# terms

id: PBO:0083024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; originally included in genome annotation, but later deleted due to sequence correction","termid":"PBO:0083024"}


id: PR:O13944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxysterol-binding protein-related protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C23H4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.01c","secondary_identifiers":["UniProtKB:O13944"],"synonyms":[{"name":"Spom972h-OSBPL11","type":"exact"}],"termid":"PR:O13944"}


id: PBO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 8","termid":"PBO:0052142"}


id: GO:0097512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:cjm","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cardiac myofibril","termid":"GO:0097512"}


id: GO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to benomyl (obsolete GO:0072755)","termid":"GO:0072755"}


id: MONDO:0011868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 2 is a rare arthrogryposis syndrome characterized by multiple congenital contactures (typically extended elbows and flexed knees), micrognathia, anterior horn cell degeneration, skeletal muscle atrophy (mainly in the lower limbs), presence of a markedly distended urinary bladder and absence of hydrops, pterygia and bone fractures. Other craniofacial (e.g. cleft palate, facial palsy) and ocular (e.g. anisocoria, retinal detachment) anomalies may be additionally observed. The disease is usually neonatally lethal however, survival into adolescence has been reported.","definition_xrefs":["Orphanet:137776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 2","secondary_identifiers":["MEDGEN:334413","UMLS:C1843478","GARD:9177","SCTID:715419004","MESH:C564369","OMIM:607598","DOID:0060560"],"synonyms":[{"name":"ERBB3 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS2","type":"exact"},{"name":"lethal congenital contractural syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ERBB3","type":"exact"},{"name":"lethal congenital contracture syndrome type 2","type":"exact"},{"name":"multiple contracture syndrome, Israeli Bedouin type","type":"related"},{"name":"multiple contracture syndrome, Israeli Bedouin type a","type":"related"},{"name":"multiple contracture syndrome, Israeli-Bedouin type","type":"exact"}],"termid":"MONDO:0011868","xrefs":{"Monarch":{"xref_id":"0011868"}}}


id: GO:1901893
data:
  {"annotated_genes":["SJAG_03704","SJAG_01805","SJAG_00082","SJAG_03631","SJAG_03342","SJAG_01188","SJAG_04776","SJAG_05290","SJAG_03936","SJAG_03048","SJAG_04468","SJAG_01114","SJAG_00514","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115074,117502,93281,105938,106598,79718,89333,91893,104726,112954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[89466,86980,93285,110100,101913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell septum assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell septum assembly","termid":"GO:1901891"},{"relation_name":"positively_regulates","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell septum assembly","type":"narrow"},{"name":"up regulation of cell septum assembly","type":"exact"},{"name":"up-regulation of cell septum assembly","type":"exact"},{"name":"upregulation of cell septum assembly","type":"exact"}],"termid":"GO:1901893","terms_by_termid":{"GO:0031031":null,"GO:0140281":null}}


id: FYPO:0004015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of mitochondria.","definition_xrefs":["PomBase:mah","PMID:2065367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in normal numbers","synonyms":[{"name":"mitochondria present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"mitochondria present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004015"}


id: PBO:0083588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YGR051C is not an essential gene","termid":"PBO:0083588"}


id: GO:0106407
data:
  {"annotated_genes":["SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86824],"is_not":false,"summary":null,"term":"GO:0106407"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Glc(2)Man(9)GlcNAc(2)-[protein] + H2O = GlcMan(9)GlcNAc(2)-[protein] + beta-D-glucopyranose.","definition_xrefs":["EC:3.2.1.207","PMID:30389790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"Glc2Man9GlcNAc2 oligosaccharide glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucosidase II","type":"broad"}],"termid":"GO:0106407","terms_by_termid":{"GO:0106407":null}}


id: GO:1901264
data:
  {"annotated_genes":["SJAG_01960","SJAG_04406","SJAG_04162","SJAG_00434","SJAG_03334","SJAG_01177","SJAG_00612","SJAG_03774","SJAG_00339","SJAG_02897","SJAG_00276","SJAG_02050","SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[92812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[93904,78828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[100885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[100886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[59112,102384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[111845,92584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[76618,87823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[77768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[111961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[79359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[67583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02897":null,"SJAG_03334":null,"SJAG_03774":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901264","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0034203":null,"GO:0035436":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0039032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 9","termid":"PBO:0039032"}


id: FYPO:0001484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chemical response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to a nutrient is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to nutrient","synonyms":[{"name":"abnormal cellular response to nutrient during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to nutrient during vegetative growth","type":"exact"}],"termid":"FYPO:0001484"}


id: MONDO:1012726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in horses due to a mutation in the LAMC2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMC2-related, horse","secondary_identifiers":["OMIA:001678-9796"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMC2-related, horse","type":"exact"}],"termid":"MONDO:1012726","xrefs":{"Monarch":{"xref_id":"1012726"}}}


id: FYPO:0001822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which one or more of the mating cassettes is duplicated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"mating cassette duplication","termid":"FYPO:0001822"}


id: PBO:0047700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formation of mitochondrial complex V assembly factor 1 homolog","termid":"PBO:0047700"}


id: GO:0106229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutaryl-CoA + histone = CoA + H+ + N6-glutaryl-histone.","definition_xrefs":["PMID:31542297","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide glutaryltransferase activity","termid":"GO:0106228"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone glutaryltransferase activity","termid":"GO:0106229"}


id: PBO:0077171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 2","termid":"PBO:0077171"}


id: PBO:0067088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 124, pseudogene","termid":"PBO:0067088"}


id: FYPO:0004629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic DNA replication","synonyms":[{"name":"normal DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0004629"}


id: PBO:0080303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 67 pseudogene","termid":"PBO:0080303"}


id: GO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 56 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 deacetylation (obsolete GO:0071572)","termid":"GO:0071572"}


id: FYPO:0005220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is abnormal.","definition_xrefs":["GO:0051259","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein oligomerization","synonyms":[{"name":"abnormal protein oligomerisation","type":"exact"},{"name":"abnormal protein oligomerization during mitotic cell cycle","type":"related"},{"name":"abnormal protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005220"}


id: MONDO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.","definition_xrefs":["NCIT:C4033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"clear cell renal carcinoma","secondary_identifiers":["GARD:9574","ONCOTREE:CCRCC","ICD9:189.0","SCTID:254915003","DOID:4467","Orphanet:319276","UMLS:C0279702","EFO:0000349","MEDGEN:76018"],"synonyms":[{"name":"Grawitz tumor","type":"exact"},{"name":"Grawitz tumour","type":"exact"},{"name":"RCC, clear cell adenocarcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of kidney","type":"exact"},{"name":"clear cell adenocarcinoma of the kidney","type":"exact"},{"name":"clear cell adenocarcinoma, kidney","type":"exact"},{"name":"clear cell carcinoma of kidney","type":"exact"},{"name":"clear cell carcinoma of the kidney","type":"exact"},{"name":"clear cell kidney carcinoma","type":"exact"},{"name":"clear cell renal cell cancer","type":"exact"},{"name":"clear cell renal cell carcinoma","type":"exact"},{"name":"clear-cell metastatic renal cell carcinoma","type":"related"},{"name":"conventional (clear cell) renal cell adenocarcinoma","type":"exact"},{"name":"conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"conventional renal cell carcinoma","type":"exact"},{"name":"hypernephroma","type":"related"},{"name":"kidney clear cell adenocarcinoma","type":"exact"},{"name":"kidney clear cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell carcinoma","type":"exact"}],"termid":"MONDO:0005005","xrefs":{"Monarch":{"xref_id":"0005005"}}}


id: PBO:0076253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2B","termid":"PBO:0076253"}


id: PBO:0048757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ganglioside GM2 activator","termid":"PBO:0048757"}


id: MONDO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylation, slow","secondary_identifiers":["OMIM:243400","UMLS:C0878587","MEDGEN:164207"],"synonyms":[{"name":"Fast acetylator phenotype","type":"related"},{"name":"INH inactivation, Fast","type":"related"},{"name":"INH inactivation, slow","type":"related"},{"name":"Isoniazid inactivation, slow","type":"related"},{"name":"acetylation, Fast","type":"related"},{"name":"acetylation, slow","type":"exact"},{"name":"slow acetylator phenotype","type":"related"}],"termid":"MONDO:0009472","xrefs":{"Monarch":{"xref_id":"0009472"}}}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: MONDO:0044792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large, or giant, congenital melanocytic nevus (LCMN or GCMN) is a pigmented skin lesion of more than 20 cm - or 40 cm- respectively, projected adult diameter, composed of melanocytes, and presenting with an elevated risk of malignant transformation.","definition_xrefs":["Orphanet:626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large congenital melanocytic nevus","secondary_identifiers":["MEDGEN:330752","DOID:0111359","GARD:2469","NCIT:C4234","NORD:1184","SCTID:254815002","SCTID:398696001","NCIT:C3944","UMLS:C1842036","ICDO:8761/1","icd11.foundation:618273329","OMIM:137550","ONCOTREE:SKCN","MedDRA:10072036"],"synonyms":[{"name":"CMNS","type":"related"},{"name":"GMN","type":"exact"},{"name":"GPHN","type":"related"},{"name":"Giant Congenital Melanocytic Nevus","type":"exact"},{"name":"LCMN","type":"exact"},{"name":"bathing trunk nevus","type":"exact"},{"name":"congenital giant pigmented nevus","type":"related"},{"name":"congenital hairy nevus","type":"related"},{"name":"congenital melanocytic nevi","type":"exact"},{"name":"congenital melanocytic nevus","type":"exact"},{"name":"congenital melanocytic nevus of skin","type":"exact"},{"name":"congenital melanocytic nevus of the skin","type":"exact"},{"name":"congenital nevus","type":"related"},{"name":"congenital nevus of skin","type":"exact"},{"name":"congenital nevus of the skin","type":"exact"},{"name":"congenital pigmented melanocytic Nevus","type":"exact"},{"name":"congenital pigmented nevus","type":"exact"},{"name":"congenital pigmented nevus of skin","type":"exact"},{"name":"congenital pigmented nevus of the skin","type":"exact"},{"name":"congenital pigmented skin nevus","type":"exact"},{"name":"congenital skin nevus","type":"exact"},{"name":"giant congenital melanocytic nevus","type":"related"},{"name":"giant congenital nevus","type":"exact"},{"name":"giant congenital pigmented Nevus","type":"related"},{"name":"giant hairy nevus","type":"related"},{"name":"giant pigmented hairy nevus","type":"exact"},{"name":"giant pigmented nevus","type":"related"},{"name":"giant pigmented nevus of skin","type":"exact"},{"name":"giant pigmented nevus of the skin","type":"exact"},{"name":"large congenital melanocytic nevus","type":"exact"},{"name":"melanocytic nevus syndrome, congenital","type":"related"},{"name":"melanocytic nevus syndrome, congenital, somatic","type":"exact"},{"name":"nevus spilus","type":"related"},{"name":"pigmented moles","type":"related"},{"name":"spitz nevus","type":"related"},{"name":"spitz nevus or nevus spilus, somatic","type":"exact"}],"termid":"MONDO:0044792","xrefs":{"Monarch":{"xref_id":"0044792"}}}


id: GO:1990655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 4 iron, 3 sulfur (4Fe-3S) cluster, an uncommon iron-sulfur cluster with unique properties found in oxygen-tolerant Ni-Fe hydrogenases of various bacteria.","definition_xrefs":["GOC:am","PMID:23267108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"4 iron, 3 sulfur cluster binding","synonyms":[{"name":"4Fe-3S cluster binding","type":"related"}],"termid":"GO:1990655"}


id: GO:1905837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["PMID:28078994","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triterpenoid","termid":"GO:1905837"}


id: GO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + glutathione S-conjugate(in) -> ADP + phosphate + glutathione S-conjugate(out).","definition_xrefs":["RHEA:19121","GOC:jl","PMID:1455517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type glutathione S-conjugate transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-358","EC:7.6.2.3","GO:0071997"],"synonyms":[{"name":"ATP-dependent glutathione S-conjugate export pump","type":"exact"},{"name":"ATPase-coupled glutathione S-conjugate transmembrane transporter activity","type":"related"},{"name":"GS-X pump","type":"exact"},{"name":"MRP1/GS-X pump","type":"exact"},{"name":"conjugate transporter activity","type":"broad"},{"name":"glutathione S-conjugate-exporting ATPase activity","type":"narrow"},{"name":"glutathione S-conjugate-transporting ATPase activity","type":"related"}],"termid":"GO:0015431"}


id: GO:0061977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of hip joint articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articular cartilage development","termid":"GO:0061975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hip joint articular cartilage development","termid":"GO:0061977"}


id: PBO:0116980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGL1 antisense RNA 1","termid":"PBO:0116980"}


id: PBO:0029122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased","termid":"PBO:0029122"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: GO:0033872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-(heparan sulfate)(n) = 3-sulfo-alpha-D-glucosaminyl-(heparan sulfate)(n) + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["EC:2.8.2.30"],"gene_count":0,"genotype_count":0,"name":"obsolete heparan sulfate 3-sulfotransferase 3 activity (obsolete GO:0033872)","synonyms":[{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 3 activity","type":"exact"},{"name":"heparin-glucosamine 3-sulfotransferase 3 activity","type":"related"}],"termid":"GO:0033872"}


id: SO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by DNA modifications, resulting in repression of transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_DNA_modification","synonyms":[{"name":"silenced by DNA modification","type":"exact"}],"termid":"SO:0000894"}


id: MONDO:0008398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salivary substance, Clostridium botulinum type","secondary_identifiers":["MEDGEN:356679","UMLS:C1867056","OMIM:180950"],"synonyms":[{"name":"salivary substance, Clostridium botulinum type","type":"exact"}],"termid":"MONDO:0008398","xrefs":{"Monarch":{"xref_id":"0008398"}}}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: PBO:0056346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 4","termid":"PBO:0056346"}


id: GO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde catabolic process","synonyms":[{"name":"acetaldehyde breakdown","type":"exact"},{"name":"acetaldehyde catabolism","type":"exact"},{"name":"acetaldehyde degradation","type":"exact"}],"termid":"GO:0046187"}


id: PBO:0062708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 2","termid":"PBO:0062708"}


id: GO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link through a process of forming first an intermediate cysteine sulfenic acid by peroxide oxidation, followed by condensation with the alpha-amido of the following serine residue and the release of water.","definition_xrefs":["GOC:jid","PMID:12802338","RESID:AA0344","PMID:12802339"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine (obsolete GO:0048109)","termid":"GO:0048109"}


id: PBO:0077022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4 pseudogene 1","termid":"PBO:0077022"}


id: MONDO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the recurrent failure to resist the impulse to steal items of little intrinsic value; the individual experiences a rising subjective sense of tension before the theft and a sense of gratification or relief during the theft.","definition_xrefs":["NCIT:C94333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptomania","secondary_identifiers":["SCTID:69361009","ICD9:312.32","icd11.foundation:804604349","MEDGEN:5974","DOID:12400","UMLS:C0022734","ICD10CM:F63.2"],"synonyms":[{"name":"kleptomania","type":"exact"},{"name":"pathological stealing","type":"exact"}],"termid":"MONDO:0001520","xrefs":{"Monarch":{"xref_id":"0001520"}}}


id: MONDO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm in which there is infiltration of the skin overlying the breast by neoplastic large cells with abundant pale cytoplasm and large nuclei with prominent nucleoli (Paget cells). It is almost always associated with an intraductal or invasive ductal carcinoma of the breast. The clinical features include focal skin reddening, and eczema. Retraction of the nipple may sometimes occur.","definition_xrefs":["NCIT:C47857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"Paget disease","termid":"MONDO:0021165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mammary Paget disease","secondary_identifiers":["DOID:3443","MESH:D010144","MEDGEN:18263","UMLS:C0030185","ICDO:8540/3"],"synonyms":[{"name":"Paget cell neoplasm","type":"exact"},{"name":"Paget disease of the breast","type":"exact"},{"name":"Paget's disease of breast","type":"exact"},{"name":"Paget's disease of the breast","type":"exact"},{"name":"breast Paget disease","type":"exact"},{"name":"mammary Paget disease","type":"exact"},{"name":"mammary Paget's disease","type":"exact"}],"termid":"MONDO:0002648","xrefs":{"Monarch":{"xref_id":"0002648"}}}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["DOID:1725","ICD9:158.8","NCIT:C3538","MEDGEN:102270","SCTID:363492001","UMLS:C0153467","ICD9:158.9","ICD9:159.8"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: PBO:0062114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 13","termid":"PBO:0062114"}


id: MONDO:0022712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculo digital syndrome","secondary_identifiers":["UMLS:C2931063","MESH:C535922","MEDGEN:419324"],"synonyms":[{"name":"Chemke Oliver Mallek syndrome","type":"related"},{"name":"Chemke-Oliver-Mallek syndrome","type":"related"},{"name":"multiple ophthalmic anomalies and digital hypoplasia","type":"related"}],"termid":"MONDO:0022712","xrefs":{"Monarch":{"xref_id":"0022712"}}}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:20693317","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: GO:0009964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"negatively_regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flavonoid biosynthetic process","synonyms":[{"name":"down regulation of flavonoid biosynthetic process","type":"exact"},{"name":"down-regulation of flavonoid biosynthetic process","type":"exact"},{"name":"downregulation of flavonoid biosynthetic process","type":"exact"},{"name":"inhibition of flavonoid biosynthetic process","type":"narrow"},{"name":"negative regulation of flavonoid anabolism","type":"exact"},{"name":"negative regulation of flavonoid biosynthesis","type":"exact"},{"name":"negative regulation of flavonoid formation","type":"exact"},{"name":"negative regulation of flavonoid synthesis","type":"exact"}],"termid":"GO:0009964"}


id: PBO:0069043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 288, pseudogene","termid":"PBO:0069043"}


id: GO:0015733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which shikimate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"shikimate transmembrane transport","synonyms":[{"name":"shikimate transport","type":"related"}],"termid":"GO:0015733"}


id: PBO:0066428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats pseudogene 3","termid":"PBO:0066428"}


id: PBO:0053618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 659","termid":"PBO:0053618"}


id: PR:O42666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.12c","synonyms":[{"name":"Spom972h-but1","type":"exact"},{"name":"meiotically up-regulated gene 107 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42666"}


id: MONDO:0013842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased activity of the enzyme 11-beta-hydroxysteroid dehydrogenase type 1 due to inactivating mutation(s) in the HSD11B1 gene. The condition is characterized by hyperandrogenism as a result of increased adrenocorticotropic hormone stimulation of the adrenal gland due to failure of cortisol-mediated down-regulation, and is clinically indistinguishable from H6PD deficiency.","definition_xrefs":["NCIT:C131084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortisone reductase deficiency","termid":"MONDO:0000193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cortisone reductase deficiency 2","secondary_identifiers":["DOID:0090140","UMLS:C3553382","MEDGEN:766296","GARD:15830","OMIM:614662"],"synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase type 1 deficiency","type":"exact"},{"name":"CORTRD2","type":"exact"},{"name":"HSD11B1 cortisone reductase deficiency","type":"exact"},{"name":"cortisone reductase deficiency 2","type":"exact"},{"name":"cortisone reductase deficiency caused by mutation in HSD11B1","type":"exact"},{"name":"cortisone reductase deficiency type 2","type":"exact"}],"termid":"MONDO:0013842","xrefs":{"Monarch":{"xref_id":"0013842"}}}


id: MONDO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection caused by the hepatitis B virus.","definition_xrefs":["NCIT:C3097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"Hepadnaviridae infectious disease","termid":"MONDO:0005786"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis B virus infection","secondary_identifiers":["MEDGEN:6807","ICD9:070.30","DOID:2043","EFO:0004197","MESH:D006509","SCTID:66071002","UMLS:C0019163"],"synonyms":[{"name":"Hepatitis B","type":"exact"},{"name":"Hepatitis B infection","type":"exact"},{"name":"Hepatitis B virus caused hepatitis","type":"exact"},{"name":"Hepatitis B virus hepatitis","type":"exact"},{"name":"chronic hepatitis B","type":"narrow"},{"name":"hepatitis B infection","type":"exact"},{"name":"hepatitis type B","type":"exact"},{"name":"serum hepatitis","type":"related"},{"name":"viral Hepatitis B","type":"exact"}],"termid":"MONDO:0005344","xrefs":{"Monarch":{"xref_id":"0005344"}}}


id: PATO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence in which the emittence continues after the absorption has ceased.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorescence","termid":"PATO:0001298"}


id: PBO:0061980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 1 pseudogene","termid":"PBO:0061980"}


id: PBO:0083534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TSR2/YLR435W","termid":"PBO:0083534"}


id: MONDO:0010148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mounier-Kuhn syndrome, also known as idiopathic tracheobronchomegaly, is a congenital disorder characterized by marked dilatation of the trachea and proximal bronchi that leads to impaired airway secretion clearance and recurrent lower respiratory tract infections.","definition_xrefs":["Orphanet:3347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mounier-Kuhn syndrome","secondary_identifiers":["SCTID:57451009","NCIT:C85196","UMLS:C0040587","MedDRA:10044316","GARD:3793","MEDGEN:11871","MESH:D014137","OMIM:275300","ICD9:748.3"],"synonyms":[{"name":"Mounier-Kühn syndrome","type":"related"},{"name":"Mounier Kuhn syndrome","type":"related"},{"name":"Mounier-Kuhn syndrome","type":"exact"},{"name":"congenital tracheobronchomegaly","type":"exact"},{"name":"idiopathic tracheobronchomegaly","type":"exact"},{"name":"tracheobronchomegaly","type":"exact"}],"termid":"MONDO:0010148","xrefs":{"Monarch":{"xref_id":"0010148"}}}


id: MONDO:0007383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stern-Lubinsky-Durrie syndrome is characterized by corneal epithelial changes (associated with photophobia and burning and watering of the eyes), diffuse palmoplantar hyperkeratosis, distal onycholysis, brachydactyly, short stature, dental problems, and premature birth. It has been described in seven individuals from three generations of one family. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:3194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stern-Lubinsky-Durrie syndrome","secondary_identifiers":["MESH:C537488","SCTID:723584003","UMLS:C1852542","MEDGEN:342260","OMIM:122440","GARD:1531","icd11.foundation:1754695879"],"synonyms":[{"name":"CORNEODERMATOOSSEOUS syndrome","type":"related"},{"name":"Cdo syndrome","type":"related"},{"name":"Stern Lubinsky Durrie syndrome","type":"related"},{"name":"corneal dystrophy epithelial and short stature","type":"related"},{"name":"corneal dystrophy, epithelial, with skin and skeletal changes","type":"related"},{"name":"corneo-dermato-osseous syndrome","type":"exact"}],"termid":"MONDO:0007383","xrefs":{"Monarch":{"xref_id":"0007383"}}}


id: PBO:0059996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 16","termid":"PBO:0059996"}


id: MONDO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","secondary_identifiers":["Orphanet:93447"],"synonyms":[{"name":"primary osteodysplasia with defective bone mineralization","type":"exact"},{"name":"primary skeletal dysplasia with defective bone mineralization","type":"exact"}],"termid":"MONDO:0019705","xrefs":{"Monarch":{"xref_id":"0019705"}}}


id: GO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"positively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric cell division","synonyms":[{"name":"activation of asymmetric cell division","type":"narrow"},{"name":"stimulation of asymmetric cell division","type":"narrow"},{"name":"up regulation of asymmetric cell division","type":"exact"},{"name":"up-regulation of asymmetric cell division","type":"exact"},{"name":"upregulation of asymmetric cell division","type":"exact"}],"termid":"GO:0045770"}


id: PATO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elevation","synonyms":[{"name":"elevated","type":"related"},{"name":"high elevation","type":"exact"}],"termid":"PATO:0001688"}


id: MONDO:0006961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fatal disease of the nervous system in sheep and goats, characterized by pruritus, debility, and locomotor incoordination. It is caused by proteinaceous infectious particles called prions.","definition_xrefs":["MESH:D012608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrapie","secondary_identifiers":["DOID:5434","MEDGEN:19903","UMLS:C0036457","EFO:1001168"],"termid":"MONDO:0006961","xrefs":{"Monarch":{"xref_id":"0006961"}}}


id: GO:1990079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within cartilage, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:hjd","PMID:21652695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage homeostasis","secondary_identifiers":["GO:1902096","GO:1902094","GO:1902095"],"synonyms":[{"name":"negative regulation of cartilage homeostasis","type":"related"},{"name":"positive regulation of cartilage homeostasis","type":"related"},{"name":"regulation of cartilage homeostasis","type":"related"}],"termid":"GO:1990079"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: PBO:0086544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR029W is not an essential gene","termid":"PBO:0086544"}


id: GO:2000817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of histone H3-T3 phosphorylation that is involved in chromosome passenger complex localization to kinetochore.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore (obsolete GO:2000817)","synonyms":[{"name":"regulation of histone H3-T3 phosphorylation involved in CPC complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in CPC localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"regulation of histone H3-T3 phosphorylation involved in chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:2000817"}


id: GO:0140217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"positively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of D-aspartate import across plasma membrane","termid":"GO:0140217"}


id: PR:O60062
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.11","synonyms":[{"name":"Spom972h-met6","type":"exact"},{"name":"homoserine O-trans-acetylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60062"}


id: GO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the hexose monosaccharide glucose into a cell as a result of an insulin stimulus.","definition_xrefs":["GOC:BHF","PMID:19079291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose import","termid":"GO:0046323"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"glucose import in response to insulin stimulus","synonyms":[{"name":"cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:0044381"}


id: GO:0034997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises one integrin alphav subunit, one integrin beta5 subunit, and vitronectin.","definition_xrefs":["PMID:1694173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphav-beta5 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB5-VTN complex","type":"narrow"}],"termid":"GO:0034997"}


id: PBO:0029556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_polynucleotide_3'-phosphatase_activity","termid":"PBO:0029556"}


id: PR:P08096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- top2 gene.","definition_xrefs":["UniProtKB:P08096","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.03c","synonyms":[{"name":"DNA topoisomerase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-top2","type":"exact"}],"termid":"PR:P08096"}


id: GO:0061277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric nephron tubule from unspecified parts. A mesonephric nephron tubule is an epithelial tube that is part of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule formation","termid":"GO:0061277"}


id: GO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trichoblast cell to attain its fully functional state.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast maturation","termid":"GO:0048764"}


id: PBO:0079147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 9","termid":"PBO:0079147"}


id: GO:0031648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein destabilization","synonyms":[{"name":"negative regulation of protein stability","type":"exact"},{"name":"protein destabilisation","type":"exact"}],"termid":"GO:0031648"}


id: FYPO:0008027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is increased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"increased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008027"}


id: PBO:0081610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 534","termid":"PBO:0081610"}


id: FYPO:0006650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATP-dependent protein-DNA complex displacement activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal ATP-dependent protein-DNA complex displacement activity","termid":"FYPO:0006650"}


id: PBO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor Of Cdc2","termid":"PBO:0004060"}


id: PBO:0053432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 377","termid":"PBO:0053432"}


id: GO:0097351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxin to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:21819231","PMID:19143615","GOC:rs","PMID:19325885","PMID:22545240","PMID:24806488","Wikipedia:Toxin-antitoxin_system#Type_II"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"toxin sequestering activity","synonyms":[{"name":"toxin-antitoxin pair type I binding","type":"narrow"},{"name":"toxin-antitoxin pair type II binding","type":"narrow"}],"termid":"GO:0097351"}


id: PBO:0068782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 19, pseudogene","termid":"PBO:0068782"}


id: GO:2000500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000500)","synonyms":[{"name":"positive regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"positive regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000500"}


id: PBO:0085761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of the bud neck involved in the septin checkpoint; associates with septin proteins, negatively regulates Swe1p by phosphorylation, shows structural homology to bud neck kinases Gin4p and Hsl1p; KCC4 has a paralog, GIN4, that arose from the whole genome duplication","termid":"PBO:0085761"}


id: PBO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111A divergent transcript","termid":"PBO:0047051"}


id: GO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: MOD:01189
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12766232","Unimod:212#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d5","termid":"MOD:00562"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d5 - site C","synonyms":[{"name":"N-ethyl iodoacetamide-d5","type":"related"},{"name":"NEIAA:2H(5)","type":"related"}],"termid":"MOD:01189"}


id: PBO:0024860
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex binds a 3' single-stranded DNA overhang and translocates along an DNA/RNA duplex in the 3' to 5' direction","termid":"PBO:0024860"}


id: GO:0018758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine + H2O = CH3CH2NH2 + cyanuric acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine aminohydrolase activity (obsolete GO:0018758)","termid":"GO:0018758"}


id: PBO:0057489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 607","termid":"PBO:0057489"}


id: GO:1900343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"down regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"down-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"downregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"inhibition of methane biosynthetic process from dimethyl sulfide","type":"narrow"}],"termid":"GO:1900343"}


id: PBO:0056254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis associated long intergenic non-coding RNA 1","termid":"PBO:0056254"}


id: PBO:0041448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 152","termid":"PBO:0041448"}


id: MONDO:0006702
data:
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id: FYPO:0003096
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id: PBO:0029761
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id: FYPO:0008103
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id: GO:0051419
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id: PBO:0086409
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id: GO:0140097
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id: GO:0141175
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id: MONDO:0010785
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id: GO:1901758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butirosin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00964","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"butirosin metabolic process","termid":"GO:1901756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butirosin biosynthetic process","synonyms":[{"name":"butirosin anabolism","type":"exact"},{"name":"butirosin biosynthesis","type":"exact"},{"name":"butirosin formation","type":"exact"},{"name":"butirosin synthesis","type":"exact"}],"termid":"GO:1901758"}


id: PBO:0013020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad52 (previously Rad22)","termid":"PBO:0013020"}


id: GO:0030295
data:
  {"annotated_genes":["SJAG_00236","SJAG_01213","SJAG_01401","SJAG_03936","SJAG_05017","SJAG_04666","SJAG_00457","SJAG_04140","SJAG_04614","SJAG_03453","SJAG_03618","SJAG_00333","SJAG_04020","SJAG_03090","SJAG_02026","SJAG_02057","SJAG_02332","SJAG_00424","SJAG_04509","SJAG_02232","SJAG_01605","SJAG_02785","SJAG_03695","SJAG_01411","SJAG_00439","SJAG_03340","SJAG_04502","SJAG_04200","SJAG_00318","SJAG_03371","SJAG_03699","SJAG_02605","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71908,72216,74039,74680,80219,88682,90782,98702,106697,111019,112071,115923],"is_not":false,"summary":null,"term":"GO:0030295"},{"annotations":[67346,112557,81604,101151,72020,75834,110786,116684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[104671,88905,77226,70565,87356,91906,108842,110122,117998,90324,90660,77231,88697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"protein kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030295","terms_by_termid":{"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0097187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of dentin, the mineralized tissue that constitutes the major bulk of teeth. Dentin may be one of three types: primary dentin, secondary dentin, and tertiary dentin.","definition_xrefs":["GOC:sl","GOC:cjm","PMID:21196346","PMID:10206335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentinogenesis","synonyms":[{"name":"dentin development","type":"exact"},{"name":"dentine development","type":"exact"}],"termid":"GO:0097187"}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: MONDO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the subglottic area of the larynx.","definition_xrefs":["NCIT:C4426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal neoplasm","termid":"MONDO:0021071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subglottis neoplasm","secondary_identifiers":["SCTID:126696001","DOID:10069","UMLS:C0345746","MEDGEN:87513"],"synonyms":[{"name":"neoplasm of subglottis","type":"exact"},{"name":"neoplasm of the subglottis","type":"exact"},{"name":"subglottic neoplasm","type":"exact"},{"name":"subglottic tumor","type":"exact"},{"name":"subglottic tumour","type":"exact"},{"name":"subglottis neoplasm","type":"exact"},{"name":"subglottis neoplasm (disease)","type":"exact"},{"name":"subglottis tumor","type":"exact"},{"name":"subglottis tumour","type":"exact"},{"name":"tumor of subglottis","type":"exact"},{"name":"tumor of the subglottis","type":"exact"},{"name":"tumour of subglottis","type":"exact"},{"name":"tumour of the subglottis","type":"exact"}],"termid":"MONDO:0000933","xrefs":{"Monarch":{"xref_id":"0000933"}}}


id: PBO:0052529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 2","termid":"PBO:0052529"}


id: SO:1000170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant that has not been characterized.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized_chromosomal_mutation","synonyms":[{"name":"uncharacterized chromosomal mutation","type":"exact"}],"termid":"SO:1000170"}


id: MONDO:0011476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunodeficiency by defective expression of HLA class 1 is a very rare, primary, genetic, immunodeficiency disorder characterized by partial or complete absence of human leukocyte antigen class I expression resulting in a non-specific clinical picture of impaired immune response and susceptibility to infections.","definition_xrefs":["Orphanet:34592"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class I deficiency","secondary_identifiers":["DOID:0060009","SCTID:725136003","NANDO:1200328","icd11.foundation:489749747","MEDGEN:346868","OMIMPS:604571","NANDO:2200701","GARD:8427","UMLS:C1858266"],"synonyms":[{"name":"BARE lymphocyte syndrome, type I","type":"related"},{"name":"BLS type 1","type":"related"},{"name":"BLS, type I","type":"exact"},{"name":"BLSI","type":"exact"},{"name":"Bare lymphocyte syndrome type 1","type":"exact"},{"name":"Bare lymphocyte syndrome, type 1","type":"related"},{"name":"Bls, type 1","type":"related"},{"name":"HLA CLASS I deficiency","type":"exact"},{"name":"HLA Class 1 deficiency","type":"related"},{"name":"bare lymphocyte syndrome type I","type":"exact"},{"name":"immunodeficiency by defective expression of HLA class 1","type":"exact"},{"name":"immunodeficiency by defective expression of HLA class type 1","type":"exact"}],"termid":"MONDO:0011476","xrefs":{"Monarch":{"xref_id":"0011476"}}}


id: PATO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000221 urination (obsolete PATO:0000221)","termid":"PATO:0000221"}


id: PR:O59672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C29A3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.09c","secondary_identifiers":["UniProtKB:O59672"],"synonyms":[{"name":"Spom972h-ABCF3","type":"exact"}],"termid":"PR:O59672"}


id: GO:0033050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of clavulanic acid, (2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clavulanic acid metabolic process","termid":"GO:0033049"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"clavulanic acid biosynthetic process","secondary_identifiers":["Wikipedia:Clavulanic_acid"],"synonyms":[{"name":"clavulanic acid anabolism","type":"exact"},{"name":"clavulanic acid biosynthesis","type":"exact"},{"name":"clavulanic acid formation","type":"exact"},{"name":"clavulanic acid synthesis","type":"exact"}],"termid":"GO:0033050"}


id: PBO:0116849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex cyclin-dependent protein kinase Lsk1","termid":"PBO:0116849"}


id: PR:Q09833
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 23S rRNA (uracil-5-)-methyltransferase rumA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil(54)-C(5))-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.07c","secondary_identifiers":["UniProtKB:Q09833"],"synonyms":[{"name":"Spom972h-rumA","type":"exact"}],"termid":"PR:Q09833"}


id: GO:0030520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an estrogen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"estrogen receptor signaling pathway","synonyms":[{"name":"estrogen receptor signalling pathway","type":"broad"},{"name":"intracellular estrogen receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated estrogen signaling pathway","type":"exact"}],"termid":"GO:0030520"}


id: PBO:0062453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 125 pseudogene","termid":"PBO:0062453"}


id: PBO:0040567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 2","termid":"PBO:0040567"}


id: GO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses imidazoleglycerol-phosphate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase complex","synonyms":[{"name":"imidazoleglycerol phosphate synthase complex","type":"exact"}],"termid":"GO:0009382"}


id: GO:0019742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid metabolic process","synonyms":[{"name":"pentacyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0019742"}


id: PBO:0117422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 17","termid":"PBO:0117422"}


id: MONDO:0033533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 45","secondary_identifiers":["OMIM:618951","DOID:0112113","MEDGEN:1731010","UMLS:C5436461"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 45","type":"related"},{"name":"COXPD45","type":"related"}],"termid":"MONDO:0033533","xrefs":{"Monarch":{"xref_id":"0033533"}}}


id: MONDO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of carcinoma cells with glandular differentiation.","definition_xrefs":["NCIT:C6459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymus gland adenocarcinoma","secondary_identifiers":["MEDGEN:234426","UMLS:C1336743","DOID:4923"],"synonyms":[{"name":"Thymus adenocarcinoma","type":"exact"},{"name":"adenocarcinoma of Thymus","type":"exact"},{"name":"adenocarcinoma of the Thymus","type":"exact"},{"name":"thymic adenocarcinoma","type":"exact"},{"name":"thymus adenocarcinoma","type":"exact"}],"termid":"MONDO:0003209","xrefs":{"Monarch":{"xref_id":"0003209"}}}


id: FYPO:0006469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total ncRNA or a specific ncRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mature ncRNA level","synonyms":[{"name":"normal mature ncRNA accumulation","type":"related"},{"name":"normal mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature ncRNA level during vegetative growth","type":"exact"},{"name":"normal mature ncRNA transcript level","type":"exact"},{"name":"normal mature non-coding RNA level","type":"exact"},{"name":"normal ncRNA level","type":"broad"}],"termid":"FYPO:0006469"}


id: GO:2000866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estradiol secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estradiol secretion","termid":"GO:2000864"},{"relation_name":"positively_regulates","term_name":"estradiol secretion","termid":"GO:0035938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of estradiol secretion","synonyms":[{"name":"positive regulation of oestradiol secretion","type":"exact"}],"termid":"GO:2000866"}


id: PBO:0080454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 1","termid":"PBO:0080454"}


id: PBO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2 (predicted)","termid":"PBO:0002207"}


id: GO:1900677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of F-9775B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of F-9775B biosynthetic process","termid":"GO:1900675"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"positively_regulates","term_name":"F-9775B biosynthetic process","termid":"GO:1900614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of F-9775B biosynthetic process","synonyms":[{"name":"activation of F-9775B anabolism","type":"exact"},{"name":"activation of F-9775B biosynthesis","type":"exact"},{"name":"activation of F-9775B biosynthetic process","type":"narrow"},{"name":"activation of F-9775B formation","type":"exact"},{"name":"activation of F-9775B synthesis","type":"exact"},{"name":"positive regulation of F-9775B anabolism","type":"exact"},{"name":"positive regulation of F-9775B biosynthesis","type":"exact"},{"name":"positive regulation of F-9775B formation","type":"exact"},{"name":"positive regulation of F-9775B synthesis","type":"exact"},{"name":"up regulation of F-9775B anabolism","type":"exact"},{"name":"up regulation of F-9775B biosynthesis","type":"exact"},{"name":"up regulation of F-9775B biosynthetic process","type":"exact"},{"name":"up regulation of F-9775B formation","type":"exact"},{"name":"up regulation of F-9775B synthesis","type":"exact"},{"name":"up-regulation of F-9775B anabolism","type":"exact"},{"name":"up-regulation of F-9775B biosynthesis","type":"exact"},{"name":"up-regulation of F-9775B biosynthetic process","type":"exact"},{"name":"up-regulation of F-9775B formation","type":"exact"},{"name":"up-regulation of F-9775B synthesis","type":"exact"},{"name":"upregulation of F-9775B anabolism","type":"exact"},{"name":"upregulation of F-9775B biosynthesis","type":"exact"},{"name":"upregulation of F-9775B biosynthetic process","type":"exact"},{"name":"upregulation of F-9775B formation","type":"exact"},{"name":"upregulation of F-9775B synthesis","type":"exact"}],"termid":"GO:1900677"}


id: GO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microfilament, mediated by motor proteins.","definition_xrefs":["PMID:16306220","PMID:15979253","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion migration along actin filament","synonyms":[{"name":"mitochondrial migration along actin filament","type":"exact"},{"name":"mitochondrial migration along microfilament","type":"exact"},{"name":"mitochondrial migration, actin-mediated","type":"exact"},{"name":"mitochondrion migration along microfilament","type":"exact"},{"name":"mitochondrion transport along actin filament","type":"exact"}],"termid":"GO:0034642"}


id: FYPO:0004592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell becomes cut after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"},{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000337","FYPO:0000004","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"cut following normal mitosis","synonyms":[{"name":"cut following normal mitosis and interphase","type":"exact"},{"name":"cut following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"cut following normal mitosis during vegetative growth","type":"exact"},{"name":"cut following normal mitotic nuclear division","type":"exact"},{"name":"cut following normal nuclear division during mitotic cell cycle","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with normal mitosis","type":"exact"}],"termid":"FYPO:0004592"}


id: PBO:0028084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_density","termid":"PBO:0028084"}


id: PBO:0051995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional adhesion molecule 3","termid":"PBO:0051995"}


id: GO:0061788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Epidermal Growth Factor (EGF) repeats.","definition_xrefs":["GOC:dph","PMID:25155514","GOC:25700513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"EGF repeat binding","synonyms":[{"name":"Epidermal Growth Factor repeat binding","type":"related"},{"name":"Epidermal growth factor domain binding","type":"broad"}],"termid":"GO:0061788"}


id: PBO:0063096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator beta","termid":"PBO:0063096"}


id: PBO:0064828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 8 pseudogene 1","termid":"PBO:0064828"}


id: PR:Q9USN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.06c","secondary_identifiers":["UniProtKB:Q9USN0"],"synonyms":[{"name":"GPI mannosyltransferase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGB","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN0"}


id: GO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular cardiac muscle tissue morphogenesis","synonyms":[{"name":"left ventricular myocardium morphogenesis","type":"exact"}],"termid":"GO:0003220"}


id: PBO:0038763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3C","termid":"PBO:0038763"}


id: PR:G2TRK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.19 gene.","definition_xrefs":["UniProtKB:G2TRK1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.19","synonyms":[{"name":"Spom972h-SPAC17A5.19","type":"exact"}],"termid":"PR:G2TRK1"}


id: PBO:0003872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl-AMP cyclohydrolase/phosphoribosyl- ATP pyrophosphohydrolase His7","termid":"PBO:0003872"}


id: GO:0052520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of nutrient release from other organism involved in symbiotic interaction (obsolete GO:0052520)","synonyms":[{"name":"activation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"promotion of nutrient release from other organism","type":"exact"},{"name":"stimulation by organism of nutrient release from other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of nutrient release from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052520"}


id: FYPO:0007163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}


id: GO:0099404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which telomeres of sister chromatids are joined during mitosis.","definition_xrefs":["GOC:mah","PMID:26373281","GOC:BHF_telomere","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"mitotic sister chromatid cohesion at telomere","type":"exact"},{"name":"sister chromatid cohesion at telomere at mitosis","type":"exact"},{"name":"telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:0099404"}


id: GO:1904515
data:
  {"annotated_genes":["SJAG_05030","SJAG_00143","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90665,97253,106547],"is_not":false,"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TORC2 signaling.","definition_xrefs":["PMID:25590601","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of TOR signaling","termid":"GO:0032008"},{"relation_name":"is_a","term_name":"regulation of TORC2 signaling","termid":"GO:1903939"},{"relation_name":"positively_regulates","term_name":"TORC2 signaling","termid":"GO:0038203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TORC2 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TORC2 signal transduction","type":"narrow"},{"name":"activation of TORC2 signaling","type":"narrow"},{"name":"positive regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signal transduction","type":"exact"},{"name":"up regulation of TORC2 signaling","type":"exact"},{"name":"up-regulation of TORC2 signal transduction","type":"exact"},{"name":"up-regulation of TORC2 signaling","type":"exact"},{"name":"upregulation of TORC2 signal transduction","type":"exact"},{"name":"upregulation of TORC2 signaling","type":"exact"}],"termid":"GO:1904515","terms_by_termid":{"GO:1904515":null}}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: PBO:0038509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 4","termid":"PBO:0038509"}


id: GO:1990569
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79359],"is_not":false,"summary":null,"term":"GO:1990569"}]},"cv_name":"biological_process","definition":"The process in which UDP-N-acetylglucosamine is transported across a membrane.","definition_xrefs":["PMID:10788474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015788"],"synonyms":[{"name":"UDP-N-acetylglucosamine transport","type":"related"}],"termid":"GO:1990569","terms_by_termid":{"GO:1990569":null}}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: MONDO:0007672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glomuvenous malformations (GVMs) are hereditary vascular malformations characterized by the presence of small, multifocal bluish-purple venous lesions involving the skin.","definition_xrefs":["Orphanet:83454"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glomangioma","termid":"MONDO:0002299"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular malformation","termid":"MONDO:0024291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomuvenous malformation","secondary_identifiers":["MESH:C536827","NCIT:C5350","SCTID:715644000","UMLS:C1841984","OMIM:138000","MedDRA:10018381","icd11.foundation:2095305475","MEDGEN:374834","GARD:16728","DOID:7996"],"synonyms":[{"name":"GLOMUVENOUS malformations","type":"related"},{"name":"GVM","type":"related"},{"name":"VMGLOM","type":"exact"},{"name":"Venous malformations with glomus cells","type":"exact"},{"name":"familial glomangioma","type":"exact"},{"name":"glomangiomas, multiple","type":"related"},{"name":"glomangiomatosis","type":"related"},{"name":"glomus tumors, multiple","type":"related"},{"name":"glomuvenous malformation","type":"exact"},{"name":"hereditary glomangioma","type":"exact"},{"name":"hereditary multiple glomangiomas","type":"exact"},{"name":"multiple glomus tumors","type":"exact"},{"name":"multiple glomus tumours","type":"exact"}],"termid":"MONDO:0007672","xrefs":{"Monarch":{"xref_id":"0007672"}}}


id: PBO:0060703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5","termid":"PBO:0060703"}


id: PBO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 1","termid":"PBO:0044306"}


id: PBO:0041944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 5","termid":"PBO:0041944"}


id: MONDO:0007047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrokeratoelastoidosis of Costa is a rare dermatosis characterized by small, firm papules or plaques (resembling warts) on the sides of the hands and feet. These stationary and asymptomatic lesions appear generally at puberty, or sometimes later","definition_xrefs":["Orphanet:38"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","termid":"MONDO:0016436"},{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type III","secondary_identifiers":["UMLS:C0545044","EFO:1000758","MEDGEN:107467","DOID:0060362","GARD:125","MESH:C535653","OMIM:101850"],"synonyms":[{"name":"AKE","type":"exact"},{"name":"NTIA","type":"related"},{"name":"PPKP3","type":"exact"},{"name":"TIA","type":"related"},{"name":"acrokeratoelastoidosis","type":"related"},{"name":"acrokeratoelastoidosis of Costa","type":"exact"},{"name":"aganglionosis, total colonic","type":"related"},{"name":"ake","type":"exact"},{"name":"collagenous plaques of hand and feet","type":"related"},{"name":"collagenous plaques of hands and feet","type":"related"},{"name":"keratoderma, palmoplantar, punctate type 3","type":"exact"},{"name":"near-total intestinal aganglionosis","type":"related"},{"name":"palmoplantar keratoderma, punctate type 3","type":"related"},{"name":"palmoplantar keratoderma, punctate type III","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 3","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3","type":"exact"},{"name":"rare form of Hirschsprung's disease","type":"related"}],"termid":"MONDO:0007047","xrefs":{"Monarch":{"xref_id":"0007047"}}}


id: MONDO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"simple chronic conjunctivitis","secondary_identifiers":["DOID:9512","ICD9:372.11","UMLS:C0155146","MEDGEN:509807","SCTID:8211008"],"termid":"MONDO:0004811","xrefs":{"Monarch":{"xref_id":"0004811"}}}


id: GO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"positively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic juice secretion","termid":"GO:0090187"}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: FYPO:0001201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to calcium ion starvation","synonyms":[{"name":"decreased growth during cellular response to calcium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to calcium ion starvation","type":"exact"},{"name":"hypersensitive to calcium ion starvation","type":"exact"},{"name":"reduced growth in low calcium","type":"related"},{"name":"sensitive to calcium ion depletion","type":"exact"},{"name":"sensitive to calcium ion deprivation","type":"exact"},{"name":"sensitive to calcium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to calcium starvation","type":"exact"}],"termid":"FYPO:0001201"}


id: GO:0032940
data:
  {"annotated_genes":["SJAG_02166","SJAG_03754","SJAG_02366","SJAG_00661","SJAG_02753","SJAG_02587","SJAG_03938","SJAG_01448","SJAG_03763","SJAG_01722","SJAG_04044","SJAG_03246","SJAG_03718","SJAG_01925","SJAG_02572","SJAG_03915","SJAG_03005","SJAG_03864","SJAG_04343","SJAG_03499","SJAG_04509","SJAG_00355","SJAG_02004","SJAG_04966","SJAG_04960","SJAG_04058","SJAG_01048","SJAG_04517","SJAG_07004","SJAG_00280","SJAG_02012","SJAG_00826","SJAG_01563","SJAG_03536","SJAG_02368","SJAG_03357","SJAG_02320","SJAG_01697","SJAG_01772","SJAG_02518","SJAG_00332","SJAG_00430"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87853,102190,116747,73209,75069,90948,72145,79775,96957,73731,73144,72445,88218,91495,93340,104618,112500,91744,90618,72812,87442,94487,94521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[99695],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[87350,97901,61628],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[117834,91806,60675,71539,90043,81588,76884,81850],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[67304,90213,117337,88079,99061,113755,101447,60674],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion by cell","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Secretion"],"synonyms":[{"name":"cellular secretion","type":"exact"}],"termid":"GO:0032940","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: PR:O60148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18H10.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.18c","synonyms":[{"name":"Spom972h-SPBC18H10.18c","type":"exact"}],"termid":"PR:O60148"}


id: GO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"negatively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle maturation","synonyms":[{"name":"down regulation of hair follicle maturation","type":"exact"},{"name":"down-regulation of hair follicle maturation","type":"exact"},{"name":"downregulation of hair follicle maturation","type":"exact"},{"name":"inhibition of hair follicle maturation","type":"narrow"}],"termid":"GO:0048817"}


id: PBO:0057322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519b","termid":"PBO:0057322"}


id: MONDO:0700203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pestivirus infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203","xrefs":{"Monarch":{"xref_id":"0700203"}}}


id: PBO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACCSL pseudogene 1","termid":"PBO:0110027"}


id: PBO:0111864
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0111864"}


id: GO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in an encysted zoospore, that germinates by developing a germ tube that may penetrate the host directly or indirectly through an appressorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encysted zoospore germination","synonyms":[{"name":"encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075226"}


id: PBO:0054741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2150","termid":"PBO:0054741"}


id: PBO:0079743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 10","termid":"PBO:0079743"}


id: MONDO:0035151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, multiple congenital anomalies/dysmorphic features-intellectual disability syndrome characterized by developmental and speech delay, intellectual disability, feeding difficulties, failure to thrive, growth retardation, and associated malformations such as abnormality of fingers and toes (i.e. clinodactyly of the 5th finger, 2-3 toe syndactyly), microcephaly, heart defects, and upper airways anomalies. Observed facial dysmorphism includes hypertelorism, small, narrow or downslanting palpebral fissures, ptosis, epicanthus, ear malformations, broad nasal bridge, bulbous/prominent nose, short philtrum, thin lips, retrognathia/micrognathia, arched/cleft palate, and dental anomalies. Additional variable manifestations include hearing and visual impairment, seizures, joint anomalies, obesity, and behavioral/psychiatric disorders.","definition_xrefs":["Orphanet:529962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17q24.2 microdeletion syndrome","secondary_identifiers":["GARD:22202","MEDGEN:1808156","UMLS:C5680185"],"synonyms":[{"name":"Del(17)(q24)","type":"exact"}],"termid":"MONDO:0035151","xrefs":{"Monarch":{"xref_id":"0035151"}}}


id: PBO:0059006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC pseudogene 2","termid":"PBO:0059006"}


id: GO:0007296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of yolk. Yolk is a mixture of materials used for embryonic nutrition.","definition_xrefs":["ISBN:0879694238","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vitellogenesis","secondary_identifiers":["Wikipedia:Vitellogenesis"],"synonyms":[{"name":"yolk formation","type":"exact"},{"name":"yolk production","type":"exact"}],"termid":"GO:0007296"}


id: PBO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL19 antisense RNA 1","termid":"PBO:0047366"}


id: GO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fusome of ovarian cells, an organelle derived from the spectrosome. It anchors the mitotic spindle pole to provide orientation during cystoblast cell divisions.","definition_xrefs":["ISBN:0879694238","GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusome organization","termid":"GO:0045478"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian fusome organization","synonyms":[{"name":"ovarian fusome organisation","type":"exact"},{"name":"ovarian fusome organization and biogenesis","type":"related"}],"termid":"GO:0030723"}


id: PBO:0053605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 638","termid":"PBO:0053605"}


id: FYPO:0004619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules nucleated from the equatorial microtubule organizing center (eMTOC).","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center absent from cell","type":"exact"}],"termid":"FYPO:0004619"}


id: GO:0044113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.","definition_xrefs":["GO:jl","GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete development in other organism involved in symbiotic interaction (obsolete GO:0044113)","synonyms":[{"name":"development in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0044113"}


id: MOD:01399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-(ADP-ribosyl)-L-lysine.","definition_xrefs":["PubMed:18436469","RESID:AA0476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(ADP-ribosyl)-L-lysine","synonyms":[{"name":"(S)-2-amino-6-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(ADP-ribosyl)amino-hexanoic acid","type":"exact"},{"name":"MOD_RES N6-(ADP-ribosyl)lysine","type":"exact"},{"name":"N(zeta)-ADP-ribosyllysine","type":"exact"},{"name":"N6-(ADP-ribosyl)-L-lysine","type":"exact"},{"name":"N6-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-lysine","type":"exact"},{"name":"N6-alpha-D-ribofuranosyl-L-lysine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"epsilon-ADP-ribosyllysine","type":"exact"}],"termid":"MOD:01399"}


id: MONDO:0009217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by pancytopenia, immune deficiency and cutaneous malignancies.","definition_xrefs":["DOID:0090066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-like syndrome","secondary_identifiers":["OMIM:227850","UMLS:C0151638","MEDGEN:56237","SCTID:236469003","MESH:C536855"],"synonyms":[{"name":"Fanconi-like syndrome","type":"exact"}],"termid":"MONDO:0009217","xrefs":{"Monarch":{"xref_id":"0009217"}}}


id: PBO:0042874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 126","termid":"PBO:0042874"}


id: PBO:0038664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 2","termid":"PBO:0038664"}


id: GO:0060048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Muscle contraction of cardiac muscle tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle contraction","synonyms":[{"name":"heart muscle contraction","type":"exact"}],"termid":"GO:0060048"}


id: PBO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle exit and neuronal differentiation 1","termid":"PBO:0042718"}


id: GO:2000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of opioid receptor signaling pathway","synonyms":[{"name":"negative regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000475"}


id: PBO:0048710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 2","termid":"PBO:0048710"}


id: GO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrate-CoA ligase activity (obsolete GO:0047760)","termid":"GO:0047760"}


id: GO:0044077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances host receptor-mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host vesicle-mediated transport","termid":"GO:1990215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host receptor-mediated endocytosis","synonyms":[{"name":"modulation by symbiont of host receptor-mediated endocytosis","type":"exact"},{"name":"modulation of host receptor-mediated endocytosis by symbiont","type":"exact"},{"name":"regulation by symbiont of host receptor-mediated endocytosis","type":"exact"}],"termid":"GO:0044077"}


id: PBO:0074583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2B","termid":"PBO:0074583"}


id: GO:0140800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4-aminobutanoate(out) + H+(in) = 4-aminobutanoate(in) + H+(out).","definition_xrefs":["PMID:16701208","PMID:26912364","PMID:27601664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gamma-aminobutyric acid:proton antiporter activity","termid":"GO:0140800"}


id: GO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopenicillin N = penicillin N.","definition_xrefs":["EC:5.1.1.17","RHEA:20033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"isopenicillin-N epimerase activity","secondary_identifiers":["MetaCyc:5.1.1.17-RXN","KEGG_REACTION:R04147"],"synonyms":[{"name":"isopenicillin N epimerase activity","type":"exact"},{"name":"penicillin-N 5-amino-5-carboxypentanoyl-epimerase activity","type":"related"}],"termid":"GO:0045439"}


id: PBO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin H","termid":"PBO:0044199"}


id: GO:0097466
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93020,95202],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["GOC:bf","PMID:16079177","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: PBO:0067783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 85","termid":"PBO:0067783"}


id: GO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + UDP-alpha-D-glucose = a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["RHEA:12088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"ceramide glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.80","Reactome:R-HSA-1638104","MetaCyc:CERAMIDE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-ceramide glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:ceramide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"ceramide:UDP-glucose glucosyltransferase activity","type":"related"},{"name":"ceramide:UDPGlc glucosyltransferase activity","type":"related"},{"name":"glucosylceramide synthase activity","type":"related"},{"name":"uridine diphosphoglucose-ceramide glucosyltransferase activity","type":"related"}],"termid":"GO:0008120"}


id: MONDO:0011575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebro-oculo-nasal syndrome is a multisystem malformation syndrome that has been reported in about 10 patients. The clinical features include bilateral anophthalmia, abnormal nares, central nervous system anomalies, and neurodevelopmental delay.","definition_xrefs":["Orphanet:66625"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrooculonasal syndrome","secondary_identifiers":["MESH:C565313","UMLS:C1854108","GARD:3480","OMIM:605627","MEDGEN:340138","SCTID:720855003"],"synonyms":[{"name":"cerebrooculonasal syndrome","type":"exact"}],"termid":"MONDO:0011575","xrefs":{"Monarch":{"xref_id":"0011575"}}}


id: PBO:0069123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 373, pseudogene","termid":"PBO:0069123"}


id: GO:0007074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase II promoter (obsolete GO:0007074)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol II promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0007074"}


id: PBO:0064773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 4","termid":"PBO:0064773"}


id: GO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"activation of pyrimidine base metabolic process","type":"narrow"},{"name":"positive regulation of pyrimidine base metabolic process","type":"exact"},{"name":"positive regulation of pyrimidine base metabolism","type":"exact"},{"name":"stimulation of pyrimidine base metabolic process","type":"narrow"},{"name":"up regulation of pyrimidine base metabolic process","type":"exact"},{"name":"up-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"upregulation of pyrimidine base metabolic process","type":"exact"}],"termid":"GO:0045985"}


id: PBO:0041530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 95","termid":"PBO:0041530"}


id: MONDO:1011966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia with craniofacial deformity and disproportionate dwarfism, non-human animal","secondary_identifiers":["OMIA:001903"],"termid":"MONDO:1011966","xrefs":{"Monarch":{"xref_id":"1011966"}}}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75911,76703],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:14739239","PMID:10779558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: GO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of competence for transformation","synonyms":[{"name":"activation of establishment of competence for transformation","type":"narrow"},{"name":"activator of the establishment of competence for transformation activity","type":"related"},{"name":"stimulation of establishment of competence for transformation","type":"narrow"},{"name":"up regulation of establishment of competence for transformation","type":"exact"},{"name":"up-regulation of establishment of competence for transformation","type":"exact"},{"name":"upregulation of establishment of competence for transformation","type":"exact"}],"termid":"GO:0045809"}


id: PBO:0049488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.10 linker histone","termid":"PBO:0049488"}


id: GO:0032334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an inhibin, either of two glycoproteins (designated A and B), secreted by the gonads and present in seminal plasma and follicular fluid, that inhibit pituitary production of follicle-stimulating hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"inhibin secretion","termid":"GO:0032334"}


id: PBO:0061027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA involved in NHEJ oncogenic ligation efficiency","termid":"PBO:0061027"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["CL:0000333","PMID:17076275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: GO:0018471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-chlorobenzaldehyde + 2 H2O = 4-chlorobenzoate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0447"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-chlorobenzaldehyde oxidase activity (obsolete GO:0018471)","termid":"GO:0018471"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: PBO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by PBF transcription complex","termid":"PBO:0000218"}


id: GO:1905099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:TermGenie","PMID:20484009","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of guanyl-nucleotide exchange factor activity (obsolete GO:1905099)","synonyms":[{"name":"activation of GDP-dissociation stimulator activity","type":"narrow"},{"name":"activation of GDS","type":"narrow"},{"name":"activation of GEF","type":"narrow"},{"name":"activation of GNRP","type":"narrow"},{"name":"activation of guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide release factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide releasing factor","type":"narrow"},{"name":"positive regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"positive regulation of GDS","type":"exact"},{"name":"positive regulation of GEF","type":"exact"},{"name":"positive regulation of GNRP","type":"narrow"},{"name":"positive regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"positive regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up regulation of GDS","type":"exact"},{"name":"up regulation of GEF","type":"exact"},{"name":"up regulation of GNRP","type":"narrow"},{"name":"up regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up-regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up-regulation of GDS","type":"exact"},{"name":"up-regulation of GEF","type":"exact"},{"name":"up-regulation of GNRP","type":"narrow"},{"name":"up-regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"upregulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"upregulation of GDS","type":"exact"},{"name":"upregulation of GEF","type":"exact"},{"name":"upregulation of GNRP","type":"narrow"},{"name":"upregulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905099"}


id: GO:0032921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of 4 protein subunits as a heterotetramer, that possesses sarcosine oxidase activity.","definition_xrefs":["GOC:mlg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"sarcosine oxidase complex","termid":"GO:0032921"}


id: MONDO:0020319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloblastic leukemia without maturation (obsolete MONDO:0020319)","termid":"MONDO:0020319","xrefs":{"Monarch":{"xref_id":"0020319"}}}


id: GO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a female gonad is generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonad morphogenesis","termid":"GO:0035262"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female gonad morphogenesis","synonyms":[{"name":"ovary morphogenesis","type":"related"}],"termid":"GO:0061040"}


id: GO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen bound to a cell surface pattern recognition receptor (PRR).","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation initiated by pattern recognition receptor mediated uptake of antigen","synonyms":[{"name":"antigen processing and presentation initiated by PAMP receptor mediated uptake of antigen","type":"exact"},{"name":"antigen processing and presentation initiated by PRR mediated uptake of antigen","type":"exact"}],"termid":"GO:0002748"}


id: PBO:0041917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 1","termid":"PBO:0041917"}


id: GO:1990826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nucleoplasm situated in close proximity and peripheral to a nuclear pore complex.","definition_xrefs":["PMID:10633080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"nucleoplasmic periphery of the nuclear pore complex","synonyms":[{"name":"associated with the nuclear pore","type":"related"}],"termid":"GO:1990826"}


id: MOD:00737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylneuraminic acid (sialic acid) group through a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylneuraminylated","synonyms":[{"name":"N-acetylneuraminic acid (Sialic acid, NeuAc, NANA, SA)","type":"exact"},{"name":"NeuNAc","type":"exact"}],"termid":"MOD:00737"}


id: PBO:0026656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_glucose_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0026656"}


id: FYPO:0006876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:29249658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell cortex of cell tip","synonyms":[{"name":"normal protein localisation to cell cortex of cell tip","type":"exact"},{"name":"normal protein localization to cell tip cortex","type":"exact"}],"termid":"FYPO:0006876"}


id: MONDO:0800469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex set of inherited conditions caused by a pathogenic variant(s) in the ACD gene that results in aberrant telomere biology.","definition_xrefs":["PMID:20301779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related telomere biology disorder","synonyms":[{"name":"ACD-related telomeropathy","type":"exact"}],"termid":"MONDO:0800469","xrefs":{"Monarch":{"xref_id":"0800469"}}}


id: PATO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000390 extreme (obsolete PATO:0000390)","termid":"PATO:0000390"}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: PBO:0003719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase homolog","termid":"PBO:0003719"}


id: GO:0030874
data:
  {"annotated_genes":["SJAG_01005","SJAG_05180","SJAG_05237","SJAG_01509","SJAG_03905","SJAG_03923","SJAG_02723","SJAG_03603","SJAG_02879","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91837,94812,98057,102432,106195,107344],"is_not":false,"summary":null,"term":"GO:0030874"},{"annotations":[100690,114874,119020,98787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"The portion of nuclear chromatin associated with the nucleolus; includes the DNA encoding the ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01005":null,"SJAG_01509":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03603":null,"SJAG_03905":null,"SJAG_03923":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005730","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleolar chromatin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0030874","terms_by_termid":{"GO:0030874":null,"GO:0030875":null}}


id: GO:1900611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of F-9775A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"F-9775A metabolic process","termid":"GO:1900609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"F-9775A biosynthetic process","synonyms":[{"name":"F-9775A anabolism","type":"exact"},{"name":"F-9775A biosynthesis","type":"exact"},{"name":"F-9775A formation","type":"exact"},{"name":"F-9775A synthesis","type":"exact"}],"termid":"GO:1900611"}


id: PBO:0053853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1122","termid":"PBO:0053853"}


id: PBO:0012532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_commitment_to","termid":"PBO:0012532"}


id: GO:0071514
data:
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id: PBO:0055559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2995","termid":"PBO:0055559"}


id: GO:0030864
data:
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id: PBO:0078702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 4-1","termid":"PBO:0078702"}


id: PBO:0076001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIL centriolar assembly protein","termid":"PBO:0076001"}


id: PBO:0047364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 18","termid":"PBO:0047364"}


id: PBO:0056187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A1","termid":"PBO:0056187"}


id: PBO:0003036
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id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: MONDO:1010914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary abnormal increase in muscular tissue caused by enlargement of existing cells in cattle due to a variation in the MSTN gene.","definition_xrefs":["OMIA:000683-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertrophy, MSTN-related, cattle","synonyms":[{"name":"double muscling","type":"exact"}],"termid":"MONDO:1010914","xrefs":{"Monarch":{"xref_id":"1010914"}}}


id: PBO:0110978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule (CD36 blood group)","termid":"PBO:0110978"}


id: SO:0001527
data:
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id: GO:1990374
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id: PATO:0000834
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id: GO:0062179
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id: GO:0019932
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id: GO:0004518
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id: GO:0102440
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id: MONDO:0031043
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id: MONDO:0012771
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the CHI3L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 7","secondary_identifiers":["UMLS:C2677770","MEDGEN:394362","OMIM:611960"],"synonyms":[{"name":"ASRT7","type":"related"},{"name":"CHI3L1 inherited susceptibility to asthma","type":"exact"},{"name":"asthma-RELATED traits, susceptibility to, 7","type":"related"},{"name":"asthma-related traits, susceptibility to, 7","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 7","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in CHI3L1","type":"exact"}],"termid":"MONDO:0012771","xrefs":{"Monarch":{"xref_id":"0012771"}}}


id: PBO:0077974
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 2-1","termid":"PBO:0077974"}


id: PATO:0001170
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id: PBO:0047414
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 5","termid":"PBO:0047414"}


id: PBO:0091691
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id: PBO:0000333
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id: PBO:0059579
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id: GO:0039654
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id: GO:0046653
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id: PBO:0031728
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id: SO:0000269
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id: GO:1905046
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id: FYECO:0000203
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id: MONDO:0850421
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id: FYPO:0007246
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id: PBO:0062516
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id: MONDO:0004884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eye.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eye degenerative disorder","secondary_identifiers":["ICD9:360.4","SCTID:62585004","DOID:9799","ICD9:360.40","MEDGEN:509655","ICD9:360.20","ICD10CM:H44.5","ICD9:360.2","UMLS:C0154777","ICD9:360.29"],"synonyms":[{"name":"degenerative disorder of eye","type":"exact"},{"name":"degenerative disorder of globe","type":"related"},{"name":"eye neurodegenerative disease","type":"exact"},{"name":"eyeball of camera-type eye neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyeball of camera-type eye","type":"exact"}],"termid":"MONDO:0004884","xrefs":{"Monarch":{"xref_id":"0004884"}}}


id: MONDO:0019722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the renal glomerulus.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerular disorder","secondary_identifiers":["SCTID:197679002","EFO:1002049","GTR:AN0966176","ICD10CM:N00-N08","NCIT:C120887","Orphanet:93548"],"synonyms":[{"name":"disease of renal glomerulus","type":"exact"},{"name":"disease or disorder of renal glomerulus","type":"exact"},{"name":"disorder of renal glomerulus","type":"exact"},{"name":"glomerulopathies","type":"related"},{"name":"glomerulopathy","type":"exact"},{"name":"renal glomerulus disease","type":"exact"},{"name":"renal glomerulus disease or disorder","type":"exact"}],"termid":"MONDO:0019722","xrefs":{"Monarch":{"xref_id":"0019722"}}}


id: PBO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 2","termid":"PBO:0047336"}


id: MONDO:0018651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lipoyl transferase 2 deficiency (obsolete MONDO:0018651)","secondary_identifiers":["Orphanet:447795"],"termid":"MONDO:0018651","xrefs":{"Monarch":{"xref_id":"0018651"}}}


id: PBO:0038338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kleptoparasitized_by","termid":"PBO:0038338"}


id: PBO:0030025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion","termid":"PBO:0030025"}


id: PBO:0055863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 10","termid":"PBO:0055863"}


id: MOD:00820
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and a glycine residue to form 2-imino-alanine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0410","PubMed:16627946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-ethanimidoyl-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2,N-didehydroalanyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(1-iminoethyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-alanine 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-alanyl-5-imidazolinone glycine","type":"exact"},{"name":"[2-(1-iminoethyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein zRFP574 chromophore","type":"exact"}],"termid":"MOD:00820"}


id: MONDO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronopathy, distal hereditary motor (obsolete MONDO:0000075)","termid":"MONDO:0000075","xrefs":{"Monarch":{"xref_id":"0000075"}}}


id: FYPO:0002523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}


id: GO:0070913
data:
  {"annotated_genes":["SJAG_01480","SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87813,90329],"is_not":false,"summary":null,"term":"GO:0070913"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Wdr21 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01480":null,"SJAG_03454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Ddb1-Wdr21 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070913","terms_by_termid":{"GO:0070913":null}}


id: FYPO:0006799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclear MIS12/MIND complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear MIS12/MIND complex binding","synonyms":[{"name":"abolished nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"abolished nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"},{"name":"nuclear MIS12/MIND complex binding abolished","type":"exact"}],"termid":"FYPO:0006799"}


id: PBO:0039795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 2","termid":"PBO:0039795"}


id: PR:Q9P376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23081:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.05c","secondary_identifiers":["UniProtKB:Q9P376"],"synonyms":[{"name":"CTD phosphatase fcp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19B12.05c","type":"related"},{"name":"Spom972h-CTDP1","type":"exact"}],"termid":"PR:Q9P376"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.7","KEGG_REACTION:R01180","MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: PBO:0059676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 42","termid":"PBO:0059676"}


id: GO:0001193
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80724],"is_not":false,"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from an RNA polymerase II promoter.","definition_xrefs":["PMID:17535246","GOC:txnOH","PMID:14531857","PMID:16492753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001193","terms_by_termid":{"GO:0001193":null}}


id: MONDO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inhalation anthrax (obsolete MONDO:0000269)","termid":"MONDO:0000269","xrefs":{"Monarch":{"xref_id":"0000269"}}}


id: GO:1902235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:rl","PMID:20160352","GOC:TermGenie","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced apoptosis","type":"exact"},{"name":"regulation of apoptosis in response to ER stress","type":"exact"},{"name":"regulation of apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902235"}


id: PBO:0088896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis RNA-binding protein Mrd1","termid":"PBO:0088896"}


id: MONDO:0017246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary sequestration","termid":"MONDO:0017843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extralobar congenital pulmonary sequestration","secondary_identifiers":["UMLS:C5679951","Orphanet:280811","MEDGEN:1843113","GARD:21091"],"synonyms":[{"name":"congenital extrapulmonary sequestration","type":"exact"},{"name":"extralobar congenital bronchopulmonary sequestration","type":"exact"}],"termid":"MONDO:0017246","xrefs":{"Monarch":{"xref_id":"0017246"}}}


id: MONDO:0017743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-N-acetylgalactosaminylglycan synthesis (obsolete MONDO:0017743)","secondary_identifiers":["Orphanet:309458"],"termid":"MONDO:0017743","xrefs":{"Monarch":{"xref_id":"0017743"}}}


id: PBO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086013"}


id: PR:P50527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase shk1/pak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.14c","synonyms":[{"name":"Spom972h-shk1","type":"exact"}],"termid":"PR:P50527"}


id: MONDO:0007433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dementia/parkinsonism with non-Alzheimer amyloid plaques","secondary_identifiers":["MESH:C565115","MEDGEN:338883","OMIM:125320","UMLS:C1852223"],"synonyms":[{"name":"dementia/parkinsonism with non-Alzheimer amyloid plaques","type":"exact"}],"termid":"MONDO:0007433","xrefs":{"Monarch":{"xref_id":"0007433"}}}


id: GO:1902964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:18362153","GOC:TermGenie","GOC:sjp","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902964)","synonyms":[{"name":"activation of metalloendopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902964"}


id: GO:0043331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dsRNA","synonyms":[{"name":"response to double-stranded RNA","type":"exact"}],"termid":"GO:0043331"}


id: FYPO:0004231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of methylated histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal methylated histone binding","termid":"FYPO:0004231"}


id: GO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont causes the formation of a mass of cells in a host organism. While these growths are often called nodules, they are not formed as nitrogen-fixing structures, but rather to provide an environment for the symbiont to grow. In this sense they are parasitic structures rather than mutualistic.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated induction of tumor or growth in host","secondary_identifiers":["GO:0044006","GO:0051820","GO:0044005"],"synonyms":[{"name":"induction by symbiont in host of tumor, nodule, or growth","type":"related"},{"name":"induction by symbiont in host of tumor, nodule, or growth containing transformed cells","type":"related"},{"name":"induction by symbiont of nodulation, tumor or growth in host","type":"related"},{"name":"induction by symbiont of tumor or growth in host","type":"exact"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth containing transformed cells in other organism involved in symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism during symbiotic interaction","type":"related"},{"name":"induction of tumor, nodule, or growth in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0051819"}


id: PBO:0039170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 2","termid":"PBO:0039170"}


id: GO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD) from the nicotinamide riboside (NR).","definition_xrefs":["PMID:17482543"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD biosynthesis via nicotinamide riboside salvage pathway (obsolete GO:0034356)","secondary_identifiers":["Reactome:R-HSA-197264","MetaCyc:PWY3O-4106"],"synonyms":[{"name":"NR salvage pathway","type":"exact"},{"name":"nicotinamide riboside salvage pathway","type":"exact"}],"termid":"GO:0034356"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: PBO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 63","termid":"PBO:0042766"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: PBO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 6","termid":"PBO:0050189"}


id: PBO:0073768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 1 adaptor protein pseudogene 2","termid":"PBO:0073768"}


id: PBO:0066009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY heterogeneous nuclear ribonucleoprotein","termid":"PBO:0066009"}


id: GO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microbody, a cytoplasmic organelle, spherical or oval in shape, that is bounded by a single membrane and contains oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microbody part (obsolete GO:0044438)","termid":"GO:0044438"}


id: PBO:0028573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028573"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0061848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 2","termid":"PBO:0061848"}


id: PBO:0085786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase","termid":"PBO:0085786"}


id: GO:0006578
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111119,103154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72688,103155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"betaine anabolism","type":"exact"},{"name":"betaine biosynthesis","type":"exact"},{"name":"betaine biosynthetic process","type":"exact"},{"name":"betaine formation","type":"exact"},{"name":"betaine synthesis","type":"exact"}],"termid":"GO:0006578","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: PBO:0040146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 1","termid":"PBO:0040146"}


id: MONDO:0971141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"localized pleural mesothelioma","secondary_identifiers":["MEDGEN:1863756","Orphanet:675833","UMLS:C5925094"],"termid":"MONDO:0971141","xrefs":{"Monarch":{"xref_id":"0971141"}}}


id: GO:0099611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the potential at which an axon potential is triggered.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential firing threshold","termid":"GO:0099611"}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: MONDO:0006038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"It describes patients in whom a diagnosis of ulcerative colitis or Crohn's disease cannot be made based on standard clinical testing, including colonoscopy, imaging, laboratory tests, and biopsy.","definition_xrefs":["EFO:1000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"indeterminate colitis","secondary_identifiers":["UMLS:C0341332","MEDGEN:87418","ICD10CM:K52.3","ICD9:558.9","NCIT:C27110","SCTID:235746007","icd11.foundation:553916326"],"synonyms":[{"name":"colitis of indeterminate type","type":"exact"}],"termid":"MONDO:0006038","xrefs":{"Monarch":{"xref_id":"0006038"}}}


id: PBO:0081281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 56, pseudogene","termid":"PBO:0081281"}


id: GO:0030332
data:
  {"annotated_genes":["SJAG_03967","SJAG_00435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73262,76047],"is_not":false,"summary":null,"term":"GO:0030332"}]},"cv_name":"molecular_function","definition":"Binding to cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclin binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030332","terms_by_termid":{"GO:0030332":null}}


id: MONDO:0011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Limb-mammary syndrome (LMS) is a rare disease belonging to the group of ectodermal dysplasias.","definition_xrefs":["Orphanet:69085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"limb-mammary syndrome","secondary_identifiers":["SCTID:721972001","UMLS:C1863753","GARD:10051","icd11.foundation:1958986288","OMIM:603543","MESH:C535903","MEDGEN:355051"],"synonyms":[{"name":"LMS","type":"exact"},{"name":"limb-mammary syndrome","type":"exact"},{"name":"mammary hypoplasia, ectrodactyly, and other hand/foot anomalies","type":"related"}],"termid":"MONDO:0011334","xrefs":{"Monarch":{"xref_id":"0011334"}}}


id: GO:0004133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of branch points in branched glycogen polymers.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glycogen debranching enzyme activity (obsolete GO:0004133)","termid":"GO:0004133"}


id: PBO:0079769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 pseudogene 2","termid":"PBO:0079769"}


id: PBO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglutamate synthase","termid":"PBO:0060455"}


id: MONDO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paratesticular adenocarcinoma","secondary_identifiers":["Orphanet:363478","MEDGEN:1678623","UMLS:C5190800","GARD:21550"],"synonyms":[{"name":"adenocarcinoma of paratestis","type":"exact"},{"name":"adenocarcinoma of the paratestis","type":"exact"}],"termid":"MONDO:0018192","xrefs":{"Monarch":{"xref_id":"0018192"}}}


id: PBO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase Coq6 (predicted)","termid":"PBO:0003431"}


id: GO:0101027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons of the optical nerve following their loss or damage.","definition_xrefs":["PMID:16699509","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optical nerve axon regeneration","termid":"GO:0101027"}


id: PBO:0028892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0028892"}


id: GO:0005798
data:
  {"annotated_genes":["SJAG_04070","SJAG_01285","SJAG_01927","SJAG_02160","SJAG_02240","SJAG_00669","SJAG_04517","SJAG_01025","SJAG_04002","SJAG_01809","SJAG_00916","SJAG_02282","SJAG_04569","SJAG_04565","SJAG_04474","SJAG_00192","SJAG_00092","SJAG_02234","SJAG_03368","SJAG_04402","SJAG_00379","SJAG_01508","SJAG_04609","SJAG_02482","SJAG_04391","SJAG_02012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94518,114596],"is_not":false,"summary":null,"term":"GO:0005798"},{"annotations":[79402,62747,112372,112584],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58983,66588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[75398,65274,92702,80115,72622,97956,79799,81677,106676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[91085,99028,92615,113734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030137"},{"annotations":[64260,58152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"},{"annotations":[79081,73680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[99707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00192":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01025":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_01927":null,"SJAG_02012":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"Golgi-associated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao819927218"],"synonyms":[{"name":"Golgi vesicle","type":"related"},{"name":"vesicular component","type":"related"}],"termid":"GO:0005798","terms_by_termid":{"GO:0005798":null,"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030137":null,"GO:0030140":null,"GO:0030663":null,"GO:0034044":null}}


id: PR:000027626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:18951025","PomBase:MAH","PMID:16085489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"Spom-CDC14/UnMod","type":"exact"},{"name":"Spom-clp1/UnMod","type":"exact"},{"name":"clip1p unmodified","type":"related"},{"name":"flp1p unmodified","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 unmodified form (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027626"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: PBO:0048349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 60","termid":"PBO:0048349"}


id: PBO:0087672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Isw1b complex; exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing; contains a PHD finger motif; other complex members are Isw1p and Ioc4p","termid":"PBO:0087672"}


id: MONDO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare, generally benign, granular cell tumor that arises from the mediastinum. All the reported cases were located in the posterior mediastinum.","definition_xrefs":["NCIT:C6601"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinal neural neoplasm","termid":"MONDO:0003098"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal granular cell myoblastoma","secondary_identifiers":["DOID:5046","MEDGEN:235309","UMLS:C1334656"],"synonyms":[{"name":"granular cell myoblastoma of mediastinum","type":"exact"},{"name":"granular cell myoblastoma of the mediastinum","type":"exact"},{"name":"granular cell neoplasm of mediastinum","type":"exact"},{"name":"granular cell neoplasm of the mediastinum","type":"exact"},{"name":"granular cell tumor of mediastinum","type":"exact"},{"name":"granular cell tumor of the mediastinum","type":"exact"},{"name":"granular cell tumour of mediastinum","type":"exact"},{"name":"granular cell tumour of the mediastinum","type":"exact"},{"name":"mediastinal granular cell myoblastoma","type":"exact"},{"name":"mediastinal granular cell neoplasm","type":"exact"},{"name":"mediastinal granular cell tumor","type":"exact"},{"name":"mediastinal granular cell tumour","type":"exact"},{"name":"mediastinum granular cell tumor","type":"exact"},{"name":"mediastinum granular cell tumour","type":"exact"}],"termid":"MONDO:0003255","xrefs":{"Monarch":{"xref_id":"0003255"}}}


id: PBO:0072089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 20","termid":"PBO:0072089"}


id: GO:2001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran metabolic process","synonyms":[{"name":"methanofuran metabolism","type":"exact"}],"termid":"GO:2001119"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: PBO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 27","termid":"PBO:0062043"}


id: GO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule to an oligosaccharide, forming a beta-1,3-linkage.","definition_xrefs":["PMID:11551958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}


id: GO:0097361
data:
  {"annotated_genes":["SJAG_00040","SJAG_02497","SJAG_02895","SJAG_02866"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69541,73235,81134,88425],"is_not":false,"summary":null,"term":"GO:0097361"}]},"cv_name":"cellular_component","definition":"A protein complex capable of condensing two 2Fe-2S clusters into one 4Fe-4S center in the cytoplasm and nucleus. In humans it consists of MMS19, CIAO1, CIAO2A/CIAO2B, CIAO3. MMS19, CIAO1 and CIAO2A/CIAO2B form a tight 'core' complex, whereas CIAO3 is an 'external' component of this complex.","definition_xrefs":["PMID:23891004","PMID:23585563","PMID:34660592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytosolic [4Fe-4S] assembly targeting complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CIA complex","type":"broad"},{"name":"CIA targeting complex","type":"exact"},{"name":"cytosolic iron-sulfur protein assembly complex","type":"related"}],"termid":"GO:0097361","terms_by_termid":{"GO:0097361":null}}


id: PBO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13","termid":"PBO:0011098"}


id: MONDO:0011365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis-intellectual disability syndrome, SBBYS type is characterized by the association of congenital hypothyroidism, facial dysmorphism (microcephaly, blepharophimosis, a bulbous nose, thin lip, low-set ears and micrognathia), postaxial polydactyly and severe intellectual deficit. Less than 20 cases have been reported so far. Cryptorchidism is present in affected males. Some patients also have cardiac anomalies (interventricular communication), hypotonia and growth delay. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:3047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ohdo syndrome and variants","termid":"MONDO:0000734"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis - intellectual disability syndrome, SBBYS type","secondary_identifiers":["SCTID:699298009","ICD9:759.89","MESH:C536717","UMLS:C1863557","MEDGEN:350209","NANDO:1200681","DOID:0060290","GARD:16618","NANDO:2200982","OMIM:603736"],"synonyms":[{"name":"Ohdo syndrome, SBBYS variant","type":"exact"},{"name":"SBBYSS","type":"exact"},{"name":"SBBYSS syndrome","type":"exact"},{"name":"Say-Barber-Biesecker-Young-Simpson syndrome","type":"exact"},{"name":"Young-Simpson syndrome","type":"related"},{"name":"blepharophimosis - intellectual disability syndrome, SBBYS type","type":"exact"},{"name":"hypothyroidism-dysmorphism-postaxial polydactyly-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011365","xrefs":{"Monarch":{"xref_id":"0011365"}}}


id: MONDO:0014197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency due to MALT1 deficiency is a rare, genetic form of primary immunodeficiency characterized by growth retardation, early recurrent pulmonary infections leading to bronchiectasis, inflammatory gastrointestinal disease, and other symptoms, such as rash, dermatitis, skin infections.","definition_xrefs":["Orphanet:397964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to MALT1 deficiency","secondary_identifiers":["UMLS:C3809583","DOID:0111988","OMIM:615468","GARD:17647","MEDGEN:815913"],"synonyms":[{"name":"IMD12","type":"related"},{"name":"combined immunodeficiency due to MALT1 deficiency","type":"exact"},{"name":"immunodeficiency 12","type":"related"},{"name":"immunodeficiency type 12","type":"exact"}],"termid":"MONDO:0014197","xrefs":{"Monarch":{"xref_id":"0014197"}}}


id: GO:0102515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102515)","termid":"GO:0102515"}


id: FYPO:0000876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000876"}


id: GO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of vesicle location","synonyms":[{"name":"maintenance of vesicle localization","type":"related"}],"termid":"GO:0051655"}


id: PR:P87052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug10 gene.","definition_xrefs":["UniProtKB:P87052","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 10 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.04","synonyms":[{"name":"Spom972h-mug10","type":"exact"}],"termid":"PR:P87052"}


id: PR:Q9Y7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7R9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C306.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.11","synonyms":[{"name":"Spom972h-SPCC306.11","type":"exact"}],"termid":"PR:Q9Y7R9"}


id: PR:Q10334
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-pyruvate aminotransferase AlaA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.08","secondary_identifiers":["UniProtKB:Q10334"],"synonyms":[{"name":"GPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alaA","type":"exact"},{"name":"glutamate pyruvate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--alanine transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamic--pyruvic transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10334"}


id: GO:0009191
data:
  {"annotated_genes":["SJAG_03660","SJAG_01310","SJAG_00027","SJAG_02369","SJAG_04495","SJAG_04192","SJAG_06621","SJAG_02945","SJAG_03373","SJAG_03977","SJAG_04048","SJAG_02009","SJAG_06622","SJAG_02135","SJAG_02796","SJAG_02785","SJAG_00685","SJAG_03676","SJAG_03828","SJAG_00605","SJAG_00839","SJAG_04334","SJAG_02107","SJAG_00461","SJAG_05314","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112903],"is_not":false,"summary":null,"term":"GO:0009191"},{"annotations":[115952,79617,102911,108961,108965,97500,108967,103169,104999,108966,105370,94013,108963,108964,97771,108962,74194,105371,105000,105001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[77912,74846],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71770],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[78225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside diphosphate breakdown","type":"exact"},{"name":"ribonucleoside diphosphate catabolism","type":"exact"},{"name":"ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009191","terms_by_termid":{"GO:0006110":null,"GO:0006256":null,"GO:0009191":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: FYPO:0007775
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118870,119004,119008],"is_not":false,"summary":null,"term":"FYPO:0007775"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are longer than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01787":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"increased hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","pck1delta","atf1delta"],"synonyms":[{"name":"long hyphae","type":"exact"}],"termid":"FYPO:0007775","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007775":null,"FYPO_EXT:0000001":null}}


id: PBO:0089064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-dependent formaldehyde dehydrogenase","termid":"PBO:0089064"}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: GO:0047348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CTP = CDP-glycerol + diphosphate.","definition_xrefs":["RHEA:13361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"glycerol-3-phosphate cytidylyltransferase activity","secondary_identifiers":["EC:2.7.7.39","MetaCyc:2.7.7.39-RXN","KEGG_REACTION:R00856"],"synonyms":[{"name":"CDP-glycerol diphosphorylase activity","type":"related"},{"name":"CDP-glycerol pyrophosphorylase activity","type":"related"},{"name":"CTP:glycerol 3-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:glycerol-3-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:sn-glycerol-3-phosphate cytidylyltransferase activity","type":"related"},{"name":"Gro-PCT","type":"related"},{"name":"cytidine diphosphate glycerol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphorylase activity","type":"related"}],"termid":"GO:0047348"}


id: GO:0018906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl tert-butyl ether, 2-methoxy-2-methylpropane. Methyl tert-butyl ether is a synthetic chemical which is mixed with gasoline for use in reformulated gasoline. It was first introduced as an additive for unleaded gasoline in the 1980s. It is also used as a laboratory reagent and a pharmaceutical agent.","definition_xrefs":["UM-BBD_pathwayID:mtb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methyl tert-butyl ether metabolic process","synonyms":[{"name":"methyl tert-butyl ether metabolism","type":"exact"}],"termid":"GO:0018906"}


id: MONDO:0019149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lysosomal acid lipase deficiency characterized by progressive cholesterol esters and triglyceride accumulation in tissues and organs typically presenting with hepatosplenomegaly, liver dysfunction and/or dyslipidemia.","definition_xrefs":["Orphanet:75234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal acid lipase deficiency","termid":"MONDO:0800449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"cholesteryl ester storage disease","secondary_identifiers":["GARD:12099","SCTID:57218003","UMLS:C0008384","DOID:14502","icd11.foundation:894336362","NANDO:1200144","NANDO:2201233","NORD:929","OMIM:278000","MEDGEN:40266"],"synonyms":[{"name":"CESD","type":"related"},{"name":"LAL deficiency, partial","type":"exact"},{"name":"LIPA deficiency, partial","type":"exact"},{"name":"cholesterol ester hydrolase deficiency, partial","type":"exact"},{"name":"cholesterol ester storage disease","type":"exact"},{"name":"lysosomal acid lipase deficiency, partial","type":"exact"},{"name":"lysosomal and lipase deficiency","type":"related"}],"termid":"MONDO:0019149","xrefs":{"Monarch":{"xref_id":"0019149"}}}


id: FYPO:0000584
data:
  {"alleles_by_uniquename":{"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118762],"is_not":false,"summary":null,"term":"FYPO:0000584"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02819":null},"genotype_count":1,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased sporulation frequency","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_02819"],"single_locus_genotype_uniquenames":["efc25delta"],"synonyms":[{"name":"decreased frequency of ascospore formation","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"decreased sporulation","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"reduced sporulation frequency","type":"exact"},{"name":"sporulation: decreased","type":"related"}],"termid":"FYPO:0000584","terms_by_termid":{"FYPO:0000584":null,"FYPO_EXT:0000002":null}}


id: PBO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, rrm type","termid":"PBO:0005695"}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: GO:1900391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cAMP-mediated signaling.","definition_xrefs":["PMID:15448137","GOC:TermGenie","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900391)","synonyms":[{"name":"regulation of cAMP-mediated signalling by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900391"}


id: PBO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_leucine","termid":"PBO:0031583"}


id: FYPO:0002252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter and volume than the other compartment).","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000004","FYPO:0000005","FYPO:0000641","FYPO:0001985","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with normally localized septum with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable large elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localised septum","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally positioned septum","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with normally localized septum","type":"exact"},{"name":"long swollen mononucleate cell with normally localized septum","type":"exact"},{"name":"swollen elongated mononucleate cell with normal septum position","type":"narrow"},{"name":"swollen elongated mononucleate cell with normally localized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with normally placed septum","type":"exact"}],"termid":"FYPO:0002252"}


id: FYPO:0006586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abolished, and the protein is instead detected distributed over a greater area of the plasma membrane than normal.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein abnormally dispersed at shmoo tip","termid":"FYPO:0006386"},{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip membrane, with protein distributed in plasma membrane","synonyms":[{"name":"abolished protein localisation to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to plasma membrane at shmoo tip, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo membrane fusion domain, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo projection membrane, with protein distributed in plasma membrane","type":"related"},{"name":"protein localization to shmoo tip membrane abolished, with protein distributed in plasma membrane","type":"related"}],"termid":"FYPO:0006586"}


id: MONDO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of carnitine cycle and carnitine transport","secondary_identifiers":["NANDO:1200969","GARD:21320","Orphanet:309130","icd11.foundation:890605309","UMLS:C5681080","MEDGEN:1842227"],"termid":"MONDO:0017716","xrefs":{"Monarch":{"xref_id":"0017716"}}}


id: PBO:0041843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 23","termid":"PBO:0041843"}


id: GO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"MHC class Ib protein complex assembly","termid":"GO:0002398"}


id: PBO:0068659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 40, pseudogene","termid":"PBO:0068659"}


id: PBO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 160","termid":"PBO:0061688"}


id: PBO:0060461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 4","termid":"PBO:0060461"}


id: PBO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 28","termid":"PBO:0071890"}


id: GO:1905557
data:
  {"annotated_genes":["SJAG_00680","SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93315,103193],"is_not":false,"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GO_REF:0000058","PMID:18765790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane disassembly","termid":"GO:0010549"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic nuclear envelope disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905557","terms_by_termid":{"GO:1905557":null}}


id: PBO:0060848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 2","termid":"PBO:0060848"}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie","PMID:21472453","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: MONDO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","secondary_identifiers":["icd11.foundation:186534168","Orphanet:90642","SCTID:232333009"],"synonyms":[{"name":"obsolete syndromic genetic hearing loss","type":"exact"},{"name":"syndromic genetic deafness","type":"narrow"},{"name":"syndromic hearing loss","type":"broad"}],"termid":"MONDO:0019589","xrefs":{"Monarch":{"xref_id":"0019589"}}}


id: PBO:0011088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase (predicted)","termid":"PBO:0011088"}


id: SO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that has been validated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"validated","termid":"SO:0000789"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"validated_cDNA_clone","synonyms":[{"name":"validated cDNA clone","type":"exact"}],"termid":"SO:0000808"}


id: MONDO:0022423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-2 deficient collagen disease (obsolete MONDO:0022423)","termid":"MONDO:0022423","xrefs":{"Monarch":{"xref_id":"0022423"}}}


id: GO:1990757
data:
  {"annotated_genes":["SJAG_03809","SJAG_00666","SJAG_04853","SJAG_00071","SJAG_03858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78351,80885,80911,81736,82174],"is_not":false,"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin ligase.","definition_xrefs":["GOC:dph","PMID:25619242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activator activity","termid":"GO:0097027"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"ubiquitin ligase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0061636"],"synonyms":[{"name":"mitotic anaphase-promoting complex activator activity","type":"narrow"}],"termid":"GO:1990757","terms_by_termid":{"GO:1990757":null}}


id: PBO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitosis","termid":"PBO:0035779"}


id: PBO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc25","termid":"PBO:0004117"}


id: GO:0043998
data:
  {"annotated_genes":["SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75792],"is_not":false,"summary":null,"term":"GO:0043998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine = CoA + histone H2A N6-acetyl-L-lysine.","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0034212","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H2A acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"H2A histone acetylase activity","type":"exact"},{"name":"H2A histone acetyltransferase activity","type":"exact"},{"name":"H2A histone lysine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0043998","terms_by_termid":{"GO:0043998":null}}


id: PBO:0078781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 6-1","termid":"PBO:0078781"}


id: GO:0009880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the patterns of cell differentiation that will arise in an embryo.","definition_xrefs":["ISBN:0521436125","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pattern specification","synonyms":[{"name":"embryonic pattern biosynthesis","type":"broad"},{"name":"embryonic pattern formation","type":"broad"},{"name":"ventral/lateral system","type":"related"}],"termid":"GO:0009880"}


id: FYPO:0003600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased rRNA precursor level","synonyms":[{"name":"increased rRNA precursor accumulation","type":"related"},{"name":"increased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003600"}


id: MONDO:0009728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive tubulointerstitial nephritis inherited in an autosomal recessive manner. It is caused by mutations in the NPHP1 gene. Patients present with anemia, polyuria, and polydipsia during childhood. The progressive bilateral kidney damage results in renal failure.","definition_xrefs":["NCIT:C74998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 1","secondary_identifiers":["OMIM:256100","MESH:C537699","NANDO:2200140","Orphanet:93592","UMLS:C1855681","NANDO:1201036","MEDGEN:343406","GARD:18645","DOID:0111112","SCTID:444830001"],"synonyms":[{"name":"NPH1","type":"exact"},{"name":"NPHP1","type":"exact"},{"name":"NPHP1 nephronophthisis (disease)","type":"exact"},{"name":"Nph1","type":"related"},{"name":"familial juvenile nephronophthisis","type":"exact"},{"name":"juvenile nephronophthisis","type":"exact"},{"name":"juvenile nephronophthisis 1","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in NPHP1","type":"exact"},{"name":"nephronophthisis 1","type":"exact"},{"name":"nephronophthisis 1, juvenile","type":"exact"},{"name":"nephronophthisis type 1","type":"exact"},{"name":"nephronophthisis, familial juvenile","type":"related"}],"termid":"MONDO:0009728","xrefs":{"Monarch":{"xref_id":"0009728"}}}


id: PBO:0038561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3","termid":"PBO:0038561"}


id: FYECO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ caspofungin SLD","termid":"FYECO:0000393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin LD","termid":"FYECO:0000394"}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: MONDO:0017667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A diffuse palmoplantar keratoderma that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated diffuse palmoplantar keratoderma (obsolete MONDO:0017667)","secondary_identifiers":["Orphanet:307148"],"synonyms":[{"name":"isolated diffuse PPK","type":"exact"},{"name":"isolated diffuse keratosis palmoplantaris","type":"exact"},{"name":"isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"nonsyndromic diffuse palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0017667","xrefs":{"Monarch":{"xref_id":"0017667"}}}


id: PBO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIb-related protein (predicted)","termid":"PBO:0008966"}


id: GO:1902977
data:
  {"annotated_genes":["SJAG_02607","SJAG_04995","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73746,80051,57361],"is_not":false,"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"Any DNA replication preinitiation complex assembly that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_02607":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0044085","GO:0065003","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"DNA replication preinitiation complex formation involved in mitotic cell cycle","type":"exact"},{"name":"pre-IC complex assembly involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1902977","terms_by_termid":{"GO:1902977":null}}


id: PBO:0038821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 24, pseudogene","termid":"PBO:0038821"}


id: GO:0110148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process where mineral crystals are formed and deposited in an organized fashion in a matrix (either cellular or extracellular) by living organisms. This gives rise to inorganic compound-based structures such as skeleton, teeth, ivory, shells, cuticle, and corals as well as bacterial biomineralization products.","definition_xrefs":["PMID:24395694","PMID:28229486","GOC:aa"],"gene_count":0,"genotype_count":0,"name":"obsolete biomineralization (obsolete GO:0110148)","secondary_identifiers":["Wikipedia:Biomineralization"],"synonyms":[{"name":"biomineral formation","type":"narrow"},{"name":"biomineralisation","type":"exact"},{"name":"mineralisation","type":"exact"},{"name":"mineralization","type":"exact"}],"termid":"GO:0110148"}


id: PBO:0058589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6722","termid":"PBO:0058589"}


id: PBO:0060282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 pseudogene","termid":"PBO:0060282"}


id: PBO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2424","termid":"PBO:0055009"}


id: SO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding RNA which is produced using the promoter of a protein-coding gene but with transcription occurring in the opposite direction.","definition_xrefs":["PMID:30175284","PMID:34956340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA","synonyms":[{"name":"bidirectional lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter long non-coding RNA","type":"exact"},{"name":"bidirectional_lncRNA","type":"exact"},{"name":"bidirectional_promoter_long_non-coding_RNA","type":"exact"}],"termid":"SO:0002381"}


id: PBO:0086976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation","termid":"PBO:0086976"}


id: GO:0030886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"},{"relation_name":"negatively_regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid dendritic cell activation","synonyms":[{"name":"down regulation of myeloid dendritic cell activation","type":"exact"},{"name":"down-regulation of myeloid dendritic cell activation","type":"exact"},{"name":"downregulation of myeloid dendritic cell activation","type":"exact"},{"name":"inhibition of myeloid dendritic cell activation","type":"narrow"}],"termid":"GO:0030886"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-lysine N2-acetylation (obsolete GO:0017195)","termid":"GO:0017195"}


id: FYPO:0004407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to triplatin tetranitrate (also called BBR 3464). Cells stop growing (and may die) at a concentration of triplatin tetranitrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to triplatin tetranitrate","synonyms":[{"name":"hypersensitive to triplatin tetranitrate","type":"exact"},{"name":"sensitive to BBR 3464","type":"exact"},{"name":"sensitive to triplatin tetranitrate during mitotic cell cycle","type":"related"},{"name":"sensitive to triplatin tetranitrate during vegetative growth","type":"exact"}],"termid":"FYPO:0004407"}


id: GO:0042579
data:
  {"annotated_genes":["SJAG_01165","SJAG_02693","SJAG_02384","SJAG_03166","SJAG_00326","SJAG_00947","SJAG_03324","SJAG_00702","SJAG_02247","SJAG_02848","SJAG_04299","SJAG_02630","SJAG_03715","SJAG_05950","SJAG_04467","SJAG_00706","SJAG_01474","SJAG_03091","SJAG_04428","SJAG_01685","SJAG_02496","SJAG_03464","SJAG_04823","SJAG_04315","SJAG_03440","SJAG_00891","SJAG_02619","SJAG_03671","SJAG_00114","SJAG_04146","SJAG_03493","SJAG_02997","SJAG_04763","SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72409,115362,117917,104849,114344,61540,111429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[114899,77646,73499,79537,75470,106241,82141,79909,81448,80276,98077,77290,72435,75077,96460,115363,89891,117792,59290],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005778"},{"annotations":[78054,75379,81583,99356,113529,73315,76065,72004,74151,109187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005777"}]},"cv_name":"cellular_component","definition":"Cytoplasmic organelles, spherical or oval in shape, that are bounded by a single membrane and contain oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microbody"],"termid":"GO:0042579","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: GO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate metabolic process (obsolete GO:0010675)","termid":"GO:0010675"}


id: PBO:0075435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member D","termid":"PBO:0075435"}


id: MONDO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripheral T-cell lymphoma (obsolete MONDO:0000434)","termid":"MONDO:0000434","xrefs":{"Monarch":{"xref_id":"0000434"}}}


id: PR:G2TRS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.20","synonyms":[{"name":"Spom972h-new14","type":"exact"}],"termid":"PR:G2TRS1"}


id: GO:0051601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an exocyst is transported to, or maintained in, a specific location. An exocyst is a protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"exocyst localization","synonyms":[{"name":"establishment and maintenance of exocyst localization","type":"exact"},{"name":"exocyst localisation","type":"exact"}],"termid":"GO:0051601"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["UniProtKB:Q9Y820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: PBO:0072686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNDC3A antisense RNA 1","termid":"PBO:0072686"}


id: GO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a tachykinin neuropeptide and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:ai","PMID:7639617","GOC:bf","Wikipedia:Tachykinin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"tachykinin receptor activity","termid":"GO:0004995"}


id: MONDO:0008430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia with delayed epiphyseal and carpal bone ossification","secondary_identifiers":["MESH:C566687","OMIM:182255","UMLS:C1866939","MEDGEN:356650"],"synonyms":[{"name":"skeletal dysplasia with delayed epiphyseal and carpal bone ossification","type":"exact"}],"termid":"MONDO:0008430","xrefs":{"Monarch":{"xref_id":"0008430"}}}


id: FYPO:0007786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell is longer than normal, and progression through the meiotic cell cycle is arrested at the G2/MI phase transition. A cell can elongate when arrested at the G2/MI transition if it overcomes the growth arrest that usually occurs.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at meiotic G2/MI transition","termid":"FYPO:0007785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"elongated cell with cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"elongated cell with abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"elongated cells during meiotic G2/M1 arrest","type":"exact"},{"name":"elongated cells during meiotic G2/MI arrest","type":"exact"},{"name":"long cell with cell cycle arrest at meiotic G2/MI transition","type":"exact"}],"termid":"FYPO:0007786"}


id: GO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (obsolete GO:0060775)","termid":"GO:0060775"}


id: MONDO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Powassan virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Powassan encephalitis","secondary_identifiers":["ICD9:063.8","MEDGEN:18601","UMLS:C0032858","icd11.foundation:1674038791","SCTID:416707008","DOID:0050179"],"synonyms":[{"name":"Powassan virus caused disease or disorder","type":"exact"},{"name":"Powassan virus disease or disorder","type":"exact"},{"name":"Powassan virus infectious disease","type":"exact"},{"name":"encephalitis, powassan","type":"related"},{"name":"powassan encephalitis virus infection","type":"exact"}],"termid":"MONDO:0000276","xrefs":{"Monarch":{"xref_id":"0000276"}}}


id: GO:0050097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: threo-3-methyl-L-aspartate = L-glutamate.","definition_xrefs":["EC:5.4.99.1","RHEA:12857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylaspartate mutase activity","secondary_identifiers":["KEGG_REACTION:R00262","MetaCyc:METHYLASPARTATE-MUTASE-RXN"],"synonyms":[{"name":"L-threo-3-methylaspartate carboxy-aminomethylmutase activity","type":"related"},{"name":"b-methylaspartate-glutamate mutase activity","type":"related"},{"name":"beta-methylaspartate-glutamate mutase activity","type":"related"},{"name":"glutamate isomerase activity","type":"related"},{"name":"glutamate mutase activity","type":"related"},{"name":"glutamic acid isomerase activity","type":"related"},{"name":"glutamic acid mutase activity","type":"related"},{"name":"glutamic isomerase activity","type":"related"},{"name":"glutamic mutase activity","type":"related"},{"name":"methylaspartic acid mutase activity","type":"related"}],"termid":"GO:0050097"}


id: PBO:0079479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin alpha","termid":"PBO:0079479"}


id: MONDO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mitochondrial DNA (mtDNA) depletion syndrome (MDS) is a clinically heterogeneous group of mitochondrial disorders characterized by a reduction of the mtDNA copy number in affected tissues without mutations or rearrangements in the mtDNA. MDS is phenotypically heterogeneous, and can affect a specific organ or a combination of organs, with the main presentations described being either hepatocerebral (i.e. hepatic dysfunction, psychomotor delay), myopathic (i.e. hypotonia, muscle weakness, bulbar weakness), encephalomyopathic (i.e. hypotonia, muscle weakness, psychomotor delay) or neurogastrointestinal (i.e gastrointestinal dysmotility, peripheral neuropathy). Additional phenotypes include fatal infantile lactic acidosis with methylmalonic aciduria, spastic ataxia (early-onset spastic ataxia-neuropathy syndrome), and Alpers syndrome.","definition_xrefs":["Orphanet:35698"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disorder with intestinal involvement (obsolete MONDO:0015188)","termid":"MONDO:0015188"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome","secondary_identifiers":["OMIMPS:603041","MedDRA:10059396","icd11.foundation:1159345506","NANDO:2200523","DOID:0070329","NANDO:2200528","MEDGEN:452449","GARD:13643","UMLS:C0342782"],"synonyms":[{"name":"mtDNA depletion syndrome","type":"exact"}],"termid":"MONDO:0018158","xrefs":{"Monarch":{"xref_id":"0018158"}}}


id: GO:0042667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate specification","synonyms":[{"name":"auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042667"}


id: MONDO:0017916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pure or complex X-linked spastic paraplegia (obsolete MONDO:0017916)","secondary_identifiers":["Orphanet:320350"],"synonyms":[{"name":"Pure or complicated X-linked spastic paraplegia","type":"exact"}],"termid":"MONDO:0017916","xrefs":{"Monarch":{"xref_id":"0017916"}}}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: MONDO:0015375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Two syndromes of oral, facial, and digital malformations. Type I (Papillon-Leage and Psaume syndrome, Gorlin-Psaume syndrome) is inherited as an X-linked dominant trait and is found only in females and XXY males. Type II (Mohr syndrome) is inherited as an autosomal recessive trait.","definition_xrefs":["MESH:D009958"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"oromandibular-limb anomalies syndrome","termid":"MONDO:0015498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome","secondary_identifiers":["DOID:4501","GARD:10692","icd11.foundation:1405407847","MEDGEN:14518","OMIMPS:311200","Orphanet:140997","SCTID:52868006","ICD9:759.89","NANDO:1201051","NORD:1529","UMLS:C0029294"],"synonyms":[{"name":"OFD","type":"exact"},{"name":"Oral-Facial-Digital Syndrome","type":"exact"},{"name":"oral facial digital syndromes","type":"related"},{"name":"oral-facial-digital syndrome","type":"exact"},{"name":"oral-facial-digital syndromes","type":"related"},{"name":"orofaciodigital syndrome","type":"exact"},{"name":"orofaciodigital syndromes","type":"related"}],"termid":"MONDO:0015375","xrefs":{"Monarch":{"xref_id":"0015375"}}}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: PBO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 4","termid":"PBO:0052208"}


id: PBO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_metabolic_process","termid":"PBO:0030985"}


id: MONDO:0015345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perioral myoclonia with absences is a rare epilepsy syndrome characterized by absence seizures with perioral myoclonia as the main seizure type, accompanied by generalized tonic-clonic seizures, appearing before or together with absences. Consciousness is usually impaired, although to variable degree. Commonly observed absence status epilepticus, poor response to antiepileptic drugs and persistence of seizures into adulthood, in the presence of normal neurological status and intelligence, are additional clinical features of this syndrome.","definition_xrefs":["Orphanet:139426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"perioral myoclonia with absences","secondary_identifiers":["UMLS:C4707846","GARD:19915","MEDGEN:1637328","icd11.foundation:1067045592","SCTID:766815007"],"synonyms":[{"name":"POMA","type":"exact"}],"termid":"MONDO:0015345","xrefs":{"Monarch":{"xref_id":"0015345"}}}


id: FYPO:0002111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable tapered cell","termid":"FYPO:0002109"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable tapered vegetative cell","synonyms":[{"name":"inviable bottle-shaped vegetative cell","type":"exact"},{"name":"inviable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable bottle/skittle vegetative cell","type":"exact"},{"name":"inviable skittle-shaped vegetative cell","type":"exact"},{"name":"inviable tapered cell during vegetative growth","type":"exact"},{"name":"lethal; tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002111"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: GO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"positive regulation of neuron projection regeneration","termid":"GO:0070572"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon regeneration","synonyms":[{"name":"activation of axon regeneration","type":"narrow"},{"name":"stimulation of axon regeneration","type":"narrow"},{"name":"up regulation of axon regeneration","type":"exact"},{"name":"up-regulation of axon regeneration","type":"exact"},{"name":"upregulation of axon regeneration","type":"exact"}],"termid":"GO:0048680"}


id: PBO:0029896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint","termid":"PBO:0029896"}


id: FYECO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiolutin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiolutin","termid":"FYECO:0000373"}


id: GO:0008331
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76215],"is_not":false,"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a high voltage-gated channel. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","PMID:16382099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"L-type calcium channel","type":"related"},{"name":"N-type calcium channel","type":"related"},{"name":"P-type calcium channel","type":"related"},{"name":"Q-type calcium channel","type":"related"},{"name":"high voltage gated calcium channel activity","type":"exact"},{"name":"high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008331","terms_by_termid":{"GO:0008331":null}}


id: PBO:0017906
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSuppressor for K-252a Sensitivity","termid":"PBO:0017906"}


id: PBO:0075806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 5, pseudogene","termid":"PBO:0075806"}


id: GO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:pf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell-substrate adhesion","termid":"GO:0010810"}


id: GO:0103106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: brassinolide + UDP-alpha-D-glucose = brassinolide-23-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete brassinolide 23-O-glucosyltransferase activity (obsolete GO:0103106)","termid":"GO:0103106"}


id: PBO:0116996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GZMH and GMZB antisense RNA 1","termid":"PBO:0116996"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: FYPO:0007257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007257"}


id: MONDO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"equatorial staphyloma","secondary_identifiers":["icd11.foundation:120412682","ICD9:379.13","SCTID:82146006","UMLS:C0155361","MEDGEN:509935","DOID:13788"],"termid":"MONDO:0001800","xrefs":{"Monarch":{"xref_id":"0001800"}}}


id: MOD:01462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-proline alpha imino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated proline","termid":"MOD:01462"}


id: FYPO:0000834
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118972,118971,118973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell differs from normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered protein level","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein level","type":"exact"},{"name":"altered cellular protein level","type":"exact"},{"name":"protein/peptide accumulation: abnormal","type":"related"}],"termid":"FYPO:0000834","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0082378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication","termid":"PBO:0082378"}


id: PBO:0078474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone degrading enzyme","termid":"PBO:0078474"}


id: PBO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase alpha","termid":"PBO:0042438"}


id: MONDO:0022941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness hypospadias metacarpal and metatarsal syndrome","termid":"MONDO:0022941","xrefs":{"Monarch":{"xref_id":"0022941"}}}


id: GO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + UDP-alpha-D-glucose = p-aminobenzoate-beta-D-glucopyranosyl ester + UDP.","definition_xrefs":["PMID:18385129","MetaCyc:RXN-6142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:4-aminobenzoate acylglucosyltransferase activity","synonyms":[{"name":"UDP-glucose:p-aminobenzoate acylglucosyltransferase activity","type":"related"},{"name":"UDP-glucose:p-aminobenzoate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:pABA acylglucosyltransferase activity","type":"related"}],"termid":"GO:0080002"}


id: PBO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 28","termid":"PBO:0071610"}


id: PBO:0072641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphate and 5'-OH ligase","termid":"PBO:0072641"}


id: PBO:0073104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive DNAJB4 interacting membrane protein 1","termid":"PBO:0073104"}


id: MONDO:0016478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to 11p15 translocation/inversion","secondary_identifiers":["MEDGEN:1826105","Orphanet:231130","UMLS:C5680920","GARD:20602"],"termid":"MONDO:0016478","xrefs":{"Monarch":{"xref_id":"0016478"}}}


id: GO:0009339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).","definition_xrefs":["PMID:4557653","PMID:8606183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycolate oxidase complex","termid":"GO:0009339"}


id: GO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylate + NADH + O2 + H+ = 2,5-dihydroxybenzoate + NAD+ + H2O.","definition_xrefs":["RHEA:35307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"salicylate 5-hydroxylase (NADH) activity","secondary_identifiers":["UM-BBD_reactionID:r1034","MetaCyc:RXN-10446","EC:1.14.13.172"],"termid":"GO:0034785"}


id: MONDO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital smooth muscle hamartoma (CSMH) is a rare cutaneous hamartomatous lesion most often located on the lumbosacral area or proximal limbs (but rarely on atypical areas such as scalp, eyelid or foot) and characterized by a disorganized proliferation of smooth muscle fibers of arrector pili presenting usually as a localized skin-colored or hyperpigmented plaque (up to 10 cm in diameter) with prominent vellus hairs (most common classic form) or less commonly by multiple skin-colored papules that can coalesce to form irregularly shaped plaques. With time, hyperpigmentation and vellus hairs usually diminish and neither malignant transformation nor associated systemic involvement has been reported.","definition_xrefs":["Orphanet:263435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma","secondary_identifiers":["SCTID:239144007","UMLS:C0406819","ICD9:759.6","GARD:20902","MEDGEN:590701"],"termid":"MONDO:0016986","xrefs":{"Monarch":{"xref_id":"0016986"}}}


id: GO:0035648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fluctuation in mating behavior that occurs over an approximately 24 hour cycle.","definition_xrefs":["PMID:17276917","GOC:bf","GOC:dos","PMID:11470898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian mating behavior","synonyms":[{"name":"circadian mating behaviour","type":"exact"},{"name":"circadian mating rhythm","type":"exact"}],"termid":"GO:0035648"}


id: GO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential","type":"narrow"}],"termid":"GO:0086090"}


id: MONDO:1011852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenic muscular atrophy, non-human animal","secondary_identifiers":["OMIA:000719"],"termid":"MONDO:1011852","xrefs":{"Monarch":{"xref_id":"1011852"}}}


id: GO:2001192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation involved in immune response","termid":"GO:2001191"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"negative regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001192"}


id: PBO:0039165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 8","termid":"PBO:0039165"}


id: PBO:0084689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cruciform cutting endonuclease; cleaves Holliday junctions formed during recombination of mitochondrial DNA; CCE1 has a paralog, MRS1, that arose from the whole genome duplication","termid":"PBO:0084689"}


id: PBO:0087274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET-domain lysine-N-methyltransferase; catalyzes the formation of dimethyllysine residues on the large ribosomal subunit proteins L23 (Rpl23Ap and Rpl23Bp) and monomethyllysine residues on L18 (Rps18Ap and Rps18Bp)","termid":"PBO:0087274"}


id: PBO:0065843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB10, member RAS oncogene family","termid":"PBO:0065843"}


id: MONDO:0007701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial heart block","termid":"MONDO:0019490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block type II","secondary_identifiers":["SCTID:698251009","DOID:0111075","GARD:4879","ICD9:426.6","OMIM:140400","MESH:C564202","UMLS:C1841658","MEDGEN:333884"],"synonyms":[{"name":"PFHB2","type":"exact"},{"name":"PFHBII","type":"related"},{"name":"heart block progressive familial type 2","type":"related"},{"name":"progressive familial heart block type 2","type":"related"},{"name":"progressive familial heart block, type II","type":"related"}],"termid":"MONDO:0007701","xrefs":{"Monarch":{"xref_id":"0007701"}}}


id: MOD:00598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-hydroxyethyl)cysteine","definition_xrefs":["PubMed:15351294","Unimod:278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-hydroxyethyl)cysteine","synonyms":[{"name":"Ethanolation of Cys","type":"related"},{"name":"Ethanolyl","type":"related"}],"termid":"MOD:00598"}


id: PBO:0034311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_II_bouton_to","termid":"PBO:0034311"}


id: PBO:0066435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RE1 silencing transcription factor","termid":"PBO:0066435"}


id: GO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell within the dorsal ectoderm becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf","GOC:go_curators","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate determination","termid":"GO:0035028"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate determination","termid":"GO:0007393"}


id: GO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of entry into host (obsolete GO:0052374)","synonyms":[{"name":"down regulation by symbiont of entry into host","type":"exact"},{"name":"down-regulation by symbiont of entry into host","type":"exact"},{"name":"downregulation by symbiont of entry into host","type":"exact"},{"name":"inhibition by symbiont of entry into host","type":"narrow"}],"termid":"GO:0052374"}


id: MONDO:0007783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant hyperthermia of anesthesia in which the cause of the disease is a mutation in the RYR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant hyperthermia of anesthesia","termid":"MONDO:0018493"},{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 1","secondary_identifiers":["DOID:0080990","MEDGEN:443948","UMLS:C2930980","OMIM:145600","MESH:C535694"],"synonyms":[{"name":"King syndrome","type":"related"},{"name":"King-Denborough syndrome","type":"related"},{"name":"King-Denborough syndrome, included","type":"related"},{"name":"MHS","type":"related"},{"name":"MHS1","type":"related"},{"name":"RYR1 malignant hyperthermia of anaesthesia","type":"exact"},{"name":"RYR1 malignant hyperthermia of anesthesia","type":"exact"},{"name":"hyperpyrexia, malignant","type":"related"},{"name":"hyperpyrexia, malignant;MH KING syndrome, included","type":"related"},{"name":"hyperthermia of anaesthesia","type":"related"},{"name":"hyperthermia of anesthesia","type":"related"},{"name":"malignant hyperthermia of anaesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia of anesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia susceptibility 1","type":"exact"},{"name":"malignant hyperthermia susceptibility type 1","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 1","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to malignant hyperthermia 1","type":"related"}],"termid":"MONDO:0007783","xrefs":{"Monarch":{"xref_id":"0007783"}}}


