[{"name":"ABC-type efflux permease activity","type":"exact"}],"termid":"GO:0015435"}


id: PBO:0041338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 22","termid":"PBO:0041338"}


id: PR:O14220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu26 gene.","definition_xrefs":["UniProtKB:O14220","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.16","synonyms":[{"name":"Spom972h-meu26","type":"exact"}],"termid":"PR:O14220"}


id: PBO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human SLC35A2","termid":"PBO:0017080"}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: PBO:0051857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 3","termid":"PBO:0051857"}


id: GO:0006845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of aspartate and glutamate into, out of or within a mitochondrion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial aspartate/glutamate transport (obsolete GO:0006845)","synonyms":[{"name":"mitochondrial aspartate/glutamate transport","type":"exact"}],"termid":"GO:0006845"}


id: PBO:0088494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha amylase","termid":"PBO:0088494"}


id: PATO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001118 momentum value (obsolete PATO:0001118)","termid":"PATO:0001118"}


id: PBO:0059671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 37","termid":"PBO:0059671"}


id: PBO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_start_sequence_of","termid":"PBO:0034059"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PR:O13745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.11c","synonyms":[{"name":"RNA polymerase II transcription factor B 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p73 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfb1","type":"exact"}],"termid":"PR:O13745"}


id: GO:0015654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tellurite from one side of a membrane to the other. Tellurite is a salt of tellurous acid or an oxide of tellurium which occurs sparingly in tufts of white or yellowish crystals.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"tellurite transmembrane transporter activity","secondary_identifiers":["GO:0015118"],"synonyms":[{"name":"tellurite uptake transmembrane transporter activity","type":"related"},{"name":"tellurite-resistance uptake permease activity","type":"related"},{"name":"tellurite-resistance uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015654"}


id: GO:0005049
data:
  {"annotated_genes":["SJAG_01358","SJAG_02661","SJAG_01534","SJAG_04366","SJAG_03693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73331,77891,78188,113127,116874],"is_not":false,"summary":null,"term":"GO:0005049"}]},"cv_name":"molecular_function","definition":"Combining with a nuclear export signal (NES) on a cargo to be transported, to mediate transport of a the cargo through the nuclear pore, from the nuclear lumen to the cytoplasm. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:vw","GOC:mah","PMID:11743003","GOC:bf","PMID:25802992","PMID:28713609","GOC:pg","Wikipedia:Nuclear_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic carrier activity","termid":"GO:0140142"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01358":null,"SJAG_01534":null,"SJAG_02661":null,"SJAG_03693":null,"SJAG_04366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140142"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140142"],"is_obsolete":false,"name":"nuclear export signal receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008262","Reactome:R-HSA-178215"],"synonyms":[{"name":"NES receptor","type":"exact"},{"name":"exportin activity","type":"related"},{"name":"importin-alpha binding","type":"related"},{"name":"importin-alpha export receptor activity","type":"narrow"}],"termid":"GO:0005049","terms_by_termid":{"GO:0005049":null}}


id: GO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + methylphosphonate = alpha-D-ribose 1-methylphosphonate 5-triphosphate + adenine.","definition_xrefs":["EC:2.7.8.37","PMID:22089136","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN0-6732","RHEA:34679"],"termid":"GO:0061693"}


id: PBO:0061035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 1","termid":"PBO:0061035"}


id: PBO:0076540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR adaptor interacting with endolysosomal SLC15A4","termid":"PBO:0076540"}


id: GO:0099143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The actin cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton","termid":"GO:0099143"}


id: PBO:0029743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_cell","termid":"PBO:0029743"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: _global:results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","secondary_identifiers":["RO:0002356","GOREL:0001021"],"termid":"_global:results_in_specification_of"}


id: PBO:0051125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-3 (pseudogene)","termid":"PBO:0051125"}


id: GO:0032356
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032357"}]},"cv_name":"molecular_function","definition":"Binding to a DNA region containing an oxidized residue.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"oxidized DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidised DNA binding","type":"exact"}],"termid":"GO:0032356","terms_by_termid":{"GO:0032357":null}}


id: GO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form to form 2-amino-3-oxobutanoate, which is subsequently converted to glycine.","definition_xrefs":["MetaCyc:THREONINE-DEG2-PWY","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"L-threonine catabolic process","termid":"GO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-threonine catabolic process to glycine","secondary_identifiers":["Reactome:R-HSA-8849175"],"synonyms":[{"name":"L-threonine breakdown to glycine","type":"exact"},{"name":"L-threonine catabolic process to pyruvate","type":"related"},{"name":"L-threonine catabolism to glycine","type":"exact"},{"name":"L-threonine degradation to glycine","type":"exact"},{"name":"threonine catabolic process to glycine","type":"broad"}],"termid":"GO:0019518"}


id: PBO:0066809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 108","termid":"PBO:0066809"}


id: PBO:0042604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 4","termid":"PBO:0042604"}


id: PBO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF antisense RNA 1","termid":"PBO:0048517"}


id: PBO:0005368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Psy1","termid":"PBO:0005368"}


id: PBO:0059751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 25","termid":"PBO:0059751"}


id: PBO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 2","termid":"PBO:0046406"}


id: PBO:0081879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 826, pseudogene","termid":"PBO:0081879"}


id: MONDO:1010526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, dog","secondary_identifiers":["OMIA:000197-9615"],"termid":"MONDO:1010526","xrefs":{"Monarch":{"xref_id":"1010526"}}}


id: FYPO:0005873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased secondary cell septum thickness","synonyms":[{"name":"increased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"increased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"increased secondary septum thickness","type":"exact"},{"name":"thick secondary septum","type":"exact"}],"termid":"FYPO:0005873"}


id: PBO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 2","termid":"PBO:0051840"}


id: FYPO:0000923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal isocitrate dehydrogenase (NAD+) activity","termid":"FYPO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"increased NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000923"}


id: PBO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp5 and klp6 enter the nucleus separately","termid":"PBO:0003233"}


id: PR:Q9P7D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.16c gene.","definition_xrefs":["UniProtKB:Q9P7D3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHI2-like protein P4H10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.16c","synonyms":[{"name":"Spom972h-SPBP4H10.16c","type":"exact"}],"termid":"PR:Q9P7D3"}


id: PBO:0065227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR7 antisense RNA 1","termid":"PBO:0065227"}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["RHEA:17157","EC:2.7.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["MetaCyc:CREATINE-KINASE-RXN","Reactome:R-HSA-200318","Reactome:R-HSA-200326","KEGG_REACTION:R01881"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: MOD:01723
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01723"}


id: MOD:00640
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-N-biotinylaminohexyl isopropyl phosphorofluoridate","synonyms":[{"name":"6-N-biotinylaminohexyl isopropyl phosphate","type":"related"},{"name":"Can-FP-biotin","type":"related"}],"termid":"MOD:00640"}


id: PR:P87014
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-S-isoprenylcysteine O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12714:SF0","OMA:SCHPO00496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S-isoprenylcysteine O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.12c","secondary_identifiers":["UniProtKB:P87014"],"synonyms":[{"name":"PPMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ICMT","type":"exact"},{"name":"isoprenylcysteine carboxylmethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pcCMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylated protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prenylcysteine carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87014"}


id: GO:0032398
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class Ib protein complex","termid":"GO:0032398"}


id: PBO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyltransferase (predicted)","termid":"PBO:0001400"}


id: PBO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 5","termid":"PBO:0048663"}


id: PBO:0072880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS pseudogene 1","termid":"PBO:0072880"}


id: PBO:0029739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_nitrogen_starvation","termid":"PBO:0029739"}


id: PBO:0031394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_arginine","termid":"PBO:0031394"}


id: PBO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0001766"}


id: PBO:0074471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin","termid":"PBO:0074471"}


id: MONDO:0006171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival melanoma (obsolete MONDO:0006171)","termid":"MONDO:0006171","xrefs":{"Monarch":{"xref_id":"0006171"}}}


id: GO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pertechnetate ion + 3/2 H2 = technetium (IV) oxide + H2O + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete technetium (VII) reductase activity (obsolete GO:0034558)","termid":"GO:0034558"}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-199206","Reactome:R-HSA-199219","Reactome:R-HSA-429581"],"termid":"GO:0008523"}


id: GO:0035422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in innate immune response (obsolete GO:0035422)","termid":"GO:0035422"}


id: PBO:0073168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted and transmembrane 1","termid":"PBO:0073168"}


id: PBO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human C9orf64","termid":"PBO:0016057"}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: FYPO:0000331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone acetylation during vegetative growth","synonyms":[{"name":"decreased histone acetylation during mitotic cell cycle","type":"related"},{"name":"reduced histone acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000331"}


id: PBO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 24","termid":"PBO:0071559"}


id: GO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in parturition","termid":"GO:0060137"}


id: PATO:0000616
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's lacking symmetry.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrical","synonyms":[{"name":"asymmetric","type":"exact"},{"name":"asymmetry","type":"exact"}],"termid":"PATO:0000616"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: FYPO:0001991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that dies without completing cell division.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division","synonyms":[{"name":"inviable after spore germination, no cell division","type":"exact"},{"name":"inviable following spore germination, without cell division","type":"exact"},{"name":"inviable germinated spore, without cell division","type":"exact"},{"name":"lethal after spore germination, without cell division","type":"exact"}],"termid":"FYPO:0001991"}


id: PBO:0065294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 1","termid":"PBO:0065294"}


id: PBO:0066544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 8","termid":"PBO:0066544"}


id: MONDO:0014414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"},{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"STAT3-related early-onset multisystem autoimmune disease","secondary_identifiers":["NCIT:C157123","MEDGEN:863232","Orphanet:438159","UMLS:C4014795","GARD:17737","OMIM:615952"],"synonyms":[{"name":"ADMIO","type":"related"},{"name":"ADMIO1","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset, 1","type":"related"}],"termid":"MONDO:0014414","xrefs":{"Monarch":{"xref_id":"0014414"}}}


id: PATO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000824 water taste (obsolete PATO:0000824)","termid":"PATO:0000824"}


id: GO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090101"}


id: PBO:0085218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase subunit; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization; Palmitoyltransferase is composed of Shr5p and Erf2","termid":"PBO:0085218"}


id: PBO:0065615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A2 pseudogene 1","termid":"PBO:0065615"}


id: GO:0080014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thalianol = a thalian-diol. This reaction is the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create a thalian-diol ((13R,14R,17E)-podioda-8,17,21-trien-3beta,X-diol), where the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol, indicated by the X.","definition_xrefs":["MetaCyc:RXN-9631","PMID:18356490","PMID:17474751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thalianol hydroxylase activity","termid":"GO:0080014"}


id: MONDO:0008037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelinated optic nerve fibers","secondary_identifiers":["OMIM:159500","UMLS:C1834600","MEDGEN:320388"],"synonyms":[{"name":"myelinated optic nerve fibers","type":"exact"}],"termid":"MONDO:0008037","xrefs":{"Monarch":{"xref_id":"0008037"}}}


id: PBO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine) methyltransferase (predicted)","termid":"PBO:0002007"}


id: PBO:0076907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin","termid":"PBO:0076907"}


id: PBO:0028556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_import_into_nucleus","termid":"PBO:0028556"}


id: PR:O14450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21431:SF0","PRO:DNx","OMA:SCHPO01436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.13","secondary_identifiers":["UniProtKB:O14450"],"synonyms":[{"name":"Spom972h-PFDN6","type":"exact"}],"termid":"PR:O14450"}


id: PBO:0067929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 231","termid":"PBO:0067929"}


id: GO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of blood vessels, especially arteries, due to constriction of smooth muscle cells that line the vessels, and usually causing an increase in blood pressure.","definition_xrefs":["ISBN:0192800752","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction","secondary_identifiers":["GO:0045908","Wikipedia:Vasoconstriction"],"synonyms":[{"name":"negative regulation of blood vessel size","type":"exact"}],"termid":"GO:0042310"}


id: GO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior cibarial plate over time, from their formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate development","termid":"GO:0048722"}


id: PBO:0088946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific disordered protein","termid":"PBO:0088946"}


id: PBO:0049307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 2","termid":"PBO:0049307"}


id: PBO:0070317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 6","termid":"PBO:0070317"}


id: MONDO:0957955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 114, folate-responsive","secondary_identifiers":["UMLS:C5882719","MEDGEN:1848890","OMIM:620603"],"termid":"MONDO:0957955","xrefs":{"Monarch":{"xref_id":"0957955"}}}


id: PBO:0082896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin for the Sgv1p (Bur1p) protein kinase; subunit of the CDK-cyclin BUR kinase complex with Sgv1p (Bur2p); regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; involved in the recruitment of Spt6p to the CTD at the onset of transcription; regulates telomere elongation","termid":"PBO:0082896"}


id: PBO:0017634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit TPR lobe accessory factor Hcn1/Apc12","termid":"PBO:0017634"}


id: PBO:0053767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1012","termid":"PBO:0053767"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: GO:0042901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arabinan, a polysaccharide composed of arabinose residues, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arabinan transmembrane transporter activity","termid":"GO:0042901"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: PBO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 28","termid":"PBO:0071026"}


id: GO:0032301
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71580,74374],"is_not":false,"summary":null,"term":"GO:0032301"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6.","definition_xrefs":["PMID:11005803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MutSalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MMR complex","type":"broad"},{"name":"MSH2/MSH6 complex","type":"exact"}],"termid":"GO:0032301","terms_by_termid":{"GO:0032301":null}}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["MetaCyc:CARBAMATE-KINASE-RXN","RHEA:10152"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: GO:1905380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:bhm","PMID:10022900","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905380"}


id: PBO:0091149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38","termid":"PBO:0091149"}


id: MONDO:1012418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal furunculosis, non-human animal","termid":"MONDO:1011665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal furunculosis, dog","secondary_identifiers":["OMIA:001589-9615"],"termid":"MONDO:1012418","xrefs":{"Monarch":{"xref_id":"1012418"}}}


id: GO:1901777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mitomycin C.","definition_xrefs":["PMID:10099135","UniPathway:UPA00851","PMID:10094699","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mitomycin C biosynthetic process","synonyms":[{"name":"mitomycin C anabolism","type":"exact"},{"name":"mitomycin C biosynthesis","type":"exact"},{"name":"mitomycin C formation","type":"exact"},{"name":"mitomycin C synthesis","type":"exact"}],"termid":"GO:1901777"}


id: MONDO:0018640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary vasculitis","secondary_identifiers":["GARD:21863","MEDGEN:1842960","Orphanet:445197","UMLS:C5681200"],"termid":"MONDO:0018640","xrefs":{"Monarch":{"xref_id":"0018640"}}}


id: GO:0006901
data:
  {"annotated_genes":["SJAG_00906","SJAG_04391","SJAG_04615","SJAG_03268","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95013],"is_not":false,"summary":null,"term":"GO:0006901"},{"annotations":[73019,117352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"},{"annotations":[78111,73227],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"vesicle budding from membrane","termid":"GO:0006900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_03268":null,"SJAG_04391":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle coating","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat assembly","type":"broad"}],"termid":"GO:0006901","terms_by_termid":{"GO:0003400":null,"GO:0006901":null,"GO:0048205":null}}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57897],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-S(8)-aminomethyldihydrolipoyl]-L-lysyl-[protein] + (6S)-5,6,7,8-tetrahydrofolate = N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NH4+.","definition_xrefs":["RHEA:16945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-5693977","MetaCyc:GCVT-RXN","EC:2.1.2.10"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: PBO:0062925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y12","termid":"PBO:0062925"}


id: PBO:0074984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-26","termid":"PBO:0074984"}


id: GO:1903461
data:
  {"annotated_genes":["SJAG_05232","SJAG_02199","SJAG_00198","SJAG_02690","SJAG_02294","SJAG_00618","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73919,92128,94550,100131,100165,101029,103683],"is_not":false,"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"Any DNA replication, Okazaki fragment processing that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:1234","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, Okazaki fragment processing","termid":"GO:0033567"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"Okazaki fragment processing involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, Okazaki fragment processing involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903461","terms_by_termid":{"GO:1903461":null}}


id: PBO:0004889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of MBF","termid":"PBO:0004889"}


id: GO:0032240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleobase-containing compound transport","synonyms":[{"name":"down regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"downregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"inhibition of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"narrow"},{"name":"negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032240"}


id: MONDO:0011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 17","secondary_identifiers":["OMIM:603622","GARD:9726","UMLS:C1863659","MEDGEN:350942","DOID:0110548"],"synonyms":[{"name":"DFNA17","type":"narrow"},{"name":"MYH9 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 17","type":"narrow"},{"name":"cochleosaccular degeneration","type":"related"},{"name":"deafness, autosomal dominant 17","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 17","type":"narrow"},{"name":"deafness, autosomal dominant type 17","type":"narrow"},{"name":"late-onset progressive hereditary hearing impairment due to cochleosaccular degeneration","type":"related"},{"name":"nonsyndromic hereditary deafness DFNA17","type":"narrow"}],"termid":"MONDO:0011350","xrefs":{"Monarch":{"xref_id":"0011350"}}}


id: PBO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam12","termid":"PBO:0017046"}


id: GO:1905460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","PMID:26493107","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell apoptotic process","termid":"GO:0034392"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of VSMC apoptosis","type":"narrow"},{"name":"down regulation of VSMC apoptotic process","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of VSMC apoptosis","type":"narrow"},{"name":"down-regulation of VSMC apoptotic process","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of VSMC apoptosis","type":"narrow"},{"name":"downregulation of VSMC apoptotic process","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"inhibition of VSMC apoptosis","type":"narrow"},{"name":"inhibition of VSMC apoptotic process","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"negative regulation of VSMC apoptosis","type":"narrow"},{"name":"negative regulation of VSMC apoptotic process","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905460"}


id: GO:0010971
data:
  {"annotated_genes":["SJAG_04597","SJAG_00214","SJAG_01805","SJAG_00216","SJAG_03067","SJAG_00256","SJAG_02592","SJAG_00117","SJAG_01456","SJAG_03602","SJAG_01901","SJAG_01000","SJAG_03592","SJAG_04486","SJAG_03309","SJAG_01837","SJAG_00883","SJAG_02342","SJAG_03486","SJAG_04332","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72491,75237,87498,87507,91211,91612,93279,93851,93890,97935,98508,101283,103018,106786,108136,109916,110782,116089,116278],"is_not":false,"summary":null,"term":"GO:0010971"},{"annotations":[87301,100914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle G2/M phase transition","termid":"GO:1902751"},{"relation_name":"positively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031662"],"synonyms":[{"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle","type":"related"},{"name":"positive regulation of mitotic entry","type":"exact"}],"termid":"GO:0010971","terms_by_termid":{"GO:0010971":null,"GO:1905287":null}}


id: PBO:0061813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 3 Y-linked","termid":"PBO:0061813"}


id: PBO:0066390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reeler domain containing 1","termid":"PBO:0066390"}


id: PBO:0072651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 4","termid":"PBO:0072651"}


id: MONDO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functional visual loss (obsolete MONDO:0041440)","secondary_identifiers":["SCTID:313165001"],"synonyms":[{"name":"functional visual loss","type":"exact"},{"name":"nonphysiologic acuity loss","type":"related"},{"name":"nonphysiologic vision loss","type":"related"}],"termid":"MONDO:0041440","xrefs":{"Monarch":{"xref_id":"0041440"}}}


id: PBO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 2","termid":"PBO:0071802"}


id: PR:P87048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03448","PRO:DNx","PANTHER:PTHR10943:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.03c","secondary_identifiers":["UniProtKB:P87048"],"synonyms":[{"name":"19S regulatory cap region of 26S protease subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSMD2","type":"exact"},{"name":"proteasome non-ATPase subunit mts4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87048"}


id: GO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a myeloid leukocyte.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte mediated immunity","synonyms":[{"name":"myeloid leucocyte immune effector process","type":"exact"},{"name":"myeloid leucocyte mediated immunity","type":"exact"},{"name":"myeloid leukocyte immune effector process","type":"exact"}],"termid":"GO:0002444"}


id: PBO:0038622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 3","termid":"PBO:0038622"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:23122962","PMID:32446654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: GO:0035481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035481)","synonyms":[{"name":"positive regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035481"}


id: FYPO:0001552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular zinc level","synonyms":[{"name":"increased cellular zinc ion level","type":"exact"},{"name":"increased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"increased cellular zinc level during vegetative growth","type":"exact"},{"name":"increased zinc accumulation","type":"related"}],"termid":"FYPO:0001552"}


id: MONDO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic preaxial polydactyly (obsolete MONDO:0034669)","secondary_identifiers":["Orphanet:498464"],"termid":"MONDO:0034669","xrefs":{"Monarch":{"xref_id":"0034669"}}}


id: SO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rearrangement breakpoint between two different chromosomes.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_breakpoint","synonyms":[{"name":"interchromosomal breakpoint","type":"exact"}],"termid":"SO:0001873"}


id: GO:0010296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein C-terminal S-farnesyl-L-cysteine methyl ester + H2O = protein C-terminal S-farnesyl-L-cysteine + methanol + H+.","definition_xrefs":["RHEA:48520","PMID:16870359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"prenylcysteine methylesterase activity","secondary_identifiers":["MetaCyc:RXN-8409"],"termid":"GO:0010296"}


id: MONDO:0013007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency due to Calcium release activated Ca2+ (CRAC) channel dysfunction characterized by recurrent infections, congenital myopathy, ectodermal dysplasia and anhydrosis.","definition_xrefs":["Orphanet:317428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency due to CRAC channel dysfunction","termid":"MONDO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to ORAI1 deficiency","secondary_identifiers":["icd11.foundation:677672007","GARD:10524","MEDGEN:440578","MESH:C557826","OMIM:612782","UMLS:C2748568","DOID:0111976"],"synonyms":[{"name":"CID due to ORAI1 deficiency","type":"exact"},{"name":"IMD9","type":"related"},{"name":"immune dysfunction with T-cell inactivation due to calcium entry defect 1","type":"related"},{"name":"immunodeficiency 9","type":"related"},{"name":"immunodeficiency type 9","type":"exact"}],"termid":"MONDO:0013007","xrefs":{"Monarch":{"xref_id":"0013007"}}}


id: MONDO:0020920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Escherichia Coli.","definition_xrefs":["NCIT:C34594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"escherichia coli infection","secondary_identifiers":["HP:0002740","GTR:AN0485755","EFO:1001318","UMLS:C0014836","GTR:AN0485754","SCTID:71057007","GTR:AN0474198","MEDGEN:4543","MESH:D004927"],"synonyms":[{"name":"Bacterial infection caused by E. coli","type":"related"},{"name":"Bacterial infection due to E. coli","type":"related"},{"name":"Colibacillosis","type":"related"},{"name":"E COLI INFECT","type":"related"},{"name":"E Coli Infection","type":"related"},{"name":"E coli Infection","type":"related"},{"name":"E coli Infections","type":"related"},{"name":"E coli infections","type":"related"},{"name":"E coli infections, recurrent","type":"related"},{"name":"E. coli Infection","type":"related"},{"name":"E. coli Infections","type":"related"},{"name":"E. coli infection","type":"related"},{"name":"ESCHERICHIA COLI INFECT","type":"related"},{"name":"Escherichia Coli Infection","type":"related"},{"name":"Escherichia coli Infection","type":"related"},{"name":"Escherichia coli Infections","type":"related"},{"name":"Escherichia coli infection","type":"related"},{"name":"INFECT E COLI","type":"related"},{"name":"INFECT ESCHERICHIA COLI","type":"related"},{"name":"Infection caused by Escherichia coli","type":"related"},{"name":"Infection due to Escherichia coli","type":"related"},{"name":"Infection, E coli","type":"related"},{"name":"Infection, E. coli","type":"related"},{"name":"Infection, Escherichia coli","type":"related"},{"name":"Infections, E coli","type":"related"},{"name":"Infections, Escherichia coli","type":"related"},{"name":"Recurrent E. coli infections","type":"related"},{"name":"e coli infection","type":"exact"},{"name":"escherichia coli infection","type":"exact"}],"termid":"MONDO:0020920","xrefs":{"Monarch":{"xref_id":"0020920"}}}


id: FYPO:0000294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any RNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"RNA metabolism phenotype","synonyms":[{"name":"RNA metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"RNA metabolism phenotype during vegetative growth","type":"exact"},{"name":"fission yeast RNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000294"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:9020082","PMID:12133724","PMID:9704409","PMID:11048732","Prosite:PS01259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: PBO:0047291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAR1 intronic transcript 1","termid":"PBO:0047291"}


id: MONDO:0054559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIq","secondary_identifiers":["UMLS:C4479353","DOID:0070269","MEDGEN:1390458","Orphanet:435934","OMIM:617395","GARD:17720"],"synonyms":[{"name":"CDG Iiq","type":"related"},{"name":"CDG2Q","type":"related"},{"name":"COG2-CDG","type":"exact"},{"name":"COG2-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0054559","xrefs":{"Monarch":{"xref_id":"0054559"}}}


id: PBO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 20","termid":"PBO:0050318"}


id: MONDO:0011632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the MATR3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 21","secondary_identifiers":["GARD:18619","DOID:0060212","OMIM:606070","UMLS:C3807521","MEDGEN:813851","NCIT:C168755"],"synonyms":[{"name":"ALS21","type":"exact"},{"name":"MATR3 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 21","type":"related"},{"name":"amyotrophic lateral sclerosis caused by mutation in MATR3","type":"exact"},{"name":"amyotrophic lateral sclerosis type 21","type":"exact"},{"name":"myopathy, distal, 2","type":"related"},{"name":"myopathy, distal, 2, formerly","type":"related"},{"name":"vocal cord and pharyngeal dysfunction with distal myopathy","type":"related"},{"name":"vocal cord and pharyngeal dysfunction with distal myopathy, formerly","type":"related"}],"termid":"MONDO:0011632","xrefs":{"Monarch":{"xref_id":"0011632"}}}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["GOC:isa_complete","ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: GO:0008628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone, and which triggers the apoptotic signaling pathway in a cell. The pathway starts with reception of a hormone signal, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hormone-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to hormone","type":"related"},{"name":"induction of apoptosis by hormones","type":"related"}],"termid":"GO:0008628"}


id: PBO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic GMP-AMP synthase","termid":"PBO:0042922"}


id: PBO:0079122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 13","termid":"PBO:0079122"}


id: GO:1900706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of siderophore biosynthetic process","termid":"GO:1900704"},{"relation_name":"positively_regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of siderophore biosynthetic process","synonyms":[{"name":"activation of siderochrome biosynthesis","type":"narrow"},{"name":"activation of siderochrome biosynthetic process","type":"narrow"},{"name":"activation of siderophore anabolism","type":"exact"},{"name":"activation of siderophore biosynthesis","type":"exact"},{"name":"activation of siderophore biosynthetic process","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of siderophore formation","type":"exact"},{"name":"activation of siderophore synthesis","type":"exact"},{"name":"positive regulation of siderochrome biosynthesis","type":"narrow"},{"name":"positive regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"positive regulation of siderophore anabolism","type":"exact"},{"name":"positive regulation of siderophore biosynthesis","type":"exact"},{"name":"positive regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of siderophore formation","type":"exact"},{"name":"positive regulation of siderophore synthesis","type":"exact"},{"name":"up regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up regulation of siderophore anabolism","type":"exact"},{"name":"up regulation of siderophore biosynthesis","type":"exact"},{"name":"up regulation of siderophore biosynthetic process","type":"exact"},{"name":"up regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of siderophore formation","type":"exact"},{"name":"up regulation of siderophore synthesis","type":"exact"},{"name":"up-regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up-regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up-regulation of siderophore anabolism","type":"exact"},{"name":"up-regulation of siderophore biosynthesis","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of siderophore formation","type":"exact"},{"name":"up-regulation of siderophore synthesis","type":"exact"},{"name":"upregulation of siderochrome biosynthesis","type":"narrow"},{"name":"upregulation of siderochrome biosynthetic process","type":"narrow"},{"name":"upregulation of siderophore anabolism","type":"exact"},{"name":"upregulation of siderophore biosynthesis","type":"exact"},{"name":"upregulation of siderophore biosynthetic process","type":"exact"},{"name":"upregulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of siderophore formation","type":"exact"},{"name":"upregulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900706"}


id: PBO:0083498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL221C/FSP2","termid":"PBO:0083498"}


id: MONDO:0007056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is characterized by degeneration of the distal phalanges.","definition_xrefs":["NCIT:C35545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acroosteolysis","secondary_identifiers":["OMIM:102400","MESH:D030981","MEDGEN:183017","SCTID:27201004","UMLS:C0917990","GARD:15031"],"synonyms":[{"name":"acroosteolysis","type":"exact"}],"termid":"MONDO:0007056","xrefs":{"Monarch":{"xref_id":"0007056"}}}


id: SO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the nucleus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_localization_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Nuclear_localization_signal"],"synonyms":[{"name":"NLS","type":"exact"}],"termid":"SO:0001528"}


id: PBO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EB1 family Mal3","termid":"PBO:0001434"}


id: GO:0021903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is divided into specific regions along the rostrocaudal axis.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","PMID:11262869","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostrocaudal neural tube patterning","synonyms":[{"name":"anterior-posterior neural tube patterning","type":"related"}],"termid":"GO:0021903"}


id: GO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 8 O-glycan structure, Gal-alpha-(1->3)-GalNAc.","definition_xrefs":["GOC:mah","PMID:10580130","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 8 (obsolete GO:0031044)","termid":"GO:0031044"}


id: PBO:0040206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrotactin 2","termid":"PBO:0040206"}


id: GO:0006890
data:
  {"annotated_genes":["SJAG_02482","SJAG_01508","SJAG_00557","SJAG_01516","SJAG_00192","SJAG_01940","SJAG_04592","SJAG_02204","SJAG_04956","SJAG_02586","SJAG_03499","SJAG_04701","SJAG_04569","SJAG_04340","SJAG_04391","SJAG_02418","SJAG_05209","SJAG_03933","SJAG_04402","SJAG_04474","SJAG_02419","SJAG_05030","SJAG_01927","SJAG_04070","SJAG_01166","SJAG_02234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65275,67025,68553,70552,72624,72782,73010,74111,74468,75401,75659,77084,77428,78406,79369,79664,79802,90037,92373,92708,97255,97962,98053,98983,113222],"is_not":false,"summary":null,"term":"GO:0006890"},{"annotations":[113214],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.","definition_xrefs":["PMID:16510524","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00557":null,"SJAG_01166":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01927":null,"SJAG_01940":null,"SJAG_02204":null,"SJAG_02234":null,"SJAG_02418":null,"SJAG_02419":null,"SJAG_02482":null,"SJAG_02586":null,"SJAG_03499":null,"SJAG_03933":null,"SJAG_04070":null,"SJAG_04340":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04701":null,"SJAG_04956":null,"SJAG_05030":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0048220","Reactome:R-HSA-6811434"],"synonyms":[{"name":"cis-Golgi to rough ER transport","type":"exact"},{"name":"cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"retrograde (Golgi to ER) transport","type":"exact"},{"name":"retrograde transport, Golgi to ER","type":"exact"},{"name":"retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"retrograde vesicle-mediated transport, Golgi to ER","type":"exact"}],"termid":"GO:0006890","terms_by_termid":{"GO:0006890":null,"GO:2000156":null}}


id: PBO:0110170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110170"}


id: PBO:0067473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 604, pseudogene","termid":"PBO:0067473"}


id: GO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + H+ + NADPH + O2 = 3-hydroxybenzoyl-CoA + H2O + NADP+.","definition_xrefs":["EC:1.14.13.58","RHEA:23216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzoyl-CoA 3-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02449","MetaCyc:1.14.13.58-RXN"],"synonyms":[{"name":"benzoyl-CoA 3-hydroxylase activity","type":"exact"},{"name":"benzoyl-CoA,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0047090"}


id: GO:0102361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose = 4-O-beta-D-glucosyl-esculetin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin 4-O-beta-glucosyltransferase activity (obsolete GO:0102361)","termid":"GO:0102361"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_00332","SJAG_01297","SJAG_04745","SJAG_02336","SJAG_00930","SJAG_00773","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63023,77581,77708,79586,80617,103079,103279],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003774"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0003774"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:5.6.1.3","MetaCyc:3.6.4.4-RXN"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: PBO:0043529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordon-bleu WH2 repeat protein","termid":"PBO:0043529"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:bf","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: PBO:0079086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 3-1","termid":"PBO:0079086"}


id: GO:0004034
data:
  {"annotated_genes":["SJAG_03818","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113316,113317],"is_not":false,"summary":null,"term":"GO:0004034"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose = beta-D-glucose. Also acts on L-arabinose, D-xylose, D-galactose, maltose and lactose.","definition_xrefs":["EC:5.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"aldose 1-epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALDOSE-1-EPIMERASE-RXN"],"synonyms":[{"name":"aldose mutarotase activity","type":"related"},{"name":"mutarotase activity","type":"related"}],"termid":"GO:0004034","terms_by_termid":{"GO:0004034":null}}


id: PBO:0071546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 11","termid":"PBO:0071546"}


id: GO:0061944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of K48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"},{"relation_name":"is_a","term_name":"negative regulation of protein polyubiquitination","termid":"GO:1902915"},{"relation_name":"negatively_regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein K48-linked ubiquitination","termid":"GO:0061944"}


id: FYPO:0005168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to salt stress","synonyms":[{"name":"normal protein accumulation during cellular response to salt stress","type":"related"},{"name":"normal protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005168"}


id: GO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA binding","synonyms":[{"name":"down regulation of DNA binding","type":"exact"},{"name":"down-regulation of DNA binding","type":"exact"},{"name":"downregulation of DNA binding","type":"exact"},{"name":"inhibition of DNA binding","type":"narrow"}],"termid":"GO:0043392"}


id: PR:O94566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug184 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 184 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.09c","synonyms":[{"name":"Spom972h-mug184","type":"exact"}],"termid":"PR:O94566"}


id: PBO:0057975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3690","termid":"PBO:0057975"}


id: PBO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member E, pseudogene","termid":"PBO:0047086"}


id: MONDO:0004515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olfactory neural tumor (obsolete MONDO:0004515)","termid":"MONDO:0004515","xrefs":{"Monarch":{"xref_id":"0004515"}}}


id: GO:0010807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:kmv","PMID:15489511","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle priming","termid":"GO:0010807"}


id: PATO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000995 viscosity value (obsolete PATO:0000995)","termid":"PATO:0000995"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: PATO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000866 suckling reflex value (obsolete PATO:0000866)","termid":"PATO:0000866"}


id: MONDO:0014700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome","termid":"MONDO:0018681"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Au-Kline syndrome","secondary_identifiers":["MESH:C565736","SCTID:722065002","OMIM:604916","GARD:4064","MEDGEN:900671","Orphanet:453504","Orphanet:2729","UMLS:C4225274","OMIM:616580"],"synonyms":[{"name":"AUKS","type":"exact"},{"name":"Au-Kline syndrome","type":"exact"},{"name":"Okamoto syndrome","type":"exact"},{"name":"congenital hydronephrosis with cleft palate, characteristic facies, hypotonia, and intellectual disability","type":"related"},{"name":"congenital hydronephrosis with cleft palate, characteristic facies, hypotonia, and mental retardation","type":"related"},{"name":"hydronephrosis, congenital, with cleft palate, characteristic facies, hypotonia, and intellectual disability","type":"exact"},{"name":"hydronephrosis, congenital, with cleft palate, characteristic facies, hypotonia, and mental retardation","type":"exact"},{"name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome due to a point mutation","type":"exact"}],"termid":"MONDO:0014700","xrefs":{"Monarch":{"xref_id":"0014700"}}}


id: PBO:0064575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostin","termid":"PBO:0064575"}


id: GO:0103016
data:
  {"annotated_genes":["SJAG_03932","SJAG_00358","SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93747,105411,107976],"is_not":false,"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + ATP + S-sulfanyl-L-cysteinyl-[protein] + uridine(34) in tRNA = 2-thiouridine(34) in tRNA + A + AMP + diphosphate + H+ + L-cysteinyl-[protein].","definition_xrefs":["RHEA:47032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0003674","GO:0140098","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"tRNA-uridine 2-sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.1.13","MetaCyc:RXN0-2023"],"synonyms":[{"name":"tRNA-specific 2-thiouridylase activity","type":"related"},{"name":"tRNA-uracil-34 sulfurtransferase activity","type":"related"}],"termid":"GO:0103016","terms_by_termid":{"GO:0103016":null}}


id: GO:0048578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0709408862","GOC:pj","GOC:jid","ISBN:0582015952","ISBN:0697037754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"},{"relation_name":"positively_regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-day photoperiodism, flowering","synonyms":[{"name":"activation of long-day photoperiodism, flowering","type":"narrow"},{"name":"stimulation of long-day photoperiodism, flowering","type":"narrow"},{"name":"up regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"up-regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"upregulation of long-day photoperiodism, flowering","type":"exact"}],"termid":"GO:0048578"}


id: PBO:0044119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 4","termid":"PBO:0044119"}


id: MONDO:0056820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the nasal cavity or paranasal sinuses. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C7336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal cavity and paranasal sinus neoplasm","secondary_identifiers":["MEDGEN:235362","UMLS:C1334925"],"synonyms":[{"name":"nasal cavity and paranasal sinus neoplasm","type":"exact"}],"termid":"MONDO:0056820","xrefs":{"Monarch":{"xref_id":"0056820"}}}


id: PBO:0088761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1","termid":"PBO:0088761"}


id: PBO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha D","termid":"PBO:0051905"}


id: PBO:0062353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily N member 1","termid":"PBO:0062353"}


id: GO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of ovarian follicle cells to create the interfollicular stalks that connect the egg chambers of progressive developmental stages. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber stalk formation","termid":"GO:0030713"}


id: GO:0090025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of monocyte chemotaxis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"monocyte chemotaxis","termid":"GO:0002548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte chemotaxis","termid":"GO:0090025"}


id: PBO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec15 (predicted)","termid":"PBO:0005204"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117730],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"lncRNA catabolic process","termid":"GO:0110064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: GO:0040033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of small regulatory non-coding RNAs (sRNAs). sRNAs are 20-500 nucleotides in length and found in bacteria.","definition_xrefs":["PMID:2468565","PMID:12460531","PMID:33963446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"sRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"RNA-mediated gene silencing by inhibition of translation","type":"broad"},{"name":"downregulation of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"inhibition of mRNA translation, ncRNA-mediated","type":"broad"},{"name":"sRNA-mediated gene silencing","type":"broad"},{"name":"small RNA-mediated gene silencing","type":"exact"}],"termid":"GO:0040033"}


id: MONDO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to orient parts of the body.","definition_xrefs":["DOID:0060138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autotopagnosia","secondary_identifiers":["UMLS:C0234511","MEDGEN:65883"],"termid":"MONDO:0000668","xrefs":{"Monarch":{"xref_id":"0000668"}}}


id: PBO:0044351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 38","termid":"PBO:0044351"}


id: FYPO:0000074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of a drug than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to drug (obsolete FYPO:0000074)","synonyms":[{"name":"drug resistance","type":"exact"},{"name":"drug resistant","type":"exact"},{"name":"resistance to drug during vegetative growth","type":"exact"},{"name":"resistant to drugs","type":"exact"}],"termid":"FYPO:0000074"}


id: GO:0031111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule polymerization or depolymerization","termid":"GO:0031110"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"negative regulation of microtubule polymerization or depolymerization","synonyms":[{"name":"down regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"down-regulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"downregulation of microtubule polymerization or depolymerization","type":"exact"},{"name":"inhibition of microtubule polymerization or depolymerization","type":"narrow"}],"termid":"GO:0031111"}


id: GO:0120243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-iminopropanoate + H2O = NH4(+) + pyruvate.","definition_xrefs":["RHEA:40671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-iminobutanoate/2-iminopropanoate deaminase","termid":"GO:0120241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-iminopropanoate deaminase activity","secondary_identifiers":["KEGG_REACTION:R11099","MetaCyc:RXN-15127"],"synonyms":[{"name":"2-iminobutanoate/2-iminopropanoate deaminase","type":"broad"}],"termid":"GO:0120243"}


id: PBO:0064447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan","termid":"PBO:0064447"}


id: PBO:0058286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4662a","termid":"PBO:0058286"}


id: MONDO:0006320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma is a malignant tumor of melanocytes, cells that are derived from the neural crest. Although most melanomas arise in the skin, they also may arise from mucosal surfaces or at other sites to which neural crest cells migrate. (PDQ)","definition_xrefs":["NCIT:C8711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-cutaneous melanoma","secondary_identifiers":["UMLS:C1334974","EFO:1000397","MEDGEN:233761"],"synonyms":[{"name":"extracutaneous melanoma","type":"exact"},{"name":"non-cutaneous melanoma","type":"exact"}],"termid":"MONDO:0006320","xrefs":{"Monarch":{"xref_id":"0006320"}}}


id: GO:0047474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + L-cysteinyl-[protein] = AMP + diphosphate + S-(long-chain fatty acyl)-L-cysteinyl-[protein]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["EC:6.2.1.19","MetaCyc:6.2.1.19-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid--protein ligase activity","secondary_identifiers":["RHEA:20101"],"synonyms":[{"name":"acyl-protein synthetase activity","type":"related"},{"name":"long-chain fatty acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid luciferin component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-luciferin-component ligase activity","type":"exact"},{"name":"long-chain-fatty-acid:protein ligase (AMP-forming)","type":"related"}],"termid":"GO:0047474"}


id: MONDO:0011303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the ACTN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 1","secondary_identifiers":["OMIM:603278","UMLS:C4551527","MESH:C538457","MEDGEN:1636833","DOID:0111128","GARD:15353","Orphanet:93213"],"synonyms":[{"name":"ACTN4 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS1","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental glomerulosclerosis","type":"exact"},{"name":"familial idiopathic steroid-resistant nephrotic syndrome with focal segmental hyalinosis","type":"related"},{"name":"focal segmental glomerulosclerosis 1","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in ACTN4","type":"exact"},{"name":"focal segmental glomerulosclerosis type 1","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 1","type":"related"}],"termid":"MONDO:0011303","xrefs":{"Monarch":{"xref_id":"0011303"}}}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:15705871","GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: PBO:0063867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A","termid":"PBO:0063867"}


id: GO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a glycyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0165"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-glycyl-glycosylsphingolipidinositolethanolamine (obsolete GO:0050494)","synonyms":[{"name":"GSI anchor anabolism via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0050494"}


id: MONDO:0013425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RPE65 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"RPE65-related recessive retinopathy","termid":"MONDO:0100368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736","MONDO:0006025"],"is_obsolete":false,"name":"retinitis pigmentosa 20","secondary_identifiers":["MEDGEN:462436","MESH:C566718","UMLS:C3151086","ICD10CM:H35.5","OMIM:613794","DOID:0110353","HGNC:10294","GARD:10404"],"synonyms":[{"name":"RP 20","type":"related"},{"name":"RP20","type":"exact"},{"name":"RPE65 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 20","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RPE65","type":"exact"},{"name":"retinitis pigmentosa type 20","type":"exact"}],"termid":"MONDO:0013425","xrefs":{"Monarch":{"xref_id":"0013425"}}}


id: PBO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex alpha subunit Alp3","termid":"PBO:0034757"}


id: FYPO:0002377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable swollen vegetative cell","synonyms":[{"name":"viable enlarged vegetative cell","type":"related"},{"name":"viable large vegetative cell","type":"related"},{"name":"viable swollen cell during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with increased cell size","type":"related"},{"name":"viable vegetative cell with increased cell volume","type":"exact"}],"termid":"FYPO:0002377"}


id: PBO:0083031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion suppressor of mpt5 mutation; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0083031"}


id: MONDO:1010000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by the aquatic organism pythium insidiosum occurring rarely in humans. It is classified into three forms: ocular, cutaneous, and arterial.","definition_xrefs":["MESH:D058968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pythiosis","secondary_identifiers":["icd11.foundation:1571230529","GARD:11989","MEDGEN:124447","UMLS:C0276912"],"synonyms":[{"name":"human pythiosis","type":"exact"},{"name":"pythium insidiosum infection","type":"exact"}],"termid":"MONDO:1010000","xrefs":{"Monarch":{"xref_id":"1010000"}}}


id: PBO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 5","termid":"PBO:0061953"}


id: GO:0039023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric duct are generated and organized. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the kidney.","definition_xrefs":["XAO:0000063","ZFA:0000150","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"pronephric duct development","termid":"GO:0039022"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct morphogenesis","termid":"GO:0039023"}


id: GO:0009800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cinnamic acid biosynthetic process","synonyms":[{"name":"cinnamic acid anabolism","type":"exact"},{"name":"cinnamic acid biosynthesis","type":"exact"},{"name":"cinnamic acid formation","type":"exact"},{"name":"cinnamic acid synthesis","type":"exact"},{"name":"cinnamylic acid biosynthesis","type":"exact"},{"name":"cinnamylic acid biosynthetic process","type":"exact"},{"name":"phenylacrylic acid biosynthesis","type":"exact"},{"name":"phenylacrylic acid biosynthetic process","type":"exact"},{"name":"phenylpropenoic acid biosynthesis","type":"exact"},{"name":"phenylpropenoic acid biosynthetic process","type":"exact"}],"termid":"GO:0009800"}


id: GO:0140522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of joining two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:11493675","PMID:12600315","PMID:32100701","PMID:32641474","PMID:10332732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"fusogenic activity","termid":"GO:0140522"}


id: MONDO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from fungi.","definition_xrefs":["NCIT:C27342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal gastritis","secondary_identifiers":["DOID:4034","MEDGEN:181761","SCTID:723097009","UMLS:C0948638"],"synonyms":[{"name":"Fungi caused gastritis (disease)","type":"exact"},{"name":"Fungi gastritis (disease)","type":"exact"},{"name":"fungal gastritis","type":"exact"}],"termid":"MONDO:0002843","xrefs":{"Monarch":{"xref_id":"0002843"}}}


id: PBO:0082248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated; N-terminally propionylated in vivo","termid":"PBO:0082248"}


id: GO:0000250
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75725],"is_not":false,"summary":null,"term":"GO:0000250"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus.","definition_xrefs":["EC:5.4.99.7","RHEA:14621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"lanosterol synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03199","MetaCyc:LANOSTEROL-SYNTHASE-RXN","Reactome:R-HSA-191366"],"synonyms":[{"name":"(S)-2,3-epoxysqualene mutase (cyclizing, lanosterol-forming)","type":"related"},{"name":"2,3-epoxysqualene lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene--lanosterol cyclase activity","type":"related"},{"name":"2,3-epoxysqualene-lanosterol cyclase activity","type":"exact"},{"name":"2,3-oxidosqualene sterol cyclase activity","type":"broad"},{"name":"2,3-oxidosqualene-lanosterol cyclase activity","type":"related"},{"name":"OSC","type":"exact"},{"name":"lanosterol 2,3-oxidosqualene cyclase activity","type":"related"},{"name":"oxidosqualene--lanosterol cyclase activity","type":"related"},{"name":"oxidosqualene-lanosterol cyclase activity","type":"exact"},{"name":"oxidosqualene:lanosterol cyclase activity","type":"exact"},{"name":"squalene 2,3-epoxide:lanosterol cyclase activity","type":"related"},{"name":"squalene epoxidase-cyclase activity","type":"broad"},{"name":"squalene-2,3-oxide-lanosterol cyclase activity","type":"related"}],"termid":"GO:0000250","terms_by_termid":{"GO:0000250":null}}


id: GO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phaseic acid (PA), a catabolite of the plant hormone abscisic acid (ABA).","definition_xrefs":["MetaCyc:PWY-5271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phaseic acid biosynthetic process","termid":"GO:0010379"}


id: MONDO:0014437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS9-related ciliopathy","termid":"MONDO:0700236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 9","secondary_identifiers":["UMLS:C1859567","DOID:0110131","OMIM:615986","MESH:C565918","GARD:10208","MEDGEN:347182"],"synonyms":[{"name":"BBS9","type":"exact"},{"name":"BBS9 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 9","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS9","type":"exact"},{"name":"Bardet-Biedl syndrome type 9","type":"exact"}],"termid":"MONDO:0014437","xrefs":{"Monarch":{"xref_id":"0014437"}}}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: FYPO:0001056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-arginine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal arginine import","synonyms":[{"name":"normal L-arginine import","type":"exact"},{"name":"normal L-arginine import across plasma membrane","type":"exact"},{"name":"normal L-arginine uptake","type":"exact"},{"name":"normal arginine import during mitotic cell cycle","type":"related"},{"name":"normal arginine import during vegetative growth","type":"exact"},{"name":"normal arginine import into cell","type":"exact"}],"termid":"FYPO:0001056"}


id: GO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of one bond in native collagen. Cleavage of the triple helix of collagen at about three-quarters of the length of the molecule from the N-terminus, at Gly775-Ile776 in the alpha-1(I) chain. Cleaves synthetic substrates and alpha-macroglobulins at bonds where P1' is a hydrophobic residue.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interstitial collagenase activity (obsolete GO:0004232)","synonyms":[{"name":"MMP-1","type":"exact"},{"name":"interstitial collagenase activity","type":"exact"},{"name":"matrix metalloproteinase 1","type":"exact"},{"name":"vertebrate collagenase activity","type":"related"}],"termid":"GO:0004232"}


id: PBO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_zinc_level","termid":"PBO:0030134"}


id: MONDO:0032622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 17","secondary_identifiers":["OMIM:618239","MEDGEN:1648418","DOID:0112078","GARD:18372","UMLS:C4748786"],"synonyms":[{"name":"MC1DN17","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 17","type":"related"}],"termid":"MONDO:0032622","xrefs":{"Monarch":{"xref_id":"0032622"}}}


id: GO:0140966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process mediated by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:23329111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"piRNA-mediated heterochromatin formation","synonyms":[{"name":"piRNA-directed heterochromatin formation","type":"exact"},{"name":"piwiRNA-directed heterochromatin formation","type":"exact"}],"termid":"GO:0140966"}


id: PBO:0081470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 343","termid":"PBO:0081470"}


id: GO:0014810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014810"}


id: PBO:0069534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 804, pseudogene","termid":"PBO:0069534"}


id: MONDO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the stomach and is characterized by the presence of connective tissue stroma overgrowth and cystic formations.","definition_xrefs":["NCIT:C4373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric hamartomatous polyp","secondary_identifiers":["SCTID:235685007","MEDGEN:90961","EFO:1000271","UMLS:C0341225"],"synonyms":[{"name":"gastric hamartomatous polyp","type":"exact"},{"name":"hamartoma of stomach","type":"exact"},{"name":"hamartoma of the stomach","type":"exact"},{"name":"stomach hamartoma (disease)","type":"exact"}],"termid":"MONDO:0006224","xrefs":{"Monarch":{"xref_id":"0006224"}}}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: PBO:0087592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; subunit of the telomere cap complex DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087592"}


id: PBO:0089161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex","termid":"PBO:0089161"}


id: PBO:0085457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potential adenine phosphoribosyltransferase; encodes a protein with similarity to adenine phosphoribosyltransferase, but artificially expressed protein exhibits no enzymatic activity; APT2 has a paralog, APT1, that arose from the whole genome duplication","termid":"PBO:0085457"}


id: PBO:0089298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","termid":"PBO:0089298"}


id: GO:0051102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA recombination.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA ligation involved in DNA recombination (obsolete GO:0051102)","synonyms":[{"name":"DNA ligation during DNA recombination","type":"related"}],"termid":"GO:0051102"}


id: PBO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with_condition","termid":"PBO:0034238"}


id: PBO:0085737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein","termid":"PBO:0085737"}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: GO:0019848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another organism by inhibiting voltage-gated calcium ion channels and neurotransmitter release. This function is thought to be specific to the venom of two marine snail species.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete conotoxin activity (obsolete GO:0019848)","synonyms":[{"name":"conotoxin activity","type":"exact"}],"termid":"GO:0019848"}


id: MONDO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 6 (SPG6) is a form of hereditary spastic paraplegia which usually presents in late adolescence or early adulthood as a pure phenotype of lower limb spasticity with hyperreflexia and extensor plantar responses, as well as mild bladder disturbances and pes cavus. Rarely, it can present as a complex phenotype with additional manifestations including epilepsy, variable peripheral neuropathy and/or memory impairment.","definition_xrefs":["Orphanet:100988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 6","secondary_identifiers":["OMIM:600363","DOID:0110811","SCTID:732949006","GARD:4928","UMLS:C1838192","MEDGEN:324965","MESH:C536866"],"synonyms":[{"name":"FSP3","type":"exact"},{"name":"NIPA1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG6","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia type 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia 6","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 6","type":"exact"},{"name":"familial spastic paraplegia autosomal dominant 3","type":"related"},{"name":"familial spastic paraplegia, autosomal dominant, 3","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in NIPA1","type":"exact"},{"name":"hereditary spastic paraplegia type 6","type":"exact"},{"name":"spastic paraplegia 6","type":"related"},{"name":"spastic paraplegia 6, autosomal dominant","type":"related"}],"termid":"MONDO:0010878","xrefs":{"Monarch":{"xref_id":"0010878"}}}


id: GO:0005760
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63757],"is_not":false,"summary":null,"term":"GO:0005760"}]},"cv_name":"cellular_component","definition":"A DNA polymerase complex consisting of a large subunit, responsible for the catalytic activities, and a small accessory subunit. Functions in the replication and repair of mitochondrial DNA.","definition_xrefs":["PMID:12045093","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"gamma DNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0005760","terms_by_termid":{"GO:0005760":null}}


id: PBO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, ribosomal subunit L35 (predicted)","termid":"PBO:0003602"}


id: MONDO:0023650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Littoral cell angioma is a rare primary vascular neoplasm of the spleen, composed of littoral cells that line the splenic sinuses of the red pulp. It was thought to be a benign, incidental lesion. However, many recent reports have described it to be a malignant lesion with congenital and immunological associations. The definitive diagnosis can only be made after histology and immunohistochemistry studies.","direct_ancestors":[{"relation_name":"is_a","term_name":"splenic hemangioma","termid":"MONDO:0002343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"littoral cell angioma of the spleen","secondary_identifiers":["MEDGEN:351507","SCTID:418040002","NCIT:C200524","GARD:9714","MESH:C537031","UMLS:C1627365"],"synonyms":[{"name":"littoral cell angioma","type":"related"}],"termid":"MONDO:0023650","xrefs":{"Monarch":{"xref_id":"0023650"}}}


id: GO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-24 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 receptor binding","synonyms":[{"name":"IL-24","type":"narrow"},{"name":"interleukin-24 receptor ligand","type":"narrow"}],"termid":"GO:0045520"}


id: MONDO:0018967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"isolated growth hormone deficiency type III","termid":"MONDO:0010615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005570"],"is_obsolete":false,"name":"short stature due to isolated growth hormone deficiency with X-linked hypogammaglobulinemia","secondary_identifiers":["GARD:16538","Orphanet:632"],"termid":"MONDO:0018967","xrefs":{"Monarch":{"xref_id":"0018967"}}}


id: MONDO:0005464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment secondary to retinal tear or break.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment","termid":"MONDO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rhegmatogenous retinal detachment","secondary_identifiers":["MEDGEN:489829","SCTID:19620000","EFO:0005240","NCIT:C118755","UMLS:C0271055"],"termid":"MONDO:0005464","xrefs":{"Monarch":{"xref_id":"0005464"}}}


id: PBO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 7","termid":"PBO:0045895"}


