# terms

id: PBO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 163","termid":"PBO:0075114"}


id: MONDO:0000569
data:
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id: MONDO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent episodes of serious assaultive acts or destruction of property due to a failure to resist aggressive impulses; the degree of aggression during these episodes is grossly out of proportion to any psychosocial provocation. The aggressive episodes are not etiologically linked to another mental disorder, a general medical condition, or substance use.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent explosive disorder","secondary_identifiers":["UMLS:C0021776","NCIT:C94332","ICD9:312.34","DOID:12401","ICD10CM:F63.81","icd11.foundation:295017661","ICD9:301.3","MEDGEN:7116","SCTID:231527003"],"synonyms":[{"name":"explosive personality disorder","type":"exact"}],"termid":"MONDO:0001521","xrefs":{"Monarch":{"xref_id":"0001521"}}}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PBO:0082007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 3","termid":"PBO:0082007"}


id: PBO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Alp3 (predicted)","termid":"PBO:0003623"}


id: GO:0006458
data:
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id: GO:0140516
data:
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id: PBO:0053785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1036","termid":"PBO:0053785"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: CHEBI:43040
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id: GO:0016053
data:
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id: GO:0070311
data:
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id: PBO:0045835
data:
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id: PBO:0059004
data:
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id: MONDO:0000747
data:
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id: GO:0051204
data:
  {"annotated_genes":["SJAG_03633","SJAG_05302","SJAG_01917","SJAG_05300","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80387,80326,58530,76242,80068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein localization to mitochondrion","termid":"GO:0070585"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"protein insertion into mitochondrial membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"integral mitochondrial membrane protein localization","type":"exact"},{"name":"integral mitochondrial membrane protein positioning","type":"exact"},{"name":"localization of protein in mitochondrial membrane","type":"exact"},{"name":"positioning of protein in mitochondrial membrane","type":"exact"},{"name":"protein insertion into mitochondrion membrane","type":"exact"},{"name":"protein-mitochondrial membrane insertion","type":"exact"},{"name":"protein-mitochondrion membrane insertion","type":"exact"}],"termid":"GO:0051204","terms_by_termid":{"GO:0032979":null}}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:1900137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of cytokine activity","termid":"GO:0060302"},{"relation_name":"is_a","term_name":"regulation of chemokine activity","termid":"GO:1900136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of chemokine activity","synonyms":[{"name":"down regulation of chemokine activity","type":"exact"},{"name":"down-regulation of chemokine activity","type":"exact"},{"name":"downregulation of chemokine activity","type":"exact"},{"name":"inhibition of chemokine activity","type":"narrow"}],"termid":"GO:1900137"}


id: GO:0061599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction adenylyl-molybdopterin + molybdate = molybdenum cofactor + AMP.","definition_xrefs":["GOC:dph","EC:2.10.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"molybdopterin molybdotransferase activity","secondary_identifiers":["RHEA:35047","Reactome:R-HSA-947531"],"termid":"GO:0061599"}


id: MONDO:0700105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105","xrefs":{"Monarch":{"xref_id":"0700105"}}}


id: MONDO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndesmodysplasic dwarfism","secondary_identifiers":["MESH:C537869","Orphanet:2654","UMLS:C2931647","MEDGEN:419461","OMIM:272450"],"synonyms":[{"name":"syndesmodysplasic dwarfism","type":"exact"}],"termid":"MONDO:0010093","xrefs":{"Monarch":{"xref_id":"0010093"}}}


id: MONDO:0019367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Regional odontodysplasia (ROD) is a localized developmental anomaly of the dental tissues.","definition_xrefs":["Orphanet:83450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontal disorder","termid":"MONDO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional odontodysplasia","secondary_identifiers":["GARD:19036","MESH:D018126","SCTID:66063001","icd11.foundation:1516505714","MEDGEN:104891","UMLS:C0206554"],"synonyms":[{"name":"ghost teeth","type":"exact"}],"termid":"MONDO:0019367","xrefs":{"Monarch":{"xref_id":"0019367"}}}


id: PBO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_organization","termid":"PBO:0031040"}


id: PBO:0065565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 5","termid":"PBO:0065565"}


id: PBO:0024796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-part_of_structure_that_is_capable_of","termid":"PBO:0024796"}


id: MONDO:0005316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection caused by bacterial overgrowth in the vagina. Most affected women are asymptomatic. When symptoms occur, they include foul-smelling vaginal discharge, vaginal itching, and burning. Risk factors include sexual activity with multiple partners and the use of vaginal douches and intrauterine devices. Up to a third of cases resolve without treatment. Antibiotic treatment is recommended when symptoms are present and for women that are pregnant at the time of infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bifidobacteriales infectious disease","termid":"MONDO:0006706"},{"relation_name":"is_a","term_name":"infective vaginitis","termid":"MONDO:0023557"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial vaginosis","secondary_identifiers":["EFO:0003932","icd11.foundation:63323819","SCTID:419760006","DOID:3385","NCIT:C116973","UMLS:C0085166","MESH:D016585","MEDGEN:43118"],"synonyms":[{"name":"BV","type":"broad"}],"termid":"MONDO:0005316","xrefs":{"Monarch":{"xref_id":"0005316"}}}


id: PBO:0057037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130a","termid":"PBO:0057037"}


id: _global:instance_of
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"instance_of","termid":"_global:instance_of"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: GO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial rRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial rRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of rRNA stability","termid":"GO:0044357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial rRNA stability","termid":"GO:0044529"}


id: PBO:0086427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexose transporter that is nearly identical to Hxt11p; has similarity to major facilitator superfamily (MFS) transporters, expression of HXT9 is regulated by transcription factors Pdr1p and Pdr3p","termid":"PBO:0086427"}


id: PR:Q9Y7T1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tap42 gene.","definition_xrefs":["UniProtKB:Q9Y7T1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C63.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.05","synonyms":[{"name":"Spom972h-tap42","type":"exact"}],"termid":"PR:Q9Y7T1"}


id: GO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a cytochrome molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.4.2.-"],"termid":"GO:0016640"}


id: PBO:0089665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Sbp1","termid":"PBO:0089665"}


id: GO:0019547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine catabolic process to ornithine (obsolete GO:0019547)","synonyms":[{"name":"arginine breakdown to ornithine","type":"exact"},{"name":"arginine degradation to ornithine","type":"exact"}],"termid":"GO:0019547"}


id: FYPO:0005726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint does not occur. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah","PMID:21664573","PomBase:vw","PMID:19592249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"abolished deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"abolished mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"abolished mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"deactivation of mitotic spindle assembly checkpoint abolished","type":"exact"}],"termid":"FYPO:0005726"}


id: PBO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035979"}


id: PBO:0073556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 1","termid":"PBO:0073556"}


id: PR:O13679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC737.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C737.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.05","synonyms":[{"name":"Spom972h-SPCC737.05","type":"exact"}],"termid":"PR:O13679"}


id: FYPO:0000550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal pseudohyphal growth","secondary_identifiers":["FYPO:0000435"],"synonyms":[{"name":"abnormal filamentous growth","type":"broad"},{"name":"filamentous growth: abnormal","type":"broad"},{"name":"pseudohyphal growth: abnormal","type":"related"}],"termid":"FYPO:0000550"}


id: PBO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA level","termid":"PBO:0006227"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: GO:0015391
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleobase(out) + cation(out) = nucleobase(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nucleobase:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase:cation symporter activity","type":"broad"}],"termid":"GO:0015391","terms_by_termid":{"GO:0015505":null}}


id: GO:0021902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain.","definition_xrefs":["GOC:dph","GOC:jid","PMID:16226447","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of neuronal cell to specific neuron type in forebrain","termid":"GO:0021902"}


id: PBO:0078881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 4","termid":"PBO:0078881"}


id: PBO:0078719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 4-1","termid":"PBO:0078719"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: MOD:01050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridyl alanyl","termid":"MOD:01050"}


id: PBO:0030419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasm","termid":"PBO:0030419"}


id: PR:O13602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.04c","synonyms":[{"name":"Spom972h-mrps28","type":"exact"}],"termid":"PR:O13602"}


id: PBO:0055835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 5","termid":"PBO:0055835"}


id: MONDO:0007605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinolytic defect","secondary_identifiers":["OMIM:134900","UMLS:C1851184","MEDGEN:338221","MESH:C565017"],"synonyms":[{"name":"fibrinolytic defect","type":"exact"}],"termid":"MONDO:0007605","xrefs":{"Monarch":{"xref_id":"0007605"}}}


id: FYPO:0002706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cordycepin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to cordycepin","synonyms":[{"name":"resistance to cordycepin during mitotic cell cycle","type":"related"},{"name":"resistance to cordycepin during vegetative growth","type":"exact"},{"name":"resistant to cordycepin","type":"exact"}],"termid":"FYPO:0002706"}


id: GO:0035347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of hypoxanthine transport","termid":"GO:0035345"},{"relation_name":"negatively_regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of hypoxanthine transport","synonyms":[{"name":"negative regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035347"}


id: PBO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 1","termid":"PBO:0071947"}


id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: MONDO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triphalangeal thumbs-brachyectrodactyly syndrome is characterized by triphalangeal thumbs and brachydactyly of the hands. It has been described in four families and in one isolated case. Ectrodactyly of the feet and, more rarely, ectrodactyly of the hands were also reported in some family members. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:2947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumbs-brachyectrodactyly syndrome","secondary_identifiers":["MESH:C536564","UMLS:C1860804","OMIM:190680","MEDGEN:348710","GARD:5290"],"synonyms":[{"name":"Carnevale-Hernández-del Castillo syndrome","type":"exact"},{"name":"triphalangeal thumb and brachy-ectrodactyly syndrome","type":"related"},{"name":"triphalangeal thumb and brachyectrodactyly syndrome","type":"related"},{"name":"triphalangeal thumbs brachyectrodactyly","type":"related"},{"name":"triphalangeal thumbs with brachyectrodactyly","type":"related"}],"termid":"MONDO:0008607","xrefs":{"Monarch":{"xref_id":"0008607"}}}


id: PBO:0076413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 7","termid":"PBO:0076413"}


id: PR:O94585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C1442.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.13c","synonyms":[{"name":"Spom972h-SPCC1442.13c","type":"exact"},{"name":"meiotic chromosome segregation protein C1442.13c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94585"}


id: MONDO:0014641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyotrophic lateral sclerosis that has material basis in mutation in the TBK1 gene on chromosome 12q14.","definition_xrefs":["DOID:0110069","PMID:25700176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 4","secondary_identifiers":["OMIM:616439","GARD:18398","MEDGEN:902979","UMLS:C4225325"],"synonyms":[{"name":"FTDALS4","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 4","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis type 4","type":"exact"}],"termid":"MONDO:0014641","xrefs":{"Monarch":{"xref_id":"0014641"}}}


id: GO:1990556
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87867],"is_not":false,"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-isopropylmalate(2-) transmembrane transport","termid":"GO:1902357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial isopropylmalate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990556","terms_by_termid":{"GO:1990556":null}}


id: PBO:0062992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 1","termid":"PBO:0062992"}


id: GO:0018324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfenic acid, found in the active site of NADH peroxidase, nitrile hydratase, and peptide methionine sulfoxide reductase.","definition_xrefs":["PMID:2501303","RESID:AA0205"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfenic acid (obsolete GO:0018324)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphenic acid","type":"exact"}],"termid":"GO:0018324"}


id: GO:0042861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of achromobactin, a citrate siderophore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"achromobactin metabolic process","termid":"GO:0042860"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"achromobactin biosynthetic process","secondary_identifiers":["GO:0031182","GO:0031181"],"synonyms":[{"name":"achromobactin anabolism","type":"exact"},{"name":"achromobactin biosynthesis","type":"exact"},{"name":"achromobactin formation","type":"exact"},{"name":"achromobactin synthesis","type":"exact"}],"termid":"GO:0042861"}


id: PBO:0026688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_carboxypeptidase_activity","termid":"PBO:0026688"}


id: PBO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase (predicted)","termid":"PBO:0002523"}


id: PBO:0056793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 2","termid":"PBO:0056793"}


id: PBO:0038902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRB3 divergent transcript","termid":"PBO:0038902"}


id: GO:0048829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root cap over time, from its formation to the mature structure. The root cap protects the root meristem from friction as the root grows through the soil. The cap is made up of a group of parenchyma cells which secrete a glycoprotein mucilage as a lubricant.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap development","termid":"GO:0048829"}


id: GO:0005672
data:
  {"annotated_genes":["SJAG_01710","SJAG_02174"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73804,80433],"is_not":false,"summary":null,"term":"GO:0005672"}]},"cv_name":"cellular_component","definition":"A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12).","definition_xrefs":["PMID:17560669","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01710":null,"SJAG_02174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIIA complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005672","terms_by_termid":{"GO:0005672":null}}


id: GO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in host (obsolete GO:0044000)","synonyms":[{"name":"movement in host environment","type":"related"},{"name":"movement of symbiont in host","type":"exact"},{"name":"movement of symbiont within host","type":"exact"},{"name":"movement within host","type":"exact"},{"name":"symbiont movement in host","type":"exact"},{"name":"symbiont movement within host","type":"related"}],"termid":"GO:0044000"}


id: MONDO:0021097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises anywhere in the ductal system of the breast. It is characterized by fibrovascular structures lined by benign epithelial and myoepithelial proliferations. Intraductal breast papillomas are classified as central, when they arise in large ducts, or peripheral, when they arise in the terminal ductal lobular units.","definition_xrefs":["NCIT:C3863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"intraductal papillary breast neoplasm","termid":"MONDO:0002061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papilloma","secondary_identifiers":["DOID:1626","MEDGEN:65944","SCTID:99571000119102","SCTID:254848002","UMLS:C0238034"],"synonyms":[{"name":"breast duct papilloma","type":"related"},{"name":"breast papilloma","type":"exact"},{"name":"duct papilloma of breast","type":"exact"},{"name":"duct papilloma of the breast","type":"exact"},{"name":"ductal breast papilloma","type":"exact"},{"name":"intraductal breast papilloma","type":"exact"},{"name":"intraductal papilloma of breast","type":"exact"},{"name":"intraductal papilloma of the breast","type":"exact"},{"name":"mammary duct papilloma","type":"exact"},{"name":"papilloma of breast","type":"exact"},{"name":"papilloma of the breast","type":"exact"}],"termid":"MONDO:0021097","xrefs":{"Monarch":{"xref_id":"0021097"}}}


id: GO:1901625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ergosterol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ergosterol","termid":"GO:1901625"}


id: MOD:00637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-arginine residue with a (13)C,3x(2)H labeled methyl group to form a 1x(13)C,3x(2)H labeled monomethylated L-arginine.","definition_xrefs":["Unimod:329"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H labeled monomethylated L-arginine","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"},{"name":"monomethylated arginine","type":"related"}],"termid":"MOD:00637"}


id: GO:0033852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3,5,3'-triiodo-L-thyronine = 3,5,3'-triiodothyropyruvate + L-glutamate.","definition_xrefs":["RHEA:19133","EC:2.6.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"thyroid-hormone transaminase activity","secondary_identifiers":["MetaCyc:THYROID-HORMONE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R03952"],"synonyms":[{"name":"3,5-dinitrotyrosine aminotransferase activity","type":"related"},{"name":"3,5-dinitrotyrosine transaminase activity","type":"related"},{"name":"L-3,5,3'-triiodothyronine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thyroid hormone aminotransferase activity","type":"related"},{"name":"thyroid-hormone aminotransferase activity","type":"related"}],"termid":"GO:0033852"}


id: PBO:0026930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_composition","termid":"PBO:0026930"}


id: GO:1901355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rapamycin","termid":"GO:1901355"}


id: GO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:jh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"negatively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glycerol transport","termid":"GO:0090373"}


id: GO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which dendrites recognize and avoid contact with sister dendrites from the same cell.","definition_xrefs":["GOC:sart","PMID:17482551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite self-avoidance","synonyms":[{"name":"dendrite repulsion","type":"exact"}],"termid":"GO:0070593"}


id: GO:0160201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in a microsporidian spore,  that swells with water, and exerts pressure to rupture the polar cap and evert the polar tube through which the sporoplasm escapes to infect the host.","definition_xrefs":["PMID:19673893","Wikipedia:polaroplast","PMID:16005007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polaroplast","termid":"GO:0160201"}


id: FYPO:0001539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular magnesium level","synonyms":[{"name":"normal cellular magnesium accumulation","type":"related"},{"name":"normal cellular magnesium ion level","type":"exact"},{"name":"normal cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"normal cellular magnesium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001539"}


id: PR:O59768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcium/proton antiporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar calcium ion transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.02c","secondary_identifiers":["UniProtKB:O59768"],"synonyms":[{"name":"Spom972h-chaA","type":"exact"},{"name":"vacuolar Ca(2+)/H(+) exchanger (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59768"}


id: GO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the prospective N-terminal cysteine residue in an unmodified prolipoprotein.","definition_xrefs":["RHEA:56712","PMID:8051048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity","secondary_identifiers":["EC:2.5.1.145"],"termid":"GO:0008961"}


id: GO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:ai","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endopeptidase activity","synonyms":[{"name":"protease regulator activity","type":"narrow"}],"termid":"GO:0052548"}


id: GO:0140051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:21778427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"}


id: MONDO:0014510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhizomelic chondrodysplasia punctate that has material basis in homozygous or compound heterozygous mutation in the FAR1 gene on chromosome 11p15, which is required for the conversion of fatty acyl-CoAs to fatty alcohols, causing reduction or complete loss of FAR1 activity result in peroxisomal FAR1 deficiency.","definition_xrefs":["DOID:0081243"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"chondrodysplasia punctata","termid":"MONDO:0019701"},{"relation_name":"is_a","term_name":"fatty acyl-CoA reductase defects","termid":"MONDO:0100275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0019053","MONDO:0002525"],"is_obsolete":false,"name":"fatty acyl-CoA reductase 1 deficiency","secondary_identifiers":["Orphanet:438178","GARD:13319","OMIM:616154","UMLS:C4015344","MEDGEN:863781"],"synonyms":[{"name":"FAR1 deficiency","type":"exact"},{"name":"PFCRD","type":"related"},{"name":"fatty acyl-CoA reductase 1 deficiency","type":"exact"},{"name":"fatty acyl-CoA reductase 1 disorder","type":"exact"},{"name":"fatty acyl-CoA reductase 1 disorder or fatty acyl-CoA reductase 1 deficiency","type":"exact"},{"name":"peroxisomal fatty acyl-CoA reductase 1 disorder","type":"related"},{"name":"rhizomelic chondrodysplasia punctata type 4","type":"exact"},{"name":"severe intellectual disability-epilepsy-cataract syndrome due to FAR1 deficiency","type":"exact"},{"name":"severe intellectual disability-epilepsy-cataract syndrome due to fatty acyl-CoA reductase 1 deficiency","type":"exact"},{"name":"severe intellectual disability-epilepsy-cataract syndrome due to peroxisomal disorder","type":"exact"}],"termid":"MONDO:0014510","xrefs":{"Monarch":{"xref_id":"0014510"}}}


id: MONDO:0019932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated partial vaginal agenesis is a rare, non-syndromic urogenital tract malformation characterized by the absence of a vagina or the presence of a vaginal dimple shorter than 5 cm. It is often associated with uterine agenesis, hematocolpos or primary amenorrhea and dyspareunia. Ovaries and fallopian tubes are normal.","definition_xrefs":["Orphanet:96269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated partial vaginal agenesis","secondary_identifiers":["MEDGEN:687783","SCTID:87380008","UMLS:C1261251","GARD:19347","icd11.foundation:15782"],"synonyms":[{"name":"congenital absence of vagina","type":"exact"}],"termid":"MONDO:0019932","xrefs":{"Monarch":{"xref_id":"0019932"}}}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: PBO:0091048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2","termid":"PBO:0091048"}


id: PBO:0077795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin 1A interacting protein 1","termid":"PBO:0077795"}


id: MONDO:0859690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant adenoma","termid":"MONDO:0850125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant cystadenoma","secondary_identifiers":["DOID:60004"],"termid":"MONDO:0859690","xrefs":{"Monarch":{"xref_id":"0859690"}}}


id: GO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells.","definition_xrefs":["PMID:17666529","CL:1000428","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal stem cell homeostasis","termid":"GO:0036334"}


id: PBO:0069286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 542, pseudogene","termid":"PBO:0069286"}


id: PR:O94353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apq12 gene.","definition_xrefs":["UniProtKB:O94353","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein apq12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.04","synonyms":[{"name":"Spom972h-apq12","type":"exact"}],"termid":"PR:O94353"}


id: GO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside biosynthetic process","synonyms":[{"name":"deoxyribonucleoside anabolism","type":"exact"},{"name":"deoxyribonucleoside biosynthesis","type":"exact"},{"name":"deoxyribonucleoside formation","type":"exact"},{"name":"deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046120"}


id: GO:1900374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:go_curators","GOC:TermGenie","PMID:8804308"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900374)","synonyms":[{"name":"activation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900374"}


id: GO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adult salivary gland are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland morphogenesis","termid":"GO:0007437"}


id: PBO:0090458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor small subunit, U2AF-59","termid":"PBO:0090458"}


id: GO:0140084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of haploid amoebae cells with matching mating types to form a larger cell, which ingests additional amoebae and forms a cellulose wall. The resulting macrocyst undergoes recombination and meiosis followed by release of haploid amoebae. An example of this process can be found in Dictyostelium discoideum.","definition_xrefs":["PMID:16592095","PMID:20089169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sexual macrocyst formation","synonyms":[{"name":"macrocyst formation","type":"related"},{"name":"sexual fusion","type":"related"}],"termid":"GO:0140084"}


id: PBO:0080920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 9","termid":"PBO:0080920"}


id: PBO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 12","termid":"PBO:0071335"}


id: GO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0034414)","synonyms":[{"name":"endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0034414"}


id: PBO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAT1","termid":"PBO:0016059"}


id: PBO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses frp1","termid":"PBO:0000367"}


id: FYPO:0004025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of the tubulin poison carbendazim (mecarzole; MBC) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to carbendazim","synonyms":[{"name":"resistance to MBC","type":"exact"},{"name":"resistance to carbendazim during mitotic cell cycle","type":"related"},{"name":"resistance to carbendazim during vegetative growth","type":"exact"},{"name":"resistance to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"resistance to methylbenzylcarbamylate","type":"exact"},{"name":"resistant to carbendazim","type":"exact"}],"termid":"FYPO:0004025"}


id: PBO:0029283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029283"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: MONDO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular defect, developmental","secondary_identifiers":["MESH:C565882","DOID:0080633","MEDGEN:1823949","UMLS:C5774175","OMIM:212093"],"synonyms":[{"name":"CARDIAC valvular defect, developmental","type":"related"},{"name":"CVDD","type":"related"},{"name":"cardiac valvular defect, developmental","type":"exact"}],"termid":"MONDO:0008913","xrefs":{"Monarch":{"xref_id":"0008913"}}}


id: PBO:0079813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like with PHD and ring finger domains 1","termid":"PBO:0079813"}


id: GO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","PMID:18406478","PMID:15953025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into host","termid":"GO:0044417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into host","secondary_identifiers":["GO:0051808"],"synonyms":[{"name":"translocation of peptides or proteins into other organism during symbiotic interaction","type":"broad"},{"name":"translocation of peptides or proteins into other organism involved in symbiotic interaction","type":"broad"},{"name":"transport of peptides or proteins into host","type":"exact"},{"name":"transport of peptides or proteins into other organism during symbiotic interaction","type":"broad"}],"termid":"GO:0042000"}


id: PBO:0059209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 1","termid":"PBO:0059209"}


id: GO:2000094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"},{"relation_name":"is_a","term_name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"},{"relation_name":"negatively_regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000094"}


id: PBO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_spindle_pole_body_separation","termid":"PBO:0030471"}


id: GO:0006637
data:
  {"annotated_genes":["SJAG_03349","SJAG_00947","SJAG_04895","SJAG_00866","SJAG_02769","SJAG_04499","SJAG_04865","SJAG_03715","SJAG_03471","SJAG_03290","SJAG_02380","SJAG_00902","SJAG_01187","SJAG_04007","SJAG_03064","SJAG_01139","SJAG_02158","SJAG_01402","SJAG_03813","SJAG_03313","SJAG_02006","SJAG_03310","SJAG_02741","SJAG_01524","SJAG_03909","SJAG_01989","SJAG_01474","SJAG_03731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96321,108278],"is_not":false,"summary":null,"term":"GO:0006637"},{"annotations":[97879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[70355,90911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[81905,113946,115364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[81956,78938,76068,114506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[107030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[79050,80655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[67271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[115083,110954],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[86870,80887,87306,74471,76370,75106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[76921],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[89378,73518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"thioester metabolic process","termid":"GO:0035383"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"acyl-CoA metabolism","type":"exact"}],"termid":"GO:0006637","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0010510":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty aldehyde + H2O + NAD+ = a long-chain fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:10652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0102673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN","UM-BBD_reactionID:r1404","EC:1.2.1.48"],"synonyms":[{"name":"fatty aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"long-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain-aldehyde dehydrogenase activity","type":"exact"},{"name":"long-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050061"}


id: PBO:0041880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 2","termid":"PBO:0041880"}


id: GO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of norepinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003118"}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: PBO:0086696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localized to the membranes; gene expression regulated by copper levels","termid":"PBO:0086696"}


id: MONDO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare parkinsonian syndrome due to intoxication (obsolete MONDO:0017637)","secondary_identifiers":["Orphanet:306679"],"termid":"MONDO:0017637","xrefs":{"Monarch":{"xref_id":"0017637"}}}


id: MONDO:0003210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the intrahepatic bile duct epithelium in any site of the intrahepatic biliary tree. Grossly, the malignant lesions are solid, nodular, and grayish. Morphologically, the vast majority of cases are adenocarcinomas. Signs and symptoms include malaise, weight loss, right upper quadrant abdominal pain, and night sweats. Early detection is difficult and the prognosis is generally poor.","definition_xrefs":["NCIT:C35417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic bile duct cancer","termid":"MONDO:0001487"},{"relation_name":"is_a","term_name":"cholangiocarcinoma","termid":"MONDO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic cholangiocarcinoma","secondary_identifiers":["GARD:6042","MEDGEN:87521","UMLS:C0345905","DOID:4928","EFO:1001961","icd11.foundation:1253728223","SCTID:109842005","ONCOTREE:IHCH"],"synonyms":[{"name":"ICC","type":"exact"},{"name":"IHCH","type":"related"},{"name":"cholangiocarcinoma, intrahepatic, malignant","type":"exact"},{"name":"intrahepatic Cholangiocellular carcinoma","type":"exact"},{"name":"intrahepatic bile duct cancer (cholangiocarcinoma)","type":"exact"},{"name":"intrahepatic bile duct carcinoma","type":"exact"},{"name":"intrahepatic carcinoma of bile duct","type":"exact"},{"name":"intrahepatic carcinoma of the bile duct","type":"exact"},{"name":"intrahepatic cholangiocarcinoma","type":"exact"},{"name":"intrahepatic cholangiocarcinoma (bile duct cancer)","type":"exact"},{"name":"peripheral cholangiocarcinoma","type":"exact"}],"termid":"MONDO:0003210","xrefs":{"Monarch":{"xref_id":"0003210"}}}


id: SO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/Mature_transcript"],"synonyms":[{"name":"mature transcript","type":"exact"}],"termid":"SO:0000233"}


id: PBO:0029112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_process","termid":"PBO:0029112"}


id: MONDO:0003700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the brachial nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve plexus neoplasm","termid":"MONDO:0003100"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neoplasm","secondary_identifiers":["DOID:5913","MEDGEN:272380","UMLS:C1332602","NCIT:C5823"],"synonyms":[{"name":"brachial nerve plexus neoplasm","type":"exact"},{"name":"brachial nerve plexus neoplasm (disease)","type":"exact"},{"name":"brachial nerve plexus tumor","type":"exact"},{"name":"brachial nerve plexus tumour","type":"exact"},{"name":"brachial plexus neoplasm","type":"exact"},{"name":"brachial plexus neoplasms","type":"exact"},{"name":"brachial plexus tumor","type":"exact"},{"name":"brachial plexus tumour","type":"exact"},{"name":"neoplasm of brachial nerve plexus","type":"exact"},{"name":"neoplasm of brachial plexus","type":"exact"},{"name":"neoplasm of the brachial plexus","type":"exact"},{"name":"tumor of brachial nerve plexus","type":"exact"},{"name":"tumor of brachial plexus","type":"exact"},{"name":"tumor of the brachial plexus","type":"exact"},{"name":"tumour of brachial nerve plexus","type":"exact"},{"name":"tumour of brachial plexus","type":"exact"},{"name":"tumour of the brachial plexus","type":"exact"}],"termid":"MONDO:0003700","xrefs":{"Monarch":{"xref_id":"0003700"}}}


id: PBO:0085800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains sequence that closely resembles a J domain (typified by the E. coli DnaJ protein)","termid":"PBO:0085800"}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: GO:0042284
data:
  {"annotated_genes":["SJAG_01057","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74275,75921],"is_not":false,"summary":null,"term":"GO:0042284"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 ferrocytochrome b5 + O2 + 2 H+ -> a sphingosine ceramide (aka (4E)-sphing-4-enine ceramide) + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["PMID:12417141","RHEA:46544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sphingolipid delta-4 desaturase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.14.19.17","Reactome:R-HSA-428259"],"synonyms":[{"name":"delta-4 sphingolipid desaturase activity","type":"exact"}],"termid":"GO:0042284","terms_by_termid":{"GO:0042284":null}}


id: PBO:0030549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_asparagine_import","termid":"PBO:0030549"}


id: PR:Q9UT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC513.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C513.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.07","synonyms":[{"name":"Spom972h-SPAC513.07","type":"exact"}],"termid":"PR:Q9UT59"}


id: GO:0072324
data:
  {"annotated_genes":["SJAG_00146","SJAG_01855","SJAG_01017","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93029,93490,94660,110893],"is_not":false,"summary":null,"term":"GO:0072324"}]},"cv_name":"cellular_component","definition":"Ascus cytoplasm that is not packaged into ascospores.","definition_xrefs":["DOI:10.1016/S0953-7562(96)80057-8","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_01017":null,"SJAG_01855":null,"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus epiplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072324","terms_by_termid":{"GO:0072324":null}}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: PBO:0047250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 239 member A","termid":"PBO:0047250"}


id: GO:0140022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A giant secretory organelle that comprises a bulb-shape capsule containing a coiled hollow tubule structure attached to it. A cnida defines the phylum Cnidaria.","definition_xrefs":["Wikipedia:Cnida#Structure_and_function"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cnida","synonyms":[{"name":"cnidae (plural)","type":"exact"}],"termid":"GO:0140022"}


id: PBO:0052427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT proto-oncogene, receptor tyrosine kinase","termid":"PBO:0052427"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: PBO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MARK4","termid":"PBO:0017030"}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: GO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"alpha-beta intraepithelial T cell development","type":"related"},{"name":"alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002299"}


id: PBO:0062048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 35","termid":"PBO:0062048"}


id: MONDO:0011540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 14 (SCA14) is a rare mild subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by slowly progressive ataxia, dysarthria and nystagmus.","definition_xrefs":["Orphanet:98763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 14","secondary_identifiers":["GARD:9867","DOID:0050964","icd11.foundation:736357100","OMIM:605361","UMLS:C1854369","MEDGEN:343106","SCTID:719210007","MESH:C537196"],"synonyms":[{"name":"SCA14","type":"exact"},{"name":"spinocerebellar ataxia 14","type":"related"},{"name":"spinocerebellar ataxia type 14","type":"exact"}],"termid":"MONDO:0011540","xrefs":{"Monarch":{"xref_id":"0011540"}}}


id: PBO:0069039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 284, pseudogene","termid":"PBO:0069039"}


id: PR:Q9UUL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad57 gene.","definition_xrefs":["UniProtKB:Q9UUL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.07","synonyms":[{"name":"RAD57 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad57","type":"exact"}],"termid":"PR:Q9UUL2"}


id: FYPO:0006265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal after a cell has been subjected to hypotonic osmotic stress. Normally, vacuoles enlarge during hypotonic stress, and return to the original smaller size when the stress is relieved, either due to shrinking or fission.","definition_xrefs":["PMID:28944093","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"large vacuoles present following cellular hypotonic response","synonyms":[{"name":"enlarged vacuoles present following cellular hypotonic response","type":"exact"},{"name":"large vacuoles large vacuoles present following cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"large vacuoles present during recovery from cellular hypotonic response","type":"exact"},{"name":"large vacuoles present following cellular hypotonic response during vegetative growth","type":"exact"},{"name":"large vacuoles present following hypotonic stress","type":"exact"}],"termid":"FYPO:0006265"}


id: PBO:0036397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex zinc knuckle subunit Air1","termid":"PBO:0036397"}


id: PBO:0078715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAG) 3-1","termid":"PBO:0078715"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: PBO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12 small nucleolar RNA/small nucleolar RNA snR99","termid":"PBO:0005200"}


id: GO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.","definition_xrefs":["GOC:mah","PMID:17979511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"epoxygenase P450 pathway","secondary_identifiers":["Reactome:R-HSA-2142670"],"termid":"GO:0019373"}


id: MONDO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving observing an unsuspecting person who is naked, disrobing, or engaging in sexual activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voyeurism","secondary_identifiers":["ICD10CM:F65.3","ICD9:302.82","MEDGEN:12126","MESH:D014843","DOID:10834","SCTID:63835008","NCIT:C94360","UMLS:C0042979"],"termid":"MONDO:0001135","xrefs":{"Monarch":{"xref_id":"0001135"}}}


id: GO:0005669
data:
  {"annotated_genes":["SJAG_03900","SJAG_01475","SJAG_04977","SJAG_00872","SJAG_00584","SJAG_02458","SJAG_04654","SJAG_04274","SJAG_01808","SJAG_00421","SJAG_02541","SJAG_03285","SJAG_04917","SJAG_00741","SJAG_00735","SJAG_03107"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58090,59940,69630,71651,72395,73125,75409,76205,76723,77343,78485,78614,82123,95070,103143,117173],"is_not":false,"summary":null,"term":"GO:0005669"}]},"cv_name":"cellular_component","definition":"A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0471953393","ISBN:0879695501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00584":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00872":null,"SJAG_01475":null,"SJAG_01808":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_03107":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04654":null,"SJAG_04917":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIID complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005669","terms_by_termid":{"GO:0005669":null}}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: PBO:0041550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 63","termid":"PBO:0041550"}


id: GO:0015208
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112137],"is_not":false,"summary":null,"term":"GO:0015208"}]},"cv_name":"molecular_function","definition":"Enables the transfer of guanine, 2-amino-6-hydroxypurine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"guanine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015208","terms_by_termid":{"GO:0015208":null}}


id: PBO:0042419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 3","termid":"PBO:0042419"}


id: PBO:0057732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1307","termid":"PBO:0057732"}


id: PBO:0058087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4304","termid":"PBO:0058087"}


id: PBO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR3","termid":"PBO:0016994"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: PATO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group.","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephosphorylated","termid":"PATO:0002263"}


id: GO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of BMP signaling pathway","secondary_identifiers":["GO:0090099"],"synonyms":[{"name":"down regulation of BMP signaling pathway","type":"exact"},{"name":"down-regulation of BMP signaling pathway","type":"exact"},{"name":"downregulation of BMP signaling pathway","type":"exact"},{"name":"inhibition of BMP signaling pathway","type":"narrow"},{"name":"negative regulation of BMP receptor signaling pathway","type":"related"},{"name":"negative regulation of BMP signalling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"negative regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030514"}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: GO:0033311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate phytyl diphosphate.","definition_xrefs":["MetaCyc:PWY-5086","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via phytyl diphosphate","synonyms":[{"name":"chlorophyll a anabolism via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthesis via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthetic process via phytyl-PP","type":"exact"},{"name":"chlorophyll a formation via phytyl chlorophyll a formation via phytyl-PP","type":"exact"},{"name":"chlorophyll a synthesis via phytyl diphosphate","type":"exact"}],"termid":"GO:0033311"}


id: MONDO:0006520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder which affects the volar surfaces of fingers. Clinical signs include recurrent, spontaneous or post-traumatic bruising of fingers. The clinical course of the resultant hematoma usually follows a pattern of resolution within days.","definition_xrefs":["NCIT:C35467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Achenbach syndrome","secondary_identifiers":["PMID:22915534","SCTID:238824006","DOID:6687","UMLS:C0473563","EFO:1000661","MEDGEN:99176"],"synonyms":[{"name":"Achenbach syndrome","type":"exact"},{"name":"paroxysmal hematoma of the finger","type":"exact"}],"termid":"MONDO:0006520","xrefs":{"Monarch":{"xref_id":"0006520"}}}


id: MONDO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 14q deletion is a chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material on the long arm (q) of chromosome 14.","definition_xrefs":["GARD:0003722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 14","secondary_identifiers":["GARD:3722","Orphanet:262110","MEDGEN:444119","UMLS:C2931697"],"synonyms":[{"name":"14q deletion","type":"related"},{"name":"14q monosomy","type":"related"},{"name":"chromosome 14q deletion","type":"related"},{"name":"deletion 14q","type":"related"},{"name":"monosomy 14q","type":"related"},{"name":"partial deletion of chromosome 14q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 14","type":"exact"},{"name":"partial monosomy 14q","type":"related"},{"name":"partial monosomy of chromosome 14q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 14","type":"exact"}],"termid":"MONDO:0016912","xrefs":{"Monarch":{"xref_id":"0016912"}}}


id: PBO:0069357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 617, pseudogene","termid":"PBO:0069357"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: MONDO:0015605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 9p is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the short arm of chromosome 9, with a highly variable phenotype typically characterized by intellectual disability, craniofacial dysmorphism (trigonocephaly, upslanting palpebral fissures, hypoplastic supraorbital ridges), abnormal digits (long middle phalanges with short distal phalanges), as well as frequent association with genitourinary abnormalities (cryptorchidism, hypospadias, ambiguous genitalia, 46,XY testicular dysgenesis). Congenital hypothyroidism and cardiovascular defects have been reported in some cases. Patients present an increased risk for gonadoblastoma.","definition_xrefs":["Orphanet:1642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 9p deletion syndrome","termid":"MONDO:0008013"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 9p","secondary_identifiers":["MESH:C538025","SCTID:763530000","UMLS:C0265425","MEDGEN:539240","GARD:18732"],"synonyms":[{"name":"distal deletion 9p","type":"exact"},{"name":"distal monosomy type 9p","type":"exact"},{"name":"monosomy 9pter","type":"exact"},{"name":"telomeric deletion 9p","type":"exact"}],"termid":"MONDO:0015605","xrefs":{"Monarch":{"xref_id":"0015605"}}}


id: GO:0021649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vestibulocochlear nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"vestibulocochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021649"}


id: PBO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome alignment maintaining phosphoprotein 1","termid":"PBO:0042942"}


id: GO:0008721
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80732],"is_not":false,"summary":null,"term":"GO:0008721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-serine ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DSERDEAM-RXN","Reactome:R-HSA-9034539","Reactome:R-HSA-9014741","RHEA:13977"],"synonyms":[{"name":"D-hydroxy amino acid dehydratase activity","type":"broad"},{"name":"D-hydroxyaminoacid dehydratase activity","type":"related"},{"name":"D-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"D-serine deaminase activity","type":"related"},{"name":"D-serine dehydrase activity","type":"related"},{"name":"D-serine dehydratase (deaminating) activity","type":"related"},{"name":"D-serine dehydratase activity","type":"related"},{"name":"D-serine dehydration activity","type":"related"},{"name":"D-serine hydro-lyase (deaminating) activity","type":"related"},{"name":"D-serine hydrolase activity","type":"related"}],"termid":"GO:0008721","terms_by_termid":{"GO:0008721":null}}


id: PBO:0043764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX14","termid":"PBO:0043764"}


id: PBO:0089222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1","termid":"PBO:0089222"}


id: PR:Q10192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.07","secondary_identifiers":["UniProtKB:Q10192"],"synonyms":[{"name":"Spom972h-RPL18","type":"exact"}],"termid":"PR:Q10192"}


id: MONDO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute graft vs. host disease (obsolete MONDO:0005410)","termid":"MONDO:0005410","xrefs":{"Monarch":{"xref_id":"0005410"}}}


id: PBO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 4, pseudogene","termid":"PBO:0044490"}


id: PBO:0053967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1277","termid":"PBO:0053967"}


id: PBO:0064599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F1 divergent transcript","termid":"PBO:0064599"}


id: MOD:00163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylaminogalactosyl)-L-serine.","definition_xrefs":["RESID:AA0154","PubMed:115869","PubMed:3086323","PubMed:16005634","PubMed:8948436","PubMed:9092502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) serine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(N-acetylamino)galactosyl-L-serine","type":"exact"},{"name":"O3-(N-acetylgalactosaminyl)serine","type":"exact"},{"name":"OGalNAcSer","type":"exact"},{"name":"mucin type O-glycosylserine","type":"exact"}],"termid":"MOD:00163"}


id: PBO:0028843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly","termid":"PBO:0028843"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_04954","SJAG_02163","SJAG_00554","SJAG_05219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76199,73820,99524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[64420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[62347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: MONDO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial non-syndromic sensorineural hearing loss","secondary_identifiers":["UMLS:C3151897","DOID:0111751","Orphanet:90641","GARD:16792","MEDGEN:463247","OMIM:500008"],"synonyms":[{"name":"deafness, isolated, due to mitochondrial transmission","type":"narrow"},{"name":"deafness, nonsyndromic sensorineural, mitochondrial","type":"related"},{"name":"isolated mitochondrial neurosensory deafness","type":"narrow"},{"name":"isolated mitochondrial sensorineural deafness","type":"narrow"},{"name":"mitochondrial non-syndromic neurosensory deafness","type":"narrow"},{"name":"mitochondrial non-syndromic sensorineural deafness","type":"narrow"}],"termid":"MONDO:0010779","xrefs":{"Monarch":{"xref_id":"0010779"}}}


id: GO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of snoRNA class molecule (referred to as an sRNA in Archaea). In eukaryotes, this occurs in conjunction with termination of transcription of precursor snoRNA molecules and may occur post-transcriptionally on incorrectly processed molecules targeted for degradation.","definition_xrefs":["PMID:18951092","GOC:krc","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete sno(s)RNA polyadenylation (obsolete GO:0071050)","synonyms":[{"name":"sRNA polyadenylation","type":"narrow"},{"name":"snoRNA polyadenylation","type":"narrow"}],"termid":"GO:0071050"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: PBO:0068258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 5","termid":"PBO:0068258"}


id: PBO:0034772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family scission GTPase Dnm1","termid":"PBO:0034772"}


id: MONDO:1011924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachycephalic airway obstruction syndrome, non-human animal","secondary_identifiers":["OMIA:000145"],"termid":"MONDO:1011924","xrefs":{"Monarch":{"xref_id":"1011924"}}}


id: MONDO:1011925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, non-human animal","secondary_identifiers":["OMIA:000573"],"termid":"MONDO:1011925","xrefs":{"Monarch":{"xref_id":"1011925"}}}


id: PBO:0063977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 11","termid":"PBO:0063977"}


id: PBO:0003473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus2 (predicted)","termid":"PBO:0003473"}


id: PBO:0063034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK1 interacting protein 1","termid":"PBO:0063034"}


id: GO:0032175
data:
  {"annotated_genes":["SJAG_04470","SJAG_00663","SJAG_03688","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93987,99626,105557,115567],"is_not":false,"summary":null,"term":"GO:0032175"}]},"cv_name":"cellular_component","definition":"A septin ring, i.e. a ring-shaped structure composed of septins and septin-associated proteins, located at the neck of a shmoo (mating projection). The septin ring in the neck of a shmoo may act as a barrier to localize mating factors in the shmoo tip.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"mating projection septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032175","terms_by_termid":{"GO:0032175":null}}


id: MOD:00835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-oxoalanine.","definition_xrefs":["DeltaMass:349","PubMed:9276974","RESID:AA0185#SER","PubMed:7628016","PubMed:14563551","PubMed:8681943","PubMed:9478923","Unimod:401#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Ser)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"Didehydro","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Ser)","type":"exact"},{"name":"dehydrogenated serine residue","type":"related"},{"name":"formylglycine","type":"related"},{"name":"formylglycine (from serine)","type":"exact"},{"name":"oxoalanine","type":"related"}],"termid":"MOD:00835"}


id: GO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Advancement of the cleavage furrow from the outside of the cell inward towards the center of the cell. The cleavage furrow acts as a 'purse string' which draws tight to separate daughter cells during cytokinesis and partition the cytoplasm between the two daughter cells. The furrow ingresses until a cytoplasmic bridge is formed.","definition_xrefs":["PMID:20687468","PMID:15811947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"cleavage furrow ingression","synonyms":[{"name":"cleavage furrow contraction","type":"exact"}],"termid":"GO:0036090"}


id: PATO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being turned outward in placement.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"everted","termid":"PATO:0001597"}


id: PBO:0042758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 20","termid":"PBO:0042758"}


id: MONDO:0014175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited condition caused by mutation(s) in the SLC25A4 gene, encoding ADP/ATP translocase 1. It is characterized by hypertrophic cardiomyopathy.","definition_xrefs":["NCIT:C129977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 12B (cardiomyopathic type), autosomal recessive","secondary_identifiers":["MEDGEN:815773","GARD:15961","UMLS:C3809443","DOID:0080335","OMIM:615418"],"synonyms":[{"name":"MTDPS12","type":"related"},{"name":"MTDPS12B","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12 (cardiomyopathic type)","type":"related"},{"name":"mitochondrial DNA depletion syndrome 12B (cardiomyopathic type) AR","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12B (cardiomyopathic type), AR","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 12B (cardiomyopathic type), autosomal recessive","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 12","type":"related"}],"termid":"MONDO:0014175","xrefs":{"Monarch":{"xref_id":"0014175"}}}


id: PATO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's disposition to lack activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioural activity","termid":"PATO:0002265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural inactive","termid":"PATO:0001706"}


id: PBO:0039450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and MYND domain containing 1","termid":"PBO:0039450"}


id: GO:0010979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vitamin D 24-hydroxylase activity (obsolete GO:0010979)","termid":"GO:0010979"}


id: MONDO:0014970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the PLCZ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 17","secondary_identifiers":["OMIM:617214","MEDGEN:934633","UMLS:C4310666","DOID:0070174"],"synonyms":[{"name":"Male infertility due to oocyte Activation failure","type":"related"},{"name":"PLCZ1 azoospermia","type":"exact"},{"name":"SPGF17","type":"exact"},{"name":"azoospermia caused by mutation in PLCZ1","type":"exact"},{"name":"spermatogenic failure 17","type":"exact"},{"name":"spermatogenic failure 17; SPGF17","type":"exact"},{"name":"spermatogenic failure type 17","type":"exact"}],"termid":"MONDO:0014970","xrefs":{"Monarch":{"xref_id":"0014970"}}}


id: MONDO:0008561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumb deformity","secondary_identifiers":["MESH:C536903","OMIM:188100","HP:0001172","UMLS:C0575897","MEDGEN:107901"],"synonyms":[{"name":"thumb absent or hypoplastic","type":"related"},{"name":"thumb deformity","type":"exact"},{"name":"thumb deformity (disease)","type":"exact"},{"name":"thumb hypoplastic","type":"related"}],"termid":"MONDO:0008561","xrefs":{"Monarch":{"xref_id":"0008561"}}}


id: PBO:0074341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","termid":"PBO:0074341"}


id: MONDO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 7, autosomal recessive","secondary_identifiers":["UMLS:C5193025","MEDGEN:1683911","OMIM:618317"],"synonyms":[{"name":"BASAL GANGLIA CALCIFICATION, IDIOPATHIC, 7, AUTOSOMAL RECESSIVE","type":"related"},{"name":"IBGC7","type":"related"}],"termid":"MONDO:0032673","xrefs":{"Monarch":{"xref_id":"0032673"}}}


id: PBO:0077473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 192","termid":"PBO:0077473"}


id: PBO:0057251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451b","termid":"PBO:0057251"}


id: GO:0032102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to external stimulus","synonyms":[{"name":"down regulation of response to external stimulus","type":"exact"},{"name":"down-regulation of response to external stimulus","type":"exact"},{"name":"downregulation of response to external stimulus","type":"exact"},{"name":"inhibition of response to external stimulus","type":"narrow"}],"termid":"GO:0032102"}


id: PBO:0003595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Sfi1","termid":"PBO:0003595"}


id: GO:0120080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:20705471","GOC:mah","PMID:8621557"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microfilament motor activity (obsolete GO:0120080)","synonyms":[{"name":"down regulation of actin-activated ATPase activity","type":"related"},{"name":"down regulation of actin-dependent ATPase activity","type":"exact"},{"name":"inhibition of actin-activated ATPase activity","type":"narrow"},{"name":"inhibition of actin-dependent ATPase activity","type":"narrow"},{"name":"negative regulation of actin filament motor activity","type":"exact"},{"name":"negative regulation of actin-activated ATPase activity","type":"related"},{"name":"negative regulation of actin-dependent ATPase activity","type":"related"},{"name":"negative regulation of actin-filament motor activity","type":"exact"},{"name":"negative regulation of muscle motor activity","type":"narrow"},{"name":"negative regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120080"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: PBO:0090773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomembrane system protein, FAR-17a/AIG1-like family protein, human AIG1 and ADTRP ortholog","termid":"PBO:0090773"}


id: GO:0003994
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74911,75426],"is_not":false,"summary":null,"term":"GO:0003994"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.","definition_xrefs":["GOC:pde","EC:4.2.1.3","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aconitate hydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10336","GO:0052632","MetaCyc:RXN-14047","Reactome:R-HSA-5690911","Reactome:R-HSA-70971"],"synonyms":[{"name":"aconitase activity","type":"exact"},{"name":"cis-aconitase activity","type":"related"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"related"}],"termid":"GO:0003994","terms_by_termid":{"GO:0003994":null}}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: GO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R7cell differentiation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell differentiation","synonyms":[{"name":"down regulation of R7 differentiation","type":"exact"},{"name":"down-regulation of R7 differentiation","type":"exact"},{"name":"downregulation of R7 differentiation","type":"exact"},{"name":"inhibition of R7 differentiation","type":"narrow"},{"name":"negative regulation of R7 differentiation","type":"exact"}],"termid":"GO:0045677"}


id: MOD:00744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification containing a molybdenum atom in a pterin ring system.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum containing modified residue","termid":"MOD:00743"},{"relation_name":"is_a","term_name":"pterin modified residue","termid":"MOD:00748"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum pterin containing modification","synonyms":[{"name":"MoPterRes","type":"exact"}],"termid":"MOD:00744"}


id: GO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Myogenic Regulatory Factor (MRF), a member of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors.","definition_xrefs":["PMID:10966875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bHLH transcription factor binding","termid":"GO:0043425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MRF binding","secondary_identifiers":["GO:0051578","GO:0051576","GO:0051579","GO:0051577"],"synonyms":[{"name":"Mrf4 binding","type":"narrow"},{"name":"Myf5 binding","type":"narrow"},{"name":"MyoD binding","type":"narrow"},{"name":"myogenin binding","type":"narrow"}],"termid":"GO:0043426"}


id: PBO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1","termid":"PBO:0044887"}


id: GO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060160"}


id: PBO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 11","termid":"PBO:0045156"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: PBO:0117104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM47 antisense RNA 1","termid":"PBO:0117104"}


id: PBO:0051817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 2","termid":"PBO:0051817"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: GO:0031726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR1 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CCR1 chemokine receptor binding","synonyms":[{"name":"CCR1 chemokine receptor ligand","type":"narrow"},{"name":"macrophage inflammatory protein-1 alpha receptor binding","type":"exact"}],"termid":"GO:0031726"}


id: PBO:0048296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigaxonin","termid":"PBO:0048296"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-quadruplex DNA binding (obsolete GO:1905495)","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: PBO:0052303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH-type splicing regulatory protein pseudogene 1","termid":"PBO:0052303"}


id: MONDO:0032625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 21","secondary_identifiers":["UMLS:C4748792","OMIM:618242","GARD:16327","DOID:0112088","MEDGEN:1648383"],"synonyms":[{"name":"MC1DN21","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 21","type":"related"}],"termid":"MONDO:0032625","xrefs":{"Monarch":{"xref_id":"0032625"}}}


id: MONDO:0100537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"plasminogen deficiency, type II","synonyms":[{"name":"plasminogen deficiency, type 2","type":"exact"}],"termid":"MONDO:0100537","xrefs":{"Monarch":{"xref_id":"0100537"}}}


id: PBO:0053924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1221","termid":"PBO:0053924"}


id: PBO:0080392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 retromer complex component A","termid":"PBO:0080392"}


id: PBO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase (predicted)","termid":"PBO:0000311"}


id: GO:1905075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"positively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tight junction disassembly","synonyms":[{"name":"activation of occluding cell junction disassembly","type":"narrow"},{"name":"activation of occluding junction disassembly","type":"narrow"},{"name":"activation of tight junction disassembly","type":"narrow"},{"name":"positive regulation of occluding cell junction disassembly","type":"exact"},{"name":"positive regulation of occluding junction disassembly","type":"exact"},{"name":"up regulation of occluding cell junction disassembly","type":"exact"},{"name":"up regulation of tight junction disassembly","type":"exact"},{"name":"up-regulation of occluding cell junction disassembly","type":"exact"},{"name":"up-regulation of tight junction disassembly","type":"exact"},{"name":"upregulation of occluding cell junction disassembly","type":"exact"},{"name":"upregulation of tight junction disassembly","type":"exact"}],"termid":"GO:1905075"}


id: FYPO:0004849
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119262,119261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["PomBase:mah","GO:0019538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal protein metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular protein metabolic process","type":"exact"},{"name":"normal protein metabolism","type":"exact"}],"termid":"FYPO:0004849","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0070006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1303, pseudogene","termid":"PBO:0070006"}


id: GO:0031829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 4 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 4 receptor binding","type":"exact"},{"name":"type 4 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031829"}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["PubMed:7801126","RESID:AA0077","PubMed:2498336","PubMed:7939682","Unimod:47#K","OMSSA:93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: PBO:0063776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 3","termid":"PBO:0063776"}


id: MONDO:1040055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant or variants in the PRPH2 gene.","definition_xrefs":["PMID:25447119","PMID:26061163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPH2-related retinopathy","synonyms":[{"name":"PRPH2-related retinopathy","type":"exact"}],"termid":"MONDO:1040055","xrefs":{"Monarch":{"xref_id":"1040055"}}}


id: MONDO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the skull base.","definition_xrefs":["NCIT:C4676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skull base neoplasm","secondary_identifiers":["MEDGEN:138208","UMLS:C0376527","DOID:3842","MESH:D019292"],"synonyms":[{"name":"basicranium neoplasm","type":"exact"},{"name":"basicranium neoplasm (disease)","type":"exact"},{"name":"basicranium tumor","type":"exact"},{"name":"basicranium tumour","type":"exact"},{"name":"neoplasm of basicranium","type":"exact"},{"name":"neoplasm of skull base","type":"exact"},{"name":"neoplasm of the skull base","type":"exact"},{"name":"skull base cancer","type":"related"},{"name":"skull base neoplasm","type":"exact"},{"name":"skull base tumor","type":"exact"},{"name":"skull base tumour","type":"exact"},{"name":"tumor of basicranium","type":"exact"},{"name":"tumor of skull base","type":"exact"},{"name":"tumor of the skull base","type":"exact"},{"name":"tumors of skull base","type":"exact"},{"name":"tumour of basicranium","type":"exact"},{"name":"tumour of skull base","type":"exact"},{"name":"tumour of the skull base","type":"exact"},{"name":"tumours of skull base","type":"exact"}],"termid":"MONDO:0002785","xrefs":{"Monarch":{"xref_id":"0002785"}}}


id: MONDO:0014376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism","secondary_identifiers":["UMLS:C4014528","MEDGEN:862965","DOID:0070057","GARD:16023","OMIM:615866"],"synonyms":[{"name":"CSS9","type":"exact"},{"name":"Coffin-Siris syndrome 9","type":"exact"},{"name":"MRD27","type":"exact"},{"name":"autosomal dominant intellectual disability 27","type":"exact"},{"name":"autosomal dominant mental retardation 27","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 27","type":"related"},{"name":"intellectual disability, autosomal dominant 27","type":"exact"},{"name":"intellectual disability, autosomal dominant type 27","type":"exact"},{"name":"mental retardation, autosomal dominant 27","type":"related"},{"name":"mental retardation, autosomal dominant type 27","type":"exact"}],"termid":"MONDO:0014376","xrefs":{"Monarch":{"xref_id":"0014376"}}}


id: MONDO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare bone disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease (obsolete MONDO:0019684)","secondary_identifiers":["Orphanet:93419"],"synonyms":[{"name":"rare bone disease","type":"exact"}],"termid":"MONDO:0019684","xrefs":{"Monarch":{"xref_id":"0019684"}}}


id: GO:0140526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly of a cytoplasmic viral factory consisting of a double-membrane bound vesicle.","definition_xrefs":["PMID:32555292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"double membrane vesicle viral factory assembly","termid":"GO:0140526"}


id: FYPO:0003738
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119149],"is_not":false,"summary":null,"term":"FYPO:0003738"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, but show no other signs of having entered mitosis or M phase, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0003738","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003738":null}}


id: PBO:0065053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 7","termid":"PBO:0065053"}


id: PBO:0066137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retina and anterior neural fold homeobox 2","termid":"PBO:0066137"}


id: PBO:0062366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 1 pseudogene","termid":"PBO:0062366"}


id: MONDO:0017100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neutropenia-monocytopenia-deafness syndrome is characterized by neutropenia with myeloid marrow hypoplasia, monocytopenia, and congenital deafness. It has been described in three siblings who suffered recurrent bacterial infections.","definition_xrefs":["Orphanet:2690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"neutropenia-monocytopenia-deafness syndrome","secondary_identifiers":["UMLS:C4518430","MEDGEN:1383523","GARD:3982"],"termid":"MONDO:0017100","xrefs":{"Monarch":{"xref_id":"0017100"}}}


id: PBO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.2.3","termid":"PBO:0000569"}


id: FYPO:0006702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of adenine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular adenine level","synonyms":[{"name":"decreased cellular adenine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular adenine level during vegetative growth","type":"exact"},{"name":"reduced cellular adenine level","type":"exact"}],"termid":"FYPO:0006702"}


id: FYPO:0006412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone gene mRNA during vegetative growth","termid":"FYPO:0004906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"decreased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"decreased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"decreased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased level of histone gene transcripts during mitotic S phase","type":"exact"},{"name":"reduced level of histone gene mRNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0006412"}


id: PBO:0057033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-1","termid":"PBO:0057033"}


id: GO:1901498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetralin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tetralin","termid":"GO:1901498"}


id: GO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["PMID:8662823","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C chemokine receptor activity","termid":"GO:0016493"}


id: PBO:0111945
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0111945"}


id: PBO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_decamethylenediguanidine","termid":"PBO:0030265"}


id: GO:0070772
data:
  {"annotated_genes":["SJAG_02289","SJAG_01236","SJAG_02665","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81895,87181,109560,113149],"is_not":false,"summary":null,"term":"GO:0070772"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol kinase complex that contains a phosphatidylinositol-3-phosphate 5-kinase subunit (Fab1p in yeast; PIKFYVE in mammals), a kinase activator, and a phosphatase, and may also contain additional proteins; it is involved in regulating the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate. In mammals the complex is composed of PIKFYVE, FIG4 and VAC14. In yeast it is composed of Atg18p, Fig4p, Fab1p, Vac14p and Vac7p.","definition_xrefs":["PMID:19037259","PMID:18950639","PMID:19158662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_01236":null,"SJAG_02289":null,"SJAG_02665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PAS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"autophagy-specific phosphatidylinositol 3-kinase complex","type":"related"}],"termid":"GO:0070772","terms_by_termid":{"GO:0070772":null}}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: GO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of cysteine to form peptidyl-S-diphytanylglycerol diether-L-cysteine.","definition_xrefs":["RESID:AA0223","PMID:7797461"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-diphytanylglycerol diether-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018115)","synonyms":[{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diphytanylglycerol diether-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018115"}


id: GO:0170013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.","definition_xrefs":["PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"channel complex","termid":"GO:0170013"}


id: FYPO:0003392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquinone binding","termid":"FYPO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased ubiquinone binding","synonyms":[{"name":"decreased coenzyme Q binding","type":"exact"},{"name":"reduced ubiquinone binding","type":"exact"}],"termid":"FYPO:0003392"}


id: GO:0048094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male pigmentation","termid":"GO:0048094"}


id: MONDO:0013588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the CLPP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0006025","MONDO:0005047","MONDO:0005066"],"is_obsolete":false,"name":"Perrault syndrome 3","secondary_identifiers":["OMIM:614129","MEDGEN:814744","GARD:15760","UMLS:C3808414"],"synonyms":[{"name":"CLPP Perrault syndrome","type":"exact"},{"name":"PRLTS3","type":"related"},{"name":"Perrault syndrome 3","type":"exact"},{"name":"Perrault syndrome caused by mutation in CLPP","type":"exact"},{"name":"Perrault syndrome type 3","type":"exact"},{"name":"deafness, autosomal recessive 81","type":"related"},{"name":"deafness, autosomal recessive 81, formerly","type":"related"}],"termid":"MONDO:0013588","xrefs":{"Monarch":{"xref_id":"0013588"}}}


id: PBO:0039622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A5","termid":"PBO:0039622"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: MONDO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile myasthenia gravis (MG) is a rare form of MG, an autoimmune disorder of the neuromuscular junction resulting in ocular manifestations or generalized weakness, with onset before 18 years of age.","definition_xrefs":["Orphanet:391497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"juvenile myasthenia gravis","secondary_identifiers":["MEDGEN:1842990","UMLS:C5680023","GARD:21624"],"synonyms":[{"name":"childhood myasthenia gravis","type":"exact"},{"name":"juvenile acquired myasthenia","type":"exact"},{"name":"juvenile autoimmune myasthenia gravis","type":"exact"},{"name":"myasthenia gravis of childhood","type":"exact"},{"name":"paediatric myasthenia gravis","type":"exact"},{"name":"pediatric myasthenia gravis","type":"exact"}],"termid":"MONDO:0018325","xrefs":{"Monarch":{"xref_id":"0018325"}}}


id: PR:O74417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC14G10.04 gene.","definition_xrefs":["UniProtKB:O74417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.04","synonyms":[{"name":"Spom972h-SPCC14G10.04","type":"exact"}],"termid":"PR:O74417"}


id: GO:0009647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The control of plant growth, development, and differentiation in response to growth in darkness.","definition_xrefs":["PMID:15012288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skotomorphogenesis","synonyms":[{"name":"etiolation","type":"related"}],"termid":"GO:0009647"}


id: GO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonyl-L-leucine + H2O + H+ = L-leucine + benzyl alcohol + CO2.","definition_xrefs":["EC:3.5.1.64","RHEA:18901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N(alpha)-benzyloxycarbonylleucine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02552","MetaCyc:3.5.1.64-RXN"],"synonyms":[{"name":"alpha-N-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylleucine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase IV","type":"related"},{"name":"nalpha-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonylleucine hydrolase activity","type":"related"}],"termid":"GO:0047413"}


id: GO:0006970
data:
  {"annotated_genes":["SJAG_03893","SJAG_03815","SJAG_00596","SJAG_00409","SJAG_04205","SJAG_04567","SJAG_04726","SJAG_02592","SJAG_02091","SJAG_02342","SJAG_04668","SJAG_01084","SJAG_02883","SJAG_00661","SJAG_02389","SJAG_03185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[88976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[91365,115885,116687,104066,102321,93844,114064,59337,106053,95466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[99690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[62861,81444,109584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009651"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to osmotic stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"osmotic response","type":"exact"},{"name":"osmotic stress response","type":"exact"}],"termid":"GO:0006970","terms_by_termid":{"GO:0009651":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: PBO:0002542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim13 (predicted)","termid":"PBO:0002542"}


id: GO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-cysteine metabolic process","synonyms":[{"name":"D-cysteine metabolism","type":"exact"}],"termid":"GO:0046438"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine (obsolete GO:0018297)","termid":"GO:0018297"}


id: PBO:0044400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 61, pseudogene","termid":"PBO:0044400"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: PBO:0113742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 5","termid":"PBO:0113742"}


id: PBO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transmembrane transporter Liz1","termid":"PBO:0018038"}


id: PBO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase deficiency","termid":"PBO:0003308"}


id: PBO:0027927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone_and_nitrogen_starvation","termid":"PBO:0027927"}


id: FYPO:0007782
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118819,118820,118821,118822,118823,118824,118826,118827,118847,118851],"is_not":false,"summary":null,"term":"FYPO:0007782"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth does not occur under conditions that normally induce it.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02771":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"abolished hyphal transition","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_00429","SJAG_00364","SJAG_02771","SJAG_02266","SJAG_02576","SJAG_01205","SJAG_01680","SJAG_01605"],"single_locus_genotype_uniquenames":["rad9delta","crb2delta","rad26delta","rad24delta","chk1delta","rad3delta","rad1delta","rad25delta"],"synonyms":[{"name":"abolished transition to hyphal growth","type":"exact"},{"name":"hyphal transition abolished","type":"exact"}],"termid":"FYPO:0007782","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0005602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin forming regions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:25356590","PMID:27183912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal subtelomeric heterochromatin RNA level","synonyms":[{"name":"normal subtelomere-derived RNA level","type":"exact"},{"name":"normal subtelomere-derived RNA level during vegetative growth","type":"exact"},{"name":"normal subtelomere-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0005602"}


id: GO:1905414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"negatively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of dense core granule exocytosis","synonyms":[{"name":"down regulation of dense core granule exocytosis","type":"exact"},{"name":"down regulation of dense core vesicle exocytosis","type":"exact"},{"name":"down-regulation of dense core granule exocytosis","type":"exact"},{"name":"down-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"downregulation of dense core granule exocytosis","type":"exact"},{"name":"downregulation of dense core vesicle exocytosis","type":"exact"},{"name":"inhibition of dense core granule exocytosis","type":"narrow"},{"name":"inhibition of dense core vesicle exocytosis","type":"narrow"},{"name":"negative regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905414"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: GO:0009683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid metabolic process","synonyms":[{"name":"IAA metabolic process","type":"exact"},{"name":"indole acetic acid metabolic process","type":"exact"},{"name":"indole acetic acid metabolism","type":"exact"},{"name":"indoleacetic acid metabolism","type":"exact"}],"termid":"GO:0009683"}


id: PBO:0062011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily K member 2","termid":"PBO:0062011"}


id: PBO:0049570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 7","termid":"PBO:0049570"}


id: GO:0102704
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61357],"is_not":false,"summary":null,"term":"GO:0102704"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose(2-) + a (mannosyl)2-(N-acetylglucosaminyl)2-diphosphodolichol = H+ + GDP(3-) + a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol.","definition_xrefs":["EC:2.4.1.257","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid 1,6-alpha-mannosyltransferase activity","termid":"GO:0033164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:29519","MetaCyc:RXN-5463"],"termid":"GO:0102704","terms_by_termid":{"GO:0102704":null}}


id: PBO:0073362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family F member 2","termid":"PBO:0073362"}


id: PBO:0087541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate","termid":"PBO:0087541"}


id: MONDO:0011709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split-hand/foot malformation mapped to chromosome 2q31.","definition_xrefs":["NCIT:C75002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 5","secondary_identifiers":["MEDGEN:338277","MESH:C564674","OMIM:606708","UMLS:C1847622","GARD:15398","DOID:0090022"],"synonyms":[{"name":"SHFM5","type":"exact"},{"name":"split hand-foot malformation type 5","type":"exact"},{"name":"split-hand/foot malformation 5","type":"related"},{"name":"split-hand/foot malformation type 5","type":"exact"}],"termid":"MONDO:0011709","xrefs":{"Monarch":{"xref_id":"0011709"}}}


id: MONDO:1011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, domestic cat","secondary_identifiers":["OMIA:000712-9685"],"termid":"MONDO:1011048","xrefs":{"Monarch":{"xref_id":"1011048"}}}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: PBO:0048716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLR5 pseudogene 2","termid":"PBO:0048716"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: PBO:0079423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 6","termid":"PBO:0079423"}


id: FYPO:0002979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to MMS","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002979"}


id: FYPO:0007617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium azide (NaN3). Cells stop growing (and may die) at a concentration of sodium azide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium azide","synonyms":[{"name":"sensitive to NaN3","type":"exact"},{"name":"sensitive to sodium azide during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium azide during vegetative growth","type":"exact"}],"termid":"FYPO:0007617"}


id: MONDO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 73","secondary_identifiers":["GARD:17988","UMLS:C5193065","DOID:0112209","MEDGEN:1681654","Orphanet:544503","OMIM:618379"],"synonyms":[{"name":"DEE73","type":"exact"},{"name":"developmental and epileptic encephalopathy 73","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 73","type":"exact"},{"name":"rnf13-related severe early-onset epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0034106","xrefs":{"Monarch":{"xref_id":"0034106"}}}


id: GO:1905200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gibberellic acid across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:27139299","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gibberellic acid transmembrane transport","termid":"GO:1905200"}


id: GO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.","definition_xrefs":["GOC:dph","GOC:jp","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0004857","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor activity","termid":"GO:0090369"}


id: GO:1903067
data:
  {"annotated_genes":["SJAG_02392","SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90429,95348],"is_not":false,"summary":null,"term":"GO:1903067"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24554432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01373":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to cell tip","type":"exact"},{"name":"down regulation of protein localization to cell tip","type":"exact"},{"name":"down-regulation of protein localisation to cell tip","type":"exact"},{"name":"down-regulation of protein localization to cell tip","type":"exact"},{"name":"downregulation of protein localisation to cell tip","type":"exact"},{"name":"downregulation of protein localization to cell tip","type":"exact"},{"name":"inhibition of protein localisation to cell tip","type":"narrow"},{"name":"inhibition of protein localization to cell tip","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip","type":"exact"}],"termid":"GO:1903067","terms_by_termid":{"GO:1903067":null}}


id: MONDO:0019951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rigid spine syndrome (RSS) is a slowly progressive childhood-onset congenital muscular dystrophy characterized by contractures of the spinal extensor muscles associated with abnormal posture (limitation of neck and trunk flexure), progressive scoliosis of the spine, early marked cervico-axial muscle weakness with relatively preserved strength and function of the extremities and progressive respiratory insufficiency.","definition_xrefs":["Orphanet:97244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"rigid spine syndrome","secondary_identifiers":["GARD:4723","MESH:C535683","icd11.foundation:801727141"],"synonyms":[{"name":"desmin-related myopathies with Mallory bodies","type":"related"},{"name":"muscular dystrophy, congenital, merosin positive with early spine rigidity","type":"related"},{"name":"rigid spine congenital muscular dystrophy","type":"exact"},{"name":"rigid spine muscular dystrophy-1","type":"related"}],"termid":"MONDO:0019951","xrefs":{"Monarch":{"xref_id":"0019951"}}}


id: SO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000780 transposable_element_attribute (obsolete SO:0000780)","termid":"SO:0000780"}


id: PBO:0083078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl-peptidase III; cleaves dipeptides from the amino terminus of target proteins; highly active on synthetic substrate Arg-Arg-2-naphthylamide; mammalian ortholog may be a biomarker for some cancers","termid":"PBO:0083078"}


id: PBO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A3","termid":"PBO:0046095"}


id: GO:0003984
data:
  {"annotated_genes":["SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77829],"is_not":false,"summary":null,"term":"GO:0003984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2 pyruvate = (2S)-2-acetolactate + CO2. Can also convert 2-oxobutanoate and pyruvate to (S)-2-ethyl-2-hydroxy-3-oxobutanoate.","definition_xrefs":["EC:2.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"acetolactate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETOLACTSYN-RXN"],"synonyms":[{"name":"acetohydroxy acid synthetase activity","type":"related"},{"name":"acetohydroxyacid synthase activity","type":"related"},{"name":"acetolactate pyruvate-lyase (carboxylating) activity","type":"related"},{"name":"acetolactic synthetase activity","type":"related"},{"name":"alpha-acetohydroxy acid synthetase activity","type":"related"},{"name":"alpha-acetohydroxyacid synthase activity","type":"related"},{"name":"alpha-acetolactate synthase activity","type":"related"},{"name":"alpha-acetolactate synthetase activity","type":"related"},{"name":"pyruvate:pyruvate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0003984","terms_by_termid":{"GO:0003984":null}}


id: MONDO:0032568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with macrocephaly, seizures, and speech delay","secondary_identifiers":["MEDGEN:1648339","OMIM:618158","UMLS:C4748428"],"synonyms":[{"name":"IDDMSSD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH MACROCEPHALY, SEIZURES, AND SPEECH DELAY","type":"related"}],"termid":"MONDO:0032568","xrefs":{"Monarch":{"xref_id":"0032568"}}}


id: PR:O59762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gnr1 gene.","definition_xrefs":["UniProtKB:O59762","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein negative regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.09","synonyms":[{"name":"G protein negative regulator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gnr1","type":"exact"},{"name":"WD repeat-containing protein gnr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59762"}


id: PBO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin responsive transcription factor Prz1","termid":"PBO:0000589"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: GO:0046168
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63823,70828],"is_not":false,"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate catabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycerol-3-phosphate breakdown","type":"exact"},{"name":"glycerol-3-phosphate catabolism","type":"exact"},{"name":"glycerol-3-phosphate degradation","type":"exact"}],"termid":"GO:0046168","terms_by_termid":{"GO:0046168":null}}


id: MONDO:0956965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the absence of TP53 mutations.","definition_xrefs":["DOID:0080705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 wild-type","secondary_identifiers":["NCIT:C129443"],"termid":"MONDO:0956965","xrefs":{"Monarch":{"xref_id":"0956965"}}}


id: PBO:0077966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 18-2","termid":"PBO:0077966"}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: PBO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 68","termid":"PBO:0071227"}


id: MONDO:0012816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the NPPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 6","secondary_identifiers":["GARD:15544","MESH:C567400","OMIM:612201","MEDGEN:394252","UMLS:C2677294"],"synonyms":[{"name":"ATFB6","type":"related"},{"name":"NPPA familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 6","type":"exact"},{"name":"atrial fibrillation, familial, type 6","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in NPPA","type":"exact"}],"termid":"MONDO:0012816","xrefs":{"Monarch":{"xref_id":"0012816"}}}


id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: PBO:0054328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1721","termid":"PBO:0054328"}


id: PBO:0091178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase Msm1","termid":"PBO:0091178"}


id: PBO:0083273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083273"}


id: GO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044085"],"is_obsolete":false,"name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"}


id: PBO:0049682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase","termid":"PBO:0049682"}


id: GO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a phosphate group on to the translation initiation factor eIF2alpha, as a result of endoplasmic reticulum stress.","definition_xrefs":["PMID:14676213","GOC:bf","GOC:PARL","PMID:16835242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","synonyms":[{"name":"eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0036492"}


id: PBO:0030580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_glutamine_level","termid":"PBO:0030580"}


id: PBO:0082177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082177"}


id: CHEBI:16027
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP","termid":"CHEBI:16027"}


id: MONDO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"total circumpapillary dystrophy of choroid","secondary_identifiers":["MEDGEN:509705","ICD9:363.52","DOID:9842","SCTID:59753003","UMLS:C0154896"],"synonyms":[{"name":"circumpapillary dystrophy of choroid, total","type":"exact"}],"termid":"MONDO:0004898","xrefs":{"Monarch":{"xref_id":"0004898"}}}


id: GO:0015009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"corrin metabolic process","synonyms":[{"name":"corrin metabolism","type":"exact"}],"termid":"GO:0015009"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: MONDO:0013727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 1","secondary_identifiers":["UMLS:C3280670","MEDGEN:482300","OMIM:614389"],"synonyms":[{"name":"F5 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL1","type":"related"},{"name":"Rpl","type":"related"},{"name":"Rprgl","type":"related"},{"name":"abortion, spontaneous, recurrent","type":"related"},{"name":"embryonic loss, recurrent","type":"related"},{"name":"fetal loss, recurrent, susceptibility to","type":"related"},{"name":"foetal loss, recurrent, susceptibility to","type":"related"},{"name":"miscarriage, recurrent","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F5","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 1","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 1","type":"exact"},{"name":"stillbirth, recurrent","type":"related"}],"termid":"MONDO:0013727","xrefs":{"Monarch":{"xref_id":"0013727"}}}


id: GO:0000395
data:
  {"annotated_genes":["SJAG_02279","SJAG_02304","SJAG_01440","SJAG_04911","SJAG_01654","SJAG_01870","SJAG_05009","SJAG_03983","SJAG_04214","SJAG_00147","SJAG_01015","SJAG_01301","SJAG_03469","SJAG_02843","SJAG_04163","SJAG_00058"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81186,91041,93478,94421,94678,95099,97342,102076,102237,105426,109640,110203,110217,111955,112867,114846],"is_not":false,"summary":null,"term":"GO:0000395"}]},"cv_name":"biological_process","definition":"Recognition of the intron 5'-splice site by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splice site recognition","termid":"GO:0006376"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0065003","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA 5'-splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000368","GO:0000369"],"synonyms":[{"name":"U12-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U12-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"nuclear mRNA 5' splice site recognition","type":"exact"},{"name":"nuclear mRNA 5'-splice site recognition","type":"exact"},{"name":"spliceosomal CC complex biosynthesis","type":"narrow"},{"name":"spliceosomal CC complex formation","type":"narrow"},{"name":"spliceosomal E complex biosynthesis","type":"narrow"},{"name":"spliceosomal E complex formation","type":"narrow"},{"name":"spliceosomal commitment complex biosynthesis","type":"narrow"},{"name":"spliceosomal commitment complex formation","type":"narrow"}],"termid":"GO:0000395","terms_by_termid":{"GO:0000395":null}}


id: PBO:0064653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 3","termid":"PBO:0064653"}


id: GO:0102851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:0-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:0-phosphatidylglycerol desaturase activity (obsolete GO:0102851)","termid":"GO:0102851"}


id: GO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune system process","synonyms":[{"name":"activation of immune system process","type":"narrow"},{"name":"stimulation of immune system process","type":"narrow"},{"name":"up regulation of immune system process","type":"exact"},{"name":"up-regulation of immune system process","type":"exact"},{"name":"upregulation of immune system process","type":"exact"}],"termid":"GO:0002684"}


id: MONDO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without variable brain abnormalities; NEDBA","secondary_identifiers":["MEDGEN:1675664","OMIM:618443","UMLS:C5193102"],"synonyms":[{"name":"NEDBA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT VARIABLE BRAIN ABNORMALITIES","type":"related"}],"termid":"MONDO:0032755","xrefs":{"Monarch":{"xref_id":"0032755"}}}


id: GO:2000989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemicellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"negatively_regulates","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemicellulose catabolic process","synonyms":[{"name":"negative regulation of hemicellulose catabolism","type":"exact"}],"termid":"GO:2000989"}


id: GO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"positive regulation of proteolysis involved in protein catabolic process","termid":"GO:1903052"},{"relation_name":"positively_regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteolysis associated with antigen processing and presentation","synonyms":[{"name":"activation of proteolysis associated with antigen processing and presentation","type":"narrow"},{"name":"stimulation of proteolysis associated with antigen processing and presentation","type":"narrow"},{"name":"up regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"up-regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"upregulation of proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002630"}


id: PBO:0049002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1","termid":"PBO:0049002"}


id: MONDO:1010772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, dog","secondary_identifiers":["OMIA:001188-9615"],"termid":"MONDO:1010772","xrefs":{"Monarch":{"xref_id":"1010772"}}}


id: MONDO:0100376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(9;11)(p21.3;q23.3). (A cytogenetic abnormality that refers to the translocation of the short arm (p21.3) of chromosome 9 and the long arm (q23.3) of chromosome 11. It is associated with the development of acute myeloid leukemia with the MLLT3-MLL fusion gene transcript.)","definition_xrefs":["NCIT:C36370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(9;11)(p21.3;q23.3)","synonyms":[{"name":"AML, t(9;11)(p21.3;q23.3)","type":"exact"},{"name":"AML, t(9;11)(p22;q23)","type":"exact"}],"termid":"MONDO:0100376","xrefs":{"Monarch":{"xref_id":"0100376"}}}


id: PBO:0075680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide quinone oxidoreductase","termid":"PBO:0075680"}


id: MONDO:0958342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect during embryogenesis characterized by congenital absence of the optic nerve head, optic nerve fibers, retinal ganglion cells, and retinal blood vessels in a malformed eye. It often occurs unilaterally with otherwise normal brain development. In bilateral cases it is accompanied by other central nervous system malformations.","definition_xrefs":["Orphanet:637064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated optic nerve aplasia","secondary_identifiers":["MEDGEN:1836872","UMLS:C5816782"],"termid":"MONDO:0958342","xrefs":{"Monarch":{"xref_id":"0958342"}}}


id: GO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an esterosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"esterosome lumen","termid":"GO:0034467"}


id: PBO:0038562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3 binding protein","termid":"PBO:0038562"}


id: PBO:0075687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf2 related CREBBP activator protein","termid":"PBO:0075687"}


id: GO:1904393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904393"}


id: GO:0141087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"positive regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141087"}


id: PBO:0116706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BS member 1","termid":"PBO:0116706"}


id: PR:O43007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.08","synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade9","type":"exact"}],"termid":"PR:O43007"}


id: PBO:0075551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striated muscle enriched protein kinase","termid":"PBO:0075551"}


id: PBO:0040291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting family member beta 4","termid":"PBO:0040291"}


id: PBO:0112695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phosphate exporter Spx2/Xpr1","termid":"PBO:0112695"}


id: GO:0051899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["Wikipedia:Depolarization","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","secondary_identifiers":["Reactome:R-HSA-112308"],"termid":"GO:0051899"}


id: PBO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 antisense RNA 1","termid":"PBO:0061444"}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["SCTID:31367003","UMLS:C0751101","DOID:13664","ICD9:323.51","MEDGEN:152946"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: PBO:0069979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1274, pseudogene","termid":"PBO:0069979"}


id: SO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence that in the normal state of the chromosome corresponds to an unfolded, un-complexed stretch of double-stranded DNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open_chromatin_region","synonyms":[{"name":"open chromatin region","type":"exact"}],"termid":"SO:0001747"}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["MEDGEN:897039","OMIM:616331","GARD:18548","DOID:0060765","UMLS:C4225363"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: _global:indirectly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_regulates","termid":"_global:indirectly_regulates"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_positively_regulates","secondary_identifiers":["RO:0002407"],"termid":"_global:indirectly_positively_regulates"}


id: PBO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly_during_vegetative_growth","termid":"PBO:0030879"}


id: MONDO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A broad classification of disorders which includes 6 subtypes (primary central sleep apnea, central sleep apnea due to Cheyne-Stokes breathing pattern, central sleep apnea due to medical condition not Cheyne-Stokes, central sleep apnea due to high-altitude periodic breathing, central sleep apnea due to drug or substance and primary sleep apnea of infancy) that are each characterized by interruptions in breathing while asleep. It is caused by improper signaling from the brainstem to respiratory muscles and is triggered by either hypoventilation or hyperventilation. In adults, this disorder may arise following a stroke, congestive heart failure, trauma, infection or the use of narcotic medications. It is more common in older males and may present as a co-morbid condition to obesity. Clinical signs include snoring, insomnia or hypersomnia, difficulty concentrating and fatigue. Recurrent episodes of hypoxia/hypoxemia have long-term detrimental effects on cardiovascular health.","definition_xrefs":["NCIT:C27169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sleep apnea syndrome","termid":"MONDO:0005296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central sleep apnea syndrome","secondary_identifiers":["MEDGEN:854402","MESH:D020182","ICD9:327.21","DOID:9220","SCTID:27405005","UMLS:C3887547"],"synonyms":[{"name":"Apneas, central","type":"related"},{"name":"Apneas, central sleep","type":"related"},{"name":"Breathings, central sleep-disordered","type":"related"},{"name":"alveolar hypoventilation, central","type":"related"},{"name":"alveolar hypoventilations, central","type":"related"},{"name":"apnea, central","type":"related"},{"name":"apnea, central sleep","type":"related"},{"name":"apnea, sleep, central","type":"related"},{"name":"breathing, central sleep-disordered","type":"related"},{"name":"central Apneas","type":"related"},{"name":"central alveolar hypoventilation","type":"related"},{"name":"central alveolar hypoventilation syndrome","type":"related"},{"name":"central apnea","type":"related"},{"name":"central sleep Apneas","type":"related"},{"name":"central sleep apnea","type":"related"},{"name":"central sleep apnea syndrome","type":"exact"},{"name":"central sleep apnea, primary","type":"narrow"},{"name":"central sleep apnea, secondary","type":"related"},{"name":"central sleep disordered breathing","type":"related"},{"name":"central sleep-disordered Breathings","type":"related"},{"name":"central sleep-disordered breathing","type":"related"},{"name":"hypoventilation, central alveolar","type":"related"},{"name":"hypoventilations, central alveolar","type":"related"},{"name":"ondine syndrome","type":"related"},{"name":"primary central sleep apnea","type":"narrow"},{"name":"secondary central sleep apnea","type":"narrow"},{"name":"sleep Apneas, central","type":"related"},{"name":"sleep apnea, lethal central","type":"related"},{"name":"sleep disordered breathing, central","type":"related"},{"name":"sleep-disordered Breathings, central","type":"related"},{"name":"sleep-disordered breathing, central","type":"related"}],"termid":"MONDO:0004731","xrefs":{"Monarch":{"xref_id":"0004731"}}}


id: PBO:0072652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 5","termid":"PBO:0072652"}


id: GO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-specific SMAD protein (obsolete GO:0005075)","synonyms":[{"name":"pathway-specific SMAD protein","type":"exact"}],"termid":"GO:0005075"}


id: GO:0044185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell late endosome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome membrane","termid":"GO:0044175"},{"relation_name":"part_of","term_name":"host cell late endosome","termid":"GO:0044184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome membrane","termid":"GO:0044185"}


id: PBO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 7","termid":"PBO:0044422"}


id: MONDO:0002954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial basal cell carcinoma of the skin characterized by the presence of lobules of basaloid cells which are separated by large distances and represent multifocal discrete tumors.","definition_xrefs":["NCIT:C4108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"superficial multifocal basal cell carcinoma","secondary_identifiers":["DOID:4300","SCTID:403914000","UMLS:C0334256","ICDO:8091/3","MEDGEN:87200"],"synonyms":[{"name":"multicentric basal cell carcinoma","type":"exact"},{"name":"multifocal superficial basal cell carcinoma","type":"exact"},{"name":"multifocal superficial basal cell carcinoma (morphologic abnormality)","type":"exact"},{"name":"superficial basal cell carcinoma","type":"related"},{"name":"superficial multicentric basal-cell carcinoma","type":"exact"},{"name":"superficial multifocal basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002954","xrefs":{"Monarch":{"xref_id":"0002954"}}}


id: MONDO:1011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease, non-human animal","termid":"MONDO:1011323","xrefs":{"Monarch":{"xref_id":"1011323"}}}


id: GO:0010858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium-dependent protein kinase, an enzyme which phosphorylates a protein in a calcium-dependent manner.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"}


id: PBO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030909"}


id: PBO:0084933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA N6-adenosine methyltransferase; essential for meiosis in S288C but dispensable for meiosis in SK1, mediates N6-adenosine methylation of bulk mRNA during the induction of sporulation which includes the meiotic regulators IME1, IME2 and IME4 itself; repressed in haploids via production of antisense IME4 transcripts; transcribed in diploid cells where antisense transcription is repressed; orthologous to human METTL3 (MT-A70)","termid":"PBO:0084933"}


id: PBO:0060660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural killer cell cytotoxicity receptor 3 ligand 1","termid":"PBO:0060660"}


id: PBO:0049205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 5","termid":"PBO:0049205"}


id: PBO:0059355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 3","termid":"PBO:0059355"}


id: GO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["PMID:9126742","PMID:8861902","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: PBO:0090443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sucrose/maltose:proton symporter Sut1","termid":"PBO:0090443"}


id: SO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed_pseudogene overlapped by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_processed_pseudogene","synonyms":[{"name":"transcribed processed pseudogene","type":"exact"}],"termid":"SO:0002109"}


id: MONDO:0008873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism","termid":"MONDO:0000060"},{"relation_name":"is_a","term_name":"microcephalic osteodysplastic primordial dwarfism types I and III","termid":"MONDO:0016994"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephalic osteodysplastic primordial dwarfism, type 3","secondary_identifiers":["GARD:15145","OMIM:210730","MESH:C537320","UMLS:C1859439","MEDGEN:349167"],"synonyms":[{"name":"Mopd 3","type":"related"},{"name":"Mopd, Caroline Crachami type","type":"related"},{"name":"Mopd, Sicilian fairy type","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, Caroline Crachami type","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, Sicilian fairy type","type":"related"},{"name":"microcephalic osteodysplastic primordial dwarfism, type III","type":"related"},{"name":"osteodysplastic primordial dwarfism, type 3","type":"related"}],"termid":"MONDO:0008873","xrefs":{"Monarch":{"xref_id":"0008873"}}}


id: GO:0110095
data:
  {"annotated_genes":["SJAG_02010","SJAG_01457","SJAG_04726","SJAG_02960","SJAG_05256","SJAG_01596","SJAG_04404","SJAG_04674","SJAG_02988","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112322],"is_not":false,"summary":null,"term":"GO:0110095"},{"annotations":[95029,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[76233,74599,102323,61677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[61426,104595,59614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of an aldehyde. These may include transport of aldehydes away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_01596":null,"SJAG_02010":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of aldehyde","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0110095","terms_by_termid":{"GO:0019243":null,"GO:0046294":null,"GO:0061727":null,"GO:0110095":null}}


id: PR:Q10331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup107 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02455","PANTHER:PTHR13003:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.01c","secondary_identifiers":["UniProtKB:Q10331"],"synonyms":[{"name":"Spom972h-NUP107","type":"exact"},{"name":"nuclear pore protein nup107 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10331"}


id: PBO:0059569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1M","termid":"PBO:0059569"}


id: GO:0022002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals that stops, prevents or reduces the frequency or rate at which a cell adopts an anterior neural cell fate, initiated by binding of Wnt protein to a receptor on the surface of the target cell.","definition_xrefs":["GOC:dgh","GOC:tb","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of anterior neural cell fate commitment of the neural plate by Wnt signaling pathway (obsolete GO:0022002)","synonyms":[{"name":"Wnt receptor signaling involved in down regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in down-regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in downregulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in inhibition of anterior neural cell fate of the neural plate","type":"narrow"},{"name":"Wnt receptor signaling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signalling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"negative regulation of anterior neural cell fate commitment of the neural plate by Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of anterior neural cell fate commitment of the neural plate by Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0022002"}


id: PBO:0066437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistin","termid":"PBO:0066437"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0067027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 40, pseudogene","termid":"PBO:0067027"}


id: PBO:0081808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 1, Y-linked","termid":"PBO:0081808"}


id: MONDO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed cryoglobulinemia (MC) is a rare multisystem disease characterized by the presence of circulating cryoprecipitable immune complexes in the serum, manifested clinically by a classical triad of purpura, weakness and arthralgia.","definition_xrefs":["Orphanet:91138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryoglobulinemic vasculitis","secondary_identifiers":["SCTID:190815001","OMIM:123550","NORD:1452","GARD:6386","MedDRA:10027756","icd11.foundation:55133785","MESH:C565141","UMLS:C1852456","ICD9:273.2","ICD10CM:D89.1","MEDGEN:343814"],"synonyms":[{"name":"MC","type":"exact"},{"name":"Meltzer syndrome","type":"related"},{"name":"Mixed Cryoglobulinemia","type":"exact"},{"name":"cryoglobulinemia, familial mixed","type":"related"},{"name":"essential cryoglobulinemia","type":"exact"},{"name":"essential mixed cryoglobulinemia","type":"exact"},{"name":"familial mixed cryoglobulinemia","type":"related"},{"name":"mixed cryoglobulinemia","type":"exact"},{"name":"primary cryoglobulinemia","type":"exact"}],"termid":"MONDO:0007407","xrefs":{"Monarch":{"xref_id":"0007407"}}}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: MONDO:0030475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 11, autosomal, with male infertility","secondary_identifiers":["UMLS:C5562019","MEDGEN:1794229","OMIM:619608"],"synonyms":[{"name":"HTX11","type":"exact"}],"termid":"MONDO:0030475","xrefs":{"Monarch":{"xref_id":"0030475"}}}


id: GO:0006988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor (obsolete GO:0006988)","synonyms":[{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"exact"}],"termid":"GO:0006988"}


id: PR:Q9HGL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.10c gene.","definition_xrefs":["UniProtKB:Q9HGL2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C800.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.10c","synonyms":[{"name":"Spom972h-SPBC800.10c","type":"exact"}],"termid":"PR:Q9HGL2"}


id: MONDO:0043089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute posterior multifocal placoid pigment epitheliopathy (APMPPE) is an acquired, inflammatory eye condition affecting the retina, retinal pigment epithelium (pigmented layer of the retina), and choroid. It usually affects both eyes and is characterized by multiple, yellow-white lesions in the back of the eye. The condition can significantly impair visual acuity if the macula is involved. APMPPE typically resolves on its own in weeks to months. While the cause is unknown, about a third of cases appear to develop after a flu-like illness. Non-ocular symptoms are uncommon, but cerebral vasculitis can be present and may cause permanent and/or severe neurological complications.","definition_xrefs":["GARD:0002183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"multifocal choroiditis","termid":"MONDO:0023833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute posterior multifocal placoid pigment epitheliopathy","secondary_identifiers":["NORD:1101","MEDGEN:56348","icd11.foundation:2036282532","UMLS:C0154884","GARD:2183","SCTID:89188001"],"synonyms":[{"name":"AMPPE","type":"related"},{"name":"APMPPE","type":"related"},{"name":"Epitheliopathy, Acute Posterior Multifocal Placoid Pigment","type":"exact"},{"name":"acute multifocal placoid pigment epitheliopathy","type":"related"},{"name":"acute placoid pigment epitheliopathy","type":"related"},{"name":"acute posterior multifocal placoid pigment epitheliopathy","type":"exact"},{"name":"amppe - acute multifocal placoid pigment epitheliopathy","type":"related"},{"name":"apmppe","type":"related"},{"name":"epitheliopathy, acute posterior multifocal placoid pigment","type":"related"},{"name":"multifocal placoid pigment epitheliopathy","type":"related"},{"name":"pigment epitheliopathy, disseminated retinitis and retinochoroiditis","type":"related"}],"termid":"MONDO:0043089","xrefs":{"Monarch":{"xref_id":"0043089"}}}


id: MONDO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy of infancy (obsolete MONDO:0019486)","termid":"MONDO:0019486","xrefs":{"Monarch":{"xref_id":"0019486"}}}


id: PBO:0075030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-41","termid":"PBO:0075030"}


id: MONDO:0958270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central precocious puberty in male","secondary_identifiers":["UMLS:C5816736","Orphanet:649929","MEDGEN:1853132"],"termid":"MONDO:0958270","xrefs":{"Monarch":{"xref_id":"0958270"}}}


id: PBO:0080077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 39","termid":"PBO:0080077"}


id: FYPO:0005564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter and thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thin stable microtubule bundle","termid":"FYPO:0005560"},{"relation_name":"is_a","term_name":"short stable microtubule bundle","termid":"FYPO:0005562"},{"relation_name":"is_a","term_name":"short disorganized microtubule bundle","termid":"FYPO:0005796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"short, thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length and thickness","type":"exact"},{"name":"short, thin Q-MT bundles","type":"exact"},{"name":"short, thin quiescent cell MT bundle","type":"exact"},{"name":"short, thin quiescent cell microtubule bundle","type":"exact"},{"name":"short, thin stable microtubule array","type":"related"},{"name":"short, thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005564"}


id: MONDO:0012314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any short QT syndrome in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome type 3","secondary_identifiers":["MEDGEN:400662","MESH:C566504","GARD:18635","OMIM:609622","UMLS:C1865018"],"synonyms":[{"name":"KCNJ2 short QT syndrome","type":"exact"},{"name":"SQT3","type":"related"},{"name":"short QT syndrome 3","type":"related"},{"name":"short QT syndrome caused by mutation in KCNJ2","type":"exact"},{"name":"short QT syndrome type 3","type":"exact"}],"termid":"MONDO:0012314","xrefs":{"Monarch":{"xref_id":"0012314"}}}


id: PBO:0029596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane_during_vegetative_growth","termid":"PBO:0029596"}


id: GO:0015535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fucose(out) + H+(out) = fucose(in) + H+(in).","definition_xrefs":["TC:2.A.1.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"fucose transmembrane transporter activity","termid":"GO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"fucose:proton symporter activity","secondary_identifiers":["RHEA:29023","MetaCyc:TRANS-RXN-20"],"synonyms":[{"name":"fucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015535"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: PBO:0090258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic ubiquitin ligase substrate adaptor Aly2","termid":"PBO:0090258"}


id: PBO:0089076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1","termid":"PBO:0089076"}


id: PBO:0062412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 39 pseudogene","termid":"PBO:0062412"}


id: GO:1902034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"down regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"down-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"downregulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"inhibition of hematopoietic stem cell proliferation","type":"narrow"},{"name":"inhibition of hemopoietic stem cell proliferation","type":"narrow"},{"name":"negative regulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902034"}


id: PBO:0091303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing of all introns, including intron IV, introduces stop codon that leads to production of mitochondrial hydrolase instead of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091303"}


id: PBO:0085933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; partially overlaps the uncharacterized ORF YGR017W","termid":"PBO:0085933"}


id: GO:0034384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964011"],"synonyms":[{"name":"HDL clearance","type":"exact"}],"termid":"GO:0034384"}


id: PBO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 10","termid":"PBO:0046608"}


id: FYPO:0008373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is normal (i.e. indistinguishable from wild-type) during a cellular response to salt stress.","definition_xrefs":["PomBase:pb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell surface during vegetative growth","termid":"FYPO:0008372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell surface during cellular response to salt stress","termid":"FYPO:0008373"}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: GO:0009396
data:
  {"annotated_genes":["SJAG_03224","SJAG_04156","SJAG_00106","SJAG_02408","SJAG_01126","SJAG_00529","SJAG_03275","SJAG_01616","SJAG_00815","SJAG_02225","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74322],"is_not":false,"summary":null,"term":"GO:0009396"},{"annotations":[107908,112000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[70010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[57126,61212,105633,107909,104331,112001,70640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[61214,105634,81574,72828,57125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[73975,70011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"pteridine-containing compound biosynthetic process","termid":"GO:0042559"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"folic acid-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"folate and derivative biosynthesis","type":"exact"},{"name":"folate and derivative biosynthetic process","type":"exact"},{"name":"folate-containing compound biosynthesis","type":"exact"},{"name":"folate-containing compound biosynthetic process","type":"exact"},{"name":"folic acid and derivative biosynthesis","type":"exact"},{"name":"folic acid and derivative biosynthetic process","type":"exact"},{"name":"folic acid-containing compound anabolism","type":"exact"},{"name":"folic acid-containing compound biosynthesis","type":"exact"},{"name":"folic acid-containing compound formation","type":"exact"},{"name":"folic acid-containing compound synthesis","type":"exact"},{"name":"vitamin B9 and derivative biosynthesis","type":"exact"},{"name":"vitamin B9 and derivative biosynthetic process","type":"exact"},{"name":"vitamin M and derivative biosynthesis","type":"exact"},{"name":"vitamin M and derivative biosynthetic process","type":"exact"}],"termid":"GO:0009396","terms_by_termid":{"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null}}


id: PBO:0083013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase; associates with lariat intermediates before the second catalytic step of splicing; mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes; required for proofreading the exon ligation reaction","termid":"PBO:0083013"}


id: SO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Describes the natural sequence variants due to polymorphisms, disease-associated mutations, RNA editing and variations between strains, isolates or cultivars.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"natural_variant_site","secondary_identifiers":["BS:00071"],"synonyms":[{"name":"natural_variant","type":"broad"},{"name":"sequence variation","type":"broad"},{"name":"variant","type":"broad"}],"termid":"SO:0001147"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","PMID:18216290","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: GO:0044512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044512)","synonyms":[{"name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044512"}


id: MOD:01346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-hexosyl-L-asparagine.","definition_xrefs":["PubMed:6540775","PubMed:11567090","PubMed:15279557","PubMed:11112526","Unimod:41#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hexosylated asparagine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01346"}


id: PBO:0045492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 10","termid":"PBO:0045492"}


id: GO:1990506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands during the mitotic cell cycle.","definition_xrefs":["PMID:16120966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA-templated DNA replication","synonyms":[{"name":"mitotic DNA-dependent DNA replication","type":"exact"}],"termid":"GO:1990506"}


id: GO:1902895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:24699545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of miRNA transcription","synonyms":[{"name":"activation of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of microRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"positive regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of primary miRNA gene transcription","type":"exact"},{"name":"up regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1902895"}


id: PBO:0045203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B13","termid":"PBO:0045203"}


id: PBO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 1","termid":"PBO:0050583"}


id: PBO:0065147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 3","termid":"PBO:0065147"}


id: PBO:0091931
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose-Specific Flocculation","termid":"PBO:0091931"}


id: PBO:0045879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 3","termid":"PBO:0045879"}


id: GO:1990390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:24768539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K33-linked ubiquitination","termid":"GO:1990390"}


id: PBO:0011427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Slx9 (predicted)","termid":"PBO:0011427"}


id: GO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport macromolecular complex of the chloroplast membrane that interacts with the precursor proteins and contains components of both the outer membrane and inner membrane complexes containing at least Toc75, Toc159, Toc34 and Tic110.","definition_xrefs":["PMID:28745032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"TOC-TIC supercomplex I","termid":"GO:0061927"}


id: GO:0102395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-cis-beta-carotene + O2 = 9-cis-10'-apo-beta-carotenal + beta-ionone.","definition_xrefs":["EC:1.13.11.68","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"9-cis-beta-carotene 9',10'-cleavage oxygenase activity","secondary_identifiers":["RHEA:34399","MetaCyc:RXN-13642"],"termid":"GO:0102395"}


id: MONDO:0022454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angiosarcoma of the scalp is a rare cancer which most commonly affects the elderly. This condition is characterized by bruise-like lesions that escalate to elevated, nodular, or ulcerated tumors. Extensive local growth is common and metastasis to regional lymph nodes and to the lungs may occur. The cause of angiosarcoma of the scalp is unknown, although several associations have been reported, including lymphedema, prior radiation treatment, and environmental exposures. Treatment may include surgery, radiation and chemotherapy.","definition_xrefs":["GARD:0005814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma of the scalp","synonyms":[{"name":"angiosarcoma (disease) of scalp","type":"exact"},{"name":"scalp angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0022454","xrefs":{"Monarch":{"xref_id":"0022454"}}}


id: PBO:0081937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 1","termid":"PBO:0081937"}


id: PBO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ODC1 divergent transcript","termid":"PBO:0061797"}


id: GO:0017107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The binding activity of a molecule that brings together an anion exchanger and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"gene_count":0,"genotype_count":0,"name":"obsolete anion exchanger adaptor activity (obsolete GO:0017107)","termid":"GO:0017107"}


id: PBO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_cell","termid":"PBO:0030018"}


id: PATO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color saturation which is of low purity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color saturation","termid":"PATO:0000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low saturation","synonyms":[{"name":"dull","type":"related"},{"name":"pale","type":"exact"}],"termid":"PATO:0000328"}


id: GO:1900957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900956"},{"relation_name":"is_a","term_name":"negative regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900960"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900957"}


id: PBO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 3","termid":"PBO:0046055"}


id: PBO:0066643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 1","termid":"PBO:0066643"}


id: PBO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel syndrome","termid":"PBO:0011102"}


id: PBO:0041272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 4","termid":"PBO:0041272"}


id: PBO:0071146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 10","termid":"PBO:0071146"}


id: PBO:0071357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 16","termid":"PBO:0071357"}


id: PBO:0053217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 14","termid":"PBO:0053217"}


id: GO:0033240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"positively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine metabolic process","synonyms":[{"name":"positive regulation of amine metabolism","type":"exact"},{"name":"positive regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033240"}


id: MONDO:0018501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare stomach carcinoma.","gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of stomach (obsolete MONDO:0018501)","secondary_identifiers":["Orphanet:423771"],"synonyms":[{"name":"rare gastric carcinoma","type":"exact"},{"name":"rare stomach carcinoma","type":"exact"}],"termid":"MONDO:0018501","xrefs":{"Monarch":{"xref_id":"0018501"}}}


id: MONDO:0012080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the HSPB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 2","termid":"MONDO:0015352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 2B","secondary_identifiers":["MESH:C567084","MEDGEN:382017","UMLS:C2608087","OMIM:608634","DOID:0111207","GARD:18263"],"synonyms":[{"name":"HMN 2B","type":"related"},{"name":"HMN2B","type":"related"},{"name":"HSPB1 neuronopathy, distal hereditary motor","type":"exact"},{"name":"neuronopathy, distal hereditary motor caused by mutation in HSPB1","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type IIB","type":"related"},{"name":"neuropathy, distal hereditary motor, type 2B","type":"related"}],"termid":"MONDO:0012080","xrefs":{"Monarch":{"xref_id":"0012080"}}}


id: GO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"regulation of beta 2 integrin anabolism","type":"exact"},{"name":"regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"regulation of beta 2 integrin formation","type":"exact"},{"name":"regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045115"}


id: PBO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 135","termid":"PBO:0075085"}


id: PBO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 1","termid":"PBO:0051720"}


id: PBO:0073180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 2","termid":"PBO:0073180"}


id: PR:O74517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.11","synonyms":[{"name":"Spom972h-saf1","type":"exact"}],"termid":"PR:O74517"}


id: MONDO:1010003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, non-human animal","secondary_identifiers":["OMIA:000703"],"termid":"MONDO:1010003","xrefs":{"Monarch":{"xref_id":"1010003"}}}


id: PBO:0053951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1256","termid":"PBO:0053951"}


id: GO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of the initiation of T cell receptor signaling.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of initiation of T cell receptor signaling (obsolete GO:0023011)","synonyms":[{"name":"positive regulation of initiation of T cell receptor signaling","type":"exact"},{"name":"positive regulation of initiation of T cell receptor signalling","type":"exact"}],"termid":"GO:0023011"}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: GO:0098566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"transport vesicle lumen","termid":"GO:0098566"}


id: MONDO:0007115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angioma serpiginosum","termid":"MONDO:0019803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum, autosomal dominant","secondary_identifiers":["MESH:C536365","MEDGEN:370186","OMIM:106050","UMLS:C1970130","GARD:10189"],"synonyms":[{"name":"angioma serpiginosum, autosomal dominant","type":"exact"},{"name":"autosomal dominant angioma serpiginosum","type":"related"}],"termid":"MONDO:0007115","xrefs":{"Monarch":{"xref_id":"0007115"}}}


id: GO:0051094
data:
  {"annotated_genes":["SJAG_03581","SJAG_02392","SJAG_01212","SJAG_02379","SJAG_02169","SJAG_04509","SJAG_03453","SJAG_00514","SJAG_04853","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94066,89328,95341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[101816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[110947,89332,90313,87344,92951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[108448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"positively_regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01212":null,"SJAG_01794":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04509":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of developmental process","type":"narrow"},{"name":"stimulation of developmental process","type":"narrow"},{"name":"up regulation of developmental process","type":"exact"},{"name":"up-regulation of developmental process","type":"exact"},{"name":"upregulation of developmental process","type":"exact"}],"termid":"GO:0051094","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:0090141":null,"GO:1902917":null,"GO:1903024":null}}


id: PBO:0027411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_thioredoxin_peroxidase_activity","termid":"PBO:0027411"}


id: GO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: TNP dihydride Meisenheimer complex (aci form) = TNP dihydride Meisenheimer complex (nitro form).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydride TNP tautomerase activity (obsolete GO:0034799)","termid":"GO:0034799"}


id: PBO:0089618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1","termid":"PBO:0089618"}


id: MONDO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long-lasting, unexplained and asymptomatic blood hypereosinophilia.","definition_xrefs":["PMID:24338273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hypereosinophilia of undetermined significance","secondary_identifiers":["MEDGEN:1812275","UMLS:C5666804"],"synonyms":[{"name":"HEUS","type":"exact"},{"name":"benign eosinophilia","type":"exact"}],"termid":"MONDO:0100059","xrefs":{"Monarch":{"xref_id":"0100059"}}}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: MONDO:0014347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 3","secondary_identifiers":["OMIM:615789","UMLS:C4014339","MEDGEN:862776"],"synonyms":[{"name":"short stature with microcephaly and distinctive facies","type":"exact"}],"termid":"MONDO:0014347","xrefs":{"Monarch":{"xref_id":"0014347"}}}


id: PBO:0071587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 4","termid":"PBO:0071587"}


id: GO:0032005
data:
  {"annotated_genes":["SJAG_01978","SJAG_00990","SJAG_03623","SJAG_01718","SJAG_03340","SJAG_02379","SJAG_00781","SJAG_03453","SJAG_00993","SJAG_02923","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90318,105932,110948,115192],"is_not":false,"summary":null,"term":"GO:0032005"},{"annotations":[92797],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[92798,105829,88696,65812,95881,96549],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[72464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"The series of molecular signals that bring about the relay, amplification or dampening of a signal generated in response to a cue, such as starvation or pheromone exposure, in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02379":null,"SJAG_02923":null,"SJAG_03340":null,"SJAG_03453":null,"SJAG_03623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032005","terms_by_termid":{"GO:0000750":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null}}


id: PBO:0065374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 2","termid":"PBO:0065374"}


id: PBO:0073438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFI1 centrin binding protein","termid":"PBO:0073438"}


id: MONDO:0100221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 2","secondary_identifiers":["GARD:16402","MEDGEN:1763502","OMIM:619016","UMLS:C5436607"],"synonyms":[{"name":"IFAP SYNDROME 2","type":"exact"},{"name":"IFAP2","type":"exact"},{"name":"ichthyosis , follicular, with atrichia and photophobia syndrome 2","type":"exact"},{"name":"ichthyosis follicularis, atrichia, and photophobia syndrome 2","type":"exact"}],"termid":"MONDO:0100221","xrefs":{"Monarch":{"xref_id":"0100221"}}}


id: PBO:0081898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 849, pseudogene","termid":"PBO:0081898"}


id: PR:Q9Y7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps001 gene.","definition_xrefs":["UniProtKB:Q9Y7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.06","synonyms":[{"name":"Spom972h-rps001","type":"exact"}],"termid":"PR:Q9Y7L8"}


id: GO:0000987
data:
  {"annotated_genes":["SJAG_02311","SJAG_03241","SJAG_03911","SJAG_00664","SJAG_04388","SJAG_00386","SJAG_03879","SJAG_02149","SJAG_00926","SJAG_02048","SJAG_06599","SJAG_01243","SJAG_04092","SJAG_03918","SJAG_02406","SJAG_04009","SJAG_05339","SJAG_04855","SJAG_03388","SJAG_01725","SJAG_01916","SJAG_04813","SJAG_01441","SJAG_02472","SJAG_00124","SJAG_02956","SJAG_00037","SJAG_02709","SJAG_02138","SJAG_00802","SJAG_00210","SJAG_04191","SJAG_04839","SJAG_02252","SJAG_03484","SJAG_02052","SJAG_01343","SJAG_00693","SJAG_01740","SJAG_05006","SJAG_05288","SJAG_02810","SJAG_03473","SJAG_01694","SJAG_00163","SJAG_03183","SJAG_02730","SJAG_05343","SJAG_00987","SJAG_02569","SJAG_00266","SJAG_03519","SJAG_01930","SJAG_05153","SJAG_04421","SJAG_05337","SJAG_03346","SJAG_04381","SJAG_04749","SJAG_03622","SJAG_01307","SJAG_04036","SJAG_03538","SJAG_03120","SJAG_00861","SJAG_00792","SJAG_01583","SJAG_01062","SJAG_05247","SJAG_06576","SJAG_02938","SJAG_02218","SJAG_00421","SJAG_02326","SJAG_00979","SJAG_04712","SJAG_00304","SJAG_01157","SJAG_03354","SJAG_04249","SJAG_03735","SJAG_03143","SJAG_04584","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76589,76167,95540,74437,79824,97046,96434,111469,81339,74739,82244,81664,77691,87914,81703,80110,75316,107135,97045,97043,108763,117983,79377,95188,73815,87483,96876,97042,75863,101574,88931,87858,77479,96086,88250,73638,102227,110481,108201,75790,111510,105666,88503,114433,99645,110445,91942,116076,91394,76813,73782,99015,113280,76807,81373,65378,75562,100021,103487,103991,110465,77503,103087,78066,81443,110644,92777,89562,106284,71803,74273,94236,116215,96564,101017,101810,97927,97044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[108381,106609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[87641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[71560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[71561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[95079,79342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site, located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by some RNA polymerase. 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id: PBO:0076584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D8 antisense RNA 1","termid":"PBO:0076584"}


id: PBO:0074760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 119","termid":"PBO:0074760"}


id: PBO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX59 antisense RNA 1","termid":"PBO:0044777"}


id: GO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting the signal across the membrane by activating an associated G-protein. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor activity","secondary_identifiers":["GO:0001585","Wikipedia:5-HT_receptor","GO:0016609"],"synonyms":[{"name":"5-HT receptor","type":"exact"},{"name":"5-hydroxytryptamine receptor","type":"exact"},{"name":"G protein coupled serotonin receptor activity","type":"exact"},{"name":"G-protein coupled serotonin receptor activity","type":"exact"}],"termid":"GO:0004993"}


id: MONDO:0006573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired disorder characterized by abnormal loss or redistribution of the adipose tissue in the body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"lipodystrophy","secondary_identifiers":["NANDO:1200858","NANDO:2100147","NCIT:C97093","EFO:1000727","DOID:811","SCTID:71325002","Wikipedia:Lipodystrophy","NANDO:2200404","UMLS:C0023787","ICD9:272.6","MEDGEN:6111","HP:0009125","MESH:D008060"],"synonyms":[{"name":"lipodsystrophic syndrome","type":"exact"},{"name":"lipodsystrophic syndromes","type":"exact"},{"name":"lipodystrophy","type":"exact"},{"name":"lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0006573","xrefs":{"Monarch":{"xref_id":"0006573"}}}


id: PBO:0059216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro","termid":"PBO:0059216"}


id: PBO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein, predicted methyltransferase","termid":"PBO:0011465"}


id: PBO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-pass membrane and CBS domain protein, implicated in magnesium homeostasis and endomembrane organization","termid":"PBO:0090521"}


id: PBO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChAPs family protein Cfp1","termid":"PBO:0031908"}


id: PR:Q9UTL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog1 gene.","definition_xrefs":["UniProtKB:Q9UTL1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.15c","synonyms":[{"name":"COG complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog1","type":"exact"}],"termid":"PR:Q9UTL1"}


id: GO:0060350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone.","definition_xrefs":["GOC:dph","PMID:11680679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral bone morphogenesis","termid":"GO:0060350"}


id: PBO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor 2","termid":"PBO:0043056"}


id: MONDO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin lymphoma or even more rarely, a Hodgkin lymphoma that arises from the bone, without lymph node or other extranodal involvement. The femur, spine, and pelvic bones are the most commonly affected sites. The majority of patients present with bone pain in the affected area. A single bone or multiple skeletal sites may be involved. The prognosis is related to the cell type and the stage of the disease.","definition_xrefs":["NCIT:C6620"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"primary bone lymphoma","secondary_identifiers":["UMLS:C1332582","GARD:21385","MEDGEN:231451","Orphanet:314684","DOID:6759","SCTID:766935007"],"synonyms":[{"name":"bone lymphoma","type":"related"},{"name":"bone tissue lymphoma","type":"exact"},{"name":"lymphoma of bone","type":"exact"},{"name":"lymphoma of bone tissue","type":"exact"},{"name":"lymphoma of the bone","type":"exact"},{"name":"primary lymphoma of bone","type":"exact"},{"name":"primary lymphoma of the bone","type":"exact"}],"termid":"MONDO:0017814","xrefs":{"Monarch":{"xref_id":"0017814"}}}


id: PBO:0055194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2619","termid":"PBO:0055194"}


id: PBO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 5","termid":"PBO:0052704"}


id: PBO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(6)(p23)","termid":"PBO:0047887"}


id: PBO:0064421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepronociceptin","termid":"PBO:0064421"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: GO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in establishment of planar polarity","synonyms":[{"name":"protein localisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090251"}


id: MONDO:0400002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The ingestion of excessive calcium supplementation or calcium containing antacids, and alkali resulting in a triad of hypercalcemia, metabolic alkalosis, and renal insufficiency.","definition_xrefs":["PMID:24288027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calcium-alkali syndrome","secondary_identifiers":["UMLS:C0026141","MEDGEN:6403"],"synonyms":[{"name":"milk-alkali syndrome","type":"exact"}],"termid":"MONDO:0400002","xrefs":{"Monarch":{"xref_id":"0400002"}}}


id: MONDO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva in a newborn due to chemical or infectious causes. Aseptic conjunctivitis is often related to the use of prophylactic medications for infectious conjunctivitis. Septic conjunctivitis is related to perinatal exposure to microorganisms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal conjunctivitis","termid":"MONDO:0015455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ophthalmia neonatorum","secondary_identifiers":["DOID:9699","MESH:D009878","ICD9:771.6","MEDGEN:14489","NCIT:C116815","SCTID:34298002","UMLS:C0029076"],"synonyms":[{"name":"gonococcal conjunctivitis (neonatorum)","type":"exact"},{"name":"gonococcal ophthalmia neonatorum","type":"related"},{"name":"neonatal conjunctivitis","type":"exact"}],"termid":"MONDO:0004854","xrefs":{"Monarch":{"xref_id":"0004854"}}}


id: PBO:0059585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 2","termid":"PBO:0059585"}


id: PBO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 1","termid":"PBO:0044595"}


id: PBO:0049394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 10","termid":"PBO:0049394"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink.","definition_xrefs":["PMID:22864417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem loading","termid":"GO:0110126"},{"relation_name":"is_a","term_name":"glucosinolate transport","termid":"GO:1901349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phloem glucosinolate loading","termid":"GO:0090449"}


id: MONDO:0010895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disease that is characterized by albinism, black lock, cell migration disorder of the neurocytes of the gut and sensorineural deafness and has material basis in a mutation in the endothelin B receptor gene (EDNRB).","definition_xrefs":["OMIM:600501","DOID:0050600"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"ABCD syndrome","secondary_identifiers":["MEDGEN:333014","UMLS:C1838099","Orphanet:918","MESH:C535334"],"synonyms":[{"name":"ABCD syndrome","type":"exact"},{"name":"ABCDS","type":"related"},{"name":"albinism, black lock, cell migration disorder of the Neurocytes of the gut, and deafness","type":"related"},{"name":"albinism, block lock, cell migration disorder of the neurocytes of the gut, and deafness","type":"exact"}],"termid":"MONDO:0010895","xrefs":{"Monarch":{"xref_id":"0010895"}}}


id: GO:0075301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a relatively unspecialized cell acquires specialized features of a specific cell type occurring during spore germination, the physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell differentiation involved in spore germination (obsolete GO:0075301)","termid":"GO:0075301"}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: PBO:0028836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028836"}


id: PBO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 antisense RNA 1","termid":"PBO:0048688"}


id: GO:0006130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphofructokinase reduction (obsolete GO:0006130)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"}],"termid":"GO:0006130"}


id: MONDO:0009241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fountain syndrome is an extremely rare multi-systemic genetic disorder characterized by intellectual disability, deafness, skeletal abnormalities and coarse facial features.","definition_xrefs":["Orphanet:3219"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fountain syndrome","secondary_identifiers":["OMIM:229120","UMLS:C0795944","MEDGEN:208650","MESH:C537270","SCTID:720957007","GARD:64"],"synonyms":[{"name":"deafness, skeletal dysplasia, lip granuloma","type":"related"},{"name":"deafness-skeletal dysplasia-coarse face with full lips syndrome","type":"exact"},{"name":"deafness-skeletal dysplasia-lip granuloma syndrome","type":"exact"},{"name":"fountain syndrome","type":"exact"},{"name":"intellectual disability, deafness, skeletal abnormalities, coarse face with full lips","type":"related"},{"name":"intellectual disability, sensorineural deafness, skeletal abnormalities, and coarse face with full lips","type":"related"},{"name":"mental retardation, sensorineural deafness, skeletal abnormalities, and coarse face with full lips","type":"related"}],"termid":"MONDO:0009241","xrefs":{"Monarch":{"xref_id":"0009241"}}}


id: PR:Q9URY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URY4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase C869.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.01","synonyms":[{"name":"Spom972h-SPAC869.01","type":"exact"}],"termid":"PR:Q9URY4"}


id: PBO:0108592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75A","termid":"PBO:0108592"}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["MetaCyc:2.7.4.19-RXN","KEGG_REACTION:R04235"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: PBO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member K, pseudogene","termid":"PBO:0047983"}


id: FYPO:0000150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the morphology, i.e. the size, shape, or structure, of a colony growing on a solid surface is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"abnormal colony morphology","synonyms":[{"name":"colony shape: abnormal","type":"related"}],"termid":"FYPO:0000150"}


id: GO:0047229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxydocosanoate + UDP-D-glucose = 13-beta-D-glucosyloxydocosanoate + UDP.","definition_xrefs":["EC:2.4.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"13-hydroxydocosanoate 13-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:HYDROXYDOCOSANOATE-TRANS-RXN","RHEA:22316"],"synonyms":[{"name":"13-glucosyloxydocosanoate 2'-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-13-hydroxydocosanoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:13-hydroxydocosanoic acid glucosyltransferase activity","type":"related"},{"name":"UDPglucose:13-hydroxydocosanoate 13-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-hydroxydocosanoate glucosyltransferase activity","type":"related"}],"termid":"GO:0047229"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: PBO:0064314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 3","termid":"PBO:0064314"}


id: GO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by dynein that provides the energy for the movement of organelles (endosomes, lysosomes, mitochondria) along microtubules to the centrosome.","definition_xrefs":["EC:3.6.4.2"],"gene_count":0,"genotype_count":0,"name":"obsolete dynein ATPase activity (obsolete GO:0008567)","synonyms":[{"name":"dynein ATPase activity","type":"exact"}],"termid":"GO:0008567"}


id: MONDO:0016876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 11","secondary_identifiers":["MEDGEN:1826017","GARD:20799","UMLS:C5679659","Orphanet:261816"],"synonyms":[{"name":"partial deletion of chromosome type 11","type":"exact"},{"name":"partial monosomy of chromosome 11","type":"exact"}],"termid":"MONDO:0016876","xrefs":{"Monarch":{"xref_id":"0016876"}}}


id: PBO:0030390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030390"}


id: GO:1990075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane region adjacent to the base of eukaryotic cilia and flagella that is enriched in endocytosis-associated proteins and vesicles and that appears to regulate ciliary membrane homeostasis.","definition_xrefs":["GOC:cilia","PMID:22342749","GOC:krc","GOC:dr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"periciliary membrane compartment","synonyms":[{"name":"PCMC","type":"exact"}],"termid":"GO:1990075"}


id: PBO:0082548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall-related secretory glycoprotein; induced by nutrient deprivation-associated growth arrest and upon entry into stationary phase; may be involved in adaptation prior to stationary phase entry; protein demonstrates amyloid properties in vivo; YGP1 has a paralog, SPS100, that arose from the whole genome duplication","termid":"PBO:0082548"}


id: FYPO:0002529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm","synonyms":[{"name":"abnormal protein localisation to nucleoplasm","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002529"}


id: PBO:0087105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication","termid":"PBO:0087105"}


id: PBO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 5","termid":"PBO:0061274"}


id: GO:0016274
data:
  {"annotated_genes":["SJAG_00596","SJAG_02271","SJAG_03548","SJAG_02756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[82025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[99938,112255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"},{"annotations":[99939,112256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035241"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.","definition_xrefs":["PMID:31284549","GOC:mah","PMID:12351636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"arginine N-methyltransferase activity","termid":"GO:0016273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0016740","GO:0140096","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"protein-arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5205822","Reactome:R-HSA-5229203","Reactome:R-HSA-5205798","Reactome:R-HSA-191790","Reactome:R-HSA-5218952","Reactome:R-HSA-5229010","Reactome:R-HSA-5205867","Reactome:R-HSA-5205824","Reactome:R-HSA-5661126","Reactome:R-HSA-8934735","Reactome:R-HSA-8879123","Reactome:R-HSA-5205820"],"synonyms":[{"name":"PRMT activity","type":"exact"}],"termid":"GO:0016274","terms_by_termid":{"GO:0008469":null,"GO:0019702":null,"GO:0035241":null,"GO:0035242":null}}


id: GO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate biosynthetic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine pentaphosphate anabolism","type":"exact"},{"name":"guanosine pentaphosphate biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate formation","type":"exact"},{"name":"guanosine pentaphosphate synthesis","type":"exact"}],"termid":"GO:0015973"}


id: MONDO:0850160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by the presence of lymphoblasts that carry a translocation between the IL3 gene on chromosome 5 and the IGH locus on chromosome 14, (q31.1;q32.3).","definition_xrefs":["DOID:0080648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with IL3-IGH","termid":"MONDO:0850160","xrefs":{"Monarch":{"xref_id":"0850160"}}}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0002946","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: GO:0032111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive protein histidine kinase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of protein histidine kinase activity (obsolete GO:0032111)","synonyms":[{"name":"protein histidine kinase activator","type":"related"}],"termid":"GO:0032111"}


id: PBO:0024847
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin binding by Cdc13 and Mcm4 is mutually exclusive","termid":"PBO:0024847"}


id: _global:occurs_in
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"p occurs_in c if and only if all of the participants of p are part_of c.","definition_xrefs":["BFO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","secondary_identifiers":["BFO:0000066"],"synonyms":[{"name":"in","type":"related"}],"termid":"_global:occurs_in"}


id: SO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons AAT and AAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine","synonyms":[{"name":"Asn","type":"exact"},{"name":"N","type":"exact"}],"termid":"SO:0001449"}


id: PBO:0069268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 524, pseudogene","termid":"PBO:0069268"}


id: PBO:0119274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YOR152C","termid":"PBO:0119274"}


id: GO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-element, a class of Drosophila transposon responsible for hybrid dysgenesis.","definition_xrefs":["PMID:9440262","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"P-element binding","termid":"GO:0003693"}


id: GO:0052043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a host cellular component. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host cellular component (obsolete GO:0052043)","termid":"GO:0052043"}


id: GO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral release from host cell (obsolete GO:0044789)","termid":"GO:0044789"}


id: PBO:0048491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 3","termid":"PBO:0048491"}


id: PBO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 1","termid":"PBO:0043133"}


id: MONDO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoaldosteronism disease","secondary_identifiers":["NANDO:2100132","UMLS:C0857899","MESH:D006994","GARD:20228","MEDGEN:208996","Orphanet:181419","SCTID:60086000"],"synonyms":[{"name":"hypoaldosteronism","type":"related"},{"name":"rare hypoaldosteronism","type":"exact"}],"termid":"MONDO:0015900","xrefs":{"Monarch":{"xref_id":"0015900"}}}


id: GO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.","definition_xrefs":["PMID:7765833","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"beta-ketoadipate pathway","termid":"GO:0042952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, ortho-cleavage","secondary_identifiers":["MetaCyc:CATECHOL-ORTHO-CLEAVAGE-PWY"],"synonyms":[{"name":"catechol breakdown, ortho-cleavage","type":"exact"},{"name":"catechol degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019615"}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: MONDO:0008570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyrotoxic periodic paralysis in which the cause of the disease is a mutation in the CACNA1S gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 1","secondary_identifiers":["UMLS:C2749982","OMIM:188580","MEDGEN:413199"],"synonyms":[{"name":"CACNA1S thyrotoxic periodic paralysis","type":"exact"},{"name":"TTPP1","type":"related"},{"name":"thyrotoxic periodic paralysis caused by mutation in CACNA1S","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 1","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0008570","xrefs":{"Monarch":{"xref_id":"0008570"}}}


id: MOD:01135
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex-HexNAc","termid":"MOD:01135"}


id: PBO:0049812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC4 antisense RNA 1","termid":"PBO:0049812"}


id: GO:0070612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H2A)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H2A)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to the arginine residue at position 3 of histone H2A.","definition_xrefs":["GOC:mah","PMID:17898714","PMID:23451136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone H2A methyltransferase activity","termid":"GO:0140940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008276","GO:0016741","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H2AR3 methyltransferase activity","synonyms":[{"name":"histone H2AR3 arginine methyltransferase activity","type":"exact"},{"name":"histone methylase activity (H2A-R3 specific)","type":"exact"},{"name":"histone methyltransferase activity (H2A-R3 specific)","type":"exact"},{"name":"histone-H2AR3 methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity (H2A-R3 specific)","type":"exact"}],"termid":"GO:0070612"}


id: GO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensinogen metabolites in the kidney modulate the force with which blood passes through the renal circulatory system. The process begins when renin cleaves angiotensinogen.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by local renal renin-angiotensin","termid":"GO:0003086"}


id: PR:O13820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.04","synonyms":[{"name":"C-22 sterol desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg5","type":"exact"}],"termid":"PR:O13820"}


id: GO:0032341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"aldosterone metabolic process","synonyms":[{"name":"aldosterone metabolism","type":"exact"}],"termid":"GO:0032341"}


id: PR:000025001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from propeptide removal from M-factor precursor, farnesylated 1. In Schizosaccharomyces pombe 972h- the sequence is YTPKVPYMC, with a farnesylated C-terminal residue.","definition_xrefs":["PMID:1547790","PMID:8196631","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature M-factor","synonyms":[{"name":"PomBase_original_PRO_term_name: M-factor","type":"exact"},{"name":"mature M-factor","type":"exact"}],"termid":"PR:000025001"}


id: GO:0080155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of double fertilization forming a zygote and endosperm. Double fertilization forming a zygote and endosperm is a type of fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the two polar nuclei to form the 3n primary endosperm nucleus and then develops into the endosperm. The ploidy level of the 2n zygote and 3n primary endosperm nucleus is determined by the ploidy level of the parents involved. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:DHL","PMID:20478994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"regulates","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of double fertilization forming a zygote and endosperm","termid":"GO:0080155"}


id: GO:0072479
data:
  {"annotated_genes":["SJAG_00082","SJAG_01805","SJAG_01837","SJAG_04140","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110783,93283,101909,116283,89464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044811"],"synonyms":[{"name":"mitotic cell cycle spindle assembly checkpoint effector process","type":"exact"},{"name":"response to Dma1-dependent checkpoint signaling","type":"narrow"},{"name":"response to Dma1-dependent checkpoint signalling","type":"narrow"},{"name":"response to signal involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072479","terms_by_termid":{"GO:0140429":null}}


