# terms

id: PATO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having a shape resembling a dome.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"domed","termid":"PATO:0001789"}


id: PBO:0048564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 2","termid":"PBO:0048564"}


id: MONDO:0006730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Psychotic organic mental disorders resulting from the toxic effect of drugs and chemicals or other harmful substance.","definition_xrefs":["MESH:D011605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-induced mental disorder","termid":"MONDO:0001423"},{"relation_name":"is_a","term_name":"substance-induced psychosis","termid":"MONDO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"drug psychosis","secondary_identifiers":["MEDGEN:46195","ICD9:292.1","MedDRA:10045855","SCTID:191483003","UMLS:C0033937","DOID:1742"],"synonyms":[{"name":"drug-induced psychosis","type":"exact"},{"name":"drug-induced psychotic disorder","type":"exact"}],"termid":"MONDO:0006730","xrefs":{"Monarch":{"xref_id":"0006730"}}}


id: PBO:0042289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 cytoplasmic tail binding protein 2","termid":"PBO:0042289"}


id: PBO:0082934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in folding of newly-made polypeptide chains; member of the HSP70 family; interacts with phosphatase subunit Reg1p; SSB1 has a paralog, SSB2, that arose from the whole genome duplication","termid":"PBO:0082934"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01785","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: MONDO:0021474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ear","secondary_identifiers":["NCIT:C8417","SCTID:255181009","MEDGEN:138081","UMLS:C0347354"],"synonyms":[{"name":"aural neoplasms, benign","type":"exact"},{"name":"benign Ear neoplasm","type":"exact"},{"name":"benign Ear tumor","type":"exact"},{"name":"benign Ear tumour","type":"exact"},{"name":"benign neoplasm of the Ear","type":"exact"},{"name":"benign tumor of Ear","type":"exact"},{"name":"benign tumor of the Ear","type":"exact"},{"name":"benign tumour of Ear","type":"exact"},{"name":"benign tumour of the Ear","type":"exact"},{"name":"ear benign neoplasm","type":"exact"}],"termid":"MONDO:0021474","xrefs":{"Monarch":{"xref_id":"0021474"}}}


id: MONDO:0021452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea neoplasm","termid":"MONDO:0021238"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of cornea","secondary_identifiers":["ICD9:224.4","SCTID:92070006","MEDGEN:57579","UMLS:C0154026","icd11.foundation:568257604","NCIT:C3623"],"synonyms":[{"name":"benign cornea neoplasm","type":"exact"},{"name":"benign cornea tumor","type":"exact"},{"name":"benign cornea tumour","type":"exact"},{"name":"benign corneal neoplasm","type":"exact"},{"name":"benign corneal tumor","type":"exact"},{"name":"benign corneal tumour","type":"exact"},{"name":"benign neoplasm of the cornea","type":"exact"},{"name":"benign tumor of cornea","type":"exact"},{"name":"benign tumor of the cornea","type":"exact"},{"name":"benign tumour of cornea","type":"exact"},{"name":"benign tumour of the cornea","type":"exact"},{"name":"cornea benign neoplasm","type":"exact"}],"termid":"MONDO:0021452","xrefs":{"Monarch":{"xref_id":"0021452"}}}


id: PATO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000484 tactile hyporesponsive (obsolete PATO:0000484)","termid":"PATO:0000484"}


id: MONDO:0018735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human MALT1 wild-type allele is located in the vicinity of 18q21 and is approximately 79 kb in length. This allele, which encodes mucosa associated lymphoid tissue lymphoma translocation gene 1 protein, plays a role in the modulation of the nuclear factor kappa B complex signaling cascade. The gene is involved in a chromosomal translocation t(11;18)(q21;q21) with the BIRC2 gene in mucosa-associated lymphoid tissue lymphomas.","definition_xrefs":["NCIT:C60672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multifocal lymphangioendotheliomatosis-thrombocytopenia syndrome","secondary_identifiers":["MEDGEN:1804470","GARD:10467","UMLS:C5575322","Orphanet:464321"],"synonyms":[{"name":"DKFZp434L132","type":"exact"},{"name":"MALT1 wt allele","type":"exact"},{"name":"MLT","type":"exact"},{"name":"MLT1","type":"exact"},{"name":"cutaneovisceral angiomatosis-thrombocytopenia syndrome","type":"exact"},{"name":"mucosa associated lymphoid tissue lymphoma translocation Gene 1 wt allele","type":"exact"},{"name":"multifocal lymphangioendotheliomatosis with thrombocytopenia","type":"exact"}],"termid":"MONDO:0018735","xrefs":{"Monarch":{"xref_id":"0018735"}}}


id: FYPO:0005917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin regions is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased subtelomeric heterochromatin RNA level","synonyms":[{"name":"accumulation of subtelomere-derived RNA transcripts","type":"related"},{"name":"increased transcription at subtelomere","type":"narrow"},{"name":"increased transcription at subtelomeric heterochromatin during vegetative growth","type":"narrow"}],"termid":"FYPO:0005917"}


id: GO:0044729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to double-stranded hemi-methylated DNA at replication foci (one strand methylated, while the other strand is unmethylated). Methylation of cytosine or adenine in DNA is an important mechanism for establishing stable heritable epigenetic marks.","definition_xrefs":["GOC:imk","PMID:18772889","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hemi-methylated DNA-binding","synonyms":[{"name":"double-stranded hemi-methylated DNA binding","type":"exact"}],"termid":"GO:0044729"}


id: MONDO:0034872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete large granular lymphocyte leukemia (obsolete MONDO:0034872)","secondary_identifiers":["Orphanet:512034"],"termid":"MONDO:0034872","xrefs":{"Monarch":{"xref_id":"0034872"}}}


id: GO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.","definition_xrefs":["GOC:bf","GOC:jl","VZ:1937","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single stranded viral RNA replication via double stranded DNA intermediate","secondary_identifiers":["GO:0045090"],"synonyms":[{"name":"retroviral genome replication","type":"exact"},{"name":"viral ssRNA replication via dsDNA intermediate","type":"related"}],"termid":"GO:0039692"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["GO:0008033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: GO:0102404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linalyl 6-O-alpha-L-arabinopyranosyl- beta-D-glucopyranoside + H2O = vicianose + linalool.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linalyl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity (obsolete GO:0102404)","termid":"GO:0102404"}


id: PBO:0080951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 5","termid":"PBO:0080951"}


id: FYPO:0004977
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a new cell tip is increased.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell tip during vegetative growth","termid":"FYPO:0002852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to new cell tip","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to new cell tip","type":"exact"},{"name":"increased protein localization to new cell end","type":"exact"},{"name":"increased protein localization to new cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to new cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004977","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:0000349
data:
  {"annotated_genes":["SJAG_01504","SJAG_00859","SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58384,79747,105322],"is_not":false,"summary":null,"term":"GO:0000349"}]},"cv_name":"biological_process","definition":"Formation of a catalytic spliceosome complex ready to perform the first splicing reaction. This occurs by an ATP-dependent conformational change of the pre-catalytic spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01315":null,"SJAG_01504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"generation of catalytic spliceosome for first transesterification step","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000357","GO:0000356"],"synonyms":[{"name":"U12-type catalytic spliceosome formation for first transesterification step","type":"narrow"},{"name":"U2-type catalytic spliceosome formation for first transesterification step","type":"narrow"},{"name":"catalytic spliceosome assembly for first transesterification step","type":"related"},{"name":"formation of catalytic spliceosome for first transesterification step","type":"exact"},{"name":"spliceosomal A2-2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-2 complex formation","type":"narrow"},{"name":"spliceosomal C1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C1 complex formation","type":"narrow"}],"termid":"GO:0000349","terms_by_termid":{"GO:0000349":null}}


id: GO:0047927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin 44 + 2-oxoglutarate + O2 = gibberellin 19 + succinate + CO2.","definition_xrefs":["PMID:32652020"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin-44 dioxygenase activity (obsolete GO:0047927)","termid":"GO:0047927"}


id: PR:Q9UTB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase C25B8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.05","synonyms":[{"name":"Spom972h-deg1","type":"exact"}],"termid":"PR:Q9UTB3"}


id: GO:0034829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxydec-2,4-diene-1,10-dioate + H2O = (2Z)-2,4-dihydroxydec-2-enedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxydec-2,4-diene-1,10-dioate hydratase activity (obsolete GO:0034829)","termid":"GO:0034829"}


id: PR:O74550
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtf1 gene.","definition_xrefs":["UniProtKB:O74550","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C777.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.11","synonyms":[{"name":"Spom972h-gtf1","type":"exact"}],"termid":"PR:O74550"}


id: GO:0004168
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82120],"is_not":false,"summary":null,"term":"GO:0004168"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + dolichol = CDP + dolichyl phosphate.","definition_xrefs":["EC:2.7.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichol kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-4755600","RHEA:13133","MetaCyc:DOLICHOL-KINASE-RXN","Reactome:R-HSA-446195"],"synonyms":[{"name":"CTP:dolichol O-phosphotransferase activity","type":"related"},{"name":"dolichol phosphokinase activity","type":"related"}],"termid":"GO:0004168","terms_by_termid":{"GO:0004168":null}}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: PBO:0041328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 81","termid":"PBO:0041328"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_00882","SJAG_02759","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75444,76607,77978],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["PMID:17353269","PMID:16043514","GOC:ab","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0030684","GO:0005730"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: GO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transverse filament","termid":"GO:0000802"}


id: PBO:0040879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 4","termid":"PBO:0040879"}


id: GO:0050421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitric oxide + Fe(III)-[cytochrome c] + H2O = Fe(II)-[cytochrome c] + nitrite + 2 H+.","definition_xrefs":["RHEA:15233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"},{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrite reductase (NO-forming) activity","secondary_identifiers":["MetaCyc:NITRITE-REDUCTASE-CYTOCHROME-RXN","EC:1.7.2.1","GO:0016666"],"synonyms":[{"name":"NO-forming nitrite reductase (cytochrome) activity","type":"exact"},{"name":"NO-forming nitrite reductase activity","type":"exact"},{"name":"[nitrite reductase (cytochrome)]","type":"related"},{"name":"cd-cytochrome nitrite reductase activity","type":"narrow"},{"name":"cytochrome c-551:O2, NO2(+) oxidoreductase activity","type":"related"},{"name":"cytochrome c-551:O2, NO2+ oxidoreductase activity","type":"related"},{"name":"cytochrome cd activity","type":"narrow"},{"name":"cytochrome cd1 activity","type":"narrow"},{"name":"methyl viologen-nitrite reductase activity","type":"narrow"},{"name":"nitric-oxide:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"nitrite reductase (cytochrome; NO-forming) activity","type":"related"}],"termid":"GO:0050421"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: PBO:0078331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-3","termid":"PBO:0078331"}


id: PBO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 9","termid":"PBO:0044964"}


id: GO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"},{"relation_name":"part_of","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during action potential","termid":"GO:0086010"}


id: GO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate.","definition_xrefs":["PMID:18394996"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamine:2-oxoglutarate aminotransferase activity (obsolete GO:0080100)","synonyms":[{"name":"L-glutamine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080100"}


id: PBO:0084338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore localized protein of unknown function; interacts with Cnn1p (CENP-T); orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-W and fission yeast new1","termid":"PBO:0084338"}


id: PATO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's lacking skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoordinated","termid":"PATO:0000770"}


id: PR:Q10362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.11c","synonyms":[{"name":"Spom972h-set3","type":"exact"}],"termid":"PR:Q10362"}


id: GO:0098579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sex chromosome that has not been inactivated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"active sex chromosome","termid":"GO:0098579"}


id: GO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031552)","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"negative regulation of BDNF receptor activity","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031552"}


id: PBO:0077644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: MONDO:0016273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor of corpus uteri","secondary_identifiers":["MEDGEN:1655229","GARD:20485","UMLS:C4750753","Orphanet:213751"],"synonyms":[{"name":"body of uterus malignant germ cell tumor","type":"exact"},{"name":"body of uterus malignant germ cell tumour","type":"exact"},{"name":"germ cell cancer of corpus uteri","type":"exact"},{"name":"germ cell cancer of the corpus uteri","type":"exact"},{"name":"malignant germ cell tumor of the corpus uteri","type":"related"},{"name":"malignant germ cell tumour of the corpus uteri","type":"related"}],"termid":"MONDO:0016273","xrefs":{"Monarch":{"xref_id":"0016273"}}}


id: PBO:0081903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 860","termid":"PBO:0081903"}


id: CHEBI:15866
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxy-D-glucose","termid":"CHEBI:15866"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: GO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ecdysteroid catabolic process","synonyms":[{"name":"ecdysteroid breakdown","type":"exact"},{"name":"ecdysteroid catabolism","type":"exact"},{"name":"ecdysteroid degradation","type":"exact"}],"termid":"GO:0046344"}


id: PBO:0080498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor pseudogene 1","termid":"PBO:0080498"}


id: GO:0019636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonoacetate, C2H4PO5, a substance composed of an acetate and a phosphonic acid residue.","definition_xrefs":["MetaCyc:P483-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phosphonoacetate metabolic process","synonyms":[{"name":"phosphonoacetate metabolism","type":"exact"}],"termid":"GO:0019636"}


id: PBO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensor for misfolded ER glycoproteins Yos9 (predicted)","termid":"PBO:0000419"}


id: MONDO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 18","secondary_identifiers":["UMLS:C5394140","OMIM:618811","MEDGEN:1713890","DOID:0070449"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 18","type":"related"},{"name":"MTDPS18","type":"related"}],"termid":"MONDO:0032932","xrefs":{"Monarch":{"xref_id":"0032932"}}}


id: GO:1990679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of an acetyl group from lysine at position 12 of the histone.","definition_xrefs":["PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K12 deacetylation (obsolete GO:1990679)","termid":"GO:1990679"}


id: GO:0014747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tonic skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tonic skeletal muscle contraction","termid":"GO:0014746"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"tonic skeletal muscle contraction","termid":"GO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tonic skeletal muscle contraction","termid":"GO:0014747"}


id: MONDO:1011673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous autoimmune thyroiditis, non-human animal","secondary_identifiers":["OMIA:000097"],"termid":"MONDO:1011673","xrefs":{"Monarch":{"xref_id":"1011673"}}}


id: PBO:0041085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain and CAAX motif containing","termid":"PBO:0041085"}


id: PBO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member G, pseudogene","termid":"PBO:0046983"}


id: PBO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT","termid":"PBO:0002729"}


id: GO:1903481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903481)","synonyms":[{"name":"down regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"inhibition of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"inhibition of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"negative regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903481"}


id: MONDO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chondromyxoid fibroma (obsolete MONDO:0004998)","termid":"MONDO:0004998","xrefs":{"Monarch":{"xref_id":"0004998"}}}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:28293032","PMID:11532397","PMID:25349257","PMID:37804416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","secondary_identifiers":["Reactome:R-HSA-4086400"],"synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: PBO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.1","termid":"PBO:0001496"}


id: GO:0031177
data:
  {"annotated_genes":["SJAG_00869","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59553,65966],"is_not":false,"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphopantetheine binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0031177","terms_by_termid":{"GO:0031177":null}}


id: PBO:0027562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0027562"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: FYECO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which alpha-tocopherol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ alpha-tocopherol","synonyms":[{"name":"vitamin E added","type":"related"}],"termid":"FYECO:0000183"}


id: PR:P40849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:MSY","UniProtKB:P40849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm3","termid":"PR:000025005"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"Spom972h-mfm3","type":"exact"}],"termid":"PR:P40849"}


id: GO:0047394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-(sn-glycero-3-phospho)-1D-myoinositol = 1D-myo-inositol 1-phosphate + glycerol.","definition_xrefs":["MetaCyc:3.1.4.43-RXN","EC:3.1.4.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"glycerophosphoinositol inositolphosphodiesterase activity","secondary_identifiers":["RHEA:14033"],"synonyms":[{"name":"1,2-cyclic-inositol-phosphate phosphodiesterase activity","type":"exact"},{"name":"1-(sn-glycero-3-phospho)-1D-myo-inositol inositolphosphohydrolase activity","type":"related"},{"name":"1-D-myo-inositol-1,2-cyclic-phosphate 2-inositolphosphohydrolase activity","type":"related"},{"name":"D-inositol 1,2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol 1,2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol 1:2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"inositol-1,2-cyclic-phosphate 2-inositolphosphohydrolase activity","type":"related"}],"termid":"GO:0047394"}


id: PBO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 7","termid":"PBO:0072170"}


id: PBO:0077690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 2","termid":"PBO:0077690"}


id: GO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052593)","termid":"GO:0052593"}


id: PBO:0060089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 36","termid":"PBO:0060089"}


id: GO:0033011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A condensed cytoplasmic structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. The perinuclear theca has been considered a cytoskeletal scaffold responsible for maintaining the overall architecture of the mature sperm head; however, recent studies indicate that the bulk of its constituent proteins are not traditional cytoskeletal proteins but rather a variety of cytosolic proteins.","definition_xrefs":["PMID:17289678","PMID:8025156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"perinuclear theca","termid":"GO:0033011"}


id: GO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R2 and R5 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 cell differentiation","termid":"GO:0048054"}


id: MONDO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes involving the chondral tissue (cartilage).","definition_xrefs":["MESH:D002357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articular cartilage disorder","termid":"MONDO:0003816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromalacia","secondary_identifiers":["UMLS:C0085700","ICD10CM:M94.2","ICD9:733.92","DOID:2557","MEDGEN:39328","SCTID:63198006","icd11.foundation:547071520"],"termid":"MONDO:0002342","xrefs":{"Monarch":{"xref_id":"0002342"}}}


id: MONDO:0015171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital enterocyte heparan sulfate deficiency is characterized by massive enteric protein loss, secretory diarrhea, and intolerance to enteral feeds during the first few weeks of life.","definition_xrefs":["Orphanet:103910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital enterocyte heparan sulfate deficiency","secondary_identifiers":["MEDGEN:1373054","GARD:19839","SCTID:725591002","UMLS:C4511238"],"termid":"MONDO:0015171","xrefs":{"Monarch":{"xref_id":"0015171"}}}


id: MONDO:0859192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 4","secondary_identifiers":["UMLS:C5561991","MEDGEN:1794201","OMIM:619538"],"synonyms":[{"name":"cerebral cavernous malformations 4","type":"exact"}],"termid":"MONDO:0859192","xrefs":{"Monarch":{"xref_id":"0859192"}}}


id: PBO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 light intermediate chain 1","termid":"PBO:0045679"}


id: PBO:0055037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2452","termid":"PBO:0055037"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: PBO:0065467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 8 pseudogene 1","termid":"PBO:0065467"}


id: PBO:0058009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3936","termid":"PBO:0058009"}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: PBO:0051574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17C","termid":"PBO:0051574"}


id: PBO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 27","termid":"PBO:0070492"}


id: PBO:0077446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 179","termid":"PBO:0077446"}


id: PBO:0050368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 71","termid":"PBO:0050368"}


id: FYECO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanolamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethanolamine","synonyms":[{"name":"2-aminoethanol added","type":"exact"},{"name":"ETA added","type":"exact"},{"name":"MEA added","type":"exact"},{"name":"monoethanolamine added","type":"exact"}],"termid":"FYECO:0000154"}


id: GO:1902347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["PMID:23893171","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to strigolactone","synonyms":[{"name":"response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902347"}


id: PBO:0028158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_5S_RNA_maturation","termid":"PBO:0028158"}


id: GO:1900887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane biosynthetic process","synonyms":[{"name":"regulation of pentadecane anabolism","type":"exact"},{"name":"regulation of pentadecane biosynthesis","type":"exact"},{"name":"regulation of pentadecane formation","type":"exact"},{"name":"regulation of pentadecane synthesis","type":"exact"}],"termid":"GO:1900887"}


id: PBO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2","termid":"PBO:0060936"}


id: MONDO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial keratitis","termid":"MONDO:0004902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diffuse interstitial keratitis","secondary_identifiers":["ICD9:370.52","MEDGEN:509780","SCTID:17157001","DOID:13353","UMLS:C0155089","icd11.foundation:1750662534"],"termid":"MONDO:0001694","xrefs":{"Monarch":{"xref_id":"0001694"}}}


id: PBO:0075421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 7","termid":"PBO:0075421"}


id: MONDO:0013302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nephronophthisis that has material basis in homozygous or compound heterozygous mutation in the TMEM67 gene on chromosome 8q22.1.","definition_xrefs":["PMID:19508969","DOID:0111118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"},{"relation_name":"is_a","term_name":"Senior-Boichis syndrome","termid":"MONDO:0019394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 11","secondary_identifiers":["GARD:18080","MEDGEN:462146","UMLS:C3150796","OMIM:613550"],"synonyms":[{"name":"NPHP11","type":"exact"},{"name":"nephronophthisis 11","type":"exact"},{"name":"nephronophthisis type 11","type":"exact"}],"termid":"MONDO:0013302","xrefs":{"Monarch":{"xref_id":"0013302"}}}


id: PBO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator ligand","termid":"PBO:0050861"}


id: FYPO:0006956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of deferrichrome measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular deferrichrome level","synonyms":[{"name":"increased cellular deferrichrome level during mitotic cell cycle","type":"related"},{"name":"increased cellular deferrichrome level during vegetative growth","type":"exact"},{"name":"increased cellular deferriferrichrome level","type":"exact"},{"name":"increased deferrichrome accumulation","type":"related"}],"termid":"FYPO:0006956"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: PBO:0057408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548j","termid":"PBO:0057408"}


id: PBO:0068116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 423","termid":"PBO:0068116"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation into metallo-sulfur cluster (obsolete GO:0051221)","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: PBO:0029839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0029839"}


id: GO:1903133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:22898778","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of tube lumen cavitation","termid":"GO:1903132"},{"relation_name":"negatively_regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tube lumen cavitation","synonyms":[{"name":"inhibition of tube lumen cavitation","type":"narrow"}],"termid":"GO:1903133"}


id: MONDO:0016252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare uterine cancer.","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine cancer (obsolete MONDO:0016252)","secondary_identifiers":["Orphanet:213564"],"synonyms":[{"name":"rare cancer of uterus","type":"exact"},{"name":"rare malignant tumor of uterus","type":"exact"},{"name":"rare uterine cancer","type":"exact"},{"name":"rare uterine malignant tumor","type":"exact"}],"termid":"MONDO:0016252","xrefs":{"Monarch":{"xref_id":"0016252"}}}


id: PBO:0113288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA; suppresses frameshifting at stalled ribosomes","termid":"PBO:0113288"}


id: FYPO:0004301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","GO:0051306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic chromosome separation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"related"},{"name":"normal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004301"}


id: GO:0102511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 7-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102511)","termid":"GO:0102511"}


id: PBO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase, unknown biological role","termid":"PBO:0002073"}


id: GO:0030144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors.","definition_xrefs":["EC:2.4.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:16921","Reactome:R-HSA-975916","MetaCyc:2.4.1.155-RXN","Reactome:R-HSA-9696980"],"synonyms":[{"name":"GnTV activity","type":"related"},{"name":"N-acetylglucosaminyltransferase V activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:6-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 6-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:alpha-mannoside-beta-1,6 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine:alpha-mannoside-beta1,6 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-mannoside beta-1->6-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-alpha-mannoside beta1->6-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0030144"}


id: MONDO:0015416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tessier number 5 facial cleft","secondary_identifiers":["GARD:19968","Orphanet:141261","icd11.foundation:2138256187","MEDGEN:609364","UMLS:C0432119"],"termid":"MONDO:0015416","xrefs":{"Monarch":{"xref_id":"0015416"}}}


id: MONDO:0019662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib-polydactyly syndrome","termid":"MONDO:0015461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short rib-polydactyly syndrome, Majewski type","secondary_identifiers":["SCTID:72922008","ICD9:756.3","GARD:4833","icd11.foundation:132740256","Orphanet:93269"],"synonyms":[{"name":"SRPS type 2","type":"related"},{"name":"polydactyly with neonatal chondrodystrophy type 2","type":"related"},{"name":"short rib-polydactyly syndrome Majewski type","type":"related"},{"name":"short rib-polydactyly syndrome type 2","type":"exact"}],"termid":"MONDO:0019662","xrefs":{"Monarch":{"xref_id":"0019662"}}}


id: FYPO:0008244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from the prospore wall.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to prospore wall","termid":"FYPO:0008244"}


id: GO:1903634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:2280766"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine-tRNA ligase activity (obsolete GO:1903634)","synonyms":[{"name":"down regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down regulation of leucine translase activity","type":"exact"},{"name":"down regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of leucine translase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"downregulation of leucine translase activity","type":"exact"},{"name":"downregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of leucine translase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of leucine translase activity","type":"exact"},{"name":"negative regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903634"}


id: GO:1902783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["PMID:23826995","GOC:TermGenie","GOC:mengo_curators","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to decane","termid":"GO:1902782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decane","termid":"GO:1902783"}


id: FYPO:0000089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methyl methanesulfonate. Cells stop growing (and may die) at a concentration of methyl methanesulfonate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methyl methanesulfonate","synonyms":[{"name":"hypersensitive to methyl methanesulfonate","type":"exact"},{"name":"sensitive to MMS","type":"exact"},{"name":"sensitive to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"sensitive to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0000089"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: PBO:0029818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_without_cell_division_(obsolete_FYPO:0002419)","termid":"PBO:0029818"}


id: PBO:0065931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 5","termid":"PBO:0065931"}


id: MONDO:0003081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the thalamus. Causes include brain neoplasms, cerebrovascular disorders, brain trauma, brain hypoxia, infections, and brain hemorrhage. Signs and symptoms include movement and sensory abnormalities, visual abnormalities, ataxia, and coma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thalamic disorder","secondary_identifiers":["UMLS:C0039726","DOID:4662","MEDGEN:52693","NCIT:C85186","MESH:D013786"],"synonyms":[{"name":"disease of dorsal plus ventral thalamus","type":"exact"},{"name":"disease or disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"disorder of dorsal plus ventral thalamus","type":"exact"},{"name":"dorsal plus ventral thalamus disease","type":"exact"},{"name":"dorsal plus ventral thalamus disease or disorder","type":"exact"}],"termid":"MONDO:0003081","xrefs":{"Monarch":{"xref_id":"0003081"}}}


id: PR:P31209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pabp gene.","definition_xrefs":["UniProtKB:P31209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylate-binding protein, cytoplasmic and nuclear (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.04c","synonyms":[{"name":"PABP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pabp","type":"exact"},{"name":"poly(A)-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polyadenylate tail-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31209"}


id: PBO:0087967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of thiamine or related compound; contributes to uptake of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine); shares sequence similarity with Thi7p","termid":"PBO:0087967"}


id: GO:1900810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving helvolic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"helvolic acid metabolic process","synonyms":[{"name":"Fumigacin metabolic process","type":"related"},{"name":"Fumigacin metabolism","type":"related"},{"name":"helvolic acid metabolism","type":"exact"}],"termid":"GO:1900810"}


id: PBO:0055261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2688","termid":"PBO:0055261"}


id: FYPO:0001694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hesperadin. Cells stop growing (and may die) at a concentration of hesperadin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to hesperadin","synonyms":[{"name":"hypersensitive to hesperadin","type":"exact"},{"name":"sensitive to hesperadin during mitotic cell cycle","type":"related"},{"name":"sensitive to hesperadin during vegetative growth","type":"exact"}],"termid":"FYPO:0001694"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


id: MONDO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving acts (real, not simulated) in which the psychological or physical suffering of a victim is sexually exciting to the individual.","definition_xrefs":["NCIT:C94358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual disorder","termid":"MONDO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual sadism disorder","secondary_identifiers":["MEDGEN:19957","ICD10CM:F65.52","ICD9:302.84","MESH:D012448","DOID:10817","UMLS:C0036913","SCTID:59394009"],"synonyms":[{"name":"sexual sadism","type":"exact"}],"termid":"MONDO:0001132","xrefs":{"Monarch":{"xref_id":"0001132"}}}


id: PBO:0047559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 13","termid":"PBO:0047559"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: PBO:0055734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7DN intronic transcript 1","termid":"PBO:0055734"}


id: PBO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha","termid":"PBO:0060430"}


id: GO:0102074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC6-3-hydroxyacyl-CoA = OPC6-trans-2-enoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.17","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC6-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102074)","termid":"GO:0102074"}


id: PBO:0043183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 3","termid":"PBO:0043183"}


id: PBO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18a","termid":"PBO:0036312"}


id: MONDO:0035542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation (obsolete MONDO:0035542)","secondary_identifiers":["Orphanet:573278"],"termid":"MONDO:0035542","xrefs":{"Monarch":{"xref_id":"0035542"}}}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:50308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: PBO:0067468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 597, pseudogene","termid":"PBO:0067468"}


id: MONDO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete horns in sheep (obsolete MONDO:0011111)","secondary_identifiers":["OMIM:601563"],"synonyms":[{"name":"Ho","type":"related"},{"name":"horns in sheep","type":"exact"}],"termid":"MONDO:0011111","xrefs":{"Monarch":{"xref_id":"0011111"}}}


id: PBO:0055983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 1","termid":"PBO:0055983"}


id: MONDO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the lateral ventricle of the brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraventricular meningioma","termid":"MONDO:0002772"},{"relation_name":"is_a","term_name":"cerebral meningioma","termid":"MONDO:0003772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lateral ventricle meningioma","secondary_identifiers":["DOID:6115","MEDGEN:232693","UMLS:C1334380","NCIT:C5302"],"synonyms":[{"name":"meningioma (disease) of telencephalic ventricle","type":"exact"},{"name":"meningioma of lateral ventricle","type":"exact"},{"name":"meningioma of the lateral ventricle","type":"exact"},{"name":"telencephalic ventricle meningioma (disease)","type":"exact"}],"termid":"MONDO:0003775","xrefs":{"Monarch":{"xref_id":"0003775"}}}


id: GO:0061437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of vasculature of the renal system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:11891195","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature development","termid":"GO:0061437"}


id: GO:0048672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting","synonyms":[{"name":"activation of collateral sprouting","type":"narrow"},{"name":"stimulation of collateral sprouting","type":"narrow"},{"name":"up regulation of collateral sprouting","type":"exact"},{"name":"up-regulation of collateral sprouting","type":"exact"},{"name":"upregulation of collateral sprouting","type":"exact"}],"termid":"GO:0048672"}


id: MONDO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endemic bacterial infection caused by Treponema carateum. It is manifested with chronic cutaneous lesions. The early lesions consist of papules and erythematous plaques. The late lesions consist of hypochromic, achromic, hyperpigmented and atrophic lesions. The late skin lesions may cause destruction of bones and cartilage and produce disfiguring changes.","definition_xrefs":["NCIT:C85011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pinta disease","secondary_identifiers":["ICD9:103","ICD9:103.2","DOID:1022","ICD9:103.0","SCTID:22064009","UMLS:C0031946","ICD9:103.3","ICD9:103.9","NORD:1580","ICD9:103.1","MESH:D010874","MEDGEN:45926"],"synonyms":[{"name":"Azul","type":"related"},{"name":"Carate","type":"related"},{"name":"Empeines","type":"related"},{"name":"Lota","type":"related"},{"name":"Mal del pinto","type":"related"},{"name":"Pinta","type":"exact"},{"name":"Tina","type":"related"},{"name":"endemic treponematosis caused by Treponema carateum","type":"related"},{"name":"infection by Treponema carateum","type":"related"},{"name":"pinta","type":"exact"}],"termid":"MONDO:0000979","xrefs":{"Monarch":{"xref_id":"0000979"}}}


id: FYPO:0001350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton in the vegetative growth phase of the life cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["PomBase:mah","GO:0000226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule cytoskeleton organization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule organisation during vegetative growth","type":"related"},{"name":"abnormal microtubule organization during vegetative growth","type":"related"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"microtubule cytoskeleton defects during vegetative growth","type":"exact"},{"name":"microtubule organization defects during vegetative growth","type":"related"}],"termid":"FYPO:0001350"}


id: PBO:0054710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2119","termid":"PBO:0054710"}


id: PBO:0087185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I termination factor; binds to rDNA terminator element, required for efficient Pol I termination; required for rDNA silencing at NTS1; facilities association of Sir2p with NTS1, contributes to rDNA stability and cell longevity; interacts physically with Fob1p and RENT subunits, Sir2p and Net1p; may interact with ribosomes, based on co-purification experiments; Myb-like DNA-binding protein; NSI1 has a paralog, REB1, that arose from the whole genome duplication","termid":"PBO:0087185"}


id: GO:0102867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + MoO2-molybdopterin cofactor(2-) + L-cysteine = thio-molybdenum cofactor + L-alanine + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum cofactor sulfurtransferase activity (obsolete GO:0102867)","termid":"GO:0102867"}


id: PBO:0085464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted tail-anchored plasma membrane protein; contains conserved CYSTM module; related proteins in other organisms may be involved in response to stress; N- and C-terminal fusion proteins localize to the cell periphery; YDR034W-B has a paralog, YBR056W-A, that arose from the whole genome duplication","termid":"PBO:0085464"}


id: GO:0008176
data:
  {"annotated_genes":["SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73352],"is_not":false,"summary":null,"term":"GO:0008176"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine46 in tRNA + S-adenosyl-L-methionine = N7-methylguanosine46 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0140098","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tRNA (guanine(46)-N7)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.1.33","MetaCyc:TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN","Reactome:R-HSA-6782286"],"synonyms":[{"name":"7-methylguanine transfer ribonucleate methylase activity","type":"broad"},{"name":"N7-methylguanine methylase activity","type":"broad"},{"name":"tRNA (guanine(46)-N7-)-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N7-)-methyltransferase activity","type":"broad"},{"name":"tRNA (guanosine(46)-N(7))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(46)-N7)-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(46)-N7-)-methyltransferase activity","type":"exact"},{"name":"tRNA guanine 7-methyltransferase activity","type":"broad"}],"termid":"GO:0008176","terms_by_termid":{"GO:0008176":null}}


id: GO:0035429
data:
  {"annotated_genes":["SJAG_04920","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[89390],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which gluconate is transported across a membrane. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015725"],"synonyms":[{"name":"gluconate membrane transport","type":"exact"},{"name":"gluconate transport","type":"related"}],"termid":"GO:0035429","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: PBO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 19 pseudogene","termid":"PBO:0070105"}


id: PBO:0085440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polynucleotide kinase present on rDNA; required for efficient transcription termination by RNA polymerase I; functions with Las1p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; required for cell growth; mRNA is cell-cycle regulated","termid":"PBO:0085440"}


id: GO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:curators","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respirasome (obsolete GO:0005746)","synonyms":[{"name":"mitochondrial electron transport chain","type":"exact"},{"name":"mitochondrial respiratory chain","type":"exact"},{"name":"mitochondrial respiratory chain supercomplex","type":"exact"},{"name":"mitochondrial respiratory supercomplex","type":"exact"}],"termid":"GO:0005746"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: PBO:0047456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc mu receptor","termid":"PBO:0047456"}


id: PBO:0109188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0109188"}


id: GO:0042881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-galactonate, the D-enantiomer of galactonate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:jsg","ISBN:0198506732","GOC:mtg_transport","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"D-galactonate transmembrane transporter activity","termid":"GO:0042881"}


id: GO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in mammals that transfers tail-anchored (TA) proteins from SGTA to GET3 (ASNA1/TRC4) for targeting to the endoplasmic reticulum membrane. Also chaperones polypeptides from the endoplasmic reticulum retrotranslocation machinery to the proteasome, maintaining the solubility of substrates to improve ER-associated protein degradation (ERAD). Consists of BAG6 (BAT3) and its cofactors GET4 (TRC35) and UBL4A.","definition_xrefs":["GOC:bm","PMID:20676083","PMID:21636303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"BAT3 complex","synonyms":[{"name":"BAG6-UBL4A-TRC35 complex","type":"exact"},{"name":"BAT3-TRC35-UBL4A complex","type":"related"},{"name":"Bag6 complex","type":"exact"}],"termid":"GO:0071818"}


id: MONDO:0022754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 17.","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Smith-Magenis syndrome","termid":"MONDO:0008434"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p deletion","secondary_identifiers":["MEDGEN:1842221","icd11.foundation:527787991","UMLS:C5679671","GARD:20817","MESH:C538045","Orphanet:261965"],"synonyms":[{"name":"17p deletion","type":"related"},{"name":"17p monosomy","type":"related"},{"name":"17p- syndrome","type":"related"},{"name":"chromosome 17p deletion","type":"exact"},{"name":"chromosome 17p deletion syndrome","type":"related"},{"name":"del(17p)","type":"related"},{"name":"deletion 17p","type":"related"},{"name":"deletion 17p syndrome","type":"related"},{"name":"interstitial deletion 17p","type":"related"},{"name":"loss of chromosome 17p","type":"related"},{"name":"monosomy 17p","type":"related"},{"name":"partial deletion of chromosome 17p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy 17p","type":"related"},{"name":"partial monosomy of chromosome 17p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type 17","type":"exact"}],"termid":"MONDO:0022754","xrefs":{"Monarch":{"xref_id":"0022754"}}}


id: MONDO:0700091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly consists of the presence of a ring chromosome. A ring chromosome is a chromosome whose arms have fused together to form a ring, often with the loss of the ends of the chromosome.","definition_xrefs":["NCIT:C3360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome disorder","secondary_identifiers":["MESH:D012303"],"synonyms":[{"name":"supernumerary circular chromosome","type":"exact"}],"termid":"MONDO:0700091","xrefs":{"Monarch":{"xref_id":"0700091"}}}


id: PR:O43032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03939","PANTHER:PTHR11564:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit alpha homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.03","secondary_identifiers":["UniProtKB:O43032"],"synonyms":[{"name":"DP-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SR-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPR","type":"exact"},{"name":"docking protein alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43032"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: PBO:0083704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0083704"}


id: PBO:0074563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 17","termid":"PBO:0074563"}


id: GO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte proliferation","termid":"GO:0010838"}


id: PBO:0075153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 9","termid":"PBO:0075153"}


id: MONDO:0018405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare male infertility due to hypothalamic-pituitary-gonadal axis disorder that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to hypothalamic-pituitary-gonadal axis disorder of genetic origin (obsolete MONDO:0018405)","secondary_identifiers":["Orphanet:399983"],"synonyms":[{"name":"genetic rare male infertility due to hypothalamic-pituitary-gonadal axis disorder","type":"exact"},{"name":"rare male infertility due to gonadotropic axis disorder of genetic origin","type":"exact"},{"name":"rare male infertility due to hypothalamic-pituitary-testicular axis disorder of genetic origin","type":"exact"}],"termid":"MONDO:0018405","xrefs":{"Monarch":{"xref_id":"0018405"}}}


id: GO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The adenylylation of peptidyl-threonine to form peptidyl-O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine adenylylation (obsolete GO:0018178)","synonyms":[{"name":"peptidyl-threonine adenylation","type":"exact"}],"termid":"GO:0018178"}


id: PBO:0089432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1","termid":"PBO:0089432"}


id: GO:0060534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage development","termid":"GO:0060534"}


id: GO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"physiological cardiac muscle hypertrophy","termid":"GO:0003301"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth involved in cardiac muscle cell development","synonyms":[{"name":"cardiac muscle cell hypertrophy","type":"related"},{"name":"cardiomyocyte growth","type":"related"},{"name":"heart muscle cell growth","type":"related"}],"termid":"GO:0061049"}


id: PBO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 7","termid":"PBO:0044141"}


id: PBO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked non-specific mental retardation","termid":"PBO:0001530"}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["PMID:9593693","RHEA:31495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9851347","EC:2.4.1.274","MetaCyc:RXN-12119"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: PBO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coding overlap with adjacent gene","termid":"PBO:0001756"}


id: PBO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 5","termid":"PBO:0051675"}


id: GO:0034281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-isokaurene + diphosphate.","definition_xrefs":["PMID:17141283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ent-isokaurene synthase activity","termid":"GO:0034281"}


id: MONDO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition related to a disturbance between proper intake and utilization of nourishment.","definition_xrefs":["NCIT:C26836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"excluded_subClassOf","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional disorder","secondary_identifiers":["DOID:374","UMLS:C3714509","ICD9:783.9","EFO:0001069","MEDGEN:811347","MESH:D009748","SCTID:2492009"],"synonyms":[{"name":"nutrition disease","type":"related"},{"name":"nutritional disorder","type":"exact"}],"termid":"MONDO:0005137","xrefs":{"Monarch":{"xref_id":"0005137"}}}


id: PBO:0080512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP actin nucleation promoting factor","termid":"PBO:0080512"}


id: PBO:0085342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p; acts downstream of Mss4p in a pathway regulating actin cytoskeleton organization in response to stress; TORC2 complex substrate and effector; protein abundance increases in response to DNA replication stress; SLM1 has a paralog, SLM2, that arose from the whole genome duplication","termid":"PBO:0085342"}


id: PBO:0064916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 5","termid":"PBO:0064916"}


id: GO:0031685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"adenosine receptor binding","synonyms":[{"name":"adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031685"}


id: MONDO:0010924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"D-2-hydroxyglutaric aciduria (D-2-HGA) is a rare clinically variable neurological form of 2-hydroxyglutaric aciduria characterized biochemically by elevated D-2-hydroxyglutaric acid (D-2-HG) in the urine, plasma and cerebrospinal fluid.","definition_xrefs":["Orphanet:79315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutaric aciduria","termid":"MONDO:0016001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"D-2-hydroxyglutaric aciduria","secondary_identifiers":["DOID:0050575","MEDGEN:322192","OMIMPS:600721","UMLS:C1833429","SCTID:237960000","icd11.foundation:1170122566","GARD:5661"],"synonyms":[{"name":"D-2-HGA","type":"exact"},{"name":"D-2-hydroxyglutaric acidemia","type":"exact"},{"name":"D-2-hydroxyglutaric aciduria 1","type":"related"},{"name":"D-2-hydroxyglutaric aciduria type 1","type":"exact"},{"name":"D2HA","type":"related"},{"name":"D2HGA","type":"related"}],"termid":"MONDO:0010924","xrefs":{"Monarch":{"xref_id":"0010924"}}}


id: MONDO:0012154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","secondary_identifiers":["GARD:9937","MEDGEN:324696","MESH:C536105","OMIM:608908","UMLS:C1837148"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: PBO:0113752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase (predicted by Pfam-N)","termid":"PBO:0113752"}


id: MONDO:0008081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis, type IV, of Riccardi","secondary_identifiers":["MESH:C537392","UMLS:C0220695","OMIM:162270","MEDGEN:67393"],"synonyms":[{"name":"NF4","type":"related"},{"name":"Nf 4","type":"related"},{"name":"neurofibromatosis type 4","type":"exact"},{"name":"neurofibromatosis type IV","type":"exact"},{"name":"neurofibromatosis, atypical","type":"related"},{"name":"neurofibromatosis, type IV, of RICCARDI","type":"related"},{"name":"neurofibromatosis, type IV, of Riccardi","type":"exact"},{"name":"neurofibromatosis, variant form(S) of","type":"related"},{"name":"type IV neurofibromatosis of Riccardi","type":"exact"}],"termid":"MONDO:0008081","xrefs":{"Monarch":{"xref_id":"0008081"}}}


id: MONDO:0013974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 6, hair/nail type","secondary_identifiers":["DOID:0111659","GARD:18064","MEDGEN:767025","OMIM:614928","UMLS:C3554111"],"synonyms":[{"name":"ECTD6","type":"exact"},{"name":"ectodermal dysplasia 6, hair/nail type","type":"exact"}],"termid":"MONDO:0013974","xrefs":{"Monarch":{"xref_id":"0013974"}}}


id: GO:0140856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-13 residue.","definition_xrefs":["PMID:28624371","PMID:22980979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0004842","GO:0019787","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H2AK13 ubiquitin ligase activity","synonyms":[{"name":"histone ubiquitin ligase activity (H2A-K13 specific)","type":"exact"}],"termid":"GO:0140856"}


id: RO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"before_or_simultaneous_with","termid":"RO:0002081"}


id: GO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein L-aspartate + 2-oxoglutarate + O2 = protein 3-hydroxy-L-aspartate + succinate + CO2.","definition_xrefs":["PMID:1378441","PMID:1856229","RHEA:11508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"peptidyl-aspartic acid 3-dioxygenase activity","secondary_identifiers":["GO:0004597","EC:1.14.11.16","Reactome:R-HSA-9631355","MetaCyc:PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"],"synonyms":[{"name":"aspartate beta-hydroxylase activity","type":"related"},{"name":"aspartyl/asparaginyl beta-hydroxylase activity","type":"related"},{"name":"aspartylpeptide beta-dioxygenase activity","type":"related"},{"name":"peptide-L-aspartate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"peptide-aspartate beta-dioxygenase activity","type":"exact"}],"termid":"GO:0062101"}


id: PBO:0085822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels","termid":"PBO:0085822"}


id: GO:0045451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0044085"],"is_obsolete":false,"name":"pole plasm oskar mRNA localization","synonyms":[{"name":"establishment and maintenance of oskar mRNA localization in pole plasm","type":"exact"},{"name":"establishment and maintenance of pole plasm oskar mRNA localization","type":"exact"},{"name":"oocyte pole plasm oskar mRNA localization","type":"exact"},{"name":"pole plasm oskar mRNA localisation","type":"exact"}],"termid":"GO:0045451"}


id: FYPO:0006778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the septin ring does not associate with the prospore membrane during prospore membrane formation and closure. Normally, the septin ring forms in close association with the assembling prospore membrane.","definition_xrefs":["PomBase:mah","PMID:20123972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"prospore formation with septin ring dissociated from prospore membrane","synonyms":[{"name":"forespore formation with septin ring dissociated from FSM","type":"exact"},{"name":"forespore formation with septin ring dissociated from forespore membrane","type":"exact"},{"name":"prospore septin ring dissociated from prospore membrane","type":"exact"},{"name":"septin ring separated from FSM","type":"exact"}],"termid":"FYPO:0006778"}


id: MONDO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by intellectual deficit, choroideremia, acrokeratosis verruciformis, anhidrosis, and skeletal deformities. It has been observed in a single kindred. The syndrome is transmitted as an X-linked recessive trait and may be caused by a small X-chromosome deletion.","definition_xrefs":["Orphanet:3417"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acrokeratoderma (obsolete MONDO:0019271)","termid":"MONDO:0019271"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van den Bosch syndrome","secondary_identifiers":["MEDGEN:162920","UMLS:C0796192","OMIM:314500","GARD:5453","SCTID:733110004","MESH:C563129"],"synonyms":[{"name":"mental deficiency, choroideremia, acrokeratosis verruciformis,anhidrosis, skeletal deformity","type":"related"},{"name":"van den Bosch syndrome","type":"exact"}],"termid":"MONDO:0010754","xrefs":{"Monarch":{"xref_id":"0010754"}}}


id: GO:1990214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16840699","PMID:22233353"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host protein levels (obsolete GO:1990214)","termid":"GO:1990214"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PR:Q9UTM9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fap2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.04c","synonyms":[{"name":"Spom972h-fap2","type":"exact"}],"termid":"PR:Q9UTM9"}


id: MONDO:0006104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carotid body paraganglioma that is confined to the site of origin, without metastatic potential.","definition_xrefs":["NCIT:C79950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"carotid body paraganglioma","termid":"MONDO:0021053"},{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign carotid body paraganglioma","secondary_identifiers":["MEDGEN:396868","UMLS:C2698359","EFO:1000108"],"synonyms":[{"name":"benign carotid body paraganglioma","type":"exact"},{"name":"benign chemodectoma","type":"related"},{"name":"carotid body paraganglioma, benign","type":"exact"},{"name":"chemodectoma, benign","type":"related"}],"termid":"MONDO:0006104","xrefs":{"Monarch":{"xref_id":"0006104"}}}


id: PBO:0087153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease; required for maturation of the RNA component of RNase MRP; functions redundantly with Rnh70p and Rex2p in processing of U5 snRNA and RNase P RNA; member of RNase D family of exonucleases","termid":"PBO:0087153"}


id: PBO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.169","termid":"PBO:0004962"}


id: PBO:0067200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 265, pseudogene","termid":"PBO:0067200"}


id: MONDO:0016870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 5","secondary_identifiers":["GARD:20793","UMLS:C5679649","MEDGEN:1825959","Orphanet:261786"],"synonyms":[{"name":"partial deletion of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5","type":"exact"}],"termid":"MONDO:0016870","xrefs":{"Monarch":{"xref_id":"0016870"}}}


id: GO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell fate commitment","termid":"GO:0072148"}


id: GO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"hepoxilin metabolic process","termid":"GO:0051121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hepoxilin biosynthetic process","synonyms":[{"name":"hepoxilin anabolism","type":"exact"},{"name":"hepoxilin biosynthesis","type":"exact"},{"name":"hepoxilin formation","type":"exact"},{"name":"hepoxilin synthesis","type":"exact"}],"termid":"GO:0051122"}


id: MONDO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by mucinous columnar epithelial cells.","definition_xrefs":["NCIT:C4512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"},{"relation_name":"is_a","term_name":"mucinous cystadenoma","termid":"MONDO:0006859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous ovarian cystadenoma","secondary_identifiers":["MEDGEN:91088","SCTID:119422004","UMLS:C0346172","DOID:3267"],"synonyms":[{"name":"benign mucinous cystadenoma of ovary","type":"exact"},{"name":"benign mucinous cystadenoma of the ovary","type":"exact"},{"name":"benign ovarian mucinous cystadenoma","type":"exact"},{"name":"mucinous cystadenoma of ovary","type":"exact"},{"name":"mucinous cystadenoma of the ovary","type":"exact"},{"name":"ovarian mucinous cystadenoma","type":"exact"},{"name":"ovary mucinous cystadenoma","type":"exact"}],"termid":"MONDO:0002583","xrefs":{"Monarch":{"xref_id":"0002583"}}}


id: PBO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211","termid":"PBO:0005552"}


id: MONDO:1012369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cystadenocarcinoma and nodular dermatofibrosis, non-human animal","termid":"MONDO:1011815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal cystadenocarcinoma and nodular dermatofibrosis, dog","secondary_identifiers":["OMIA:001335-9615"],"termid":"MONDO:1012369","xrefs":{"Monarch":{"xref_id":"1012369"}}}


id: PBO:0066970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 272","termid":"PBO:0066970"}


id: MONDO:0022430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiopulmonary disorder characterized by systemic arterial hypoxemia secondary to pulmonary hypertension and extrapulmonary right to left shunting across the foramen ovale and ductus arteriosus.","definition_xrefs":["NCIT:C85006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent fetal circulation syndrome","secondary_identifiers":["SCTID:35604006","UMLS:C0031190","MEDGEN:45824","MESH:D010547","SCTID:206597007","SCTID:233815004","EFO:1001103"],"synonyms":[{"name":"PPHN","type":"exact"},{"name":"persistent fetal circulation","type":"exact"},{"name":"persistent foetal circulation","type":"exact"},{"name":"persistent pulmonary hypertension of the newborn","type":"exact"}],"termid":"MONDO:0022430","xrefs":{"Monarch":{"xref_id":"0022430"}}}


id: GO:0010615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"}


id: GO:2000652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"regulation of secondary cell wall biogenesis","synonyms":[{"name":"regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"regulation of secondary cell wall anabolism","type":"related"},{"name":"regulation of secondary cell wall biosynthetic process","type":"related"},{"name":"regulation of secondary cell wall formation","type":"related"},{"name":"regulation of secondary cell wall synthesis","type":"related"}],"termid":"GO:2000652"}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: PBO:0080389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS18 core subunit of CORVET and HOPS complexes","termid":"PBO:0080389"}


id: MONDO:0858926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that is characterized by developmental delay, hypotrophy, and dysmorphic features and that has material basis in homozygous ultra-rare REV3L variant (T2753R).","definition_xrefs":["DOID:0081264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay, hypotrophy, and dysmorphic features without moebius syndrome","termid":"MONDO:0858926","xrefs":{"Monarch":{"xref_id":"0858926"}}}


id: PR:Q96WW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-1,3/1,6-mannosyltransferase ALG2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02884","PANTHER:PTHR12526:SF22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3/1,6-mannosyltransferase alg2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.01","secondary_identifiers":["UniProtKB:Q96WW6"],"synonyms":[{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG2","type":"exact"},{"name":"asparagine-linked glycosylation protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WW6"}


id: GO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"neural crest formation","termid":"GO:0014029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest formation","termid":"GO:0090299"}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: MONDO:0009682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, congenital, with rapid progression","secondary_identifiers":["MEDGEN:338135","UMLS:C1850840","MESH:C564983","OMIM:254100"],"synonyms":[{"name":"muscular dystrophy, congenital, with rapid progression","type":"exact"}],"termid":"MONDO:0009682","xrefs":{"Monarch":{"xref_id":"0009682"}}}


id: PBO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 3","termid":"PBO:0045043"}


id: GO:0010498
data:
  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id: PBO:0063039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 6","termid":"PBO:0063039"}


id: MONDO:1011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile idiopathic epilepsy, non-human animal","secondary_identifiers":["OMIA:001757"],"termid":"MONDO:1011637","xrefs":{"Monarch":{"xref_id":"1011637"}}}


id: PBO:0072981
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 3A member 2","termid":"PBO:0072981"}


id: MONDO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ribbing disease is a rare bone disease that causes bony growths on the long bones, such as the thigh bone and shine bone.Ribbing diseaseaffects women more frequently than men. The most common symptom is pain. A single studyof 14 patients found an association between Ribbing disease and impaired exercise tolerance and changes in heart function (i.e., increased prevalence of arrhythmia and changes in left ventricular systolic and diastolic function).The cause of the condition iscurrently unknown, although some cases appear to be genetic and inherited in an autosomal recessive fashion.Optimal treatment for the disease is largely unknown. There have been case reports describingtreatment of Ribbing diseasewith bisphosphonate pamidronate. Results have been mixed. The conditionoften resolves on its own; howevercases of progressive disease have been described.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribbing disease","secondary_identifiers":["MESH:C537613","OMIM:601477","MEDGEN:321923","UMLS:C1832273"],"synonyms":[{"name":"diaphyseal sclerosis, multiple","type":"related"},{"name":"hereditary multiple diaphyseal sclerosis","type":"related"},{"name":"multiple diaphyseal sclerosis","type":"related"},{"name":"ribbing disease","type":"exact"}],"termid":"MONDO:0011092","xrefs":{"Monarch":{"xref_id":"0011092"}}}


id: FYPO:0001801
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype in which a cell is unable to survive at a high temperature at which wild-type cells survive.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell at high temperature (obsolete FYPO:0001801)","synonyms":[{"name":"lethal in cell at high temperature","type":"exact"}],"termid":"FYPO:0001801"}


id: MONDO:1010830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radial hemimelia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial hemimelia, non-human animal","termid":"MONDO:1010162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial hemimelia, domestic cat","secondary_identifiers":["OMIA:002225-9685"],"termid":"MONDO:1010830","xrefs":{"Monarch":{"xref_id":"1010830"}}}


id: MONDO:0011434
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 5, susceptibility to","secondary_identifiers":["MEDGEN:347660","UMLS:C1858536","OMIM:604316","DOID:0111282"],"synonyms":[{"name":"PSORS5","type":"exact"},{"name":"psoriasis 5, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 5","type":"exact"}],"termid":"MONDO:0011434","xrefs":{"Monarch":{"xref_id":"0011434"}}}


id: MONDO:0012730
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 6","secondary_identifiers":["OMIM:611788","MEDGEN:435866","GARD:15527","UMLS:C2673186","MESH:C567085"],"synonyms":[{"name":"AAT6","type":"related"},{"name":"ACTA2 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 6","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 6","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in ACTA2","type":"exact"},{"name":"familial thoracic aortic aneurysm with livedo reticularis and iris flocculi","type":"related"}],"termid":"MONDO:0012730","xrefs":{"Monarch":{"xref_id":"0012730"}}}


id: MONDO:0020049
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly involves an autosome.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal anomaly","secondary_identifiers":["UMLS:C5681496","MEDGEN:1843454","Orphanet:98127","GARD:19417"],"synonyms":[{"name":"autosome chromosomal anomaly","type":"exact"},{"name":"chromosomal anomaly of autosome","type":"exact"}],"termid":"MONDO:0020049","xrefs":{"Monarch":{"xref_id":"0020049"}}}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: PBO:0087579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex (APC); APC is an E3 ubiquitin ligase that regulates the metaphase-anaphase transition and exit from mitosis; required for activation of the daughter-specific gene expression and spore wall maturation","termid":"PBO:0087579"}


id: GO:2000480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of AMPK","type":"related"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"negative regulation of PKA","type":"related"},{"name":"negative regulation of PKA C","type":"related"},{"name":"negative regulation of STK22","type":"related"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000480"}


id: MONDO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolapse of lacrimal gland","secondary_identifiers":["SCTID:84777002","UMLS:C0155231","ICD9:375.16","DOID:11134","MEDGEN:509860"],"synonyms":[{"name":"dislocation of lacrimal gland","type":"exact"}],"termid":"MONDO:0001203","xrefs":{"Monarch":{"xref_id":"0001203"}}}


id: MONDO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone disease that results in formation or resorption abnormalities located in bone.","definition_xrefs":["DOID:0080005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone remodeling disease","termid":"MONDO:0000833","xrefs":{"Monarch":{"xref_id":"0000833"}}}


id: MONDO:0012662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the WHRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 2","termid":"MONDO:0016484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 2D","secondary_identifiers":["OMIM:611383","DOID:0110840","GARD:15514","ICD10CM:H35.5","MEDGEN:292821","UMLS:C1568249"],"synonyms":[{"name":"USH2D","type":"exact"},{"name":"USHER syndrome, type IID","type":"related"},{"name":"Usher syndrome caused by mutation in WHRN","type":"exact"},{"name":"Usher syndrome type 2D","type":"exact"},{"name":"Usher syndrome type IID","type":"exact"},{"name":"Usher syndrome, type 2D","type":"related"},{"name":"WHRN Usher syndrome","type":"exact"}],"termid":"MONDO:0012662","xrefs":{"Monarch":{"xref_id":"0012662"}}}


id: GO:0010684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tricyclic triterpenoid compounds, terpenoids with six isoprene units and 3 rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid catabolic process","synonyms":[{"name":"tricyclic triterpenoid catabolism","type":"exact"}],"termid":"GO:0010684"}


id: GO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein translocon complex at the chloroplast outer membrane.","definition_xrefs":["PMID:10646606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Toc complex","termid":"GO:0010006"}


id: GO:0032008
data:
  {"annotated_genes":["SJAG_00209","SJAG_03371","SJAG_02605","SJAG_00457","SJAG_02231","SJAG_03907","SJAG_05184","SJAG_04496","SJAG_00561","SJAG_03405","SJAG_02424","SJAG_00143","SJAG_04910","SJAG_06588","SJAG_03089","SJAG_05030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70926,74769],"is_not":false,"summary":null,"term":"GO:0032008"},{"annotations":[78215,78554,74294,110116,87765,77675,95596,75762,93797,77164,112451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[97253,106547,90665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03907":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of TOR signaling pathway","type":"narrow"},{"name":"positive regulation of TOR signaling cascade","type":"related"},{"name":"positive regulation of TOR signaling pathway","type":"exact"},{"name":"positive regulation of TOR signalling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signalling pathway","type":"exact"},{"name":"stimulation of TOR signaling pathway","type":"narrow"},{"name":"up regulation of TOR signaling pathway","type":"exact"},{"name":"up-regulation of TOR signaling pathway","type":"exact"},{"name":"upregulation of TOR signaling pathway","type":"exact"}],"termid":"GO:0032008","terms_by_termid":{"GO:0032008":null,"GO:1904263":null,"GO:1904515":null}}


id: GO:0141222
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103726],"is_not":false,"summary":null,"term":"GO:0141222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + NAD+ + H2O = histone H3 L-lysine (position 14) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K4 to NAD, producing nicotinamide.","definition_xrefs":["PMID:23771057","PMID:20299449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0019213","GO:0033558","GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141222","terms_by_termid":{"GO:0141222":null}}


id: PBO:0067755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 54","termid":"PBO:0067755"}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["PMID:12571227","GOC:mah","PMID:15709772"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdopterin synthase complex (obsolete GO:0019008)","synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: GO:0102035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylpropanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = (2E)-2-methylpropenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:3988734"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylpropanoyl-CoA dehydrogenase activity (obsolete GO:0102035)","termid":"GO:0102035"}


id: GO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in conjugation with cellular fusion (obsolete GO:0071512)","synonyms":[{"name":"MAPK import into nucleus involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, MAPK import into nucleus","type":"exact"},{"name":"conjugation with cellular fusion, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in conjugation with cellular fusion","type":"narrow"},{"name":"nuclear translocation of MAPK involved in mating response","type":"related"}],"termid":"GO:0071512"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:1.1.99.25-RXN","EC:1.1.5.8","KEGG_REACTION:R01873"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: PBO:0011493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin Cnt5","termid":"PBO:0011493"}


id: PATO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000465 marked (obsolete PATO:0000465)","termid":"PATO:0000465"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72029,72374],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["PMID:15935758","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


id: MONDO:0017473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"patella aplasia/hypoplasia","termid":"MONDO:0008205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"patella aplasia/hypoplasia, bilateral","secondary_identifiers":["Orphanet:295041"],"termid":"MONDO:0017473","xrefs":{"Monarch":{"xref_id":"0017473"}}}


id: PBO:0044663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 5","termid":"PBO:0044663"}


id: PBO:0035901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035901"}


id: MONDO:0020812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The result of pathological changes in the hard tissue of a tooth caused by carious lesions, mechanical factors, or trauma, which render the pulp susceptible to bacterial invasion from the external environment.","definition_xrefs":["MESH:D003789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exposure, dental pulp","secondary_identifiers":["MEDGEN:41473","UMLS:C0011406"],"synonyms":[{"name":"DENT PULP EXPOSURE","type":"related"},{"name":"Dental Pulp Exposure","type":"related"},{"name":"EXPOSURE DENT PULP","type":"related"},{"name":"Exposure of tooth pulp","type":"related"},{"name":"Exposure, Dental Pulp","type":"related"},{"name":"PULP EXPOSURE DENT","type":"related"},{"name":"Pulp Exposure, Dental","type":"related"}],"termid":"MONDO:0020812","xrefs":{"Monarch":{"xref_id":"0020812"}}}


id: PBO:0070201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 126 pseudogene","termid":"PBO:0070201"}


id: MONDO:0000502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features. It may also arise in the urinary bladder, urethra, and vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villous adenoma","secondary_identifiers":["MESH:D018253","MEDGEN:60206","UMLS:C0206674","DOID:0050869","NCIT:C7399","ICDO:8261/0"],"synonyms":[{"name":"villous adenoma","type":"exact"}],"termid":"MONDO:0000502","xrefs":{"Monarch":{"xref_id":"0000502"}}}


id: GO:1902001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fatty acid is transported across a membrane.","definition_xrefs":["PMID:9395310","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fatty acid transmembrane transport","termid":"GO:1902001"}


id: MONDO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"segmental dystonia","termid":"MONDO:0000479"},{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"adult-onset segmental dystonia","synonyms":[{"name":"DYT-GNAL","type":"exact"},{"name":"an adult-onset, focal or segmental, isolated dystonia that is characterised by cervical or cranial dystonia that often begins in the fourth decade (range 7-54 years).","type":"exact"},{"name":"an adult-onset, focal or segmental, isolated dystonia that is characterized by cervical or cranial dystonia that often begins in the fourth decade (range 7-54 years).","type":"exact"}],"termid":"MONDO:0100015","xrefs":{"Monarch":{"xref_id":"0100015"}}}


id: PBO:0028983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PBO:0036063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036063"}


id: GO:0102785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 O2 = 2 5,6-epoxy-3-hydroxy-9-apo-beta-caroten-9-one + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz","PMID:11316814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"violaxanthin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7886"],"termid":"GO:0102785"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-191972","Reactome:R-HSA-192065","Reactome:R-HSA-192178","Reactome:R-HSA-5602885"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0064231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 1","termid":"PBO:0064231"}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: MONDO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the ocular adnexa.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region","termid":"MONDO:0002022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eye adnexa disorder","secondary_identifiers":["UMLS:C1290855","SCTID:118941004","DOID:0050815","EFO:0009546","ICD10WHO:H00-H06","MEDGEN:713201"],"synonyms":[{"name":"disease of ocular adnexa","type":"exact"},{"name":"disease or disorder of ocular adnexa","type":"exact"},{"name":"disorder of ocular adnexa","type":"exact"},{"name":"ocular adnexa disease","type":"exact"},{"name":"ocular adnexa disease or disorder","type":"exact"}],"termid":"MONDO:0000462","xrefs":{"Monarch":{"xref_id":"0000462"}}}


id: PATO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resemblance to a cube (a 3-D shape with a square cross section).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"square","termid":"PATO:0000413"},{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuboid","synonyms":[{"name":"block-like","type":"related"},{"name":"cuboidal","type":"exact"}],"termid":"PATO:0001872"}


id: GO:0019774
data:
  {"annotated_genes":["SJAG_04229","SJAG_00128","SJAG_04888","SJAG_04541","SJAG_01014","SJAG_03151","SJAG_04969"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57262,57456,61836,62327,64431,65324,71183],"is_not":false,"summary":null,"term":"GO:0019774"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:rb","GOC:jl","GOC:mtg_sensu","PMID:10854779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_01014":null,"SJAG_03151":null,"SJAG_04229":null,"SJAG_04541":null,"SJAG_04888":null,"SJAG_04969":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome core complex, beta-subunit complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"termid":"GO:0019774","terms_by_termid":{"GO:0019774":null}}


id: PBO:0056508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-binding lectin family member 3, pseudogene","termid":"PBO:0056508"}


id: PBO:0081703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 624","termid":"PBO:0081703"}


id: PBO:0039046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL5 antisense RNA 1","termid":"PBO:0039046"}


id: PBO:0068123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 430","termid":"PBO:0068123"}


id: PBO:0083716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; contains 3 calcium and lipid binding domains; mRNA is targeted to bud; TCB2 has a paralog, TCB1, that arose from the whole genome duplication","termid":"PBO:0083716"}


id: SO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wyosine","secondary_identifiers":["RNAMOD:041"],"synonyms":[{"name":"IMG","type":"exact"}],"termid":"SO:0001336"}


id: MONDO:0016834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p11.2p12.2 microduplication syndrome is a rare chromosomal anomaly syndrome resulting from the partial duplication of the short arm of chromosome 16 with a highly variable phenotype typically characterized by developmental/psychomotor delay (particularly of speech), intellectual disability, autism spectrum disorder and/or obsessive and repetitive behavior, behavioral problems (such as aggression and outbursts), dysmorphic facial features (triangular face, deep set eyes, broad and prominent nasal bridge, upslanting or narrow palpebral features, hypertelorism). Additionally, finger/hand anomalies, short stature, microcephaly and slender build are frequently described.","definition_xrefs":["Orphanet:261204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p11.2p12.2 microduplication syndrome","secondary_identifiers":["DECIPHER:96","MEDGEN:1377902","DECIPHER:78","GARD:20772","SCTID:733518000","UMLS:C4518821"],"synonyms":[{"name":"16p11.2 microduplication syndrome","type":"exact"},{"name":"16p11.2-p12.2 microduplication syndrome","type":"exact"},{"name":"dup(16)(p11.2p12.2)","type":"exact"},{"name":"trisomy 16p11.2p12.2","type":"exact"}],"termid":"MONDO:0016834","xrefs":{"Monarch":{"xref_id":"0016834"}}}


id: FYPO:0004104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable spherical vegetative cell","synonyms":[{"name":"inviable spherical cell","type":"exact"},{"name":"inviable spherical cell during vegetative growth","type":"exact"},{"name":"inviable spherical vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spherical vegetative cell","type":"exact"},{"name":"spherical inviable cell","type":"exact"}],"termid":"FYPO:0004104"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["GO_REF:0000071","PMID:10998501","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: PBO:0066807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 106","termid":"PBO:0066807"}


id: MONDO:0015874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ductal tumor of breast","secondary_identifiers":["Orphanet:180284"],"termid":"MONDO:0015874","xrefs":{"Monarch":{"xref_id":"0015874"}}}


id: PBO:0040540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 6","termid":"PBO:0040540"}


id: PBO:0038433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetoacetyl-CoA synthetase pseudogene 1","termid":"PBO:0038433"}


id: GO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin biosynthetic process (obsolete GO:0034217)","synonyms":[{"name":"ascospore wall chitin anabolism","type":"exact"},{"name":"ascospore wall chitin biosynthesis","type":"exact"},{"name":"ascospore wall chitin formation","type":"exact"},{"name":"ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034217"}


id: GO:0060392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the SMAD protein signaling pathway.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SMAD protein signal transduction","termid":"GO:0060390"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"SMAD protein signal transduction","termid":"GO:0060395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SMAD protein signal transduction","synonyms":[{"name":"negative regulation of SMAD protein import into nucleus","type":"narrow"},{"name":"negative regulation of SMAD protein nuclear translocation","type":"narrow"}],"termid":"GO:0060392"}


id: PBO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.6","termid":"PBO:0002629"}


id: GO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.","definition_xrefs":["PMID:16903353","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell junction","termid":"GO:0044156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasmodesma","termid":"GO:0044219"}


id: GO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated by tyrosine phosphorylation events.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IA (obsolete GO:0004432)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA","type":"exact"}],"termid":"GO:0004432"}


id: GO:1904606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a fat cell.","definition_xrefs":["PMID:17024416","GO_REF:0000085","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell apoptotic process","synonyms":[{"name":"adipocyte apoptosis","type":"narrow"},{"name":"adipocyte apoptotic process","type":"exact"},{"name":"adipose cell apoptosis","type":"narrow"},{"name":"adipose cell apoptotic process","type":"exact"},{"name":"fat cell apoptosis","type":"narrow"}],"termid":"GO:1904606"}


id: GO:0007224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened.","definition_xrefs":["GOC:mah","PMID:15205520","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway","secondary_identifiers":["Wikipedia:Hedgehog_signaling_pathway"],"synonyms":[{"name":"Shh signaling pathway","type":"related"},{"name":"Sonic hedgehog signaling pathway","type":"narrow"},{"name":"hedgehog signaling pathway","type":"exact"},{"name":"hh signaling pathway","type":"narrow"},{"name":"hh signalling pathway","type":"narrow"},{"name":"smoothened signalling pathway","type":"exact"}],"termid":"GO:0007224"}


id: GO:0140415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"},{"relation_name":"is_a","term_name":"symbiont-mediated response to host defenses","termid":"GO:0052200"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host process by symbiont","termid":"GO:0140418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host defenses by symbiont","synonyms":[{"name":"effector-mediated modulation of host defenses by symbiont","type":"exact"}],"termid":"GO:0140415"}


id: PBO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D, Pld1","termid":"PBO:0000461"}


id: PR:Q9UTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf2 gene.","definition_xrefs":["UniProtKB:Q9UTR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.06","synonyms":[{"name":"Spom972h-rgf2","type":"exact"}],"termid":"PR:Q9UTR5"}


id: GO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"rhythmic synaptic transmission","termid":"GO:0060024"}


id: FYPO:0005301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PomBase:mah","PMID:26697368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"increased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005301"}


id: PBO:0013126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase","termid":"PBO:0013126"}


id: PBO:0049417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2G, pseudogene","termid":"PBO:0049417"}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","secondary_identifiers":["Reactome:R-HSA-159854"],"termid":"GO:0017187"}


id: GO:0071295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","termid":"GO:0071295"}


id: GO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"},{"relation_name":"is_a","term_name":"polyadenylation-dependent ncRNA catabolic process","termid":"GO:0043634"},{"relation_name":"is_a","term_name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent rRNA catabolic process","synonyms":[{"name":"cytoplasmic poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0035760"}


id: GO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + ATP + bicarbonate = ADP + 2 H+ + oxalosuccinate + phosphate.","definition_xrefs":["EC:6.4.1.7","RHEA:20425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"2-oxoglutarate carboxylase activity","secondary_identifiers":["MetaCyc:RXN-8457","KEGG_REACTION:R08201"],"synonyms":[{"name":"CFI","type":"related"},{"name":"OGC","type":"related"},{"name":"carboxylating factor for ICDH","type":"related"},{"name":"oxalosuccinate synthetase activity","type":"related"}],"termid":"GO:0034029"}


id: SO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulon defined by considering one regulatory gene product.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulon","termid":"SO:1001284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_regulon","synonyms":[{"name":"simple regulon","type":"exact"}],"termid":"SO:0002302"}


id: MONDO:0012748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAH11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 7","secondary_identifiers":["DOID:0110605","GARD:15533","UMLS:C2678473","MESH:C567504","OMIM:611884","MEDGEN:394834"],"synonyms":[{"name":"CILD7","type":"exact"},{"name":"DNAH11 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 7","type":"related"},{"name":"ciliary dyskinesia, primary, 7, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 7","type":"exact"},{"name":"primary ciliary dyskinesia 7","type":"exact"},{"name":"primary ciliary dyskinesia 7 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAH11","type":"exact"},{"name":"primary ciliary dyskinesia type 7","type":"exact"}],"termid":"MONDO:0012748","xrefs":{"Monarch":{"xref_id":"0012748"}}}


id: PR:Q10480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.08","synonyms":[{"name":"SpNUC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pnu1","type":"exact"}],"termid":"PR:Q10480"}


id: PBO:0052118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 1","termid":"PBO:0052118"}


id: PBO:0040468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 2","termid":"PBO:0040468"}


id: MOD:01709
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01709"}


id: GO:0043182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting sodium ions into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sequestering","termid":"GO:0043181"},{"relation_name":"part_of","term_name":"intracellular sodium ion homeostasis","termid":"GO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0098771"],"is_obsolete":false,"name":"vacuolar sequestering of sodium ion","synonyms":[{"name":"sequestering of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sequestration of sodium ion (Na+) in vacuole","type":"exact"},{"name":"sodium ion (Na+) retention in vacuole","type":"exact"},{"name":"sodium ion (Na+) storage in vacuole","type":"exact"},{"name":"vacuolar sequestering of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sequestration of sodium ion (Na+)","type":"exact"},{"name":"vacuolar sodium ion (Na+) retention","type":"exact"},{"name":"vacuolar sodium ion (Na+) storage","type":"exact"}],"termid":"GO:0043182"}


id: GO:0014874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"},{"relation_name":"part_of","term_name":"regulation of muscle adaptation","termid":"GO:0043502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014874"}


id: GO:1902020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:TermGenie","GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cilium-dependent cell motility","synonyms":[{"name":"down regulation of ciliary cell motility","type":"exact"},{"name":"down-regulation of ciliary cell motility","type":"exact"},{"name":"downregulation of ciliary cell motility","type":"exact"},{"name":"inhibition of ciliary cell motility","type":"narrow"},{"name":"negative regulation of ciliary cell motility","type":"related"},{"name":"negative regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902020"}


id: GO:0030603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oxaloacetate = acetate + H+ + oxalate.","definition_xrefs":["RHEA:24432","EC:3.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"oxaloacetase activity","secondary_identifiers":["MetaCyc:OXALOACETASE-RXN","KEGG_REACTION:R00338"],"synonyms":[{"name":"oxalacetic hydrolase activity","type":"related"},{"name":"oxaloacetate acetylhydrolase activity","type":"related"}],"termid":"GO:0030603"}


id: MONDO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CDKL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"atypical Rett syndrome","termid":"MONDO:0017746"},{"relation_name":"is_a","term_name":"CDKL5 disorder","termid":"MONDO:0100039"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 2","secondary_identifiers":["MESH:C564064","GARD:18617","MEDGEN:1663579","OMIM:300672","UMLS:C4750718","Orphanet:505652","DOID:0080467"],"synonyms":[{"name":"CDKL5 early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE2","type":"exact"},{"name":"EIEE2","type":"exact"},{"name":"developmental and epileptic encephalopathy 2, X-linked dominant","type":"exact"},{"name":"developmental and epileptic encephalopathy, 2","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CDKL5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 2","type":"exact"},{"name":"infantile spasm syndrome, X-linked 2","type":"related"}],"termid":"MONDO:0010396","xrefs":{"Monarch":{"xref_id":"0010396"}}}


id: PBO:0079523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane immune signaling adaptor TYROBP","termid":"PBO:0079523"}


id: GO:0160181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of piperine.","definition_xrefs":["PMID:33833371","PMID:33435446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"piperine biosynthetic process","termid":"GO:0160181"}


id: PBO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-67 (pseudogene)","termid":"PBO:0051111"}


id: PR:O94263
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12708:SF0","PRO:DNx","OMA:SCHPO03798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.14c","secondary_identifiers":["UniProtKB:O94263"],"synonyms":[{"name":"DNA polymerase II subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE2","type":"exact"}],"termid":"PR:O94263"}


id: PBO:0006199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target","termid":"PBO:0006199"}


id: GO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to D-lactate and ammonia.","definition_xrefs":["MetaCyc:ALACAT2-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-alanine oxidation to D-lactate and ammonia","termid":"GO:0019479"}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: GO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antifungal peptide production","termid":"GO:0002788"}


id: PBO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 9","termid":"PBO:0072007"}


id: GO:0031958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a corticosteroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11027914","PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated corticosteroid signaling pathway","synonyms":[{"name":"corticosteroid receptor signalling pathway","type":"broad"},{"name":"intracellular corticosteroid receptor signaling pathway","type":"exact"}],"termid":"GO:0031958"}


id: MONDO:0859317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB2, autosomal recessive","secondary_identifiers":["UMLS:C5774255","MEDGEN:1824028","OMIM:620125"],"termid":"MONDO:0859317","xrefs":{"Monarch":{"xref_id":"0859317"}}}


id: PBO:0074855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 43","termid":"PBO:0074855"}


id: PBO:0089895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron/zinc ion transmembrane transporter","termid":"PBO:0089895"}


id: GO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cumulus cell differentiation","synonyms":[{"name":"regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045592"}


id: FYPO:0001260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to hypoxia","synonyms":[{"name":"normal RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"normal RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"normal RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"normal mRNA level during cellular response to hypoxia","type":"narrow"},{"name":"normal transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001260"}


id: FYPO:0002198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable vegetative cell population with abnormal cell shape (obsolete FYPO:0002198)","synonyms":[{"name":"viable, abnormally shaped vegetative cell population","type":"exact"}],"termid":"FYPO:0002198"}


id: GO:0032963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen metabolic process","synonyms":[{"name":"collagen metabolism","type":"exact"}],"termid":"GO:0032963"}


id: FYPO:0001605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cytosol","synonyms":[{"name":"decreased cytosolic level of substance","type":"exact"},{"name":"decreased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in cytosol during vegetative growth","type":"exact"},{"name":"reduced level of substance in cytosol","type":"exact"}],"termid":"FYPO:0001605"}


id: MONDO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary hemangioma arising from the eyelid.","definition_xrefs":["NCIT:C4357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"eyelid capillary hemangioma","secondary_identifiers":["SCTID:231828003","UMLS:C0339110","MEDGEN:87379"],"synonyms":[{"name":"capillary angioma of eyelid","type":"exact"},{"name":"capillary angioma of lid","type":"exact"},{"name":"capillary angioma of the eyelid","type":"exact"},{"name":"capillary angioma of the lid","type":"exact"},{"name":"capillary hemangioma of eyelid","type":"exact"},{"name":"capillary hemangioma of lid","type":"exact"},{"name":"capillary hemangioma of the eyelid","type":"exact"},{"name":"capillary hemangioma of the lid","type":"exact"},{"name":"eyelid capillary angioma","type":"exact"},{"name":"eyelid capillary hemangioma","type":"exact"}],"termid":"MONDO:0021627","xrefs":{"Monarch":{"xref_id":"0021627"}}}


id: GO:0043228
data:
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id: PBO:0087181
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id: GO:0140375
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id: PR:O43069
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id: GO:0000918
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id: PBO:0004122
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id: PBO:0087018
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id: GO:0090446
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id: PBO:0065436
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id: PBO:0083477
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id: MONDO:0016987
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id: GO:0050458
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id: MONDO:0023180
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id: PBO:0042573
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id: PBO:0090969
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id: PBO:0055917
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id: GO:0004229
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id: MONDO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular coloboma-cleft palate-hallux valgus syndrome is characterized by the association of bilateral macular coloboma, cleft palate, and hallux valgus. It has been described in a brother and sister. Pelvic, limb and digital anomalies were also reported. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:91494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular coloboma-cleft palate-hallux valgus syndrome","secondary_identifiers":["SCTID:722463001","UMLS:C1857619","MESH:C565686","OMIM:216800","MEDGEN:341812","GARD:16802"],"synonyms":[{"name":"coloboma of macula and skeletal anomalies","type":"related"}],"termid":"MONDO:0009001","xrefs":{"Monarch":{"xref_id":"0009001"}}}


id: PBO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR96","termid":"PBO:0016920"}


id: PBO:0042805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase","termid":"PBO:0042805"}


id: MONDO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 4","secondary_identifiers":["MEDGEN:374849","OMIM:608437","UMLS:C1842057"],"synonyms":[{"name":"SLEB4","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012036","xrefs":{"Monarch":{"xref_id":"0012036"}}}


id: MONDO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, short stature, and limb abnormalities","secondary_identifiers":["Orphanet:572773","UMLS:C4539873","GARD:18655","MEDGEN:1613834","OMIM:617604","DOID:0081431"],"synonyms":[{"name":"MISSLA","type":"related"},{"name":"microcephaly, short stature, and limb abnormalities","type":"exact"}],"termid":"MONDO:0060533","xrefs":{"Monarch":{"xref_id":"0060533"}}}


id: PBO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cell_wall-degrading_enzymes","termid":"PBO:0030614"}


id: PBO:0028996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_arginine_import","termid":"PBO:0028996"}


id: PBO:0072874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyl transferase like 1","termid":"PBO:0072874"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: GO:0005480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0005480)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0005480"}


id: PBO:0068263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N5","termid":"PBO:0068263"}


id: PBO:0051244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-65-1 (pseudogene)","termid":"PBO:0051244"}


id: PR:G2TRJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam1 gene.","definition_xrefs":["UniProtKB:G2TRJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.19","synonyms":[{"name":"Spom972h-tam1","type":"exact"},{"name":"transcripts altered in meiosis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ4"}


id: PBO:0089296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase (APRT) Apt1","termid":"PBO:0089296"}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:19730411","GOC:BHF","GOC:sjp","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: PBO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 52","termid":"PBO:0071050"}


id: GO:0051996
data:
  {"annotated_genes":["SJAG_02719"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78267],"is_not":false,"summary":null,"term":"GO:0051996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2E,6E)-farnesyl diphosphate + H+ + NAD(P)H = 2 diphosphate + NAD(P)+ + squalene.","definition_xrefs":["EC:2.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02719":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"squalene synthase [NAD(P)H] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN66-281"],"synonyms":[{"name":"farnesyl-diphosphate farnesyltransferase activity","type":"narrow"},{"name":"farnesyltransferase activity","type":"broad"},{"name":"presqualene synthase activity","type":"exact"},{"name":"presqualene-diphosphate synthase activity","type":"exact"},{"name":"squalene synthase activity","type":"exact"},{"name":"squalene synthetase activity","type":"related"}],"termid":"GO:0051996","terms_by_termid":{"GO:0051996":null}}


id: PBO:0064290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B1","termid":"PBO:0064290"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PMID:34352089","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: PR:P41889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00544","PANTHER:PTHR12558:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit cut9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.15c","secondary_identifiers":["UniProtKB:P41889"],"synonyms":[{"name":"20S cyclosome/APC complex protein cut9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC16","type":"exact"},{"name":"cell untimely torn protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41889"}


id: MONDO:1011599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 diabetes mellitus that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 1 diabetes mellitus, non-human animal","termid":"MONDO:1011401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus, chimpanzee","secondary_identifiers":["OMIA:000283-9598"],"termid":"MONDO:1011599","xrefs":{"Monarch":{"xref_id":"1011599"}}}


id: MONDO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rotor syndrome (RT) is a benign, inherited liver disorder characterized by chronic, predominantly conjugated, nonhemolytic hyperbilirubinemia with normal liver histology.","definition_xrefs":["Orphanet:3111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Rotor syndrome","secondary_identifiers":["GARD:218","MEDGEN:67435","SCTID:32891000","OMIM:237450","MedDRA:10039234","UMLS:C0220991","icd11.foundation:1965776012"],"synonyms":[{"name":"HBLRR","type":"related"},{"name":"Rotor syndrome","type":"exact"},{"name":"Rotor-type hyperbilirubinemia","type":"related"},{"name":"hyperbilirubinemia, ROTOR type","type":"related"},{"name":"hyperbilirubinemia, Rotor type","type":"exact"},{"name":"hyperbilirubinemia, rotor type, digenic","type":"exact"}],"termid":"MONDO:0009379","xrefs":{"Monarch":{"xref_id":"0009379"}}}


id: MONDO:0011213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pierpont syndrome is a rare subcutaneous tissue disorder characterized by axial hypotonia after birth, prolonged feeding difficulties, moderate to severe global developmental delay, seizures (in particular absence seizures), fetal digital pads, distinctive plantar fat pads anteromedial to the heels, deep palmar and plantar grooves. Additionally, distinct craniofacial dysmorphic features, notably a broad face with high forehead, high anterior hairline, narrow palpebral fissures that take on a crescent moon shape when smiling, broad nasal bridge and tip with anteverted nostrils, mild midfacial hypoplasia, long, smooth philtrum, thin upper lip vermillion, small, widely spaced teeth and flat occiput/microcephaly/brachycephaly, are also chararteristic. Over time, fat pads may become less prominent and disappear.","definition_xrefs":["Orphanet:487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"Pierpont syndrome","secondary_identifiers":["GARD:17885","DOID:0081362","MEDGEN:356049","MESH:C566559","OMIM:602342","UMLS:C1865644"],"synonyms":[{"name":"PIERPONT syndrome","type":"related"},{"name":"PRPTS","type":"related"},{"name":"Pierpont syndrome","type":"exact"},{"name":"plantar lipomatosis, unusual facies, and developmental delay","type":"related"},{"name":"plantar lipomatosis-facial dysmorphism-developmental delay syndrome","type":"exact"},{"name":"plantar lipomatosis-unusual facies-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0011213","xrefs":{"Monarch":{"xref_id":"0011213"}}}


id: PBO:0073380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 and spectrin domain containing 1","termid":"PBO:0073380"}


id: FYPO:0006554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nucleus during nitrogen starvation","synonyms":[{"name":"normal protein localisation to nucleus during nitrogen starvation","type":"exact"},{"name":"normal protein localization to nucleus during nitrogen depletion","type":"exact"},{"name":"normal protein localization to nucleus during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006554"}


id: PBO:0027971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sulfite_reductase_activity","termid":"PBO:0027971"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["GOC:krc","PMID:29991750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0061024","GO:0008150","GO:0006810","GO:0044085"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: MONDO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian disease characterized by the presence of microcephaly and intracranial calcifications at birth accompanied by neurological delay, seizures and a clinical course similar to that seen in patients after intrauterine infection with Toxoplasma gondii, Rubella, Cytomegalovirus, Herpes simplex (so-called TORCH syndrome), or other agents, despite repeated tests revealing the absence of any known infectious agent.","definition_xrefs":["Orphanet:1229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome","secondary_identifiers":["DOID:0050656","GARD:12426","MEDGEN:483678","OMIMPS:251290","SCTID:722390006","UMLS:C3489725"],"synonyms":[{"name":"BLC-PMG","type":"exact"},{"name":"BLCPMG","type":"related"},{"name":"Baraitser Brett Piesowicz syndrome","type":"related"},{"name":"Baraitser-Brett-Piesowicz syndrome","type":"exact"},{"name":"Baraitser-Reardon syndrome","type":"exact"},{"name":"band-like calcification with simplified gyration and polymicrogyria","type":"exact"},{"name":"bilateral band-like calcification with polymicrogyria","type":"exact"},{"name":"congenital intrauterine infection-like syndrome","type":"related"},{"name":"microcephaly - intracranial calcification - intellectual disability","type":"related"},{"name":"microcephaly intracranial calcification","type":"related"},{"name":"microcephaly-intracranial calcification-intellectual disability syndrome","type":"exact"},{"name":"pseudo-TORCH syndrome","type":"exact"}],"termid":"MONDO:0009626","xrefs":{"Monarch":{"xref_id":"0009626"}}}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: GO:0047029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + (R)-3-(4-hydroxyphenyl)lactate = NADPH + H+ + 3-(4-hydroxyphenyl)pyruvate.","definition_xrefs":["RHEA:52692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-4-hydroxyphenyllactate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-7632"],"synonyms":[{"name":"aromatic 2-oxoacid reductase activity","type":"broad"},{"name":"hydroxyphenylpyruvate reductase activity","type":"broad"},{"name":"phenylpyruvate reductase activity","type":"related"}],"termid":"GO:0047029"}


id: MONDO:0009895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-dental and vertebral anomalies syndrome is a rare, genetic, developmental defect during embryogenesis syndrome characterized by postaxial polydactyly and other abnormalities of the hands and feet (e.g. brachydactyly, broad toes), hypoplasia and fusion of the vertebral bodies, as well as dental abnormalities (fused teeth, macrodontia, hypodontia, short roots). There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly-dental and vertebral anomalies syndrome","secondary_identifiers":["MESH:C564880","GARD:16614","OMIM:263540","UMLS:C1849732","MEDGEN:342342"],"synonyms":[{"name":"polydactyly, postaxial, with dental and vertebral anomalies","type":"related"}],"termid":"MONDO:0009895","xrefs":{"Monarch":{"xref_id":"0009895"}}}


id: MONDO:0011846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bulimia nervosa","termid":"MONDO:0005452"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa, susceptibility to, 1","secondary_identifiers":["OMIM:607499","MEDGEN:334832","UMLS:C1843776"],"synonyms":[{"name":"BN","type":"related"},{"name":"BULN","type":"related"},{"name":"BULN1","type":"exact"},{"name":"BULN2","type":"related"},{"name":"anorexia nervosa, susceptibility to, 2","type":"related"},{"name":"bulimia nervosa, susceptibility to","type":"broad"},{"name":"bulimia nervosa, susceptibility to, 1","type":"exact"},{"name":"bulimia nervosa, susceptibility to, 2","type":"exact"},{"name":"bulimia nervosa, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to bulimia nervosa 2","type":"exact"}],"termid":"MONDO:0011846","xrefs":{"Monarch":{"xref_id":"0011846"}}}


id: _global:results_in_acquisition_of_features_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship that links a specified entity with the process that results in an unspecified entity acquiring the features and characteristics of the specified entity","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_acquisition_of_features_of","secondary_identifiers":["RO:0002315","GOREL:0001014"],"synonyms":[{"name":"results in differentiation of","type":"exact"}],"termid":"_global:results_in_acquisition_of_features_of"}


id: MOD:01653
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride.","definition_xrefs":["Unimod:139","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dansyl chloride derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"Dansyl (Dns)","type":"exact"},{"name":"DansylRes","type":"exact"}],"termid":"MOD:01653"}


id: GO:0099699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic membrane (obsolete GO:0099699)","termid":"GO:0099699"}


id: MONDO:0006105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells of the conjunctiva without malignant characteristics.","definition_xrefs":["NCIT:C3622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign conjunctival neoplasm","secondary_identifiers":["EFO:1000110","UMLS:C0154025","MEDGEN:56328","SCTID:92068002"],"synonyms":[{"name":"benign conjunctiva neoplasm","type":"exact"},{"name":"benign conjunctiva tumor","type":"exact"},{"name":"benign conjunctiva tumour","type":"exact"},{"name":"benign conjunctival neoplasm","type":"exact"},{"name":"benign conjunctival tumor","type":"exact"},{"name":"benign conjunctival tumour","type":"exact"},{"name":"benign neoplasm of conjunctiva","type":"exact"},{"name":"benign neoplasm of the conjunctiva","type":"exact"},{"name":"benign tumor of conjunctiva","type":"exact"},{"name":"benign tumor of the conjunctiva","type":"exact"},{"name":"benign tumour of conjunctiva","type":"exact"},{"name":"benign tumour of the conjunctiva","type":"exact"},{"name":"conjunctiva benign neoplasm","type":"exact"}],"termid":"MONDO:0006105","xrefs":{"Monarch":{"xref_id":"0006105"}}}


id: MONDO:0004546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the lumbar nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"},{"relation_name":"is_a","term_name":"nerve plexus neoplasm","termid":"MONDO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"lumbar plexus neoplasm","secondary_identifiers":["NCIT:C5824","MEDGEN:272802","UMLS:C1334437","DOID:8389"],"synonyms":[{"name":"lumbar nerve plexus neoplasm","type":"exact"},{"name":"lumbar nerve plexus neoplasm (disease)","type":"exact"},{"name":"lumbar nerve plexus tumor","type":"exact"},{"name":"lumbar nerve plexus tumour","type":"exact"},{"name":"lumbar plexus neoplasms","type":"exact"},{"name":"lumbar plexus tumor","type":"exact"},{"name":"lumbar plexus tumour","type":"exact"},{"name":"neoplasm of lumbar nerve plexus","type":"exact"},{"name":"neoplasm of lumbar plexus","type":"exact"},{"name":"neoplasm of the lumbar plexus","type":"exact"},{"name":"tumor of lumbar nerve plexus","type":"exact"},{"name":"tumor of lumbar plexus","type":"exact"},{"name":"tumor of the lumbar plexus","type":"exact"},{"name":"tumour of lumbar nerve plexus","type":"exact"},{"name":"tumour of lumbar plexus","type":"exact"},{"name":"tumour of the lumbar plexus","type":"exact"}],"termid":"MONDO:0004546","xrefs":{"Monarch":{"xref_id":"0004546"}}}


id: MONDO:0023561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Koone-Rizzo-Elias syndrome","secondary_identifiers":["MESH:C537023","UMLS:C2931397","MEDGEN:419791"],"synonyms":[{"name":"Koone Rizzo Elias syndrome","type":"related"},{"name":"ichthyosis, intellectual disability and asymptomatic spasticity","type":"related"},{"name":"ichthyosis, mental retardation and asymptomatic spasticity","type":"related"}],"termid":"MONDO:0023561","xrefs":{"Monarch":{"xref_id":"0023561"}}}


id: PBO:0117123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM29 antisense RNA 1","termid":"PBO:0117123"}


id: MONDO:0008565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thyroglossal duct cyst (TDC) is a very rare inherited form of TDC characterized by a mass measuring 3 cm in diameter or less in the midline area of the neck.","definition_xrefs":["Orphanet:93953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"thyroglossal duct cyst","termid":"MONDO:0006460"},{"relation_name":"is_a","term_name":"thyroid tumor","termid":"MONDO:0015074"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial thyroglossal duct cyst","secondary_identifiers":["GARD:5204","OMIM:188455","SCTID:717331000","MESH:C536909","MEDGEN:501211","UMLS:C3495590"],"synonyms":[{"name":"hereditary thyroglossal duct cyst","type":"exact"},{"name":"hereditary thyroglossal duct cysts","type":"related"},{"name":"thyroglossal duct cyst, familial","type":"related"},{"name":"thyroglossal duct cysts","type":"related"},{"name":"thyroglossal duct cysts familial","type":"related"}],"termid":"MONDO:0008565","xrefs":{"Monarch":{"xref_id":"0008565"}}}


id: GO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which formate is converted to CO2.","definition_xrefs":["MetaCyc:PWY-1881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate oxidation","synonyms":[{"name":"formic acid oxidation","type":"exact"}],"termid":"GO:0015944"}


id: PR:Q9P6Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.10","synonyms":[{"name":"Spom972h-med11","type":"exact"},{"name":"mediator complex subunit 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q0"}


id: FYPO:0008311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body during prophase of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body during meiosis I","termid":"FYPO:0004764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during prophase I","termid":"FYPO:0008311"}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: GO:0010064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of embryonic shoot are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic shoot morphogenesis","synonyms":[{"name":"primary shoot system morphogenesis","type":"exact"}],"termid":"GO:0010064"}


id: PBO:0080813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 3","termid":"PBO:0080813"}


id: PBO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisF","termid":"PBO:0013080"}


id: GO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045810"],"synonyms":[{"name":"down regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down regulation of frizzled signaling pathway","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down-regulation of frizzled signaling pathway","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"downregulation of frizzled signaling pathway","type":"exact"},{"name":"inhibition of Wnt receptor signaling pathway","type":"narrow"},{"name":"inhibition of frizzled signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030178"}


id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25675505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: PBO:0073857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A6","termid":"PBO:0073857"}


id: PBO:0059242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L13","termid":"PBO:0059242"}


id: MOD:00964
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine epsilon amino to imine + 12 amu","synonyms":[{"name":"N6-(methylidene)-lysine","type":"exact"}],"termid":"MOD:00964"}


id: GO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"haustorium","termid":"GO:0085035"}


id: PBO:0074404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 2B","termid":"PBO:0074404"}


id: PBO:0051276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-6","termid":"PBO:0051276"}


id: MONDO:1012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, sheep","secondary_identifiers":["OMIA:002053-9940"],"termid":"MONDO:1012505","xrefs":{"Monarch":{"xref_id":"1012505"}}}


id: GO:0052606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chlorophyllide a + NADPH + O2 + 2 H+ = 7-hydroxychlorophyllide a + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-7676"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide a oxygenase activity (obsolete GO:0052606)","synonyms":[{"name":"chlorophyll a oxygenase activity","type":"exact"}],"termid":"GO:0052606"}


id: MONDO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3c","secondary_identifiers":["DOID:0081019","GARD:15459","UMLS:C2750404","MEDGEN:412956","OMIM:609384","MESH:C567666"],"synonyms":[{"name":"CFEOM3C","type":"exact"},{"name":"Feom4 locus","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 3C","type":"related"}],"termid":"MONDO:0012262","xrefs":{"Monarch":{"xref_id":"0012262"}}}


id: SO:1000103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000103 sequence_variant_decreasing_level_of_translation_product (obsolete SO:1000103)","synonyms":[{"name":"mutationdecreasing level of translation product","type":"related"},{"name":"sequence variant decreasing level of translation product","type":"exact"}],"termid":"SO:1000103"}


id: PBO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_model_of","termid":"PBO:0034205"}


id: PBO:0059166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like","termid":"PBO:0059166"}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: MONDO:0026170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system malformation (obsolete MONDO:0026170)","secondary_identifiers":["Orphanet:183506"],"termid":"MONDO:0026170","xrefs":{"Monarch":{"xref_id":"0026170"}}}


id: PBO:0066509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX5 antisense RNA 1","termid":"PBO:0066509"}


id: PBO:0042429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37, HSP90 cochaperone","termid":"PBO:0042429"}


id: PBO:0089316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate cleavage peptidase Icp55","termid":"PBO:0089316"}


id: PBO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: PBO:0028720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_size","termid":"PBO:0028720"}


id: PBO:0003753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Byr2","termid":"PBO:0003753"}


id: GO:0097248
data:
  {"annotated_genes":["SJAG_01017","SJAG_00030","SJAG_01738","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93500,99693,104193,110438],"is_not":false,"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex of a cell tip, and is prevented from moving elsewhere. The cell cortex of a cell tip is the region directly beneath the plasma membrane at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["PMID:19646873","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell cortex","termid":"GO:0032065"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097248","terms_by_termid":{"GO:0097248":null}}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: FYPO:0005899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is normal (i.e. indistinguishable from wild type). Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["GO:0030048","PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin filament-based movement","synonyms":[{"name":"normal rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"normal rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005899"}


id: GO:0006670
data:
  {"annotated_genes":["SJAG_02706","SJAG_04178","SJAG_01057","SJAG_02429","SJAG_02305","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80699,96406,109287,75460,78627,105539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["ISBN:0198506732","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"sphingosine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"(4E)-sphing-4-enine metabolic process","type":"exact"},{"name":"(4E)-sphing-4-enine metabolism","type":"exact"},{"name":"sphing-4-enine metabolic process","type":"exact"},{"name":"sphing-4-enine metabolism","type":"exact"},{"name":"sphingosine metabolism","type":"exact"}],"termid":"GO:0006670","terms_by_termid":{"GO:0046512":null}}


id: MONDO:0015560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic mast cell leukemia (obsolete MONDO:0015560)","secondary_identifiers":["Orphanet:158796"],"termid":"MONDO:0015560","xrefs":{"Monarch":{"xref_id":"0015560"}}}


id: GO:1903832
data:
  {"annotated_genes":["SJAG_02292","SJAG_02331"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68112,71107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to amino acid starvation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:7623840","PMID:25002487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02292":null,"SJAG_02331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to amino acid starvation","references_by_uniquename":{"GO_REF:0000117":null},"termid":"GO:1903832","terms_by_termid":{"GO:1903833":null}}


id: GO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behaviour of an organism as a result of an acetic acid pain stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral response to chemical pain","termid":"GO:0061366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to acetic acid induced pain","termid":"GO:0061367"}


id: PBO:0003656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein kinase Cdk1/Cdc2","termid":"PBO:0003656"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: PBO:0044979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 32 (putative)","termid":"PBO:0044979"}


id: PBO:0042024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 82","termid":"PBO:0042024"}


id: PBO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2 (predicted)","termid":"PBO:0031889"}


id: PBO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 1","termid":"PBO:0045770"}


id: PR:O74363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sqs1 gene.","definition_xrefs":["UniProtKB:O74363","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch and R3H domain-containing protein C30B4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.02c","synonyms":[{"name":"Spom972h-sqs1","type":"exact"}],"termid":"PR:O74363"}


id: PBO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus end tracking protein","termid":"PBO:0001335"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: GO:0086085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an SA cardiomyocyte with an atrial cardiomyocyte and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"cell adhesive protein binding involved in SA cardiac muscle cell-atrial cardiac muscle cell communication","synonyms":[{"name":"cell adhesive protein binding involved in SA cardiomyocyte-atrial cardiomyocyte communication","type":"exact"}],"termid":"GO:0086085"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04818","PANTHER:PTHR11599:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: MONDO:0005964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the sphenoid sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinusitis","secondary_identifiers":["MESH:D015524","EFO:0007489","SCTID:13266007","MEDGEN:11543","DOID:10794","NCIT:C35031","UMLS:C0037886"],"synonyms":[{"name":"sinusitis of sphenoid bone","type":"exact"},{"name":"sphenoid bone sinusitis","type":"exact"},{"name":"sphenoidal sinusitis","type":"exact"}],"termid":"MONDO:0005964","xrefs":{"Monarch":{"xref_id":"0005964"}}}


id: MONDO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intellectual disability that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic intellectual disability","secondary_identifiers":["DOID:0050889"],"synonyms":[{"name":"isolated intellectual disability","type":"exact"},{"name":"nonsyndromic intellectual disability","type":"exact"}],"termid":"MONDO:0000509","xrefs":{"Monarch":{"xref_id":"0000509"}}}


id: GO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methylthiopropyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 3-methylthiopropyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080066)","termid":"GO:0080066"}


id: PBO:0044754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX39B antisense RNA 1","termid":"PBO:0044754"}


id: PBO:0065539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and tensin homolog","termid":"PBO:0065539"}


id: PBO:0026723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcript_length","termid":"PBO:0026723"}


id: PBO:0082542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein of unknown function; localizes to the cytoplasm; deletion improves xylose fermentation in industrially engineered strains; YLR042C is not an essential gene","termid":"PBO:0082542"}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: PBO:0091789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP2","termid":"PBO:0091789"}


id: PR:Q09765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-activating enzyme E1 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10953:SF6","OMA:SCHPO00177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-activating enzyme E1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.12c","secondary_identifiers":["UniProtKB:Q09765"],"synonyms":[{"name":"Spom972h-UBA3","type":"exact"},{"name":"ubiquitin-activating enzyme E1 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09765"}


id: GO:0098527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a somatic muscle cell, such as those found in nematodes and arthropods.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of somatic muscle","termid":"GO:0098527"}


id: PBO:0040176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartoacylase","termid":"PBO:0040176"}


id: MONDO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary fibrous tumor characterized by the presence of areas of abrupt transition to high grade sarcoma.","definition_xrefs":["NCIT:C79948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solitary fibrous tumor","termid":"MONDO:0016238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedifferentiated solitary fibrous tumor","secondary_identifiers":["EFO:1000214","MEDGEN:396654","UMLS:C2699572"],"termid":"MONDO:0006178","xrefs":{"Monarch":{"xref_id":"0006178"}}}


id: PBO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: MONDO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic inflammation of the nasal cavity mucosa. It may lead to post-nasal drip resulting in chronic sore throat and chronic cough.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhinitis","termid":"MONDO:0003014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic rhinitis","secondary_identifiers":["ICD9:472.0","NCIT:C34479","icd11.foundation:1346915097","MEDGEN:3086","DOID:8252","SCTID:86094006","UMLS:C0008711"],"synonyms":[{"name":"rhinitis - chronic","type":"exact"},{"name":"rhinitis, chronic","type":"exact"}],"termid":"MONDO:0004514","xrefs":{"Monarch":{"xref_id":"0004514"}}}


id: PBO:0086105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of respiratory complex III; mitochondrial inner membrane protein; required for an early step in assembly of respiratory complex III (cytochrome bc1 complex); mRNA is targeted to mitochondria","termid":"PBO:0086105"}


id: PBO:0049967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 13","termid":"PBO:0049967"}


id: PBO:0039066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase","termid":"PBO:0039066"}


id: PBO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1979","termid":"PBO:0054577"}


id: GO:1900711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"negatively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tensidol B biosynthetic process","synonyms":[{"name":"down regulation of tensidol B anabolism","type":"exact"},{"name":"down regulation of tensidol B biosynthesis","type":"exact"},{"name":"down regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down regulation of tensidol B formation","type":"exact"},{"name":"down regulation of tensidol B synthesis","type":"exact"},{"name":"down-regulation of tensidol B anabolism","type":"exact"},{"name":"down-regulation of tensidol B biosynthesis","type":"exact"},{"name":"down-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol B formation","type":"exact"},{"name":"down-regulation of tensidol B synthesis","type":"exact"},{"name":"downregulation of tensidol B anabolism","type":"exact"},{"name":"downregulation of tensidol B biosynthesis","type":"exact"},{"name":"downregulation of tensidol B biosynthetic process","type":"exact"},{"name":"downregulation of tensidol B formation","type":"exact"},{"name":"downregulation of tensidol B synthesis","type":"exact"},{"name":"inhibition of tensidol B anabolism","type":"exact"},{"name":"inhibition of tensidol B biosynthesis","type":"exact"},{"name":"inhibition of tensidol B biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol B formation","type":"exact"},{"name":"inhibition of tensidol B synthesis","type":"exact"},{"name":"negative regulation of tensidol B anabolism","type":"exact"},{"name":"negative regulation of tensidol B biosynthesis","type":"exact"},{"name":"negative regulation of tensidol B formation","type":"exact"},{"name":"negative regulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900711"}


id: GO:1905102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:bc","GOC:BHF","PMID:26265044","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"positively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of apoptosome assembly","synonyms":[{"name":"activation of apoptosome assembly","type":"narrow"},{"name":"activation of apoptosome formation","type":"narrow"},{"name":"positive regulation of apoptosome formation","type":"exact"},{"name":"up regulation of apoptosome assembly","type":"exact"},{"name":"up regulation of apoptosome formation","type":"exact"},{"name":"up-regulation of apoptosome assembly","type":"exact"},{"name":"up-regulation of apoptosome formation","type":"exact"},{"name":"upregulation of apoptosome assembly","type":"exact"},{"name":"upregulation of apoptosome formation","type":"exact"}],"termid":"GO:1905102"}


