# terms

id: PBO:0049935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP like 1","termid":"PBO:0049935"}


id: PBO:0056895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midnolin","termid":"PBO:0056895"}


id: GO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:15046878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite guidance","synonyms":[{"name":"dendritic guidance","type":"exact"}],"termid":"GO:0070983"}


id: GO:0035126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic genitalia morphogenesis","synonyms":[{"name":"post-embryonic genital morphogenesis","type":"related"}],"termid":"GO:0035126"}


id: MONDO:1012448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mammary neoplasms, animal","termid":"MONDO:0025483"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mammary tumor, dog","secondary_identifiers":["OMIA:001777-9615"],"termid":"MONDO:1012448","xrefs":{"Monarch":{"xref_id":"1012448"}}}


id: GO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid","termid":"GO:0071396"}


id: MOD:01596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01596"}


id: PBO:0090698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3","termid":"PBO:0090698"}


id: PR:P78968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pzh1 gene.","definition_xrefs":["UniProtKB:P78968","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP-Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.08","synonyms":[{"name":"Spom972h-pzh1","type":"exact"}],"termid":"PR:P78968"}


id: MONDO:0003995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of embryonal rhabdomyosarcoma occurring in female children. The neoplasm arises from the vulva. It is characterized by the formation of a cambium layer in the affected tissue and polypoid nodules with an abundant myxoid stroma.","definition_xrefs":["NCIT:C36098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood botryoid rhabdomyosarcoma","termid":"MONDO:0003992"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar childhood botryoid-type embryonal rhabdomyosarcoma","secondary_identifiers":["UMLS:C1332946","DOID:6789","MEDGEN:232056"],"synonyms":[{"name":"childhood botryoid rhabdomyosarcoma of mammalian vulva","type":"exact"},{"name":"childhood botryoid-type embryonal rhabdomyosarcoma of the vulva","type":"exact"},{"name":"childhood sarcoma Botryoides of the vulva","type":"exact"},{"name":"mammalian vulva childhood botryoid rhabdomyosarcoma","type":"exact"},{"name":"vulvar childhood botryoid-type embryonal rhabdomyosarcoma","type":"exact"}],"termid":"MONDO:0003995","xrefs":{"Monarch":{"xref_id":"0003995"}}}


id: PBO:0066626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPTOR independent companion of MTOR complex 2","termid":"PBO:0066626"}


id: PBO:0056879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 divergent transcript","termid":"PBO:0056879"}


id: GO:0098766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis I.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis I M phase (obsolete GO:0098766)","termid":"GO:0098766"}


id: GO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + NADP+ = coniferyl aldehyde + NADPH.","definition_xrefs":["RHEA:22444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"coniferyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-2602","EC:1.1.1.194"],"synonyms":[{"name":"coniferyl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050268"}


id: PBO:0091189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 8","termid":"PBO:0091189"}


id: PBO:0054985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2399","termid":"PBO:0054985"}


id: GO:0047373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(4-acetoxybut-1-ynyl)-2,2'-bithiophene + H2O = 5-(4-hydroxy-but-1-ynyl)-2,2'-bithiophene + acetate + H+.","definition_xrefs":["RHEA:11548","EC:3.1.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0019213","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acetoxybutynylbithiophene deacetylase activity","secondary_identifiers":["MetaCyc:3.1.1.54-RXN","KEGG_REACTION:R04490"],"synonyms":[{"name":"5-(4-acetoxy-1-butynyl)-2,2'-bithiophene:acetate esterase activity","type":"related"},{"name":"5-(4-acetoxybut-1-ynyl)-2,2'-bithiophene O-acetylhydrolase activity","type":"related"},{"name":"acetoxybutynylbithiophene esterase activity","type":"related"}],"termid":"GO:0047373"}


id: PBO:0053683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 870","termid":"PBO:0053683"}


id: internal:exact
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exact","termid":"internal:exact"}


id: MONDO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogenous group of disorders characterized by alterations of mitochondrial metabolism that result in muscle and nervous system dysfunction. These are often multisystemic and vary considerably in age at onset (usually in the first or second decade of life), distribution of affected muscles, severity, and course. (From Adams et al., Principles of Neurology, 6th ed, pp984-5)","definition_xrefs":["MESH:D017237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial encephalomyopathy","secondary_identifiers":["DOID:890","SCTID:447292006","UMLS:C0162666","ICD9:277.87","MEDGEN:57960"],"termid":"MONDO:0004675","xrefs":{"Monarch":{"xref_id":"0004675"}}}


id: MONDO:0011713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atypical multiple mole melanoma syndrome","termid":"MONDO:0018453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma-pancreatic cancer syndrome","secondary_identifiers":["MESH:C563985","GARD:18473","NCIT:C176904","OMIM:606719","UMLS:C1838547","MEDGEN:325450"],"synonyms":[{"name":"familial atypical multiple Mole melanoma-pancreatic carcinoma syndrome","type":"related"},{"name":"melanoma-pancreatic cancer syndrome","type":"exact"}],"termid":"MONDO:0011713","xrefs":{"Monarch":{"xref_id":"0011713"}}}


id: GO:0033951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 1,4-beta-D-xylose residues from the reducing end of oligosaccharides.","definition_xrefs":["EC:3.2.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"oligosaccharide reducing-end xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.156-RXN"],"synonyms":[{"name":"Rex","type":"related"},{"name":"beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose reducing-end xylanase activity","type":"related"},{"name":"reducing end xylose-releasing exo-oligoxylanase activity","type":"related"}],"termid":"GO:0033951"}


id: GO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:19318610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"priming of cellular response to stress","synonyms":[{"name":"priming of response to stress","type":"broad"},{"name":"priming of stress response","type":"broad"}],"termid":"GO:0080136"}


id: GO:0031914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic plasticity","synonyms":[{"name":"down regulation of synaptic plasticity","type":"exact"},{"name":"down-regulation of synaptic plasticity","type":"exact"},{"name":"downregulation of synaptic plasticity","type":"exact"},{"name":"inhibition of synaptic plasticity","type":"narrow"}],"termid":"GO:0031914"}


id: PBO:0074421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 20","termid":"PBO:0074421"}


id: PBO:0055318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2746","termid":"PBO:0055318"}


id: MONDO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteogenesis imperfecta found in a single South African family.","definition_xrefs":["DOID:0110335","PMID:7241530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta type 1","termid":"MONDO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and wormian bones but without fractures","secondary_identifiers":["OMIM:166230","MEDGEN:331579","GARD:15100","MESH:C563487","UMLS:C1833748"],"synonyms":[{"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and WORMIAN bones, but without fractures","type":"related"}],"termid":"MONDO:0008149","xrefs":{"Monarch":{"xref_id":"0008149"}}}


id: PATO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: MONDO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mediastinum angiosarcoma","secondary_identifiers":["UMLS:C1334649","DOID:4525","MEDGEN:233676","NCIT:C6613"],"synonyms":[{"name":"angiosarcoma (disease) of mediastinum","type":"exact"},{"name":"angiosarcoma of mediastinum","type":"exact"},{"name":"angiosarcoma of the mediastinum","type":"exact"},{"name":"hemangiosarcoma of mediastinum","type":"exact"},{"name":"hemangiosarcoma of the mediastinum","type":"exact"},{"name":"mediastinal angiosarcoma","type":"exact"},{"name":"mediastinal hemangiosarcoma","type":"exact"},{"name":"mediastinum angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003034","xrefs":{"Monarch":{"xref_id":"0003034"}}}


id: GO:0031959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a mineralocorticoid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12606724","PMID:11027914","PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated corticosteroid signaling pathway","termid":"GO:0031958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nuclear receptor-mediated mineralocorticoid signaling pathway","synonyms":[{"name":"intracellular mineralocorticoid receptor signaling pathway","type":"exact"},{"name":"mineralocorticoid receptor signaling pathway","type":"broad"},{"name":"mineralocorticoid receptor signalling pathway","type":"broad"}],"termid":"GO:0031959"}


id: MONDO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"},{"relation_name":"is_a","term_name":"mycosis fungoides and variants","termid":"MONDO:0015821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"mycosis fungoides variant","secondary_identifiers":["MEDGEN:271222","NCIT:C39644","UMLS:C1513782"],"synonyms":[{"name":"mycosis fungoides variant","type":"exact"}],"termid":"MONDO:0045071","xrefs":{"Monarch":{"xref_id":"0045071"}}}


id: GO:1902022
data:
  {"annotated_genes":["SJAG_04637","SJAG_02029","SJAG_03400","SJAG_03256","SJAG_04725","SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[96859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[107462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[103363,102330,109599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of a L-lysine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-lysine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902022","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:0160256":null}}


id: PBO:0071949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 2","termid":"PBO:0071949"}


id: PBO:0110333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 3","termid":"PBO:0110333"}


id: PATO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000672 unit (obsolete PATO:0000672)","termid":"PATO:0000672"}


id: GO:0099642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde axonal protein transport","synonyms":[{"name":"retrograde axon cargo transport","type":"broad"}],"termid":"GO:0099642"}


id: PBO:0036088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity_during_nitrogen_starvation","termid":"PBO:0036088"}


id: MONDO:0100609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypophosphatasia in which the cause of the disease is an autosomal recessive loss-of-function in the ALPL gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609","xrefs":{"Monarch":{"xref_id":"0100609"}}}


id: GO:2001157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"negatively_regulates","term_name":"L-proline catabolic process to L-glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proline catabolic process to glutamate","synonyms":[{"name":"negative regulation of proline breakdown to glutamate","type":"exact"},{"name":"negative regulation of proline degradation to glutamate","type":"exact"},{"name":"negative regulation of proline oxidation","type":"related"}],"termid":"GO:2001157"}


id: PBO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 3","termid":"PBO:0071280"}


id: RO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a piece of evidence and an entity that plays a role in supporting that evidence.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_evidence_with_support_from","termid":"RO:0002614"}


id: PBO:0064613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 3","termid":"PBO:0064613"}


id: GO:1903378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"positively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"activation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"positive regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"upregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1903378"}


id: SO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that is segregating in one or more natural populations of a species.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allele","termid":"SO:0001023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_sequence_variant","synonyms":[{"name":"polymorphic sequence variant","type":"exact"}],"termid":"SO:0001025"}


id: GO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2B serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2B receptor binding","type":"exact"},{"name":"type 2B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031827"}


id: GO:0097625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have a pH above 7. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"low affinity basic amino acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097625"}


id: PBO:0065075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 divergent transcript","termid":"PBO:0065075"}


id: GO:0160254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tRNA queuosine(34) by salvaging available queuosine or precursors of queuosine (preQ0 or preQ1).","definition_xrefs":["PMID:28208705","MetaCyc:PWY-8106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA queuosine(34) biosynthetic process","termid":"GO:0008616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors","termid":"GO:0160254"}


id: GO:1990263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that occurs as a result of deprivation of nourishment.","definition_xrefs":["PMID:7501024","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete spore wall assembly MAPK cascade (obsolete GO:1990263)","synonyms":[{"name":"MAPK cascade in response to starvation","type":"exact"},{"name":"MAPK cascade involved in nutrient response signaling","type":"exact"}],"termid":"GO:1990263"}


id: SO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -60 and -45 relative to the TSS. Consensus sequence is MKSYGGCARCGSYSS. Tends to co-occur with DMv3 (SO:0001160). Tends to not occur with DPE motif (SO:0000015) or MTE (SO:0001162).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv2_motif","synonyms":[{"name":"DMv2","type":"exact"},{"name":"DMv2 motif","type":"exact"},{"name":"MKSYGGCARCGSYSS","type":"narrow"},{"name":"directional motif v2","type":"exact"},{"name":"promoter motif 8","type":"exact"}],"termid":"SO:0001161"}


id: GO:0043534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis.","definition_xrefs":["PMID:11166264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration","termid":"GO:0043534"}


id: GO:0170016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together an endosome and an ER membrane either via membrane lipid binding or by interacting with an endosome protein, to establish and facilitate organelle exchange.","definition_xrefs":["PMID:33124732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"endoplasmic reticulum-endosome tether activity","termid":"GO:0170016"}


id: PBO:0043565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 3 chain","termid":"PBO:0043565"}


id: PBO:0082877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPA1 uORF; Arginine attenuator peptide, regulates translation of the CPA1 mRNA","termid":"PBO:0082877"}


id: PBO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE and coiled-coil domain autophagy adaptor 1","termid":"PBO:0048151"}


id: GO:0090314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"}


id: PBO:0076722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichoplein keratin filament binding","termid":"PBO:0076722"}


id: PBO:0045407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 9","termid":"PBO:0045407"}


id: PBO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1 (predicted)","termid":"PBO:0003830"}


id: PR:Q9HDZ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0553 protein C589.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.05c","synonyms":[{"name":"Spom972h-SPAC589.05c","type":"exact"}],"termid":"PR:Q9HDZ9"}


id: GO:0036503
data:
  {"annotated_genes":["SJAG_01858","SJAG_02774","SJAG_00941","SJAG_03345","SJAG_04345","SJAG_01626","SJAG_04384","SJAG_00790","SJAG_00766","SJAG_01854","SJAG_01051","SJAG_05022","SJAG_02685","SJAG_02539","SJAG_01768","SJAG_00530","SJAG_03032","SJAG_04429","SJAG_00126","SJAG_03227","SJAG_00131","SJAG_00681","SJAG_02694","SJAG_01585","SJAG_07000","SJAG_00627","SJAG_04904","SJAG_03153","SJAG_00403","SJAG_01134","SJAG_04612","SJAG_02244","SJAG_04583","SJAG_03657","SJAG_05274","SJAG_00948","SJAG_01709","SJAG_01528","SJAG_03841","SJAG_01656","SJAG_00931"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72512,72574,72599,72769,73064,74244,75242,76117,76557,78138,80288,80406,80442,80483,80600,81349,87244,89011,90875,93043,94207,94479,97346,97728,100288,102455,104275,104361,107227,107669,107734,111564,115459,116199,116765],"is_not":false,"summary":null,"term":"GO:0036503"},{"annotations":[79314,79837],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[77382,80890],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[93020,95202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The protein catabolic pathway which targets endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. It begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein modifications necessary for correct substrate transfer (e.g. ubiquitination), transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["GOC:bf","PMID:20940304","GOC:PARL","PMID:21969857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00766":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01656":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02244":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ERAD pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated degradation pathway","type":"related"},{"name":"endoplasmic reticulum-associated degradation","type":"exact"},{"name":"endoplasmic reticulum-associated protein degradation pathway","type":"related"},{"name":"protein degradation by ERAD","type":"exact"}],"termid":"GO:0036503","terms_by_termid":{"GO:0030970":null,"GO:0036503":null,"GO:0097466":null,"GO:1904293":null}}


id: GO:0010614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy","termid":"GO:0010611"},{"relation_name":"is_a","term_name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"}


id: PBO:0084194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT2); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage","termid":"PBO:0084194"}


id: FYPO:0005436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished double-strand break repair","synonyms":[{"name":"abolished double-strand break repair during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair during vegetative growth","type":"exact"},{"name":"double-strand break repair abolished","type":"exact"}],"termid":"FYPO:0005436"}


id: GO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"p-xylene metabolic process","termid":"GO:0018951"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene catabolic process","synonyms":[{"name":"p-xylene breakdown","type":"exact"},{"name":"p-xylene catabolism","type":"exact"},{"name":"p-xylene degradation","type":"exact"},{"name":"para-xylene catabolic process","type":"exact"},{"name":"para-xylene catabolism","type":"exact"}],"termid":"GO:0042187"}


id: MONDO:0013236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"PALB2-related cancer predisposition","termid":"MONDO:0700272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 3","secondary_identifiers":["UMLS:C3150547","MEDGEN:461897","OMIM:613348"],"synonyms":[{"name":"PALB2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca3","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALB2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 3","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to pancreatic cancer 3","type":"related"}],"termid":"MONDO:0013236","xrefs":{"Monarch":{"xref_id":"0013236"}}}


id: MONDO:0012228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 8","secondary_identifiers":["OMIM:609257","UMLS:C1836505","MEDGEN:332223","MESH:C563760"],"synonyms":[{"name":"MYP8","type":"exact"},{"name":"myopia 8","type":"exact"}],"termid":"MONDO:0012228","xrefs":{"Monarch":{"xref_id":"0012228"}}}


id: PBO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase NADPH flavoprotein subunit (predicted)","termid":"PBO:0005531"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PR:O60140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.09 gene.","definition_xrefs":["UniProtKB:O60140","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.09","synonyms":[{"name":"Spom972h-SPBC18H10.09","type":"exact"}],"termid":"PR:O60140"}


id: MONDO:0019004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal pediatric tumor of the kidney which may also be seen rarely in adults. The peak incidence of Wilms tumor is between the second and fifth year of life. Microscopically, it is composed of a mixture of cellular elements (blastemal, stromal, and epithelial). The most common sites of metastasis include the regional lymph nodes, lungs, and liver.","definition_xrefs":["NCIT:C40407"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal tumor (obsolete MONDO:0015963)","termid":"MONDO:0015963"},{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"Wilms tumor","termid":"MONDO:0006058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney Wilms tumor","secondary_identifiers":["MedDRA:10029145","NANDO:2200043","SCTID:302849000","ICDO:8960/3","NORD:1855","DOID:2154","DOID:5176","ONCOTREE:WT","GARD:7892","Orphanet:654"],"synonyms":[{"name":"Wilms tumor","type":"broad"},{"name":"Wilms tumor of the kidney","type":"exact"},{"name":"Wilms tumour","type":"broad"},{"name":"Wilms tumour of the kidney","type":"exact"},{"name":"Wilms' Tumor","type":"exact"},{"name":"Wilms' tumor","type":"broad"},{"name":"Wilms' tumor of the kidney","type":"exact"},{"name":"Wilms' tumour","type":"broad"},{"name":"Wilms' tumour of the kidney","type":"exact"},{"name":"adult nephroblastoma","type":"narrow"},{"name":"adult renal Wilms' tumour","type":"narrow"},{"name":"childhood renal Wilms tumor","type":"narrow"},{"name":"childhood renal Wilms tumour","type":"narrow"},{"name":"childhood renal Wilms' cancer","type":"narrow"},{"name":"embryonal nephroma","type":"narrow"},{"name":"kidney Wilms tumor","type":"exact"},{"name":"nephroblastoma","type":"exact"},{"name":"nephroblastoma, malignant","type":"exact"},{"name":"nonanaplastic renal Wilm's tumor","type":"narrow"},{"name":"nonanaplastic renal Wilm's tumour","type":"narrow"},{"name":"renal Wilms tumor","type":"exact"},{"name":"renal Wilms tumour","type":"exact"},{"name":"renal Wilms' tumor","type":"exact"},{"name":"renal Wilms' tumour","type":"exact"},{"name":"renal embryonic tumor","type":"exact"},{"name":"renal embryonic tumour","type":"exact"}],"termid":"MONDO:0019004","xrefs":{"Monarch":{"xref_id":"0019004"}}}


id: GO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + ADP + H+ + oxaloacetate + phosphate = ATP + citrate + CoA.","definition_xrefs":["RHEA:21160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ATP citrate synthase activity","secondary_identifiers":["GO:0046913","EC:2.3.3.8","KEGG_REACTION:R00352","MetaCyc:ATP-CITRATE-PRO-S--LYASE-RXN","Reactome:R-HSA-75848"],"synonyms":[{"name":"ATP citrate (pro-S)-lyase activity","type":"related"},{"name":"ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"ATP-citrate (pro-S-)-lyase activity","type":"related"},{"name":"ATP-citric lyase activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"related"},{"name":"adenosine triphosphate citrate lyase activity","type":"related"},{"name":"citrate cleavage enzyme activity","type":"related"},{"name":"citrate-ATP lyase activity","type":"related"},{"name":"citric cleavage enzyme activity","type":"related"}],"termid":"GO:0003878"}


id: GO:0006304
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties.","definition_xrefs":["GOC:jl","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006304","terms_by_termid":{"GO:0045007":null}}


id: GO:0060471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of secretion by a cell that results in the release of intracellular molecules contained within a cortical granule by fusion of the vesicle with the plasma membrane of a cell. A cortical granule is a specialized secretory vesicle that is released during egg activation that changes the surface of the egg to prevent polyspermy.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"prevention of polyspermy","termid":"GO:0060468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"cortical granule exocytosis","synonyms":[{"name":"cortical granule release","type":"related"},{"name":"cortical reaction","type":"related"}],"termid":"GO:0060471"}


id: GO:0035046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the male and female pronuclei towards each other prior to their fusion.","definition_xrefs":["PMID:9199363","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pronuclear migration","termid":"GO:0035046"}


id: FYPO:0002986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to ionizing radiation. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to ionizing radiation","synonyms":[{"name":"increased chromatin binding during cellular response to IR","type":"exact"}],"termid":"FYPO:0002986"}


id: PBO:0064465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 2, accessory subunit pseudogene 1","termid":"PBO:0064465"}


id: GO:0030254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the bacterial type III secretion system; secretion occurs in a continuous process without the distinct presence of periplasmic intermediates and does not involve proteolytic processing of secreted proteins.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein secretion by the type III secretion system","synonyms":[{"name":"protein secretion by the T3S","type":"exact"},{"name":"protein secretion by the T3SS","type":"exact"},{"name":"protein secretion by the TTSS","type":"exact"},{"name":"protein secretion by the type III protein secretion system","type":"exact"},{"name":"type III protein secretion system","type":"exact"}],"termid":"GO:0030254"}


id: PBO:0071030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 32","termid":"PBO:0071030"}


id: PBO:0091881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class I glutamine amidotransferase family protein","termid":"PBO:0091881"}


id: FYPO:0007404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during mitosis","termid":"FYPO:0004198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein degradation during mitotic anaphase","synonyms":[{"name":"decreased protein breakdown during mitotic anaphase","type":"exact"},{"name":"decreased protein catabolic process during mitotic anaphase","type":"exact"},{"name":"decreased protein catabolism during mitotic anaphase","type":"exact"},{"name":"decreased protein degradation during anaphase of mitosis","type":"exact"},{"name":"decreased protein degradation during mitotic anaphase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007404"}


id: MONDO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular dystrophy (obsolete MONDO:0004912)","termid":"MONDO:0004912","xrefs":{"Monarch":{"xref_id":"0004912"}}}


id: MONDO:0014592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the TUBGCP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005328"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 3","secondary_identifiers":["GARD:18482","MEDGEN:902924","OMIM:616335","UMLS:C4225362","DOID:0080107"],"synonyms":[{"name":"MCCRP3","type":"related"},{"name":"TUBGCP4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in TUBGCP4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 3","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 3","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 3","type":"exact"}],"termid":"MONDO:0014592","xrefs":{"Monarch":{"xref_id":"0014592"}}}


id: PBO:0091551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane xenobiotic transmembrane transporter Mfs1","termid":"PBO:0091551"}


id: PBO:0005249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (predicted)","termid":"PBO:0005249"}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19332:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: GO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body as part of an immune response.","definition_xrefs":["PMID:7507411","GOC:add","ISBN:0781735149","PMID:14708592","PMID:8600538","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in immune response","synonyms":[{"name":"immune cell migration during immune response","type":"exact"},{"name":"immune cell trafficking during immune response","type":"exact"},{"name":"leucocyte migration during immune response","type":"exact"},{"name":"leucocyte trafficking during immune response","type":"exact"},{"name":"leukocyte trafficking during immune response","type":"exact"}],"termid":"GO:0002522"}


id: GO:1900674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of olefin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin biosynthetic process","synonyms":[{"name":"olefin anabolism","type":"exact"},{"name":"olefin biosynthesis","type":"exact"},{"name":"olefin formation","type":"exact"},{"name":"olefin synthesis","type":"exact"}],"termid":"GO:1900674"}


id: PATO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal orientation","synonyms":[{"name":"anterodorsally directed","type":"exact"}],"termid":"PATO:0002491"}


id: PBO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.20","termid":"PBO:0001800"}


id: SO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast. The nucleomorph is the nuclei of the plastic.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorphic_sequence","synonyms":[{"name":"nucleomorphic sequence","type":"exact"}],"termid":"SO:0000739"}


id: PBO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 20","termid":"PBO:0060583"}


id: MONDO:0015077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal/paraganglial tumor (obsolete MONDO:0015077)","termid":"MONDO:0015077","xrefs":{"Monarch":{"xref_id":"0015077"}}}


id: RO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is a plant, and the parasite is parasitic under natural conditions and is also photosynthetic to some degree. Hemiparasites may just obtain water and mineral nutrients from the host plant. Many obtain at least part of their organic nutrients from the host as well.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiparasite_of","termid":"RO:0002237"}


id: PBO:0012066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, involved in diphthamide biosynthesis (predicted)","termid":"PBO:0012066"}


id: MONDO:0006976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually malignant neuroendocrine tumor arizing from delta cells. This neoplasm produces large amounts of somatostatin, which may result in a syndrome characterized by diarrhea, steatorrhea, weight loss, and gastric hyposecretion. Sixty percent are found in the pancreas and 40% in the duodenum or jejunum. The peak incidence occurs between 40 and 60 years of age; women are affected more than men by 2:1.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"somatostatinoma","secondary_identifiers":["SCTID:253006001","EFO:1001187","MedDRA:10041329","ICD9:235.5","MEDGEN:52416","GARD:4900","icd11.foundation:219879696","NCIT:C3379","UMLS:C0037661","DOID:4430","ICDO:8156/1","MESH:D013005","Orphanet:97283"],"synonyms":[{"name":"Delta cell tumor","type":"exact"},{"name":"Delta cell tumour","type":"exact"},{"name":"Somatomedin-secreting carcinoid","type":"related"},{"name":"ampullary somatostatinoma","type":"related"},{"name":"carcinoid somatostatinoma","type":"related"},{"name":"malignant islet cell tumor","type":"related"},{"name":"malignant islet cell tumour","type":"related"},{"name":"somatostatin cell neoplasm","type":"exact"},{"name":"somatostatin cell tumor","type":"exact"},{"name":"somatostatin cell tumour","type":"exact"},{"name":"somatostatin producing tumor","type":"exact"},{"name":"somatostatin producing tumour","type":"exact"},{"name":"somatostatin-producing NET","type":"exact"},{"name":"somatostatin-producing neuroendocrine tumor","type":"exact"},{"name":"somatostatin-producing neuroendocrine tumour","type":"exact"},{"name":"somatostatin-producing tumor","type":"exact"},{"name":"somatostatin-producing tumour","type":"exact"},{"name":"somatostatin-secreting pancreatic neoplasm","type":"related"},{"name":"somatostatinoma","type":"exact"},{"name":"tumor of Delta cells","type":"exact"},{"name":"tumor of the Delta cells","type":"exact"},{"name":"tumour of Delta cells","type":"exact"},{"name":"tumour of the Delta cells","type":"exact"}],"termid":"MONDO:0006976","xrefs":{"Monarch":{"xref_id":"0006976"}}}


id: MONDO:0014519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic mountain sickness, susceptibility to","secondary_identifiers":["UMLS:C0274294","MEDGEN:545568","OMIM:616182"],"synonyms":[{"name":"Monge disease","type":"related"},{"name":"chronic mountain sickness, susceptibility to","type":"exact"}],"termid":"MONDO:0014519","xrefs":{"Monarch":{"xref_id":"0014519"}}}


id: GO:0038063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by collagen binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:15888913","GOC:bf","PMID:16626936","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"collagen-activated signaling pathway","termid":"GO:0038065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"collagen-activated tyrosine kinase receptor signaling pathway","synonyms":[{"name":"DDR signaling pathway","type":"narrow"},{"name":"collagen-activated RTK signaling pathway","type":"exact"},{"name":"collagen-activated tyrosine kinase receptor signalling pathway","type":"exact"},{"name":"discoidin domain receptor signaling pathway","type":"narrow"}],"termid":"GO:0038063"}


id: PBO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses per1","termid":"PBO:0005095"}


id: PBO:0088701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Mtr3","termid":"PBO:0088701"}


id: MONDO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal minoxidil syndrome is characterized by a group of symptoms that may be observed in a fetus or newborn when the mother has taken minoxidil during pregnancy. Minoxidil is used in the treatment of malignant renal hypertension and as a topical solution to induce scalp hair growth. Hypertrichosis that gradually diminishes during the first six postnatal months has been reported. Additional reported features include cardiac (congenital great vessel transposition and pulmonary valve stenosis), neurodevelopmental (caudal regression sequence), gastrointestinal, renal, and limb malformations. Conclusive studies are however not available.","definition_xrefs":["Orphanet:1918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal minoxidil syndrome","secondary_identifiers":["SCTID:254251003","GARD:2308","icd11.foundation:4930572","MEDGEN:96601","UMLS:C0432373","ICD9:760.79"],"synonyms":[{"name":"minoxidil antenatal exposure","type":"related"},{"name":"minoxidil antenatal infection","type":"exact"}],"termid":"MONDO:0016014","xrefs":{"Monarch":{"xref_id":"0016014"}}}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["MEDGEN:14344","NCIT:C116381","SCTID:128192007","ICD9:729.2","SCTID:84299009","MESH:D009443","DOID:1803","UMLS:C0027813"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: PBO:0048784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 14","termid":"PBO:0048784"}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 224 member A","termid":"PBO:0047217"}


id: PBO:0043634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit gamma 1","termid":"PBO:0043634"}


id: MONDO:0007718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hepatocellular adenoma","termid":"MONDO:0018902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic adenomas, familial","secondary_identifiers":["DOID:0111366","MEDGEN:374515","MESH:C564190","UMLS:C1840646","OMIM:142330"],"synonyms":[{"name":"hepatic adenoma, somatic","type":"exact"},{"name":"hepatic adenomas, familial","type":"exact"},{"name":"liver cell adenomas, familial","type":"related"}],"termid":"MONDO:0007718","xrefs":{"Monarch":{"xref_id":"0007718"}}}


id: GO:0141093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(D-ribitylamino)uracil + L-tyrosine + S-adenosyl-L-methionine = 2-iminoacetate + 5'-deoxyadenosine + 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + H+ + L-methionine.","definition_xrefs":["RHEA:55200","PMID:11948155","PMID:25781338","PMID:23072415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase activity","secondary_identifiers":["EC:2.5.1.147","MetaCyc:RXN-19229"],"termid":"GO:0141093"}


id: PBO:0082538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; member of Srp1p/Tip1p family of serine-alanine-rich proteins; expressed under anaerobic conditions and required for anaerobic growth; TIR3 has a paralog, TIR2, that arose from the whole genome duplication","termid":"PBO:0082538"}


id: PBO:0049764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 1","termid":"PBO:0049764"}


id: PBO:0045887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1 pseudogene 1","termid":"PBO:0045887"}


id: PBO:0035744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_spindle_pole_body_oscillation","termid":"PBO:0035744"}


id: PBO:0067782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 84","termid":"PBO:0067782"}


id: PBO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type V","termid":"PBO:0004295"}


id: SOFP:internal_synonym
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_synonym","termid":"SOFP:internal_synonym"}


id: PBO:0056469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 intronic transcript 1","termid":"PBO:0056469"}


id: MONDO:0956987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An EZB diffuse large B-cell lymphoma that expresses the double hit gene expression signature (DHITsig+) according to gene expression profiling. In addition to the features characteristic of EZB, these cases commonly, but do not always, harbour MYC translocations and DDX3X mutations.","definition_xrefs":["DOID:0081070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EZB diffuse large B-cell lymphoma","termid":"MONDO:0850469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"EZB-MYC+ diffuse large B-cell lymphoma","termid":"MONDO:0956987","xrefs":{"Monarch":{"xref_id":"0956987"}}}


id: PBO:0081604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 528","termid":"PBO:0081604"}


id: PBO:0084373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoyl ligase; involved in the modification of mitochondrial enzymes by the attachment of lipoic acid groups","termid":"PBO:0084373"}


id: PBO:0029485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_curved_vegetative_cell","termid":"PBO:0029485"}


id: MONDO:0017913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"pure or complex hereditary spastic paraplegia","secondary_identifiers":["UMLS:C5679885","GARD:21429","MEDGEN:1843255","Orphanet:320335"],"synonyms":[{"name":"Pure or complex familial spastic paraplegia","type":"exact"},{"name":"Pure or complicated familial spastic paraplegia","type":"exact"},{"name":"Pure or complicated hereditary spastic paraplegia","type":"exact"}],"termid":"MONDO:0017913","xrefs":{"Monarch":{"xref_id":"0017913"}}}


id: MONDO:0957786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xerosis and growth failure with immune and pulmonary dysfunction syndrome","secondary_identifiers":["MEDGEN:1848919","UMLS:C5882692","OMIM:620510"],"termid":"MONDO:0957786","xrefs":{"Monarch":{"xref_id":"0957786"}}}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: GO:0070637
data:
  {"annotated_genes":["SJAG_04693","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[112678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[71668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleoside metabolism","type":"exact"}],"termid":"GO:0070637","terms_by_termid":{"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: GO:0016206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a catechol + S-adenosyl-L-methionine = a guaiacol + H+ + S-adenosyl-L-homocysteine. Acts on catechols and on catecholamines such as adrenaline or noradrenaline.","definition_xrefs":["RHEA:17877","EC:2.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"catechol O-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-8955010","MetaCyc:CATECHOL-O-METHYLTRANSFERASE-RXN","Reactome:R-HSA-175983"],"synonyms":[{"name":"COMT I","type":"related"},{"name":"COMT II","type":"related"},{"name":"MB-COMT (membrane-bound form of catechol-O-methyltransferase)","type":"related"},{"name":"S-COMT (soluble form of catechol-O-methyltransferase)","type":"related"},{"name":"S-adenosyl-L-methionine:catechol O-methyltransferase activity","type":"related"},{"name":"catechol methyltransferase activity","type":"related"},{"name":"catecholamine O-methyltransferase activity","type":"related"}],"termid":"GO:0016206"}


id: MONDO:0035124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear hypopigmentation and craniofacial asymmetry with acral, ocular and brain anomalies","secondary_identifiers":["MEDGEN:1806249","Orphanet:589608","GARD:22358","UMLS:C5680313"],"termid":"MONDO:0035124","xrefs":{"Monarch":{"xref_id":"0035124"}}}


id: MONDO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent deficits in social interaction and communication and interaction as well as a markedly restricted repertoire of activity and interest as well as repetitive patterns of behavior.","definition_xrefs":["PMID:28879490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"autism","secondary_identifiers":["OMIM:209850","ICD9:299.0","MEDGEN:13966","DOID:12849","NCIT:C97161","HP:0000717","MESH:D001321","EFO:0003758","UMLS:C0004352"],"synonyms":[{"name":"Kanner's syndrome","type":"exact"},{"name":"autism","type":"exact"},{"name":"autism (disease)","type":"exact"},{"name":"autism spectrum disorder","type":"broad"},{"name":"autism, susceptiblity to","type":"narrow"},{"name":"autistic disorder","type":"related"},{"name":"autistic disorder of childhood onset","type":"exact"},{"name":"childhood autism","type":"exact"},{"name":"infantile autism","type":"exact"}],"termid":"MONDO:0005260","xrefs":{"Monarch":{"xref_id":"0005260"}}}


id: SO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"IsomiRs are all the bona fide variants of a mature product. IsomiRs should be connected to the ref_miRNA it is most likely to be the variant of. Some isomiRs can be variations of one or multiple ref_miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isomiR","termid":"SO:0002167"}


id: PBO:0018052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0018052"}


id: MONDO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal seminal vesiculitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal seminal vesiculitis","termid":"MONDO:0001027"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle acute gonorrhea","secondary_identifiers":["SCTID:65049003","DOID:0050004","UMLS:C0153194","MEDGEN:509196"],"synonyms":[{"name":"acute gonococcal seminal vesiculitis","type":"exact"},{"name":"gonococcal seminal vesiculitis, acute","type":"exact"}],"termid":"MONDO:0000222","xrefs":{"Monarch":{"xref_id":"0000222"}}}


id: MONDO:0014903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign familial infantile epilepsy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 5","secondary_identifiers":["GARD:16506","OMIM:617080","MEDGEN:934695","UMLS:C4310728","DOID:0081118"],"synonyms":[{"name":"BFIS5","type":"exact"},{"name":"SCN8A benign familial infantile epilepsy","type":"exact"},{"name":"benign familial infantile epilepsy caused by mutation in SCN8A","type":"exact"},{"name":"convulsions, benign familial infantile, 5","type":"related"},{"name":"seizures, benign familial infantile, 5","type":"exact"},{"name":"seizures, benign familial infantile, 5; BFIS5","type":"exact"},{"name":"seizures, benign familial infantile, type 5","type":"exact"}],"termid":"MONDO:0014903","xrefs":{"Monarch":{"xref_id":"0014903"}}}


id: MONDO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stenosis of lacrimal passage","secondary_identifiers":["DOID:13654","ICD9:375.53","SCTID:81345003","UMLS:C0155245","MEDGEN:509870"],"synonyms":[{"name":"stenosis of lacrimal canaliculi","type":"exact"}],"termid":"MONDO:0001768","xrefs":{"Monarch":{"xref_id":"0001768"}}}


id: MONDO:0005806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the hypopharynx.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"neoplasm of hypopharynx","termid":"MONDO:0021358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"hypopharynx cancer","secondary_identifiers":["ICD10CM:C13","EFO:0007321","ICD9:148.9","MESH:D007012","DOID:8533","UMLS:C0153398","SCTID:303012000","NCIT:C7190","MEDGEN:102266","ICD9:148","ICD9:148.3"],"synonyms":[{"name":"hypopharyngeal cancer","type":"exact"},{"name":"hypopharynx pharynx cancer","type":"exact"},{"name":"hypural pharynx cancer","type":"exact"},{"name":"malignant hypopharyngeal neoplasm","type":"exact"},{"name":"malignant hypopharyngeal tumor","type":"exact"},{"name":"malignant hypopharyngeal tumour","type":"exact"},{"name":"malignant neoplasm of hypopharynx","type":"exact"},{"name":"malignant neoplasm of ill-defined sites within the lip and oral cavity","type":"exact"},{"name":"malignant neoplasm of other specified hypopharyngeal site","type":"exact"},{"name":"malignant neoplasm of other specified sites of hypopharynx","type":"exact"},{"name":"malignant neoplasm of posterior hypopharyngeal wall","type":"exact"},{"name":"malignant neoplasm of posterior wall of hypopharynx","type":"exact"},{"name":"malignant neoplasm of the hypopharynx","type":"exact"},{"name":"malignant tumor of hypopharynx","type":"exact"},{"name":"malignant tumor of posterior wall of hypopharynx","type":"exact"},{"name":"malignant tumor of the hypopharynx","type":"exact"},{"name":"malignant tumour of hypopharynx","type":"exact"},{"name":"malignant tumour of posterior wall of hypopharynx","type":"exact"},{"name":"malignant tumour of the hypopharynx","type":"exact"},{"name":"pharynx cancer of hypopharynx","type":"exact"}],"termid":"MONDO:0005806","xrefs":{"Monarch":{"xref_id":"0005806"}}}


id: FYPO:0006165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched, has more than one nucleus, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"branched, swollen, elongated, multinucleate vegetative cell","synonyms":[{"name":"branched, elongated, swollen, multinucleate vegetative cell","type":"exact"},{"name":"branched, swollen, elongated, multinucleate cell during vegetative growth","type":"exact"},{"name":"branched, swollen, elongated, multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006165"}


id: GO:1902814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:TermGenie","PMID:10499580","GO_REF:0000058","GOC:mr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902814)","synonyms":[{"name":"activation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"activation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"positive regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"positive regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"up-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"upregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902814"}


id: MOD:00300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl-5-poly(ADP-ribose).","definition_xrefs":["PubMed:15842200","RESID:AA0295","Unimod:213#E","DeltaMass:0","PubMed:11246023","PubMed:8533153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl-5-poly(ADP-ribose)","synonyms":[{"name":"(S)-2-amino-5-poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl]oxy-5-oxopentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"L-glutamyl-5-poly(ADP-ribose)","type":"exact"},{"name":"L-isoglutamyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES PolyADP-ribosyl glutamic acid","type":"exact"},{"name":"O-ADP-ribosylation (on Glutamate or C terminus)","type":"exact"}],"termid":"MOD:00300"}


id: GO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neutrophil, any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.","definition_xrefs":["GOC:add","PMID:12960266","GOC:mtg_apoptosis","PMID:12752675","CL:0000775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil apoptotic process","synonyms":[{"name":"apoptosis of neutrophils","type":"exact"},{"name":"neutrophil apoptosis","type":"narrow"},{"name":"neutrophil programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neutrophils by apoptosis","type":"exact"},{"name":"programmed cell death, neutrophils","type":"exact"}],"termid":"GO:0001781"}


id: PBO:0081100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 1","termid":"PBO:0081100"}


id: MONDO:0035354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete IgG4-related systemic disease (obsolete MONDO:0035354)","termid":"MONDO:0035354","xrefs":{"Monarch":{"xref_id":"0035354"}}}


id: FYPO:0005772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at tRNA genes. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at tRNA genes during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at transfer RNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005772"}


id: MONDO:0014756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the TENM4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 5","secondary_identifiers":["UMLS:C4225223","OMIM:616736","DOID:0111432","MEDGEN:897748"],"synonyms":[{"name":"ETM5","type":"exact"},{"name":"TENM4 essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in TENM4","type":"exact"},{"name":"essential tremor, hereditary, 5","type":"exact"},{"name":"tremor, hereditary essential, 5","type":"exact"},{"name":"tremor, hereditary essential, 5; ETM5","type":"exact"},{"name":"tremor, hereditary essential, type 5","type":"exact"}],"termid":"MONDO:0014756","xrefs":{"Monarch":{"xref_id":"0014756"}}}


id: PBO:0012243
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains FLEX elelment","termid":"PBO:0012243"}


id: PBO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3j (p35)","termid":"PBO:0000977"}


id: MONDO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, highly aggressive and lethal carcinoma that affects children and young adults. It arises from midline epithelial structures, most commonly the head, neck, and mediastinum. It is a poorly differentiated carcinoma and is characterized by mutations and rearrangement of the NUT gene. A balanced translocation t(15;19) is present that results in the creation of a fusion gene involving the NUT gene, most commonly BRD4-NUT fusion gene.","definition_xrefs":["NCIT:C45716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nut midline carcinoma","secondary_identifiers":["Wikipedia:NUT_midline_carcinoma","EFO:0005783","UMLS:C1707291","MEDGEN:312999","GARD:21852","Orphanet:443167","DOID:0060463","ONCOTREE:NMCHN"],"synonyms":[{"name":"Midline carcinoma of children and Young adults with NUT rearrangement","type":"exact"},{"name":"NMC","type":"exact"},{"name":"NUT Midline carcinoma","type":"exact"},{"name":"NUT carcinoma","type":"exact"},{"name":"NUT midline carcinoma of the head and neck","type":"related"},{"name":"carcinoma with t(15;19)(q13;p13.1) translocation","type":"exact"},{"name":"nuclear protein in testis midline carcinoma","type":"exact"}],"termid":"MONDO:0005563","xrefs":{"Monarch":{"xref_id":"0005563"}}}


id: GO:0006152
data:
  {"annotated_genes":["SJAG_02580","SJAG_01359","SJAG_00957","SJAG_02959","SJAG_04927"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77033,90544,111757],"is_not":false,"summary":null,"term":"GO:0006152"},{"annotations":[87036,87035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside breakdown","type":"exact"},{"name":"purine nucleoside catabolism","type":"exact"},{"name":"purine nucleoside degradation","type":"exact"}],"termid":"GO:0006152","terms_by_termid":{"GO:0006152":null,"GO:0006154":null}}


id: PBO:0067089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 125, pseudogene","termid":"PBO:0067089"}


id: PR:O13850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coq9 gene.","definition_xrefs":["UniProtKB:O13850","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein coq9, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.11","synonyms":[{"name":"Spom972h-coq9","type":"exact"}],"termid":"PR:O13850"}


id: MOD:00107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-tryptophan amide.","definition_xrefs":["PubMed:3947348","RESID:AA0098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan amide","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanamide","type":"exact"},{"name":"L-tryptophan amide","type":"exact"},{"name":"MOD_RES Tryptophan amide","type":"exact"},{"name":"TrpN","type":"exact"},{"name":"amidated L-tryptophan","type":"exact"},{"name":"tryptophanamide","type":"exact"}],"termid":"MOD:00107"}


id: GO:1905942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["PMID:19737525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"}


id: GO:0019516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the conversion of lactate to other compounds, such as pyruvate, with concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lactate oxidation (obsolete GO:0019516)","termid":"GO:0019516"}


id: PBO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related maculopathy susceptibility 2","termid":"PBO:0040038"}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.6-RXN","EC:6.3.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0016874","GO:0003674","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["RHEA:14513","Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: PBO:0086996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag","termid":"PBO:0086996"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: PBO:0016119
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus (mat1-Pc). The pombe sequence reference strain is h-, therefore annotations are attached to this gene and not mat1-Pc","termid":"PBO:0016119"}


id: PBO:0056599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midkine","termid":"PBO:0056599"}


id: PBO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadotropin releasing hormone 1","termid":"PBO:0048848"}


id: PBO:0056087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 96","termid":"PBO:0056087"}


id: PBO:0047019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A22","termid":"PBO:0047019"}


id: PBO:0078876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPS1 antisense RNA 1","termid":"PBO:0078876"}


id: MONDO:1011668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, non-human animal","secondary_identifiers":["OMIA:000789"],"termid":"MONDO:1011668","xrefs":{"Monarch":{"xref_id":"1011668"}}}


id: MONDO:1010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, non-human animal","termid":"MONDO:1010002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, horse","secondary_identifiers":["OMIA:000689-9796"],"termid":"MONDO:1010416","xrefs":{"Monarch":{"xref_id":"1010416"}}}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: MONDO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by viruses of the genus cardiovirus, family picornaviridae.","definition_xrefs":["MESH:D018188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Picornaviridae infectious disease","termid":"MONDO:0005914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiovirus infectious disease","secondary_identifiers":["EFO:0007194","MEDGEN:60193","UMLS:C0206617"],"synonyms":[{"name":"Cardiovirus infection","type":"related"},{"name":"infection, Cardiovirus","type":"related"},{"name":"infections, Cardiovirus","type":"related"}],"termid":"MONDO:0005691","xrefs":{"Monarch":{"xref_id":"0005691"}}}


id: PBO:0039932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 37","termid":"PBO:0039932"}


id: PBO:0061514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 4","termid":"PBO:0061514"}


id: MONDO:0010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypermetabolic syndrome caused by the elevation of thyroid hormone levels in the serum. Signs and symptoms include tachycardia, palpitations, tremor, weight loss, warm weather intolerance, and moist skin. Causes include Graves disease, toxic nodular goiter, toxic thyroid nodule, and lymphocytic thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Graves disease","termid":"MONDO:0005364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"thyrotoxicosis","secondary_identifiers":["MEDGEN:11814","ICD9:242","DOID:7997","NCIT:C61469","SCTID:90739004","icd11.foundation:1470387017","ICD9:242.90","EFO:0009190","MESH:D013971","UMLS:C0040156","ICD9:242.80"],"synonyms":[{"name":"GRD","type":"related"},{"name":"GRD1","type":"related"},{"name":"Graves disease, susceptibility to, 1","type":"related"},{"name":"hyperthyroidism, autoimmune","type":"related"}],"termid":"MONDO:0010138","xrefs":{"Monarch":{"xref_id":"0010138"}}}


id: GO:0120124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that primes vacuolar or vesicular membranes for fusion with other intracellular membranes, by promoting the dissociation of cis-SNARE complexes.","definition_xrefs":["GOC:lnp","PMID:9015301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"membrane fusion priming complex","synonyms":[{"name":"GATE-16 complex","type":"exact"},{"name":"LMA1 complex","type":"exact"}],"termid":"GO:0120124"}


id: PBO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1-SH3BGR readthrough","termid":"PBO:0048541"}


id: PBO:0073931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 4","termid":"PBO:0073931"}


id: GO:0035049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group to juvenile hormone acid.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone acid methyltransferase activity (obsolete GO:0035049)","termid":"GO:0035049"}


id: MONDO:0013881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening multiorgan disorder which develops in the first months of life, presenting with respiratory distress and proteinuria in the nephrotic range, and leading to severe interstitial lung disease and renal failure. Some patients additionally display cutaneous alterations, ranging from blistering and skin erosions to an epidermolysis bullosa-like phenotype, with toe nail dystrophy and sparse hair.","definition_xrefs":["Orphanet:306504"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disease of glomerular basement membrane (obsolete MONDO:0019723)","termid":"MONDO:0019723"},{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 7, with interstitial lung disease and nephrotic syndrome","secondary_identifiers":["GARD:17377","MEDGEN:1388385","UMLS:C4518785","OMIM:614748"],"synonyms":[{"name":"ILNEB","type":"related"},{"name":"JEB with respiratory and renal involvement","type":"exact"},{"name":"JEB-RR","type":"exact"},{"name":"congenital ILNEB syndrome","type":"exact"},{"name":"congenital NEP syndrome","type":"exact"},{"name":"congenital interstitial lung disease-nephrotic syndrome-epidermolysis bullosa syndrome","type":"exact"},{"name":"congenital nephrotic syndrome - interstitial lung disease - epidermolysis bullosa syndrome","type":"exact"},{"name":"congenital nephrotic syndrome-epidermolysis bullosa-pulmonary disease syndrome","type":"exact"},{"name":"interstitial lung disease, nephrotic syndrome, and epidermolysis bullosa, congenital","type":"related"},{"name":"junctional epidermolysis bullosa with respiratory and renal involvement","type":"related"}],"termid":"MONDO:0013881","xrefs":{"Monarch":{"xref_id":"0013881"}}}


id: GO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha11-beta1 integrin complex bound to a type I collagen.","definition_xrefs":["PMID:10464311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha11-beta1 integrin-collagen type I complex","synonyms":[{"name":"ITGA11-ITGB1-COL1A1 complex","type":"narrow"}],"termid":"GO:0071087"}


id: PBO:0048602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone secretagogue receptor","termid":"PBO:0048602"}


id: PBO:0087172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit","termid":"PBO:0087172"}


id: MONDO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a bile duct.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver carcinoma in situ","termid":"MONDO:0004715"},{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"bile duct carcinoma in situ","secondary_identifiers":["NCIT:C134609","DOID:0050613"],"synonyms":[{"name":"bile duct in situ carcinoma","type":"exact"},{"name":"carcinoma in situ of bile duct","type":"exact"},{"name":"stage 0 bile duct carcinoma","type":"exact"}],"termid":"MONDO:0000374","xrefs":{"Monarch":{"xref_id":"0000374"}}}


id: MONDO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 24, presynaptic","secondary_identifiers":["GARD:16309","MEDGEN:1648337","OMIM:618198","UMLS:C4748684"],"synonyms":[{"name":"CMS24","type":"related"},{"name":"MYASTHENIC SYNDROME, CONGENITAL, 24, PRESYNAPTIC","type":"related"}],"termid":"MONDO:0032597","xrefs":{"Monarch":{"xref_id":"0032597"}}}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32999","PMID:16612385","PMID:16458889","PMID:23246612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: GO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-dependent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-dependent","type":"exact"}],"termid":"GO:0002489"}


id: PBO:0063322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase","termid":"PBO:0063322"}


id: PR:Q9P7C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug109 gene.","definition_xrefs":["UniProtKB:Q9P7C2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 109 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.02c","synonyms":[{"name":"Spom972h-mug109","type":"exact"}],"termid":"PR:Q9P7C2"}


id: MONDO:1012582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited cone-rod dystrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582","xrefs":{"Monarch":{"xref_id":"1012582"}}}


id: GO:0032283
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An acetate CoA-transferase complex located in the stroma of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate CoA-transferase complex","termid":"GO:0009329"},{"relation_name":"part_of","term_name":"plastid acetyl-CoA carboxylase complex","termid":"GO:0032282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"plastid acetate CoA-transferase complex","termid":"GO:0032283"}


id: MONDO:0020369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chandler syndrome, the most frequent clinical variant of iridocorneal endothelial (ICE) syndrome, is characterized by very few iris abnormalities but more severe corneal edema and less severe secondary glaucoma than seen in the other two ICE syndrome variants: Cogan-Reese syndrome and essential iris atrophy.","definition_xrefs":["Orphanet:98979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Chandler syndrome","secondary_identifiers":["MEDGEN:107777","DOID:11554","icd11.foundation:806443940","MedDRA:10057487","NORD:918","SCTID:416960004","GARD:6033","UMLS:C0544008","ICD9:371.57"],"synonyms":[{"name":"Chandler's Syndrome","type":"exact"},{"name":"Chandler's syndrome","type":"exact"},{"name":"dystrophy of corneal endothelium","type":"exact"},{"name":"endothelial corneal dystrophy","type":"exact"},{"name":"posterior membrane corneal dystrophy","type":"exact"}],"termid":"MONDO:0020369","xrefs":{"Monarch":{"xref_id":"0020369"}}}


id: GO:0015848
data:
  {"annotated_genes":["SJAG_02060","SJAG_02059","SJAG_02125","SJAG_02344","SJAG_03817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62381,70466,62357,57969,70563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"}]},"cv_name":"biological_process","definition":"The directed movement of spermidine, N-(3-aminopropyl)-1,4-diaminobutane, a polyamine formed by the transfer of a propylamine group from decarboxylated S-adenosylmethionine to putrescine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"spermidine transport","references_by_uniquename":{"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015848","terms_by_termid":{"GO:1903711":null}}


id: MONDO:0032917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 76","secondary_identifiers":["OMIM:618787","MEDGEN:1710038","GARD:18154","UMLS:C5394080","DOID:0112167"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 76","type":"narrow"},{"name":"DFNA76","type":"narrow"},{"name":"deafness, autosomal dominant 76","type":"narrow"}],"termid":"MONDO:0032917","xrefs":{"Monarch":{"xref_id":"0032917"}}}


id: PR:Q92346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G9.01c gene.","definition_xrefs":["UniProtKB:Q92346","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.01c","synonyms":[{"name":"Spom972h-SPAC6G9.01c","type":"exact"}],"termid":"PR:Q92346"}


id: FYPO:0002655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal, and the vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"has_part","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"},{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"},{"relation_name":"is_a","term_name":"enlarged exocytic vesicles","termid":"FYPO:0002654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"enlarged exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of enlarged exocytic vesicles","type":"related"},{"name":"additional enlarged exocytic vesicles present","type":"exact"},{"name":"enlarged exocytic vesicles present in greater numbers","type":"exact"},{"name":"enlarged exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"enlarged exocytotic vesicles present in increased numbers","type":"exact"},{"name":"enlarged post-Golgi secretory vesicles present in increased numbers","type":"related"},{"name":"extra enlarged exocytic vesicles","type":"exact"}],"termid":"FYPO:0002655"}


id: GO:1990487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignin in the absence of oxygen. Lignin is a class of polymers of phenylpropanoid units.","definition_xrefs":["DOI:10.1039/C3EE40932E","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"anaerobic lignin catabolic process","synonyms":[{"name":"anaerobic lignin degradation","type":"exact"}],"termid":"GO:1990487"}


id: PBO:0055706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 1 like","termid":"PBO:0055706"}


id: PBO:0078106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 13","termid":"PBO:0078106"}


id: PBO:0059205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X12, pseudogene","termid":"PBO:0059205"}


id: PBO:0048554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--fructose-6-phosphate transaminase 1","termid":"PBO:0048554"}


id: GO:0035391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at silent mating-type loci.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at silent mating-type cassette (obsolete GO:0035391)","termid":"GO:0035391"}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PomBase:mah","PMID:15797925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000120","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: GO:0031634
data:
  {"annotated_genes":["SJAG_00247","SJAG_00073","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990943"},{"annotations":[114629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[101809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers, sites that inhibit the progress of replication forks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031634","terms_by_termid":{"GO:0043110":null,"GO:0110035":null,"GO:1990943":null}}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: PBO:0087742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087742"}


id: PBO:0041697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator 3","termid":"PBO:0041697"}


id: MOD:00691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of an 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}


id: PBO:0039121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1","termid":"PBO:0039121"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: GO:0006512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cyclical process by which one or more ubiquitin groups are added to (ubiquitination) and removed from (deubiquitination) a protein.","definition_xrefs":["PMID:11917093"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin cycle (obsolete GO:0006512)","synonyms":[{"name":"ubiquitin cycle","type":"exact"}],"termid":"GO:0006512"}


id: PATO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001182 relative response (obsolete PATO:0001182)","termid":"PATO:0001182"}


id: PBO:0030512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_reversine","termid":"PBO:0030512"}


id: MONDO:0850347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcomatoid transitional cell carcinoma that is located in the bladder.","definition_xrefs":["DOID:0080901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcomatoid transitional cell carcinoma","termid":"MONDO:0002837"},{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcomatoid transitional cell carcinoma","termid":"MONDO:0850347","xrefs":{"Monarch":{"xref_id":"0850347"}}}


id: MONDO:0014491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the BCL10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 37","secondary_identifiers":["DOID:0111939","OMIM:616098","MEDGEN:863632","UMLS:C4015195"],"synonyms":[{"name":"BCL10 primary immunodeficiency disease","type":"exact"},{"name":"IMD37","type":"related"},{"name":"combined immunodeficiency due to BCL10 deficiency","type":"exact"},{"name":"immunodeficiency 37","type":"exact"},{"name":"immunodeficiency type 37","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in BCL10","type":"exact"}],"termid":"MONDO:0014491","xrefs":{"Monarch":{"xref_id":"0014491"}}}


id: FYPO:0000932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"increased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"increased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000932"}


id: MONDO:0005908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly fatal contagious disease of goats and sheep caused by peste-des-petits-ruminants virus. The disease may be acute or subacute and is characterized by stomatitis, conjunctivitis, diarrhea, and pneumonia.","definition_xrefs":["MESH:D029021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peste des petits ruminants infectious disease","synonyms":[{"name":"Peste des petits ruminants","type":"related"},{"name":"Pseudorinderpest","type":"related"},{"name":"Small ruminant morbillivirus caused disease or disorder","type":"exact"},{"name":"Small ruminant morbillivirus disease or disorder","type":"exact"},{"name":"Small ruminant morbillivirus infectious disease","type":"exact"}],"termid":"MONDO:0005908","xrefs":{"Monarch":{"xref_id":"0005908"}}}


id: GO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-asparagine + 2-oxoglutarate + O2 = peptidyl 3-hydroxy-L-asparagine + succinate + CO2.","definition_xrefs":["GOC:reh","RHEA:54260","PMID:12215170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"[protein]-asparagine 3-dioxygenase activity","secondary_identifiers":["GO:0102113"],"synonyms":[{"name":"hypoxia-inducible factor-asparagine oxygenase activity","type":"narrow"},{"name":"peptidyl-asparagine 3-dioxygenase activity","type":"exact"}],"termid":"GO:0036140"}


id: FYPO:0003754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multiple mitotic spindles","synonyms":[{"name":"additional mitotic spindles present during vegetative growth","type":"exact"},{"name":"extra mitotic spindles during vegetative growth","type":"exact"},{"name":"increased number of mitotic spindles","type":"exact"},{"name":"mitotic spindles present in greater numbers during vegetative growth","type":"exact"},{"name":"multiple spindles during mitosis","type":"exact"},{"name":"multiple spindles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003754"}


id: PBO:0029455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_import","termid":"PBO:0029455"}


id: MONDO:0013064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple synostoses syndrome in which the cause of the disease is a mutation in the FGF9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synostoses syndrome","termid":"MONDO:0017923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple synostoses syndrome 3","secondary_identifiers":["MEDGEN:414116","MESH:C567839","OMIM:612961","GARD:15597","UMLS:C2751826","DOID:0081319"],"synonyms":[{"name":"FGF9 multiple synostoses syndrome","type":"exact"},{"name":"SYNS3","type":"related"},{"name":"multiple synostoses syndrome 3","type":"exact"},{"name":"multiple synostoses syndrome caused by mutation in FGF9","type":"exact"},{"name":"multiple synostoses syndrome type 3","type":"exact"}],"termid":"MONDO:0013064","xrefs":{"Monarch":{"xref_id":"0013064"}}}


id: PBO:0053489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 466","termid":"PBO:0053489"}


id: MONDO:0030920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 54","secondary_identifiers":["OMIM:617799","MEDGEN:1614787","GARD:16474","UMLS:C4540484","DOID:0080230"],"synonyms":[{"name":"MRD54","type":"related"},{"name":"autosomal dominant intellectual disability 54","type":"related"},{"name":"autosomal dominant mental retardation 54","type":"related"},{"name":"intellectual disability, autosomal dominant 54","type":"exact"},{"name":"mental retardation, autosomal dominant 54","type":"related"}],"termid":"MONDO:0030920","xrefs":{"Monarch":{"xref_id":"0030920"}}}


id: PBO:0080943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1 like","termid":"PBO:0080943"}


id: MONDO:0021233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear neoplasm","secondary_identifiers":["NCIT:C3000","MEDGEN:4431","UMLS:C0013449"],"synonyms":[{"name":"Ear neoplasms","type":"exact"},{"name":"Ear tumor","type":"exact"},{"name":"Ear tumour","type":"exact"},{"name":"ear neoplasm (disease)","type":"exact"},{"name":"ear tumor","type":"exact"},{"name":"ear tumour","type":"exact"},{"name":"neoplasm of Ear","type":"exact"},{"name":"neoplasm of ear","type":"exact"},{"name":"neoplasm of the Ear","type":"exact"},{"name":"tumor of Ear","type":"exact"},{"name":"tumor of ear","type":"exact"},{"name":"tumor of the Ear","type":"exact"},{"name":"tumour of Ear","type":"exact"},{"name":"tumour of ear","type":"exact"},{"name":"tumour of the Ear","type":"exact"}],"termid":"MONDO:0021233","xrefs":{"Monarch":{"xref_id":"0021233"}}}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: GO:0071501
data:
  {"annotated_genes":["SJAG_02682","SJAG_03345","SJAG_01150","SJAG_03568","SJAG_04018","SJAG_00293","SJAG_00642","SJAG_00718","SJAG_02703","SJAG_01632","SJAG_01657","SJAG_01253","SJAG_05304","SJAG_04151","SJAG_03501","SJAG_02104","SJAG_04384","SJAG_01307","SJAG_05286","SJAG_04573","SJAG_03302","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90711,105444,111294],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[113030,80207,62232,113029],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000640"},{"annotations":[64702,66013,88728,70480,118070,92117,117851,101634,88446,112154,89115,103502,112407,115995,93364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032933"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol depletion","termid":"GO:0006991"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sterol depletion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cellular sterol depletion response","type":"exact"}],"termid":"GO:0071501","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: MONDO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, pathological complication associated with diabetes mellitus, where retinal damages are incurred due to microaneurysms in the vasculature of the retina, progressively leading to abnormal blood vessel growth, and swelling and leaking of fluid from blood vessels, resulting in vision loss or blindness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"diabetic retinopathy","secondary_identifiers":["EFO:0003770","UMLS:C0011884","DOID:8947","MEDGEN:3786","SCTID:4855003","icd11.foundation:1006882070","MESH:D003930","NCIT:C34538","ICD9:362.0"],"synonyms":[{"name":"retinal abnormality - diabetes-related","type":"exact"}],"termid":"MONDO:0005266","xrefs":{"Monarch":{"xref_id":"0005266"}}}


id: GO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=3 symmetry. The T=3 capsid is composed of 12 pentameric and 20 hexameric capsomeres.","definition_xrefs":["VZ:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=3 icosahedral viral capsid","termid":"GO:0039617"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: PR:O13787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec62 gene.","definition_xrefs":["UniProtKB:O13787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.09","synonyms":[{"name":"Spom972h-sec62","type":"exact"}],"termid":"PR:O13787"}


id: MONDO:0100193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver failure that develops slowly and gradually for some time, possibly for years, often as the result of cirrhosis, or malnutrition.","direct_ancestors":[{"relation_name":"is_a","term_name":"liver failure","termid":"MONDO:0100192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic liver failure","secondary_identifiers":["MEDGEN:423539","NCIT:C84428","UMLS:C2936476"],"synonyms":[{"name":"ESLD","type":"exact"},{"name":"end stage liver disease","type":"exact"},{"name":"end stage liver disease (decompensated liver disease)","type":"exact"},{"name":"end-stage liver disease","type":"exact"}],"termid":"MONDO:0100193","xrefs":{"Monarch":{"xref_id":"0100193"}}}


id: FYPO:0000692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}


id: MONDO:0019216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of amino acid transport","secondary_identifiers":["SCTID:16784003","Orphanet:79166","GARD:18948","UMLS:C0268641","MEDGEN:541381","ICD9:270.0","icd11.foundation:1631611896"],"synonyms":[{"name":"disorder of amino acid absorption and transport","type":"related"},{"name":"inborn disorder of amino acid absorption and transport","type":"exact"}],"termid":"MONDO:0019216","xrefs":{"Monarch":{"xref_id":"0019216"}}}


id: GO:1903768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of taste receptor activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:16720576","GO_REF:0000088","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"taste receptor complex","termid":"GO:1903768"}


id: PR:O94439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsc1 gene.","definition_xrefs":["UniProtKB:O94439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein fsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.05c","synonyms":[{"name":"Spom972h-fsc1","type":"exact"}],"termid":"PR:O94439"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: MONDO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of well differentiated liposarcoma occurring most often in the retroperitoneum. It is characterized by the presence of a predominant inflammatory infiltrate composed of lymphoplasmacytic aggregates.","definition_xrefs":["NCIT:C6508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"well-differentiated liposarcoma","termid":"MONDO:0005103"},{"relation_name":"is_a","term_name":"atypical lipomatous tumor","termid":"MONDO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"inflammatory liposarcoma","secondary_identifiers":["MEDGEN:234588","UMLS:C1370890","DOID:8233"],"synonyms":[{"name":"inflammatory liposarcoma","type":"exact"}],"termid":"MONDO:0004510","xrefs":{"Monarch":{"xref_id":"0004510"}}}


id: FYPO:0005574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nuclear transport during meiosis","synonyms":[{"name":"abnormal nuclear transport during meiotic nuclear division","type":"related"}],"termid":"FYPO:0005574"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04890","SJAG_04680","SJAG_04848","SJAG_02386","SJAG_04181","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75911,76703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[103665,77169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[115316,59389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["PMID:24904644","PMID:9851972","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: PBO:0044191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like","termid":"PBO:0044191"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: PBO:0041316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 2","termid":"PBO:0041316"}


id: SO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding asparaginyl tRNA (SO:0000256).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine_tRNA_primary_transcript","synonyms":[{"name":"asparagine tRNA primary transcript","type":"exact"}],"termid":"SO:0000213"}


id: FYPO:0002792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"output_of","term_name":"abnormal vacuole fusion during cellular hypotonic response","termid":"FYPO:0004483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during cellular hypotonic response","synonyms":[{"name":"fragmented vacuoles during cellular hypotonic response","type":"related"},{"name":"small vacuoles present in greater numbers during cellular hypotonic response","type":"exact"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during hypotonic stress","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002792"}


id: PBO:0031551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peptidase_activity","termid":"PBO:0031551"}


id: PBO:0066572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group CcEe antigens","termid":"PBO:0066572"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: GO:1905024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during ventricular cardiac muscle cell action potential.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:19893015","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ventricular cardiac muscle cell membrane repolarization","termid":"GO:0060307"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"regulates","term_name":"membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:0098915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"regulation of electrocardiogram T wave","type":"related"},{"name":"regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular repolarization","type":"related"}],"termid":"GO:1905024"}


id: GO:0051744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protochlorophyllide a + NADP+ = 3,8-divinyl protochlorophyllide a + NADPH + H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity (obsolete GO:0051744)","termid":"GO:0051744"}


id: GO:0015600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.4"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate porter activity (obsolete GO:0015600)","synonyms":[{"name":"glutamate/aspartate porter activity","type":"exact"}],"termid":"GO:0015600"}


id: PBO:0049419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase 1","termid":"PBO:0049419"}


id: PBO:0063487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 4","termid":"PBO:0063487"}


id: GO:0032993
data:
  {"annotated_genes":["SJAG_03927","SJAG_00302","SJAG_00335","SJAG_01354","SJAG_00814","SJAG_00729","SJAG_02074","SJAG_03092","SJAG_03722","SJAG_03543","SJAG_01777","SJAG_05239","SJAG_01762","SJAG_03685","SJAG_04245","SJAG_00857","SJAG_02098","SJAG_05979","SJAG_00884","SJAG_02194","SJAG_02394","SJAG_04150","SJAG_02182","SJAG_03855","SJAG_04994","SJAG_02362","SJAG_04210","SJAG_01378","SJAG_00307","SJAG_05301","SJAG_02607","SJAG_00336","SJAG_01864","SJAG_01267","SJAG_02172","SJAG_03941","SJAG_01873","SJAG_00327","SJAG_02818","SJAG_04341","SJAG_03451","SJAG_00863","SJAG_01010","SJAG_03542","SJAG_00272","SJAG_03120","SJAG_03047","SJAG_01624","SJAG_05197","SJAG_03942","SJAG_03206","SJAG_01523","SJAG_01698","SJAG_02348","SJAG_02800","SJAG_04062","SJAG_02627","SJAG_04995","SJAG_03780","SJAG_00874","SJAG_04877","SJAG_02667","SJAG_00303","SJAG_00536","SJAG_00696"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74708,72148,76624,77015],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[101585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[64238,109942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990879"},{"annotations":[78652,76847,102352,72750],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[82070,78976,115849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[63601,57179,107384,58553,78795,61800,110962,61742,111219,93411,112760,67319,113153,73747,75542,107604,80052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031261"},{"annotations":[81139,72117,82037,81755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"},{"annotations":[119018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"},{"annotations":[112415,70502,78878,74410,79566,78243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[75540,107387,110133,67318,61799,61741,107607,73431,112763,58551,102845,63600,111222,110965,57177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005656"},{"annotations":[112096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043601"},{"annotations":[78456,61578,60894,112162,112163,112188,112189,74960,75545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000786"},{"annotations":[99231,115541,94581,89226,91313,81639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070187"},{"annotations":[107489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000782"},{"annotations":[72121,79338,79046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097550"}]},"cv_name":"cellular_component","definition":"A macromolecular complex containing both protein and DNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00327":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01378":null,"SJAG_01523":null,"SJAG_01624":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02194":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_03047":null,"SJAG_03092":null,"SJAG_03120":null,"SJAG_03206":null,"SJAG_03451":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03685":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03927":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_04062":null,"SJAG_04150":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04341":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_05301":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-DNA complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:24184107":null},"synonyms":[{"name":"DNA-protein complex","type":"exact"}],"termid":"GO:0032993","terms_by_termid":{"GO:0000782":null,"GO:0000786":null,"GO:0000811":null,"GO:0005656":null,"GO:0005658":null,"GO:0005662":null,"GO:0031261":null,"GO:0043505":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null,"GO:0070187":null,"GO:0097550":null,"GO:0140573":null,"GO:1990879":null}}


id: PBO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp104","termid":"PBO:0002950"}


id: MONDO:0030531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 65","secondary_identifiers":["DOID:0112354","MEDGEN:1794277","OMIM:619712","UMLS:C5562067"],"synonyms":[{"name":"SPGF65","type":"exact"}],"termid":"MONDO:0030531","xrefs":{"Monarch":{"xref_id":"0030531"}}}


id: FYPO:0005441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase","type":"exact"},{"name":"abolished protein localization to microtubule during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein absent from microtubule during mitotic interphase","type":"related"},{"name":"protein localization to microtubule abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0005441"}


id: PBO:0057464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 583","termid":"PBO:0057464"}


id: PBO:0079455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 8","termid":"PBO:0079455"}


id: MONDO:0007760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlipoproteinemia, type II, and deafness","secondary_identifiers":["OMIM:144300","MEDGEN:326732","UMLS:C1840425","MESH:C564170"],"synonyms":[{"name":"hyperlipoproteinemia, type II, and deafness","type":"exact"}],"termid":"MONDO:0007760","xrefs":{"Monarch":{"xref_id":"0007760"}}}


id: PBO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9 pseudogene 1","termid":"PBO:0047658"}


id: PBO:0077706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I3, cardiac type","termid":"PBO:0077706"}


id: GO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and transmembrane protease serine 7 (TMPRSS7); formation of the complex inhibits the serine protease activity of transmembrane protease serine 7.","definition_xrefs":["PMID:15853774","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-TMPRSS7 complex","synonyms":[{"name":"PCI-TMPRSS7 complex","type":"exact"},{"name":"SERPINA5-TMPRSS7 complex","type":"exact"},{"name":"plasma serine protease inhibitor-TMPRSS7 complex","type":"exact"},{"name":"protein C inhibitor-matriptase-3 complex","type":"exact"},{"name":"protein C inhibitor-transmembrane protease serine 7 complex","type":"exact"},{"name":"serpin A5-TMPRSS7 complex","type":"exact"}],"termid":"GO:0036024"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: MONDO:0800137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A monogenic autoinflammatory disorder caused by a de novo activating mutation, p.Tyr515∗, in hematopoietic cell kinase (HCK). The disease is characterized by cutaneous vasculitis and chronic pulmonary inflammation that progresses to fibrosis.","definition_xrefs":["PMID:34536415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset pulmonary and cutaneous vasculitis","termid":"MONDO:0800137","xrefs":{"Monarch":{"xref_id":"0800137"}}}


id: GO:0032958
data:
  {"annotated_genes":["SJAG_02321","SJAG_03409","SJAG_00321","SJAG_00244","SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58629,72982,76545,77283,92855],"is_not":false,"summary":null,"term":"GO:0032958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"inositol phosphate anabolism","type":"exact"},{"name":"inositol phosphate biosynthesis","type":"exact"},{"name":"inositol phosphate formation","type":"exact"},{"name":"inositol phosphate synthesis","type":"exact"},{"name":"myo-inositol phosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032958","terms_by_termid":{"GO:0032958":null}}


id: GO:0009578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an etioplast but excluding the prothylakoid space. It contains the etioplast DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast stroma","termid":"GO:0009578"}


id: PBO:0004573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine hydroxylase Sur2","termid":"PBO:0004573"}


id: GO:0010716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix organization","termid":"GO:1903054"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix disassembly","synonyms":[{"name":"down regulation of extracellular matrix disassembly","type":"exact"},{"name":"down-regulation of extracellular matrix disassembly","type":"exact"},{"name":"downregulation of extracellular matrix disassembly","type":"exact"},{"name":"inhibition of extracellular matrix disassembly","type":"narrow"},{"name":"negative regulation of extracellular matrix breakdown","type":"exact"},{"name":"negative regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010716"}


id: GO:2001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"}


id: GO:0160258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle membrane contact site between the endoplasmic reticulum (ER) membrane and the trans-Golgi network (TGN) membrane.","definition_xrefs":["PMID:31732717","PMID:30275117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-trans-Golgi network membrane contact site","termid":"GO:0160258"}


id: GO:1904400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroid stimulating hormone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:11238928","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Thyroid stimulating hormone","termid":"GO:1904400"}


id: PBO:0058777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7111","termid":"PBO:0058777"}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["MEDGEN:1375478","NCIT:C129441","UMLS:C4330671"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: PBO:0088098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal groth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0088098"}


id: GO:0019559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including imidazol-5-yl-lactate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-histidine catabolic process to imidazol-5-yl-lactate","secondary_identifiers":["MetaCyc:HISTDEG-PWY"],"synonyms":[{"name":"histidine breakdown to imidazol-5-yl-lactate","type":"exact"},{"name":"histidine degradation to imidazol-5-yl-lactate","type":"exact"}],"termid":"GO:0019559"}


id: PR:Q9UT22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.06c gene.","definition_xrefs":["UniProtKB:Q9UT22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.06c","synonyms":[{"name":"Spom972h-SPAC9.06c","type":"exact"}],"termid":"PR:Q9UT22"}


id: PBO:0086815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames in S288C encoded near the ribosomal DNA region of chromosome 12; YLR159W has a paralog, YLR156W, that arose from a segmental duplication","termid":"PBO:0086815"}


id: MONDO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral hepatitis that results in inflammation, located in liver, has material basis in Human herpesvirus 4 and has symptom headache, has symptom fatigue, has symptom fever, has symptom abdominal pain, has symptom nausea, and has symptom jaundice.","definition_xrefs":["PMID:17602362","DOID:0050204","PMID:16711324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus infection","termid":"MONDO:0005111"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005093"],"is_obsolete":false,"name":"Epstein-Barr virus hepatitis","secondary_identifiers":["UMLS:C0554114","MEDGEN:640194","SCTID:302919001"],"termid":"MONDO:0000286","xrefs":{"Monarch":{"xref_id":"0000286"}}}


id: SO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of a mobile element when comparing a reference sequence (has mobile element) to a individual sequence (does not have mobile element).","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deletion","termid":"SO:0000159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_deletion","synonyms":[{"name":"mobile element deletion","type":"exact"}],"termid":"SO:0002066"}


id: MONDO:0009823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of glyoxylate metabolism characterized by the accumulation of oxalate due to a deficiency of the peroxisomal hepatic enzyme L-alanine: glyoxylate aminotransferase (AGT). Clinical presentation is variable, ranging from occasional symptomatic nephrolithiasis to nephrocalcinosis and end-stage renal disease with systemic involvement.","definition_xrefs":["Orphanet:93598"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","termid":"MONDO:0017753"},{"relation_name":"is_a","term_name":"primary hyperoxaluria","termid":"MONDO:0002474"},{"relation_name":"is_a","term_name":"alanine glyoxylate aminotransferase deficiency","termid":"MONDO:0100278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0037792"],"is_obsolete":false,"name":"primary hyperoxaluria type 1","secondary_identifiers":["icd11.foundation:692812009","MESH:C536414","NANDO:1200773","GARD:2835","SCTID:65520001","MEDGEN:75658","UMLS:C0268164","OMIM:259900","DOID:0111670","ICD9:271.8","NCIT:C123212"],"synonyms":[{"name":"AGXT primary hyperoxaluria","type":"exact"},{"name":"HP1","type":"related"},{"name":"Oxalosis 1","type":"related"},{"name":"PH1","type":"exact"},{"name":"alanine-glyoxylate aminotransferase deficiency","type":"related"},{"name":"glycolic aciduria","type":"exact"},{"name":"hepatic AGT deficiency","type":"related"},{"name":"hyperoxaluria, primary, type 1","type":"related"},{"name":"hyperoxaluria, primary, type I","type":"related"},{"name":"peroxisomal alanine glyoxylate aminotransferase deficiency","type":"related"},{"name":"peroxisomal alanine-glyoxylate aminotransferase deficiency","type":"exact"},{"name":"peroxisomal alanine:glyoxylate aminotransferase deficiency","type":"related"},{"name":"primary hyperoxaluria caused by mutation in AGXT","type":"exact"},{"name":"primary hyperoxaluria type 1","type":"exact"},{"name":"primary hyperoxaluria type I","type":"exact"},{"name":"serine pyruvate aminotransferase deficiency","type":"related"},{"name":"serine:pyruvate aminotransferase deficiency","type":"related"}],"termid":"MONDO:0009823","xrefs":{"Monarch":{"xref_id":"0009823"}}}


id: PBO:0055375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2804","termid":"PBO:0055375"}


id: MONDO:0004412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, aggressive carcinoma of the sweat glands arising from malignant transformation of a long standing spiradenoma. It usually grows in the upper extremities, lower extremities, trunk, and head and neck. It has the tendency to recur and metastasize most often to the lymph nodes, bones, and lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"malignant spiradenoma","secondary_identifiers":["NCIT:C5117","DOID:7960","SCTID:403942003","UMLS:C1266063","ICDO:8403/3","MEDGEN:266097"],"synonyms":[{"name":"Spiradenocarcinoma","type":"exact"},{"name":"malignant eccrine spiradenoma","type":"exact"},{"name":"malignant eccrine spiradenoma (morphologic abnormality)","type":"exact"},{"name":"malignant spiradenoma","type":"exact"},{"name":"spiradenoma, malignant","type":"exact"}],"termid":"MONDO:0004412","xrefs":{"Monarch":{"xref_id":"0004412"}}}


id: GO:0019813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex composed of two subunits, Res and Mod, that functions as an endonuclease and cleaves DNA. Cleavage will only occur when there are two un-methylated copies of a specific recognition site in an inverse orientation on the DNA. Cleavage occurs at a specific distance away from one of the recognition sites. The Mod subunit can act alone as a methyltansferase. DNA restriction systems such as this are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"type III site-specific deoxyribonuclease complex","synonyms":[{"name":"type III restriction enzyme complex","type":"exact"}],"termid":"GO:0019813"}


id: PBO:0081641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF567 divergent transcript","termid":"PBO:0081641"}


id: PBO:0073338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 15, pseudogene","termid":"PBO:0073338"}


id: MONDO:0010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the CASK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 4","secondary_identifiers":["MEDGEN:336965","OMIM:300422","UMLS:C1845546"],"synonyms":[{"name":"CASK FG syndrome","type":"exact"},{"name":"FG syndrome 4","type":"exact"},{"name":"FG syndrome caused by mutation in CASK","type":"exact"},{"name":"FG syndrome caused by mutation in cask","type":"exact"},{"name":"FG syndrome type 4","type":"exact"},{"name":"FGS4","type":"related"},{"name":"X-linked intellectual disability with or without nystagmus","type":"related"},{"name":"cask FG syndrome","type":"exact"},{"name":"intellectual disability, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, X-linked, with or without Nystagmus","type":"related"},{"name":"mental retardation, with or without nystagmus","type":"exact"}],"termid":"MONDO:0010318","xrefs":{"Monarch":{"xref_id":"0010318"}}}


id: GO:0018621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-sulfobenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + NAD+ + sulfite.","definition_xrefs":["RHEA:13937","EC:1.14.12.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-sulfobenzoate 3,4-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0293","KEGG_REACTION:R01636","MetaCyc:4-SULFOBENZOATE-34-DIOXYGENASE-RXN"],"synonyms":[{"name":"4-sulfobenzoate 3,4-dioxygenase system","type":"related"},{"name":"4-sulfobenzoate dioxygenase activity","type":"related"},{"name":"4-sulfobenzoate,NADH:oxygen oxidoreductase (3,4-hydroxylating, sulfite-forming)","type":"related"},{"name":"4-sulphobenzoate 3,4-dioxygenase activity","type":"exact"}],"termid":"GO:0018621"}


id: PBO:0059692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 58","termid":"PBO:0059692"}


id: GO:0097443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.","definition_xrefs":["NIF_Subcellular:sao1028571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"sorting endosome","synonyms":[{"name":"MVB-tubule complex","type":"related"}],"termid":"GO:0097443"}


id: PBO:0004020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Mbx1","termid":"PBO:0004020"}


id: PBO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog Rhp16","termid":"PBO:0005007"}


id: PBO:0070971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 9","termid":"PBO:0070971"}


id: GO:0050822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide stabilization","synonyms":[{"name":"peptide stabilisation","type":"exact"},{"name":"peptide stabilization activity","type":"related"}],"termid":"GO:0050822"}


id: MONDO:0021348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the testis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of testis","secondary_identifiers":["UMLS:C0039590","SCTID:126900000","ICD9:239.5","ONCOTREE:TESTIS","MEDGEN:52675","NCIT:C3404"],"synonyms":[{"name":"neoplasm of testis","type":"exact"},{"name":"neoplasm of the testis","type":"exact"},{"name":"testicular neoplasm","type":"exact"},{"name":"testicular tumor","type":"exact"},{"name":"testicular tumour","type":"exact"},{"name":"testis neoplasm","type":"exact"},{"name":"testis neoplasm (disease)","type":"exact"},{"name":"testis tumor","type":"exact"},{"name":"testis tumour","type":"exact"},{"name":"tumor of testis","type":"exact"},{"name":"tumor of the testis","type":"exact"},{"name":"tumour of testis","type":"exact"},{"name":"tumour of the testis","type":"exact"}],"termid":"MONDO:0021348","xrefs":{"Monarch":{"xref_id":"0021348"}}}


id: GO:0106076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + lysine in peptide = CoA + N-succinyl-lysine-peptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide-lysine-N-succinyltransferase activity","termid":"GO:0106076"}


id: PBO:0078357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 3-1","termid":"PBO:0078357"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: MONDO:0100176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder associated with variation(s) in the AP4 genes: AP4B1, AP4E1, AP4M1, and AP4S1. The phenotypes observed in individuals with genetic variants in these genes are often complex and include intellectual disability, spastic paraplegia, microcephaly, brain abnormalities, and seizures.","definition_xrefs":["PMID:30543385","PMID:29193663","PMID:29430868","PMID:32171285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-4 deficiency syndrome","synonyms":[{"name":"AP-4 deficiency syndrome","type":"exact"}],"termid":"MONDO:0100176","xrefs":{"Monarch":{"xref_id":"0100176"}}}


id: MONDO:0015847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vaginal malformation (obsolete MONDO:0015847)","secondary_identifiers":["Orphanet:180151"],"termid":"MONDO:0015847","xrefs":{"Monarch":{"xref_id":"0015847"}}}


id: GO:1904569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21685449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of selenocysteine incorporation","termid":"GO:1904569"}


id: PBO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 1","termid":"PBO:0060293"}


id: PBO:0063071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine oxidase","termid":"PBO:0063071"}


id: PBO:0048159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD4 divergent transcript","termid":"PBO:0048159"}


id: PBO:0040906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 10","termid":"PBO:0040906"}


id: GO:0060535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage in the trachea are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage morphogenesis","termid":"GO:0060536"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"},{"relation_name":"part_of","term_name":"trachea cartilage development","termid":"GO:0060534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage morphogenesis","termid":"GO:0060535"}


id: PBO:0075452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 4","termid":"PBO:0075452"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: MONDO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 22 is a rare condition caused by having an abnormal chromosome 22 that forms a ring. In this chromosome abnormality,a segment on the short (p) arm and a segment on the long (q) arm of 22 are missing. The amount of material lost varies from person to person. The remaining ends of chromosome 22 have joined together to make a ring shape. Chromosome 22 is an acrocentric chromosome, meaning that the centromere is near one end, creating a very small short (p) arm that does not contain genes that are relevant to development. Thus, only the lost genes on the long (q) arm matter. Knowing the breakpoint in the long arm is likely more helpful. Most cases are sporadic (happen by chance) and occur in people with no history of the condition in their family.","definition_xrefs":["GARD:0001336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 22","secondary_identifiers":["Orphanet:1446","NORD:948","GARD:1336","MEDGEN:539299","MESH:C536795","SCTID:13555004","UMLS:C0265492"],"synonyms":[{"name":"Chromosome 22 Ring","type":"exact"},{"name":"R22","type":"related"},{"name":"Ring 22","type":"related"},{"name":"Ring chromosome 22 syndrome","type":"related"},{"name":"Ring chromosome type 22","type":"exact"},{"name":"chromosome 22 ring","type":"related"},{"name":"r(22) syndrome","type":"exact"}],"termid":"MONDO:0015438","xrefs":{"Monarch":{"xref_id":"0015438"}}}


id: FYPO:0004953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000121","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal prospore membrane","synonyms":[{"name":"abnormal forespore membrane","type":"exact"}],"termid":"FYPO:0004953"}


id: FYPO:0005304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through interphase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic interphase","synonyms":[{"name":"decreased rate of mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression","type":"related"},{"name":"delayed mitotic interphase progression during vegetative growth","type":"related"},{"name":"increased duration of interphase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic interphase during vegetative growth","type":"exact"},{"name":"prolonged mitotic interphase","type":"exact"},{"name":"reduced rate of mitotic interphase progression","type":"related"}],"termid":"FYPO:0005304"}


id: GO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An amorphous structure surrounding the core of the centrosome, from which microtubules are nucleated; contains gamma-tubulin.","definition_xrefs":["GOC:mah","GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosomal corona","termid":"GO:0031592"}


id: GO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP biosynthetic process","synonyms":[{"name":"GDP anabolism","type":"exact"},{"name":"GDP biosynthesis","type":"exact"},{"name":"GDP formation","type":"exact"},{"name":"GDP synthesis","type":"exact"}],"termid":"GO:0046711"}


id: PBO:0084099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor specific for Arf3p; localized to the bud neck and tip; required for localization of Arf3p to the bud neck and tip","termid":"PBO:0084099"}


id: PBO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6 (predicted)","termid":"PBO:0001579"}


id: PBO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 3","termid":"PBO:0047646"}


id: MONDO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinct marginal thinning of the cornea which causes high degree of against-the-rule astigmatism","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Terrien marginal degeneration","secondary_identifiers":["GARD:22133","MEDGEN:543256","Orphanet:519410","UMLS:C0271283"],"synonyms":[{"name":"Terrien's marginal degeneration","type":"exact"}],"termid":"MONDO:0033818","xrefs":{"Monarch":{"xref_id":"0033818"}}}


id: PBO:0061542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 2","termid":"PBO:0061542"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: MONDO:0020291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic right-heart syndrome (HRHS) is a rare, cyanotic congenital heart malformation caused by underdevelopment of the right-sided heart structures (tricuspid valve, RV, pulmonary valve, and pulmonary artery) commonly associated with an atrial septal defect, ostium secundum type. Pulmonary blood flow is diminished and right-to-left shunting occurs at the atrial level, leading to dyspnea, fatigue, atrial arrhythmias, right-sided heart failure, hypoxemia, repeated miscarriages that were mostly due to hypoxemia and cyanosis. Two subtypes of HRHS have been characterized: pulmonary atresia-intact ventricular septum and right ventricular hypoplasia.","definition_xrefs":["Orphanet:98723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"univentricular cardiopathy","termid":"MONDO:0019820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic right heart syndrome","secondary_identifiers":["ICD10CM:Q22.6","DOID:0070315","GARD:2922","ICD9:746.89","MedDRA:10064962","SCTID:268180007","UMLS:C0344963","MEDGEN:83376","MedDRA:10050053","NCIT:C99053"],"synonyms":[{"name":"right hypoplastic heart syndrome","type":"exact"}],"termid":"MONDO:0020291","xrefs":{"Monarch":{"xref_id":"0020291"}}}


id: GO:0042123
data:
  {"annotated_genes":["SJAG_00218","SJAG_04483","SJAG_01835","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72814,76279,74760,77630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042124"}]},"cv_name":"molecular_function","definition":"Catalysis of the splitting and linkage of glucan molecules, resulting in glucan chain elongation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_04483":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucanosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042123","terms_by_termid":{"GO:0042124":null}}


id: PBO:0065299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 3","termid":"PBO:0065299"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: PBO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEPRO antisense RNA 1","termid":"PBO:0060886"}


id: MONDO:0019596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to testicular steroidogenesis defect (obsolete MONDO:0019596)","secondary_identifiers":["Orphanet:90787"],"synonyms":[{"name":"46,XY DSD due to testicular steroidogenesis defect","type":"exact"}],"termid":"MONDO:0019596","xrefs":{"Monarch":{"xref_id":"0019596"}}}


id: GO:0015504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cytosine(out) + H+(out) = cytosine(in) + H+(in).","definition_xrefs":["TC:2.A.39.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosine transmembrane transporter activity","termid":"GO:0015209"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cytosine:proton symporter activity","synonyms":[{"name":"cytosine permease activity","type":"related"},{"name":"cytosine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015504"}


id: MONDO:0013635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the DOCK6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 2","secondary_identifiers":["OMIM:614219","MEDGEN:481812","GARD:15775","UMLS:C3280182"],"synonyms":[{"name":"AOS2","type":"related"},{"name":"Adams-Oliver syndrome 2","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in DOCK6","type":"exact"},{"name":"Adams-Oliver syndrome type 2","type":"exact"},{"name":"DOCK6 Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0013635","xrefs":{"Monarch":{"xref_id":"0013635"}}}


id: PBO:0078737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1","termid":"PBO:0078737"}


id: PBO:0042463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4","termid":"PBO:0042463"}


id: GO:0006415
data:
  {"annotated_genes":["SJAG_04283","SJAG_03949","SJAG_00286","SJAG_02812","SJAG_00642","SJAG_05265","SJAG_01518","SJAG_02601","SJAG_01696","SJAG_02189","SJAG_03658","SJAG_00308","SJAG_00338","SJAG_02704","SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62707,79212],"is_not":false,"summary":null,"term":"GO:0006415"},{"annotations":[75606,60380,94298,108730,115629,60794,95988,108729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[98156,101595,95432,94995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[67826,70305,78308],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[75784],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).","definition_xrefs":["ISBN:019879276X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00308":null,"SJAG_00338":null,"SJAG_00642":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02189":null,"SJAG_02601":null,"SJAG_02704":null,"SJAG_02812":null,"SJAG_03658":null,"SJAG_03949":null,"SJAG_04283":null,"SJAG_05221":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006456","GO:0006443","Reactome:R-HSA-72764"],"synonyms":[{"name":"protein synthesis termination","type":"broad"},{"name":"translation termination","type":"exact"},{"name":"translational complex disassembly","type":"exact"}],"termid":"GO:0006415","terms_by_termid":{"GO:0002184":null,"GO:0006415":null,"GO:0006449":null,"GO:0045905":null,"GO:0070126":null}}


id: PBO:0026660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_inositol_starvation","termid":"PBO:0026660"}


id: PBO:0043962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma G, pseudogene","termid":"PBO:0043962"}


id: MONDO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondyloepimetaphyseal dysplasia with joint laxity (obsolete MONDO:0000186)","termid":"MONDO:0000186","xrefs":{"Monarch":{"xref_id":"0000186"}}}


id: MONDO:1010940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant histiocytosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant histiocytosis, non-human animal","termid":"MONDO:1010210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant histiocytosis, domestic cat","secondary_identifiers":["OMIA:000620-9685"],"termid":"MONDO:1010940","xrefs":{"Monarch":{"xref_id":"1010940"}}}


id: MONDO:0022746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 13","termid":"MONDO:0700029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13p duplication","secondary_identifiers":["MEDGEN:419282","MESH:C535450","UMLS:C2930906"],"synonyms":[{"name":"Duplication 13p","type":"related"},{"name":"chromosome 13p, trisomy","type":"related"},{"name":"trisomy 13p","type":"related"}],"termid":"MONDO:0022746","xrefs":{"Monarch":{"xref_id":"0022746"}}}


id: PBO:0040548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2","termid":"PBO:0040548"}


id: PBO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically induced MYC interacting lncRNA 1","termid":"PBO:0046435"}


id: GO:0006888
data:
  {"annotated_genes":["SJAG_04592","SJAG_02264","SJAG_01166","SJAG_04196","SJAG_01409","SJAG_04569","SJAG_04598","SJAG_04002","SJAG_03670","SJAG_00484","SJAG_00767","SJAG_03558","SJAG_03933","SJAG_01025","SJAG_03552","SJAG_00357","SJAG_04419","SJAG_00072","SJAG_04391","SJAG_02234","SJAG_00092","SJAG_04112","SJAG_03244","SJAG_04434","SJAG_02349","SJAG_01633","SJAG_04618","SJAG_04837","SJAG_02012","SJAG_01642","SJAG_04513","SJAG_00192","SJAG_02103","SJAG_02839","SJAG_02525","SJAG_03270","SJAG_05326","SJAG_03907","SJAG_00330","SJAG_03499","SJAG_01600","SJAG_03810","SJAG_01415","SJAG_00557","SJAG_01508","SJAG_01003","SJAG_01899","SJAG_05344","SJAG_02120","SJAG_02655","SJAG_03467","SJAG_00858","SJAG_00899","SJAG_00906","SJAG_01991","SJAG_05013","SJAG_02640","SJAG_02824","SJAG_04740","SJAG_02539","SJAG_04739","SJAG_04070","SJAG_01279","SJAG_00578","SJAG_02482","SJAG_04615","SJAG_04021","SJAG_04938","SJAG_04402","SJAG_04528","SJAG_03153","SJAG_04909","SJAG_00785","SJAG_02160","SJAG_05345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58057,59570,65008,68001,71612,72207,72725,72781,73228,73879,74030,74645,75400,75593,75658,75941,76264,76426,76690,76864,77083,77427,78112,78718,78753,79507,79801,80116,80551,80594,80695,80741,81020,81388,81678,87687,90637,91005,91585,92619,92706,93371,94520,95109,95549,97270,97415,97959,99853,100269,100602,101705,104146,105966,106381,106679,109067,110322,110415,112015,112274,114599,115976,116120,118434,118565],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[74772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090114"},{"annotations":[77408,78298,78874,80238,73104,76604,76962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[78407],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060628"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:jp","GOC:tb","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00092":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00357":null,"SJAG_00484":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00858":null,"SJAG_00899":null,"SJAG_00906":null,"SJAG_01003":null,"SJAG_01025":null,"SJAG_01166":null,"SJAG_01279":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01899":null,"SJAG_01991":null,"SJAG_02012":null,"SJAG_02103":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02482":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02824":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03244":null,"SJAG_03270":null,"SJAG_03467":null,"SJAG_03499":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03670":null,"SJAG_03810":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04419":null,"SJAG_04434":null,"SJAG_04513":null,"SJAG_04528":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04615":null,"SJAG_04618":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04837":null,"SJAG_04909":null,"SJAG_04938":null,"SJAG_05013":null,"SJAG_05326":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"endoplasmic reticulum to Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199977","GO:0048221","Reactome:R-HSA-159763"],"synonyms":[{"name":"ER to Golgi transport","type":"exact"},{"name":"ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"anterograde (ER to Golgi) transport","type":"exact"},{"name":"anterograde transport, ER to Golgi","type":"exact"},{"name":"anterograde transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, ER to Golgi","type":"exact"},{"name":"anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi","type":"exact"},{"name":"endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi transport","type":"exact"},{"name":"rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:0006888","terms_by_termid":{"GO:0006888":null,"GO:0060628":null,"GO:0090110":null,"GO:0090114":null}}


id: GO:0014069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense network of proteins within and adjacent to the postsynaptic membrane of an asymmetric, neuron-neuron synapse. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:14532281","GOC:ef","GOC:pr","GOC:jid","GOC:BHF","Wikipedia:Postsynaptic_density","GOC:sjp","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization","termid":"GO:0099572"},{"relation_name":"part_of","term_name":"asymmetric synapse","termid":"GO:0032279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density","secondary_identifiers":["GO:0097483","GO:0097481","NIF_Subcellular:sao1196688972"],"synonyms":[{"name":"neuronal postsynaptic density","type":"exact"},{"name":"post synaptic density","type":"exact"},{"name":"post-synaptic density","type":"exact"},{"name":"postsynaptic density of dendrite","type":"narrow"}],"termid":"GO:0014069"}


id: GO:0099036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of neuronal dense core vesicle membrane (obsolete GO:0099036)","termid":"GO:0099036"}


id: PBO:0077232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 8","termid":"PBO:0077232"}


id: FYPO:0008014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic M phase in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mlr","PMID:35970865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to CENP-A containing chromatin","termid":"FYPO:0004313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin during mitosis","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin during mitosis","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin during mitosis","type":"exact"}],"termid":"FYPO:0008014"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: _global:acts_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_negative_effect","termid":"_global:acts_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_negative_effect","secondary_identifiers":["RO:0004035"],"termid":"_global:acts_upstream_of,_negative_effect"}


id: PBO:0112753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3, Agm3","termid":"PBO:0112753"}


id: MONDO:0975827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 21","secondary_identifiers":["OMIM:301132"],"termid":"MONDO:0975827","xrefs":{"Monarch":{"xref_id":"0975827"}}}


id: PR:O14260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0592 membrane protein C7D4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.03c","synonyms":[{"name":"Spom972h-SPAC7D4.03c","type":"exact"}],"termid":"PR:O14260"}


id: PBO:0077513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM230 pseudogene 1","termid":"PBO:0077513"}


id: GO:0038151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 2 receptor (CCR2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR2 signaling pathway","termid":"GO:0038150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CCL2-activated CCR2 signaling pathway","synonyms":[{"name":"CCL2/CCR2 signaling pathway","type":"exact"}],"termid":"GO:0038151"}


id: MONDO:0009750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, with excessive myelin folding complex, autosomal recessive","secondary_identifiers":["OMIM:256855","MESH:C564947","MEDGEN:342491","UMLS:C1850385"],"synonyms":[{"name":"Charcot-Marie-Tooth disease with excessive myelin folding, autosomal recessive","type":"related"},{"name":"HMSN with excessive myelin Outfolding, autosomal recessive","type":"related"},{"name":"neuropathy, hereditary motor and sensory, with excessive myelin folding complex, autosomal recessive","type":"exact"}],"termid":"MONDO:0009750","xrefs":{"Monarch":{"xref_id":"0009750"}}}


id: PBO:0028575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_amino_acid_import_during_vegetative_growth","termid":"PBO:0028575"}


id: GO:0031951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid catabolic process","termid":"GO:0031949"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"positively_regulates","term_name":"glucocorticoid catabolic process","termid":"GO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucocorticoid catabolic process","synonyms":[{"name":"activation of glucocorticoid catabolic process","type":"narrow"},{"name":"stimulation of glucocorticoid catabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid catabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid catabolic process","type":"exact"},{"name":"upregulation of glucocorticoid catabolic process","type":"exact"}],"termid":"GO:0031951"}


id: SOFP:finished
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"If the annotation of the feature is complete","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished","termid":"SOFP:finished"}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: FYPO:0002543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea (obsolete FYPO:0002543)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to HU","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002543"}


id: PBO:0062505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 7 pseudogene","termid":"PBO:0062505"}


id: PBO:0028548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0028548"}


id: PBO:0073232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 5","termid":"PBO:0073232"}


id: PBO:0048513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2","termid":"PBO:0048513"}


id: GO:0072583
data:
  {"annotated_genes":["SJAG_03643","SJAG_00104","SJAG_03596","SJAG_01167","SJAG_05296","SJAG_04479","SJAG_02789","SJAG_01748","SJAG_03404","SJAG_00800","SJAG_02805","SJAG_00803","SJAG_01686","SJAG_04517","SJAG_04465","SJAG_04052","SJAG_00649","SJAG_05011","SJAG_05198","SJAG_04050","SJAG_03146","SJAG_00032","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58573,75392,76222,80047,81519,91019,91680,92063,94387,95791,102268,105264,107619,107899,110263,111258,111898,112499,117131,118504],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[110603,111250,118487],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into clathrin-coated pits, which then pinch off to form clathrin-coated endocytic vesicles.","definition_xrefs":["GOC:mah","PMID:9234965","PMID:18498251","PMID:8970738","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00104":null,"SJAG_00649":null,"SJAG_00800":null,"SJAG_00803":null,"SJAG_01167":null,"SJAG_01686":null,"SJAG_01748":null,"SJAG_02282":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_03146":null,"SJAG_03404":null,"SJAG_03596":null,"SJAG_03643":null,"SJAG_04050":null,"SJAG_04052":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04517":null,"SJAG_05011":null,"SJAG_05198":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"clathrin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CME","type":"exact"},{"name":"clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:0072583","terms_by_termid":{"GO:0072583":null,"GO:2000369":null}}


id: GO:1990493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of cyclin H and cyclin-dependent kinase 7 (CDK7). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:9857180"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin H-CDK7 complex (obsolete GO:1990493)","synonyms":[{"name":"cyclin H-CDK7 complex","type":"exact"}],"termid":"GO:1990493"}


id: GO:0034090
data:
  {"annotated_genes":["SJAG_00600","SJAG_01805","SJAG_04126","SJAG_01601","SJAG_04259","SJAG_00229","SJAG_03989","SJAG_03926","SJAG_01082","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114096,113377,93275,100794,101321,98631,104035,107378,112817,115503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of meiotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034090","terms_by_termid":{"GO:1990813":null}}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: FYPO:0003558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from repeat elements, such as LTRs, retrotransposons, or wtf elements, measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:24957674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased repeat element RNA level","synonyms":[{"name":"increased repeat element RNA accumulation","type":"related"},{"name":"increased repeat element RNA level during mitotic cell cycle","type":"related"},{"name":"increased repeat element RNA level during vegetative growth","type":"exact"},{"name":"increased repeat element transcript level","type":"exact"}],"termid":"FYPO:0003558"}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: PR:000049980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on a residue equivalent to Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Ser-423, MOD:00046.","definition_xrefs":["PRO:CNA","PMID:21561865","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(S423)","type":"exact"}],"termid":"PR:000049980"}


id: PBO:0063326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 2","termid":"PBO:0063326"}


id: PBO:0054581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1983","termid":"PBO:0054581"}


id: PBO:0088500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-amino-6-(5-phosphoribosylamino) uracil reductase Rib7","termid":"PBO:0088500"}


id: PBO:0078226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-1 (pseudogene)","termid":"PBO:0078226"}


id: PBO:0078570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51D, pseudogene","termid":"PBO:0078570"}


id: PBO:0057194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR365B and MIR4725 host gene","termid":"PBO:0057194"}


id: MONDO:0013969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the RMND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 11","secondary_identifiers":["GARD:17487","MEDGEN:1682397","Orphanet:324535","UMLS:C5190991","DOID:0111481","OMIM:614922"],"synonyms":[{"name":"COXPD11","type":"exact"},{"name":"Encephaloneuromyopathy, infantile, due to mitochondrial translation defect","type":"related"},{"name":"RMND1 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 11","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 11","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in RMND1","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 11","type":"exact"}],"termid":"MONDO:0013969","xrefs":{"Monarch":{"xref_id":"0013969"}}}


id: GO:0071043
data:
  {"annotated_genes":["SJAG_04321","SJAG_03939","SJAG_00701","SJAG_01064","SJAG_03984","SJAG_03745","SJAG_04006","SJAG_01830","SJAG_04360","SJAG_02622","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63429,76839,79459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071034"},{"annotations":[112345,111438,114975,72032,72377,99284,102519,117734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:15935759","PMID:16973436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0071043","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0077710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T3, fast skeletal type","termid":"PBO:0077710"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: FYECO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vivo.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vivo","termid":"FYECO:0000141"}


id: PR:O59858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione peroxidase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.03c","secondary_identifiers":["UniProtKB:O59858"],"synonyms":[{"name":"Spom972h-GPX8","type":"exact"}],"termid":"PR:O59858"}


id: MONDO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Injury to any of the cranial nerves or their nuclei in the brain resulting in muscle weakness.","definition_xrefs":["NCIT:C26941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nerve palsy","secondary_identifiers":["EFO:0009489","DOID:3817","MEDGEN:57717","UMLS:C0151311"],"synonyms":[{"name":"cranial nerve palsies","type":"related"},{"name":"cranial nerve palsy","type":"exact"},{"name":"cranial nerve paralysis","type":"exact"}],"termid":"MONDO:0002782","xrefs":{"Monarch":{"xref_id":"0002782"}}}


id: PBO:0067581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 738, pseudogene","termid":"PBO:0067581"}


id: MONDO:0012382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia in which the cause of the disease is a mutation in the HADH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"3-hydroxyacyl-CoA dehydrogenase deficiency","termid":"MONDO:0017715"},{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 4","secondary_identifiers":["MEDGEN:400646","MESH:C566493","SCTID:721236002","UMLS:C1864948","GARD:9870","Orphanet:71212","MESH:C535310","OMIM:609975","DOID:0070215"],"synonyms":[{"name":"3-Alpha-hydroxyacyl-Coenzyme A dehydrogenase deficiency","type":"related"},{"name":"3-alpha hydroxyacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-Coenzyme A dehydrogenase deficiency","type":"related"},{"name":"3-hydroxylacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"HADH deficiency","type":"related"},{"name":"HADH hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"HADHSC deficiency","type":"related"},{"name":"HHF4","type":"related"},{"name":"L-3-Alpha-hydroxyacyl-CoA dehydrogenase, short chain, deficiency","type":"related"},{"name":"M-SCHAD deficiency","type":"related"},{"name":"M/SCHAD","type":"related"},{"name":"SCHAD deficiency","type":"related"},{"name":"SCHAD deficiency, formerly","type":"related"},{"name":"had deficiency","type":"related"},{"name":"hyperinsulinemic hypoglycemia (disease) caused by mutation in HADH","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to HADH deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, 4","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, type 4","type":"exact"},{"name":"hyperinsulinism due to SCHAD deficiency","type":"exact"},{"name":"hyperinsulinism due to glutamodehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinism due to short chain 3-hydroxyacyl-coenzyme a dehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"medium and short chain 3-hydroxyacyl-CoA dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0012382","xrefs":{"Monarch":{"xref_id":"0012382"}}}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: GO:0033265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choline, the amine 2-hydroxy-N,N,N-trimethylethanaminium.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choline binding","termid":"GO:0033265"}


id: PBO:0056013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM8 homolog, U6 small nuclear RNA associated","termid":"PBO:0056013"}


id: GO:0034479
data:
  {"annotated_genes":["SJAG_02161"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97277],"is_not":false,"summary":null,"term":"GO:0034479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylglycerol + H2O = 1,2-diacylglycerol + glycerol 3-phosphate.","definition_xrefs":["GOC:mah","PMID:18434318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034479","terms_by_termid":{"GO:0034479":null}}


id: PBO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRA10A associated CGG repeat 1","termid":"PBO:0047916"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: PBO:0041172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruton tyrosine kinase","termid":"PBO:0041172"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PBO:0080971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand","termid":"PBO:0080971"}


id: PBO:0091252
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0091252"}


id: _global:immediately_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"immediately_precedes","termid":"_global:immediately_precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_upstream_of","secondary_identifiers":["RO:0002412"],"termid":"_global:immediately_causally_upstream_of"}


id: MONDO:0021527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the meningeal cluster.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of meninges","secondary_identifiers":["NCIT:C4957","ICD10CM:D32","UMLS:C0348426","MEDGEN:138093","SCTID:109913001"],"synonyms":[{"name":"benign meningeal neoplasm","type":"exact"},{"name":"benign meningeal neoplasms","type":"exact"},{"name":"benign meningeal tumor","type":"exact"},{"name":"benign meningeal tumors","type":"exact"},{"name":"benign meningeal tumour","type":"exact"},{"name":"benign meningeal tumours","type":"exact"},{"name":"benign meninges neoplasm","type":"exact"},{"name":"benign meninges tumor","type":"exact"},{"name":"benign meninges tumour","type":"exact"},{"name":"benign neoplasm of the meninges","type":"exact"},{"name":"benign neoplasms of meninges","type":"exact"},{"name":"benign neoplasms of the meninges","type":"exact"},{"name":"benign tumor of meninges","type":"exact"},{"name":"benign tumor of the meninges","type":"exact"},{"name":"benign tumour of meninges","type":"exact"},{"name":"benign tumour of the meninges","type":"exact"},{"name":"meningeal cluster benign neoplasm","type":"exact"},{"name":"meningeal tumors, benign","type":"exact"}],"termid":"MONDO:0021527","xrefs":{"Monarch":{"xref_id":"0021527"}}}


id: FYPO:0006453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a histone acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000652","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone acetyltransferase activity","synonyms":[{"name":"abnormal histone acetylase activity","type":"exact"}],"termid":"FYPO:0006453"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: MONDO:0011910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1C (obsolete MONDO:0011910)","secondary_identifiers":["DOID:0110302","MESH:C563362","NCIT:C148318","OMIM:607801","Orphanet:265","SCTID:719986000"],"termid":"MONDO:0011910","xrefs":{"Monarch":{"xref_id":"0011910"}}}


id: GO:0046442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aerobactin (C22H36N4O13), a hydroxamate iron transport compound. It is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobactin metabolic process","synonyms":[{"name":"aerobactin metabolism","type":"exact"}],"termid":"GO:0046442"}


id: PBO:0047911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(9)(p21)","termid":"PBO:0047911"}


id: PBO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4 (predicted)","termid":"PBO:0000607"}


id: GO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042529","GO:0042517","GO:0042523","GO:0042511","GO:0042520","GO:0042515","GO:0042526"],"synonyms":[{"name":"activation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"activation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"stimulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"up-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"up-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"upregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"upregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042531"}


id: PBO:0073432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 2","termid":"PBO:0073432"}


id: FYPO:0003948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal sulfite reductase activity","synonyms":[{"name":"abnormal sulphite reductase activity","type":"exact"}],"termid":"FYPO:0003948"}


id: FYPO:0005933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G1 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during mitotic G1 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G1 phase","type":"related"},{"name":"decreased protein level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005933"}


id: PBO:0080993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB24 divergent transcript","termid":"PBO:0080993"}


id: GO:0047096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + androst-4-ene-3,17-dione + O2 = A + H2O + testololactone.","definition_xrefs":["EC:1.14.99.12","RHEA:22696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 17-alpha-monooxygenase activity","termid":"GO:0004508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"androst-4-ene-3,17-dione monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01833","MetaCyc:1.14.99.12-RXN"],"synonyms":[{"name":"4-androstene-3,17-dione monooxygenase activity","type":"exact"},{"name":"androst-4-ene-3,17-dione 17-oxidoreductase activity","type":"related"},{"name":"androst-4-ene-3,17-dione hydroxylase activity","type":"related"},{"name":"androst-4-ene-3,17-dione-hydrogen-donor:oxygen oxidoreductase (13-hydroxylating, lactonizing)","type":"related"},{"name":"androstene-3,17-dione hydroxylase activity","type":"exact"},{"name":"androstenedione monooxygenase activity","type":"related"}],"termid":"GO:0047096"}


id: PR:O14443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02232","PRO:DNx","PANTHER:PTHR21231:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.12c","secondary_identifiers":["UniProtKB:O14443"],"synonyms":[{"name":"Spom972h-GPN3","type":"exact"},{"name":"factor of eukaryotic transcription 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14443"}


id: PBO:0069540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 810, pseudogene","termid":"PBO:0069540"}


id: MONDO:0025138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A calicivirus infection of swine characterized by hydropic degeneration of the oral and cutaneous epithelia.","definition_xrefs":["MESH:D014720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"Caliciviridae infectious disease, non-human animal","termid":"MONDO:0700208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular exanthema of swine","synonyms":[{"name":"swine vesicular Exanthemas","type":"related"},{"name":"swine vesicular exanthema","type":"related"}],"termid":"MONDO:0025138","xrefs":{"Monarch":{"xref_id":"0025138"}}}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: MONDO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethritis","secondary_identifiers":["ICD9:099.40","MEDGEN:52934","ICD9:597.80","EFO:0003878","DOID:1343","MESH:D014526","SCTID:84619001","UMLS:C0041976","NCIT:C26904","HP:0500006"],"synonyms":[{"name":"Nongonococcal urethritis","type":"narrow"},{"name":"inflammation of urethra","type":"exact"},{"name":"non-gonococcal urethritis","type":"exact"},{"name":"urethra inflammation","type":"exact"},{"name":"urethritis","type":"exact"},{"name":"urethritis (disease)","type":"exact"}],"termid":"MONDO:0005297","xrefs":{"Monarch":{"xref_id":"0005297"}}}


id: MONDO:0004942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the structures of the orbit. Representative examples include mucosa-associated lymphoid tissue lymphoma, follicular lymphoma, and diffuse large B-cell lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbital cancer","termid":"MONDO:0002889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit lymphoma","secondary_identifiers":["GARD:9719","MESH:C537131","SCTID:13048006","DOID:9986","UMLS:C0271333","MEDGEN:75744","NCIT:C6244"],"synonyms":[{"name":"lymphoma of orbit","type":"exact"},{"name":"lymphoma of the orbit","type":"exact"},{"name":"orbital lymphoma","type":"related"},{"name":"primary orbit lymphoma","type":"exact"},{"name":"primary orbital lymphoma","type":"related"}],"termid":"MONDO:0004942","xrefs":{"Monarch":{"xref_id":"0004942"}}}


id: GO:1901501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xylene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to xylene","termid":"GO:1901501"}


id: MONDO:0009279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triple A syndrome is a very rare multisystem disease characterized by adrenal insufficiency with isolated glucocorticoid deficiency, achalasia, alacrima, autonomic dysfunction and neurodegeneration.","definition_xrefs":["Orphanet:869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"triple-A syndrome","secondary_identifiers":["MEDGEN:82889","NCIT:C131005","UMLS:C0271742","GARD:457","NANDO:1200410","OMIM:231550","SCTID:45414006","ICD9:255.41","MESH:C536008","DOID:0050602"],"synonyms":[{"name":"2A syndrome","type":"exact"},{"name":"3A syndrome","type":"exact"},{"name":"4A syndrome","type":"exact"},{"name":"AAA","type":"related"},{"name":"AAA syndrome","type":"exact"},{"name":"AAAS","type":"related"},{"name":"ACTH-resistant adrenal insufficiency, achalasia and alacrima","type":"related"},{"name":"Addisonian achalasia syndrome","type":"related"},{"name":"Addisonian-achalasia syndrome","type":"related"},{"name":"Allgrove syndrome","type":"exact"},{"name":"Double A syndrome","type":"exact"},{"name":"achalasia addisonianism alacrimia syndrome","type":"related"},{"name":"achalasia alacrima syndrome","type":"related"},{"name":"achalasia-addisonianism-alacrima syndrome","type":"exact"},{"name":"achalasia-addisonianism-alacrimia syndrome","type":"exact"},{"name":"achalasia-alacrima syndrome","type":"related"},{"name":"adrenal insufficiency-achalasia-alacrima syndrome","type":"exact"},{"name":"alacrima-achalasia-addisonianism","type":"related"},{"name":"alacrima-achalasia-adrenal insufficiency neurologic disorder","type":"related"},{"name":"glucocorticoid deficiency and achalasia","type":"related"},{"name":"hypoadrenalism with achalasia","type":"related"},{"name":"quaternary A syndrome","type":"exact"},{"name":"triple A syndrome","type":"related"},{"name":"triple-a syndrome","type":"exact"}],"termid":"MONDO:0009279","xrefs":{"Monarch":{"xref_id":"0009279"}}}


id: PBO:0031567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_binding_phenotype","termid":"PBO:0031567"}


id: PBO:0085459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted lipase; binds variant medium clathrin chain Apm2p and contributes to its membrane recruitment; putative integral membrane protein that interacts with Rpp0p component of ribosomal stalk","termid":"PBO:0085459"}


id: PBO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 7","termid":"PBO:0042981"}


id: GO:0048633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle growth.","definition_xrefs":["PMID:15726494","GOC:lm","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle tissue growth","synonyms":[{"name":"activation of skeletal muscle growth","type":"narrow"},{"name":"stimulation of skeletal muscle growth","type":"narrow"},{"name":"up regulation of skeletal muscle growth","type":"exact"},{"name":"up-regulation of skeletal muscle growth","type":"exact"},{"name":"upregulation of skeletal muscle growth","type":"exact"}],"termid":"GO:0048633"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: PBO:0040527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1 pseudogene 1","termid":"PBO:0040527"}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: GO:0035107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage morphogenesis","termid":"GO:0035107"}


id: PBO:0054067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1414","termid":"PBO:0054067"}


id: PBO:0080672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wolframin ER transmembrane glycoprotein","termid":"PBO:0080672"}


id: GO:0033538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside, by a pathway in which galactan:galactan galactosyltransferase catalyzes chain elongation by transferring the alpha-galactosyl residue of one raffinose-family oligosaccharide to another.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ajugose biosynthetic process","termid":"GO:0033536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ajugose biosynthetic process using galactan:galactan galactosyltransferase","synonyms":[{"name":"ajugose anabolism using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose biosynthesis using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose formation using galactan:galactan galactosyltransferase","type":"exact"},{"name":"ajugose synthesis using galactan:galactan galactosyltransferase","type":"exact"}],"termid":"GO:0033538"}


id: MONDO:0009324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hartnup disease is a rare metabolic disorder belonging to the neutral aminoacidurias and characterized by abnormal renal and gastrointestinal transport of neutral amino acids (tryptophan, alanine, asparagine, glutamine, histidine, isoleucine, leucine, phenylalanine, serine, threonine, tyrosine and valine).","definition_xrefs":["Orphanet:2116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"excluded_subClassOf","term_name":"disorder of neutral amino acid transport","termid":"MONDO:0017687"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"Hartnup disease","secondary_identifiers":["MedDRA:10019165","NCIT:C84748","NANDO:2200487","OMIM:234500","UMLS:C0018609","MESH:D006250","GARD:6569","DOID:1060","NORD:1217","MEDGEN:6723","SCTID:80902009"],"synonyms":[{"name":"HND","type":"related"},{"name":"Hartnup disease","type":"exact"},{"name":"Hartnup disorder","type":"exact"},{"name":"aminoaciduria, Hartnup type","type":"exact"},{"name":"deficiency of tryptophan oxygenase","type":"exact"},{"name":"neutral 1 amino acid transport defect","type":"exact"},{"name":"neutral amino acid transport defect","type":"exact"}],"termid":"MONDO:0009324","xrefs":{"Monarch":{"xref_id":"0009324"}}}


id: MONDO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"optic atrophy-ataxia-peripheral neuropathy-global developmental delay syndrome","secondary_identifiers":["Orphanet:543470","GARD:22231","UMLS:C5681321","MEDGEN:1807322"],"termid":"MONDO:0034092","xrefs":{"Monarch":{"xref_id":"0034092"}}}


id: PBO:0077293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35B","termid":"PBO:0077293"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: GO:1902133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"(+)-secoisolariciresinol metabolic process","synonyms":[{"name":"(+)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902133"}


id: MOD:00372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues with a carbon-carbon bond to form 3'-(3'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:8937563","PubMed:8702710","RESID:AA0367","DeltaMass:0","PubMed:14249161","PubMed:637884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(3'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-(6,6'-dihydroxybiphenyl-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"3'-(L-tyros-3'-yl)-L-tyrosine","type":"exact"},{"name":"3,3'-BiTyr (Crosslink)","type":"exact"},{"name":"6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-bis(2-aminopropanoic acid)","type":"exact"},{"name":"alpha,alpha'-diamino-6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-dipropanoic acid","type":"exact"},{"name":"bityrosine","type":"exact"},{"name":"o,o-dityrosine","type":"exact"}],"termid":"MOD:00372"}


id: GO:0048030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a disaccharide. Disaccharides are sugars composed of two monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"disaccharide binding","termid":"GO:0048030"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: GO:0060908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the number of copies of extrachromosomal plasmid DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid maintenance","termid":"GO:0006276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid copy number maintenance","termid":"GO:0060908"}


id: FYPO:0001602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in vacuole","synonyms":[{"name":"decreased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"decreased vacuolar level of substance","type":"exact"},{"name":"reduced level of substance in vacuole","type":"exact"}],"termid":"FYPO:0001602"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: SOFP:symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"Community symbol","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"SOFP:symbol"}


id: PBO:0084657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minus-end-directed microtubule motor; functions in mitosis and meiosis, localizes to the spindle pole body and localization is dependent on functional Cik1p, required for nuclear fusion during mating; potential Cdc28p substrate","termid":"PBO:0084657"}


id: PBO:0026682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0026682"}


id: GO:0097350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of senescent neutrophils from the body by autoregulatory mechanisms.","definition_xrefs":["GOC:BHF","PMID:21957127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic cell clearance","termid":"GO:0043277"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neutrophil clearance","termid":"GO:0097350"}


id: PBO:0086961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of septin dynamics; involved in the regulation of septin dynamics at bud neck after mitotic entry, likely by stabilizing septin structure; regulated at post-translational level by cell cycle dependent phosphorylation; likely phosphorylated by Cdc28p and dephosphorylated by Cdc14p before cytokinesis; high-copy suppressor of synthetic lethality of sis2 sit4 double mutant; VHS2 has a paralog, MLF3, that arose from the whole genome duplication","termid":"PBO:0086961"}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_04464","SJAG_00514","SJAG_02332","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[114651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[89337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0050478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A6","termid":"PBO:0050478"}


id: MONDO:0010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemopoietic proliferation","secondary_identifiers":["UMLS:C1844026","MEDGEN:336101","OMIM:306930"],"synonyms":[{"name":"hemopoietic proliferation","type":"exact"}],"termid":"MONDO:0010605","xrefs":{"Monarch":{"xref_id":"0010605"}}}


id: GO:0047763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,4-dihydroxy-trans-cinnamate = S-adenosyl-L-homocysteine + 3-methoxy-4-hydroxy-trans-cinnamate.","definition_xrefs":["EC:2.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"caffeate O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-1104","RHEA:20225"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,4-dihydroxy-trans-cinnamate 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:caffeic acid-O-methyltransferase activity","type":"related"},{"name":"caffeate 3-O-methyltransferase activity","type":"related"},{"name":"caffeate methyltransferase activity","type":"related"}],"termid":"GO:0047763"}


id: PATO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"detached from","synonyms":[{"name":"detached","type":"exact"}],"termid":"PATO:0001453"}


id: PATO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a shape that resembles a many-lobed \\\"berry,\\\" such as a raspberry.","definition_xrefs":["wikipedia:https://en.wikipedia.org/wiki/Acinus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acinus","termid":"PATO:0002378"}


id: GO:0033910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotetraose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotetraohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.60-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotetraohydrolase activity","type":"related"},{"name":"G4-amylase activity","type":"related"},{"name":"exo-maltotetraohydrolase activity","type":"related"},{"name":"glucan 1,4-alpha-maltotetrahydrolase activity","type":"related"},{"name":"maltotetraose-forming amylase activity","type":"related"}],"termid":"GO:0033910"}


id: GO:0016505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase that is involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"peptidase activator activity involved in apoptotic process","synonyms":[{"name":"apoptotic protease activator activity","type":"narrow"}],"termid":"GO:0016505"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: PBO:0028976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_GSNO","termid":"PBO:0028976"}


id: GO:0010282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lytic vacuole that is maintained at acidic pH and has different tonoplast composition compared to the central vacuole. Found during leaf senescence and develops in the peripheral cytoplasm of cells that contain chloroplast.","definition_xrefs":["PMID:15743448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"senescence-associated vacuole","synonyms":[{"name":"senescence associated vacuole","type":"exact"}],"termid":"GO:0010282"}


id: MONDO:0005830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poxvirus infection of cattle characterized by the appearance of nodules on all parts of the skin.","definition_xrefs":["MESH:D008166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumpy skin disease","secondary_identifiers":["MEDGEN:9815","EFO:0007349","UMLS:C0024106"],"termid":"MONDO:0005830","xrefs":{"Monarch":{"xref_id":"0005830"}}}


id: GO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the Peyer's patch, nodular lymphoid structures on the serosal surface of the small intestine.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in Peyer's patch","termid":"GO:0002388"}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: PBO:0016971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair (predicted)","termid":"PBO:0016971"}


id: PBO:0002913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit E (predicted)","termid":"PBO:0002913"}


id: MONDO:0017140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L1 syndrome is a mild to severe congenital X-linked developmental disorder characterized by hydrocephalus of varying degrees of severity, intellectual deficit, spasticity of the legs, and adducted thumbs. The syndrome represents a spectrum of disorders including: X-linked hydrocephalus with stenosis of the aqueduct of Sylvius (HSAS), MASA syndrome, X-linked complicated hereditary spastic paraplegia type 1, and X-linked complicated corpus callosum agenesis.","definition_xrefs":["Orphanet:275543"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 syndrome","secondary_identifiers":["MEDGEN:1830362","GARD:12524","UMLS:C5779710","NORD:1343","icd11.foundation:1457804873"],"synonyms":[{"name":"CRASH syndrome","type":"exact"},{"name":"L1 syndrome","type":"exact"},{"name":"L1CAM syndrome","type":"exact"},{"name":"corpus callosum hypoplasia-retardation-adducted thumbs-spasticity-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0017140","xrefs":{"Monarch":{"xref_id":"0017140"}}}


id: FYPO:0002759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to pre-autophagosomal structure","synonyms":[{"name":"abolished protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"abolished protein localization to PAS","type":"exact"},{"name":"abolished protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"protein localization to pre-autophagosomal structure abolished","type":"exact"}],"termid":"FYPO:0002759"}


id: PBO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 5","termid":"PBO:0042979"}


id: GO:0033180
data:
  {"annotated_genes":["SJAG_01817","SJAG_00212","SJAG_04955","SJAG_01471","SJAG_01447","SJAG_01397","SJAG_04015","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87485,102196,98422,109442,61019,96117,118355,72972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.","definition_xrefs":["PMID:16449553","ISBN:0716743663","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033180","terms_by_termid":{"GO:0000221":null}}


id: GO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + taurine = AH(2) + NH4 + sulfoacetaldehyde.","definition_xrefs":["RHEA:18709","PMID:15073291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"taurine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07167","MetaCyc:TAURINE-DEHYDROGENASE-RXN","EC:1.4.99.2"],"synonyms":[{"name":"taurine:(acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"taurine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050323"}


id: PBO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 30","termid":"PBO:0070659"}


id: FYPO:0002287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to heat is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to heat","synonyms":[{"name":"decreased RNA accumulation during cellular response to heat","type":"related"},{"name":"decreased RNA level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to heat shock","type":"narrow"},{"name":"decreased transcript level during cellular response to heat","type":"exact"},{"name":"reduced RNA level during cellular response to heat","type":"exact"}],"termid":"FYPO:0002287"}


id: GO:0033083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation","termid":"GO:0033083"}


id: MONDO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 57","secondary_identifiers":["MEDGEN:1631180","DOID:0111635","UMLS:C4693893","OMIM:618003"],"synonyms":[{"name":"DFNB57","type":"narrow"},{"name":"deafness, autosomal recessive 57","type":"narrow"},{"name":"hearing loss, autosomal recessive 57","type":"exact"}],"termid":"MONDO:0033201","xrefs":{"Monarch":{"xref_id":"0033201"}}}


id: PBO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD5 pseudogene 1","termid":"PBO:0052228"}


id: MONDO:0010966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondrogenesis type 1B (ACG1B), a form of achondrogenesis, is a rare lethal skeletal dysplasia characterized by severe micromelia with very short fingers and toes, a flat face, a short neck, thickened soft tissue around the neck, hypoplasia of the thorax, protuberant abdomen, a hydropic fetal appearance and distinctive histological features of the cartilage.","definition_xrefs":["Orphanet:93298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"SLC26A2-related skeletal dysplasia","termid":"MONDO:0100592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"achondrogenesis type IB","secondary_identifiers":["DOID:0080055","MEDGEN:78547","OMIM:600972","GARD:460","UMLS:C0265274"],"synonyms":[{"name":"ACG1B","type":"related"},{"name":"Fraccaro achondrogenesis","type":"related"},{"name":"achondrogenesis Fraccaro type","type":"exact"},{"name":"achondrogenesis Ib","type":"exact"},{"name":"achondrogenesis type 1B","type":"related"},{"name":"achondrogenesis type IB","type":"exact"},{"name":"achondrogenesis, Fraccaro type","type":"related"},{"name":"achondrogenesis, Parenti-Fraccaro type","type":"exact"},{"name":"achondrogenesis, type 1B","type":"related"},{"name":"achondrogenesis, type IB","type":"related"}],"termid":"MONDO:0010966","xrefs":{"Monarch":{"xref_id":"0010966"}}}


id: PBO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor related to kappaB binding protein","termid":"PBO:0060961"}


id: PBO:0043621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 10","termid":"PBO:0043621"}


id: MONDO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the testis and is not associated with lymphoma in another anatomic site.","definition_xrefs":["NCIT:C6810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular lymphoma","secondary_identifiers":["ICD9:186.9","DOID:12253","MEDGEN:138110","SCTID:277664004","UMLS:C0349644","ONCOTREE:TLYM"],"synonyms":[{"name":"TLYM","type":"related"},{"name":"lymphoma of testis","type":"exact"},{"name":"lymphoma of the testis","type":"exact"},{"name":"malignant lymphoma of testis","type":"exact"},{"name":"primary testicular lymphoma","type":"exact"},{"name":"testicular lymphoma","type":"exact"}],"termid":"MONDO:0001472","xrefs":{"Monarch":{"xref_id":"0001472"}}}


id: FYPO:0002034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}


id: GO:0050271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an S-alkyl-L-cysteine + H2O = an alkyl thiol + NH3 + pyruvate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete S-alkylcysteine lyase activity (obsolete GO:0050271)","termid":"GO:0050271"}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: PBO:0091119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane chaperone for multipass membrane proteins, PAT complex subunit (asterix), Pat10","termid":"PBO:0091119"}


id: PBO:0079780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A1","termid":"PBO:0079780"}


id: MONDO:0006182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the digestive system and is characterized by the presence of a malignant glandular epithelial component and a malignant neuroendocrine component. At least 30% of either component should be present for the diagnosis to be made.","definition_xrefs":["NCIT:C95406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"digestive system mixed adenoneuroendocrine carcinoma","secondary_identifiers":["UMLS:C2987129","MEDGEN:459355","ICDO:8244/3","EFO:1000219"],"synonyms":[{"name":"MANEC","type":"exact"},{"name":"digestive system Mixed Adenoneuroendocrine cancer","type":"exact"},{"name":"digestive system mixed adenoneuroendocrine carcinoma","type":"exact"},{"name":"gastrointestinal MANEC","type":"exact"},{"name":"gastrointestinal mixed Adenoneuroendocrine carcinoma","type":"exact"},{"name":"mixed Adenoneuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0006182","xrefs":{"Monarch":{"xref_id":"0006182"}}}


id: PBO:0080934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated protein 1","termid":"PBO:0080934"}


id: GO:0004609
data:
  {"annotated_genes":["SJAG_02902","SJAG_02980","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62694,72655,80948],"is_not":false,"summary":null,"term":"GO:0004609"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + phosphatidyl-L-serine = CO2 + phosphatidylethanolamine.","definition_xrefs":["EC:4.1.1.65","RHEA:20828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphatidylserine decarboxylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSPHASERDECARB-RXN","Reactome:R-HSA-1483212","KEGG_REACTION:R02055"],"synonyms":[{"name":"PS decarboxylase activity","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase (phosphatidylethanolamine-forming)","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase activity","type":"related"}],"termid":"GO:0004609","terms_by_termid":{"GO:0004609":null}}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: PBO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSA antisense RNA 1","termid":"PBO:0047304"}


id: MONDO:1012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, cattle","secondary_identifiers":["OMIA:000621-9913"],"termid":"MONDO:1012150","xrefs":{"Monarch":{"xref_id":"1012150"}}}


id: FYPO:0005740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heat. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to heat","synonyms":[{"name":"normal global transcription during vegetative growth in response to heat stress","type":"exact"},{"name":"normal transcription during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to heat stress","type":"exact"}],"termid":"FYPO:0005740"}


id: GO:1901788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoyl-CoA.","definition_xrefs":["GOC:yaf","MetaCyc:P321-PWY","MetaCyc:CENTBENZCOA-PWY","MetaCyc:PWY-1361","UniPathway:UPA00739","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"},{"relation_name":"is_a","term_name":"benzoyl-CoA metabolic process","termid":"GO:1901787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"benzoyl-CoA catabolic process","synonyms":[{"name":"benzoyl-CoA breakdown","type":"exact"},{"name":"benzoyl-CoA catabolism","type":"exact"},{"name":"benzoyl-CoA degradation","type":"exact"}],"termid":"GO:1901788"}


id: PBO:0068450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 24, pseudogene","termid":"PBO:0068450"}


id: PBO:0043355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRN1 antisense RNA 1","termid":"PBO:0043355"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: PBO:0050063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLF transcription factor, PAR bZIP family member","termid":"PBO:0050063"}


id: PBO:0044767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 1","termid":"PBO:0044767"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: PBO:0069765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1048, pseudogene","termid":"PBO:0069765"}


id: PBO:0042397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine and dCMP deaminase domain containing 1","termid":"PBO:0042397"}


id: PBO:0055303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2730","termid":"PBO:0055303"}


id: GO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"}


id: PBO:0054171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1544","termid":"PBO:0054171"}


id: PBO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 11","termid":"PBO:0075155"}


id: GO:0004048
data:
  {"annotated_genes":["SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67114],"is_not":false,"summary":null,"term":"GO:0004048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate.","definition_xrefs":["RHEA:11768","EC:2.4.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"anthranilate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:PRTRANS-RXN","KEGG_REACTION:R01073"],"synonyms":[{"name":"N-(5-phospho-D-ribosyl)-anthranilate:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"PRT","type":"related"},{"name":"anthranilate 5-phosphoribosylpyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"anthranilate phosphoribosylpyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"anthranilate-PP-ribose-P phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl-anthranilate diphosphorylase activity","type":"related"},{"name":"phosphoribosyl-anthranilate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosylanthranilate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosylanthranilate transferase activity","type":"related"}],"termid":"GO:0004048","terms_by_termid":{"GO:0004048":null}}


id: GO:0140685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di- or a monomethyl-lysine residue at position 9 of the histone H3 protein. This is a flavin adenine dinucleotide (FAD)-dependent amine oxidation reaction.","definition_xrefs":["PMID:22473470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0032452","GO:0140096","GO:0016491"],"is_obsolete":false,"name":"FAD-dependent histone H3K9me/H3K9me2 demethylase activity","synonyms":[{"name":"histone H3-di/monomethyl-lysine-9 FAD-dependent demethylase activity","type":"exact"},{"name":"histone H3K9me demethylase activity","type":"broad"},{"name":"histone H3K9me2 demethylase activity","type":"broad"}],"termid":"GO:0140685"}


id: MONDO:0024715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm arising from the synovial membrane. Examples include the diffuse giant cell tumor of tendon sheath and localized giant cell tumor of tendon sheath.","definition_xrefs":["NCIT:C3829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign synovial neoplasm","secondary_identifiers":["MEDGEN:113161","UMLS:C0221289","ICDO:9040/0"],"synonyms":[{"name":"benign neoplasm of synovium","type":"exact"},{"name":"benign neoplasm of the synovium","type":"exact"},{"name":"benign synovial neoplasm","type":"exact"},{"name":"benign synovial tumor","type":"exact"},{"name":"benign synovial tumour","type":"exact"},{"name":"benign synovioma","type":"exact"},{"name":"benign synovium neoplasm","type":"exact"},{"name":"benign tumor of synovium","type":"exact"},{"name":"benign tumor of the synovium","type":"exact"},{"name":"benign tumour of synovium","type":"exact"},{"name":"benign tumour of the synovium","type":"exact"},{"name":"synovioma, benign","type":"exact"},{"name":"synovium neoplasm, benign","type":"exact"}],"termid":"MONDO:0024715","xrefs":{"Monarch":{"xref_id":"0024715"}}}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["UMLS:C1865203","MESH:C566524","MEDGEN:400705","OMIM:602556"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: MONDO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb overgrowth (obsolete MONDO:0017431)","secondary_identifiers":["Orphanet:294953"],"synonyms":[{"name":"limb overgrowth","type":"related"}],"termid":"MONDO:0017431","xrefs":{"Monarch":{"xref_id":"0017431"}}}


id: MONDO:0007114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of acromelic dysplasia characterized by the distinctive radiological sign of angel-shaped middle phalanges, a typical metacarpophalangeal pattern profile (mainly affecting first metacarpals and middle phalanges of second, third and fifth digits, which all appear short), epiphyseal changes in the hips and, in some, abnormal dentition and delayed bone age.","definition_xrefs":["Orphanet:63442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angel-shaped phalango-epiphyseal dysplasia","secondary_identifiers":["OMIM:105835","GARD:671","MESH:C536361","MEDGEN:366028","icd11.foundation:1095628863","MedDRA:10066017","UMLS:C1739384","SCTID:720984008"],"synonyms":[{"name":"ASPED","type":"exact"},{"name":"Angel shaped phalangoepiphyseal dysplasia","type":"related"},{"name":"Angel-shaped phalangoepiphyseal dysplasia","type":"related"}],"termid":"MONDO:0007114","xrefs":{"Monarch":{"xref_id":"0007114"}}}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: GO:1901752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 catabolic process","synonyms":[{"name":"leukotriene A4 breakdown","type":"exact"},{"name":"leukotriene A4 catabolism","type":"exact"},{"name":"leukotriene A4 degradation","type":"exact"}],"termid":"GO:1901752"}


id: SO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a histone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone_binding_site","synonyms":[{"name":"histone binding site","type":"exact"}],"termid":"SO:0001383"}


id: GO:0061772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xenobiotic through the blood-nerve barrier.","definition_xrefs":["GOC:dph","PMID:22733753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"xenobiotic transport across blood-nerve barrier","synonyms":[{"name":"drug transport across blood-nerve barrier","type":"related"},{"name":"drug transport across perineurial barrier","type":"exact"}],"termid":"GO:0061772"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: FYPO:0000491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial genome maintenance does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial genome maintenance","termid":"FYPO:0000490"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial genome maintenance","synonyms":[{"name":"abolished mitochondrial genome maintenance during mitotic cell cycle","type":"related"},{"name":"absent mitochondrial genome maintenance","type":"exact"},{"name":"mitochondrial genome maintenance abolished","type":"exact"},{"name":"mitochondrial genome maintenance abolished during vegetative growth","type":"exact"},{"name":"mitochondrial genome maintenance: absent","type":"related"}],"termid":"FYPO:0000491"}


id: PBO:0004110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1682 family protein","termid":"PBO:0004110"}


id: MONDO:0011797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile-onset ascending hereditary spastic paralysis (IAHSP) is a very rare motor neuron disease characterized by severe spasticity of the lower limbs in early life, progression of spasticity to the upper limbs in late childhood, and dysarthria.","definition_xrefs":["Orphanet:293168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"infantile-onset ascending hereditary spastic paralysis","secondary_identifiers":["OMIM:607225","MESH:C537217","UMLS:C2931441","GARD:4914","ICD9:343.8","MEDGEN:419413","SCTID:703543005"],"synonyms":[{"name":"IAHSP","type":"exact"},{"name":"spastic paralysis, infantile onset ascending","type":"related"},{"name":"spastic paralysis, infantile-onset ascending","type":"related"}],"termid":"MONDO:0011797","xrefs":{"Monarch":{"xref_id":"0011797"}}}


id: MONDO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the spinal cord.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"primary melanoma of the central nervous system","termid":"MONDO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spinal cord melanoma","secondary_identifiers":["NCIT:C5158","UMLS:C1336045","DOID:14151","MEDGEN:236837"],"synonyms":[{"name":"melanoma (disease) of spinal cord","type":"exact"},{"name":"melanoma of spinal cord","type":"exact"},{"name":"melanoma of the spinal cord","type":"exact"},{"name":"spinal cord melanoma","type":"exact"},{"name":"spinal cord melanoma (disease)","type":"exact"}],"termid":"MONDO:0001893","xrefs":{"Monarch":{"xref_id":"0001893"}}}


id: GO:0006565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-serine catabolic process","secondary_identifiers":["MetaCyc:SERDEG-PWY"],"synonyms":[{"name":"L-serine breakdown","type":"exact"},{"name":"L-serine catabolism","type":"exact"},{"name":"L-serine degradation","type":"exact"}],"termid":"GO:0006565"}


id: GO:0032056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation in response to stress","synonyms":[{"name":"activation of translation in response to stress","type":"narrow"},{"name":"stimulation of translation in response to stress","type":"narrow"},{"name":"up regulation of translation in response to stress","type":"exact"},{"name":"up-regulation of translation in response to stress","type":"exact"},{"name":"upregulation of translation in response to stress","type":"exact"}],"termid":"GO:0032056"}


id: GO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052366)","synonyms":[{"name":"catabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052366"}


id: GO:0050114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6/3,5-pentahydroxycyclohexanone = 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H2O.","definition_xrefs":["RHEA:14065","EC:4.2.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"myo-inosose-2 dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02782","MetaCyc:MYO-INOSOSE-2-DEHYDRATASE-RXN"],"synonyms":[{"name":"2,4,6/3,5-pentahydroxycyclohexanone hydro-lyase (3,5/4-trihydroxycyclohexa-1,2-dione-forming)","type":"related"},{"name":"2,4,6/3,5-pentahydroxycyclohexanone hydro-lyase activity","type":"related"},{"name":"inosose 2,3-dehydratase activity","type":"related"},{"name":"ketoinositol dehydratase activity","type":"related"}],"termid":"GO:0050114"}


id: GO:1904406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"negatively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric oxide metabolic process","synonyms":[{"name":"down regulation of nitric oxide metabolic process","type":"exact"},{"name":"down regulation of nitric oxide metabolism","type":"exact"},{"name":"down-regulation of nitric oxide metabolic process","type":"exact"},{"name":"down-regulation of nitric oxide metabolism","type":"exact"},{"name":"downregulation of nitric oxide metabolic process","type":"exact"},{"name":"downregulation of nitric oxide metabolism","type":"exact"},{"name":"inhibition of nitric oxide metabolic process","type":"narrow"},{"name":"inhibition of nitric oxide metabolism","type":"narrow"},{"name":"negative regulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904406"}


id: PBO:0054759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2171","termid":"PBO:0054759"}


id: GO:1903407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:8160880","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"regulation of P-type sodium:potassium-exchanging transporter activity","termid":"GO:1903406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"down regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"down regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"down regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"down regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"down regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down regulation of Na+,K+ pump","type":"related"},{"name":"down regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"down regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"down regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"down regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"down regulation of Na,K-pump","type":"related"},{"name":"down regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"down regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"down regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"down regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"down-regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"down-regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"down-regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"down-regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of Na+,K+ pump","type":"related"},{"name":"down-regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"down-regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"down-regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"down-regulation of Na,K-pump","type":"related"},{"name":"down-regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"down-regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"down-regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"downregulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"downregulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"downregulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"downregulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"downregulation of Na+,K+ pump","type":"related"},{"name":"downregulation of Na+,K+-ATPase activity","type":"exact"},{"name":"downregulation of Na+/K+-ATPase activity","type":"exact"},{"name":"downregulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"downregulation of Na,K-activated ATPase activity","type":"exact"},{"name":"downregulation of Na,K-pump","type":"related"},{"name":"downregulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"downregulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"downregulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"inhibition of (Na+ + K+)-ATPase activity","type":"narrow"},{"name":"inhibition of (Na+ + K+)-activated ATPase activity","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (Na+/K+-exchanging)","type":"narrow"},{"name":"inhibition of Na(+)/K(+)-ATPase activity","type":"narrow"},{"name":"inhibition of Na(+)/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of Na+,K+ pump","type":"related"},{"name":"inhibition of Na+,K+-ATPase activity","type":"narrow"},{"name":"inhibition of Na+/K+-ATPase activity","type":"narrow"},{"name":"inhibition of Na+/K+-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of Na,K-activated ATPase activity","type":"narrow"},{"name":"inhibition of Na,K-pump","type":"related"},{"name":"inhibition of sodium/potassium-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of sodium/potassium-transporting ATPase activity","type":"narrow"},{"name":"inhibition of sodium:potassium exchanging ATPase activity","type":"narrow"},{"name":"inhibition of sodium:potassium-exchanging ATPase activity","type":"narrow"},{"name":"negative regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"negative regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"negative regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"negative regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"negative regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of Na+,K+ pump","type":"related"},{"name":"negative regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"negative regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"negative regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"negative regulation of Na,K-pump","type":"related"},{"name":"negative regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"negative regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"negative regulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903407"}


id: GO:0043920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-aminopropylagmatine + H2O = spermidine + urea.","definition_xrefs":["GOC:jl","RHEA:35827","PMID:15983049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"aminopropylagmatine ureohydrolase activity","secondary_identifiers":["EC:3.5.3.24"],"termid":"GO:0043920"}


id: PBO:0090571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4","termid":"PBO:0090571"}


id: FYPO:0007005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of DNA recombination downstream of replication fork barriers is decreased.","definition_xrefs":["PomBase:mah","PMID:30667359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers","synonyms":[{"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination downstream of mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"decreased recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"decreased template switching recombination downstream of mitotic DNA replication fork barriers","type":"exact"},{"name":"reduced DNA recombination downstream of mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0007005"}


id: GO:0035884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["ISBN:0198506732","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan biosynthetic process","termid":"GO:0035884"}


id: GO:0060359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23509267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ammonium ion","secondary_identifiers":["GO:1903717"],"synonyms":[{"name":"response to ammonia","type":"exact"}],"termid":"GO:0060359"}


id: PBO:0054496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1896","termid":"PBO:0054496"}


id: GO:0034722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a gamma-linked glutamate bond.","definition_xrefs":["EC:3.4.19.9","MEROPS_fam:C26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"gamma-glutamyl-peptidase activity","synonyms":[{"name":"gamma-glutamyl hydrolase activity","type":"related"}],"termid":"GO:0034722"}


id: PBO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030924"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-modulated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0001217","GO:0003700","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"ligand-modulated transcription repressor activity","synonyms":[{"name":"ligand-activated transcription repressor activity","type":"narrow"}],"termid":"GO:0141096"}


id: MONDO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 47, and lissencephaly","secondary_identifiers":["MEDGEN:1794161","OMIM:619466","UMLS:C5561951"],"synonyms":[{"name":"CILD47","type":"exact"},{"name":"ciliary dyskinesia, primary, 47, and lissencephaly","type":"exact"}],"termid":"MONDO:0030346","xrefs":{"Monarch":{"xref_id":"0030346"}}}


id: MONDO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 6","secondary_identifiers":["GARD:12155","OMIM:613882","UMLS:C3151295","MEDGEN:462645","DOID:0060884"],"synonyms":[{"name":"HOMG6","type":"exact"},{"name":"hypomagnesemia 6, renal","type":"related"},{"name":"renal hypomagnesemia type 6","type":"exact"},{"name":"renal hypomagnesemia-6","type":"related"}],"termid":"MONDO:0013480","xrefs":{"Monarch":{"xref_id":"0013480"}}}


id: PBO:0075917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 9","termid":"PBO:0075917"}


id: PBO:0038547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 1","termid":"PBO:0038547"}


id: PBO:0065254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20G","termid":"PBO:0065254"}


id: GO:0070267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in swelling of the cell body, and that is morphologically characteristic of necrotic cell death.","definition_xrefs":["PMID:18846107","PMID:17873035"],"gene_count":0,"genotype_count":0,"name":"obsolete oncosis (obsolete GO:0070267)","termid":"GO:0070267"}


id: GO:0072364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072364)","synonyms":[{"name":"regulation of cellular ketone metabolic process by regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072364"}


id: GO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conservative import of proteins into the mitochondrial intermembrane space. The entire protein enters the matrix, and then the second targeting sequence directs the protein, presumably bound to a matrix protein, across the inner membrane to the intermembrane space.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into mitochondrial intermembrane space, conservative (obsolete GO:0045042)","synonyms":[{"name":"conservative mitochondrial IMS protein import","type":"exact"},{"name":"conservative mitochondrial intermembrane space protein import","type":"exact"},{"name":"conservative protein transport into mitochondrial IMS","type":"exact"},{"name":"conservative protein transport into mitochondrial intermembrane space","type":"exact"},{"name":"protein import into mitochondrial IMS, conservative","type":"exact"},{"name":"protein import into mitochondrial intermembrane space, conservative","type":"exact"},{"name":"protein transport into mitochondrial IMS, conservative","type":"exact"},{"name":"protein transport into mitochondrial intermembrane space, conservative","type":"exact"}],"termid":"GO:0045042"}


id: PBO:0077825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3D","termid":"PBO:0077825"}


id: GO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoterpenoid catabolic process","synonyms":[{"name":"monoterpenoid breakdown","type":"exact"},{"name":"monoterpenoid catabolism","type":"exact"},{"name":"monoterpenoid degradation","type":"exact"}],"termid":"GO:0016100"}


id: PBO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10 (predicted)","termid":"PBO:0011968"}


id: GO:1901858
data:
  {"annotated_genes":["SJAG_03957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090297"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23150719","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"regulation of mtDNA metabolic process","type":"exact"},{"name":"regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901858","terms_by_termid":{"GO:0090297":null}}


id: PR:Q9UUA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase PIF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23274:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.14c","secondary_identifiers":["UniProtKB:Q9UUA2"],"synonyms":[{"name":"DNA repair and recombination helicase pfh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIF1 helicase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRM3/PIF1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.14c","type":"related"},{"name":"Spom972h-PIF1","type":"exact"},{"name":"pif1","type":"related"},{"name":"rph1","type":"related"}],"termid":"PR:Q9UUA2"}


id: GO:1901566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organonitrogen compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organonitrogen compound biosynthetic process (obsolete GO:1901566)","termid":"GO:1901566"}


id: PBO:0075468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 19","termid":"PBO:0075468"}


id: GO:0019746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"hopanoid metabolic process","termid":"GO:0019744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"hopanoid biosynthetic process","synonyms":[{"name":"hopanoid anabolism","type":"exact"},{"name":"hopanoid biosynthesis","type":"exact"},{"name":"hopanoid formation","type":"exact"},{"name":"hopanoid synthesis","type":"exact"}],"termid":"GO:0019746"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


