# terms

id: GO:0102342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA + NADP = 3-oxohexacosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA reductase activity (obsolete GO:0102342)","termid":"GO:0102342"}


id: GO:1904568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a wortmannin stimulus.","definition_xrefs":["PMID:20629186","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to wortmannin","termid":"GO:1904567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to wortmannin","synonyms":[{"name":"cellular response to wartmannin","type":"exact"}],"termid":"GO:1904568"}


id: GO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"positive regulation of TLR3 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034141"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy","termid":"PBO:0001110"}


id: PBO:0046398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 4A","termid":"PBO:0046398"}


id: PBO:0086614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086614"}


id: PBO:0069309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 565, pseudogene","termid":"PBO:0069309"}


id: PBO:0052081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 6","termid":"PBO:0052081"}


id: PBO:0076002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal interaction molecule 1","termid":"PBO:0076002"}


id: PBO:0054506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1906","termid":"PBO:0054506"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107862],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: MONDO:0019254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of purine or pyrimidine metabolism","secondary_identifiers":["ICD9:277.2","MedDRA:10037546","Orphanet:79224","UMLS:C0034139","DOID:653","MESH:D011686","MEDGEN:48263","GARD:18980"],"synonyms":[{"name":"disorder of purine or pyrimidine metabolism","type":"related"},{"name":"inborn errors of purine-pyrimidine metabolism","type":"exact"},{"name":"inborn purine-pyrimidine metabolic disorder","type":"exact"},{"name":"purine-pyrimidine metabolic disorder","type":"related"}],"termid":"MONDO:0019254","xrefs":{"Monarch":{"xref_id":"0019254"}}}


id: GO:1990134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic process in a palatal shelf epithelial cell that contributes to the shaping of the palatal shelf.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","PMID:16607638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process involved in palatal shelf morphogenesis","termid":"GO:1990134"}


id: GO:0035284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the brain into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"central nervous system segmentation","termid":"GO:0035283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain segmentation","termid":"GO:0035284"}


id: PBO:0047593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen like 2","termid":"PBO:0047593"}


id: PBO:0038552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 7","termid":"PBO:0038552"}


id: GO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + 2 H2O = indole-3-acetic acid + NH3.","definition_xrefs":["RHEA:45776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrilase activity","secondary_identifiers":["MetaCyc:RXN-1404"],"termid":"GO:0080061"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: PBO:0040987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 1","termid":"PBO:0040987"}


id: PBO:0017529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3 (prediected)","termid":"PBO:0017529"}


id: GO:0036087
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96516],"is_not":false,"summary":null,"term":"GO:0036087"}]},"cv_name":"cellular_component","definition":"A protein complex composed of two or more polypeptide subunits, and which possesses glutathione synthase activity (catalysis of the reaction: L-gamma-glutamyl-L-cysteine + ATP + glycine = ADP + glutathione + 2 H+ + phosphate). In eukaryotes, the complex is homodimeric, in E. coli glutathione synthase exists as a tetramer, and in S. pombe the complex exists as a homodimer or a heterotetramer.","definition_xrefs":["PMID:12734194","GOC:al","PMID:14990577","PMID:1958212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutathione synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione synthetase complex","type":"exact"}],"termid":"GO:0036087","terms_by_termid":{"GO:0036087":null}}


id: PBO:0111940
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0111940"}


id: PBO:0046050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 3","termid":"PBO:0046050"}


id: GO:0016646
data:
  {"annotated_genes":["SJAG_01061","SJAG_02388","SJAG_04156","SJAG_01466","SJAG_01668","SJAG_01126","SJAG_01198","SJAG_00120","SJAG_03712","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004146"},{"annotations":[87161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036382"},{"annotations":[72191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004487"},{"annotations":[77469,57825,78356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004488"},{"annotations":[97913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[96149,97914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"},{"annotations":[79648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004735"},{"annotations":[57498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004754"},{"annotations":[109270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00120":null,"SJAG_01061":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01668":null,"SJAG_02388":null,"SJAG_03712":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.-"],"termid":"GO:0016646","terms_by_termid":{"GO:0004146":null,"GO:0004487":null,"GO:0004488":null,"GO:0004735":null,"GO:0004754":null,"GO:0004755":null,"GO:0036382":null,"GO:0106312":null,"GO:0106313":null}}


id: MONDO:0015014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","secondary_identifiers":["Orphanet:603494","GARD:18021","UMLS:C4310625","MEDGEN:934592","OMIM:617306"],"synonyms":[{"name":"COMMAD","type":"exact"},{"name":"COMMAD syndrome","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness","type":"exact"},{"name":"coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness; COMMAD","type":"exact"}],"termid":"MONDO:0015014","xrefs":{"Monarch":{"xref_id":"0015014"}}}


id: FYPO:0003378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, does not occur.","definition_xrefs":["GO:0007127","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiosis I","synonyms":[{"name":"abolished first meiotic nuclear division","type":"exact"},{"name":"absent meiosis I","type":"exact"},{"name":"meiosis I abolished","type":"exact"},{"name":"meiosis I: absent","type":"exact"}],"termid":"FYPO:0003378"}


id: PBO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.3","termid":"PBO:0002524"}


id: MONDO:0015943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic granulomatosis with polyangiitis (EGPA), previously known as Churg-Strauss syndrome, is a systemic vasculitis of small-to medium vessels, characterized by asthma, transient pulmonary infiltrates, and hypereosinophilia.","definition_xrefs":["Orphanet:183"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-familial rare disease with dilated cardiomyopathy (obsolete MONDO:0017952)","termid":"MONDO:0017952"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"granulomatosis with polyangiitis","termid":"MONDO:0012105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic granulomatosis with polyangiitis","secondary_identifiers":["UMLS:C0008728","GARD:6111","DOID:3049","icd11.foundation:835880885","EFO:0007208","MESH:D015267","NCIT:C34481","NANDO:2200427","MEDGEN:3088","SCTID:82275008","NANDO:1200264","MedDRA:10048594","NORD:973"],"synonyms":[{"name":"CSS","type":"exact"},{"name":"Churg Strauss Syndrome","type":"exact"},{"name":"Churg Strauss syndrome","type":"exact"},{"name":"Churg-Strauss syndrome","type":"exact"},{"name":"Churg-Strauss vasculitis","type":"exact"},{"name":"EGPA","type":"exact"},{"name":"allergic angiitides","type":"exact"},{"name":"allergic angiitides, granulomatous","type":"exact"},{"name":"allergic angiitis","type":"exact"},{"name":"allergic angiitis and granulomatosis","type":"exact"},{"name":"allergic angiitis, granulomatous","type":"exact"},{"name":"allergic granulomatoses","type":"exact"},{"name":"allergic granulomatosis","type":"exact"},{"name":"allergic granulomatosis angiitis","type":"exact"},{"name":"allergic granulomatous Angiitides","type":"exact"},{"name":"allergic granulomatous and angiitis","type":"exact"},{"name":"allergic granulomatous angiitis","type":"exact"},{"name":"angiitides, allergic","type":"exact"},{"name":"angiitides, allergic granulomatous","type":"exact"},{"name":"angiitides, granulomatous allergic","type":"exact"},{"name":"angiitis, allergic","type":"exact"},{"name":"angiitis, allergic granulomatous","type":"exact"},{"name":"angiitis, granulomatous allergic","type":"exact"},{"name":"eosinophilic granulomatous Vasculitides","type":"exact"},{"name":"eosinophilic granulomatous vasculitis","type":"exact"},{"name":"granulomatoses, allergic","type":"exact"},{"name":"granulomatosis, allergic","type":"exact"},{"name":"granulomatous allergic Angiitides","type":"exact"},{"name":"granulomatous allergic angiitis","type":"exact"},{"name":"granulomatous angiitides, allergic","type":"exact"},{"name":"granulomatous angiitis, allergic","type":"exact"},{"name":"granulomatous vasculitides, eosinophilic","type":"exact"},{"name":"granulomatous vasculitis, eosinophilic","type":"exact"},{"name":"syndrome, Churg-Strauss","type":"exact"},{"name":"vasculitides, eosinophilic granulomatous","type":"exact"},{"name":"vasculitis, Churg Strauss","type":"exact"},{"name":"vasculitis, Churg-Strauss","type":"exact"},{"name":"vasculitis, eosinophilic granulomatous","type":"exact"}],"termid":"MONDO:0015943","xrefs":{"Monarch":{"xref_id":"0015943"}}}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: PBO:0049378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 2","termid":"PBO:0049378"}


id: GO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated cytotoxicity","synonyms":[{"name":"neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070942"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["GOC:pr","PMID:24014527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: GO:2000454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000454"}


id: PATO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised ventrally","termid":"PATO:0001920"}


id: MONDO:0018305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic granulomatous disease (CGD) is a rare primary immunodeficiency, mainly affecting phagocytes, which is characterized by an increased susceptibility to severe and recurrent bacterial and fungal infections, along with the development of granulomas.","definition_xrefs":["Orphanet:379"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"phagocyte bactericidal dysfunction","termid":"MONDO:0005910"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic granulomatous disease","secondary_identifiers":["MESH:D006105","NORD:968","MedDRA:10008906","NCIT:C26788","SCTID:387759001","NANDO:1200357","DOID:3265","GARD:6100","NANDO:2200757","UMLS:C0018203","icd11.foundation:1329764681","OMIMPS:306400","MEDGEN:5377"],"synonyms":[{"name":"Bridges-Good syndrome","type":"exact"},{"name":"CGD","type":"exact"},{"name":"Quie syndrome","type":"exact"},{"name":"chronic septic granulomatosis","type":"exact"},{"name":"congenital dysphagocytosis","type":"exact"},{"name":"granulomatous disease, chronic","type":"related"}],"termid":"MONDO:0018305","xrefs":{"Monarch":{"xref_id":"0018305"}}}


id: GO:0031348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response","synonyms":[{"name":"down regulation of defense response","type":"exact"},{"name":"down-regulation of defense response","type":"exact"},{"name":"downregulation of defense response","type":"exact"},{"name":"inhibition of defense response","type":"narrow"}],"termid":"GO:0031348"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: MONDO:0010061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia-blindness-deafness syndrome","secondary_identifiers":["GARD:9971","MEDGEN:338611","Orphanet:95433","UMLS:C1849094","MESH:C537309","OMIM:271250","DOID:0111612"],"synonyms":[{"name":"SCABD","type":"exact"},{"name":"SCAR3","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - blindness - deafness","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 3","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia-blindness-deafness syndrome","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia-blindness-hearing loss syndrome","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive 3","type":"related"},{"name":"spinocerebellar ataxia with blindness and deafness","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 3","type":"related"}],"termid":"MONDO:0010061","xrefs":{"Monarch":{"xref_id":"0010061"}}}


id: GO:0016456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mr","GOC:mtg_sensu","PMID:20622855","Wikipedia:XY_sex-determination_system","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation complex","termid":"GO:0046536"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"X chromosome","termid":"GO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"X chromosome located dosage compensation complex, transcription activating","synonyms":[{"name":"dosage compensation complex","type":"broad"}],"termid":"GO:0016456"}


id: PBO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 20","termid":"PBO:0047367"}


id: PBO:0074044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 26","termid":"PBO:0074044"}


id: GO:0033192
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81343],"is_not":false,"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium-bound calmodulin.","definition_xrefs":["PMID:15359118","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine phosphatase activity","termid":"GO:0004723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0004721","GO:0140096","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"calmodulin-dependent protein phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2730849","Reactome:R-HSA-4551451"],"synonyms":[{"name":"Ca2+/CaM-dependent protein phosphatase activity","type":"related"},{"name":"calcineurin activity","type":"narrow"},{"name":"calcium- and calmodulin-dependent protein phosphatase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein phosphatase activity","type":"exact"}],"termid":"GO:0033192","terms_by_termid":{"GO:0033192":null}}


id: PR:P40235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase I isoform epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.15","secondary_identifiers":["UniProtKB:P40235"],"synonyms":[{"name":"Spom972h-CSNK1E","type":"exact"}],"termid":"PR:P40235"}


id: PR:Q8TFH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium transporter protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.11","secondary_identifiers":["UniProtKB:Q8TFH3"],"synonyms":[{"name":"Spom972h-MAGT1","type":"exact"},{"name":"oligosaccharyl transferase 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit OST3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH3"}


id: MOD:01293
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O.","definition_xrefs":["OMSSA:139","PubMed:8382902","Unimod:366#N"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"deamidated L-asparagine","termid":"MOD:00684"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-asparagine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"},{"name":"oxy18","type":"exact"}],"termid":"MOD:01293"}


id: PBO:0065130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 2","termid":"PBO:0065130"}


id: SO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genome is the sum of genetic material within a cell or virion.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"has_part","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome"],"termid":"SO:0001026"}


id: PBO:0083794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the mitochondrial intermembrane space; forms a complex with Tim9p (TIM10 complex) that delivers hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0083794"}


id: GO:0090515
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103361],"is_not":false,"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"glutamate transmembrane import into vacuole","termid":"GO:0090454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090515","terms_by_termid":{"GO:0090515":null}}


id: PBO:0044699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 2","termid":"PBO:0044699"}


id: GO:0030869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that mediates transcriptional silencing at the rDNA locus (the name derives from regulator of nucleolar silencing and telophase). In Saccharomyces the complex contains Net1p, Sir2p, Cdc14p, and at least one more subunit.","definition_xrefs":["PMID:12196389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"RENT complex","termid":"GO:0030869"}


id: PBO:0067530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 674, pseudogene","termid":"PBO:0067530"}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: GO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of cell outer membrane (obsolete GO:0031230)","synonyms":[{"name":"intrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031230"}


id: PBO:0081068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC1 pseudogene 1","termid":"PBO:0081068"}


id: SO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An adenine methylated at the 6 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_adenine","termid":"SO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyladenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"6-mA","type":"exact"},{"name":"6-methyladenine","type":"exact"},{"name":"6mA","type":"exact"},{"name":"N6-methyladenine","type":"exact"},{"name":"m-6A","type":"exact"},{"name":"m6a","type":"exact"}],"termid":"SO:0001920"}


id: PR:O59770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04533","PANTHER:PTHR11599:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.04c","secondary_identifiers":["UniProtKB:O59770"],"synonyms":[{"name":"Spom972h-PSMA3","type":"exact"}],"termid":"PR:O59770"}


id: PBO:0088245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (2Fe-2S) cluster assembly co-chaperone Jac1","termid":"PBO:0088245"}


id: PBO:0091373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone-related heme binding protein, Aim18","termid":"PBO:0091373"}


id: PBO:0051636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein pseudogene 1","termid":"PBO:0051636"}


id: MONDO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa acquisita (EBA) is a subepidermal bullous dermatosis of autoimmune origin that was named as a result of its resemblance to hereditary forms of epidermolysis bullosa (HEB), most notably dystrophic HEB.","definition_xrefs":["Orphanet:46487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"acquired epidermolysis bullosa","secondary_identifiers":["NCIT:C84690","DOID:4313","SCTID:2772003","UMLS:C0079293","GARD:6360","ICD9:695.19","MedDRA:10056508","EFO:1000691","ICD10CM:L12.3","MEDGEN:37178","MESH:D016107","icd11.foundation:2034586329","NANDO:1200635"],"synonyms":[{"name":"EB acquisita","type":"related"},{"name":"EBA","type":"exact"},{"name":"acquired epidermolysis bullosa","type":"exact"},{"name":"epidermolysis bullosa Aquisita","type":"exact"},{"name":"epidermolysis bullosa acquisita","type":"exact"}],"termid":"MONDO:0018747","xrefs":{"Monarch":{"xref_id":"0018747"}}}


id: PBO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C5","termid":"PBO:0050506"}


id: FYPO:0009009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on arginine nitrogen source","synonyms":[{"name":"decreased growth on arginine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on arginine nitrogen source","type":"exact"},{"name":"reduced cell growth on arginine nitrogen source","type":"related"},{"name":"slow cell growth on arginine nitrogen source","type":"narrow"}],"termid":"FYPO:0009009"}


id: GO:0097080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane.","definition_xrefs":["GOC:mcc","PMID:20861301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"plasma membrane selenite transport","synonyms":[{"name":"plasma membrane hydrogenselenite transport","type":"exact"}],"termid":"GO:0097080"}


id: PBO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein (predicted)","termid":"PBO:0004171"}


id: PBO:0051560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 11 receptor subunit alpha","termid":"PBO:0051560"}


id: PBO:0080495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C and EGF domains","termid":"PBO:0080495"}


id: FYPO:0007539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30282034","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"normal phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007539"}


id: PBO:0073690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 3","termid":"PBO:0073690"}


id: PBO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1 (predicted)","termid":"PBO:0001266"}


id: PBO:0086365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; Svp26p mediates uptake of Ktr3p into COPII vesicles; relocalizes from nucleus to vacuole upon DNA replication stress","termid":"PBO:0086365"}


id: MONDO:0005997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["NCIT:C50783","HP:0010446","SCTID:49915006","NANDO:2200300","UMLS:C0040963","MEDGEN:21678","EFO:0007525","MESH:D014264","DOID:4078","icd11.foundation:442626161"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: GO:0070250
data:
  {"annotated_genes":["SJAG_01978","SJAG_02989"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87590,98486],"is_not":false,"summary":null,"term":"GO:0070250"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a mating projection, the projection formed by unicellular fungi in response to mating pheromone.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01978":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"mating projection membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"shmoo membrane","type":"narrow"}],"termid":"GO:0070250","terms_by_termid":{"GO:0070250":null}}


id: SO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:073"],"synonyms":[{"name":"5-methylaminomethyl-2-thiouridine","type":"exact"},{"name":"five methylaminomethyl two thiouridine","type":"exact"},{"name":"mnm5s2U","type":"exact"}],"termid":"SO:0001365"}


id: PBO:0079570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 2","termid":"PBO:0079570"}


id: MOD:00812
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an O-fucosylserine.","definition_xrefs":["PubMed:1517205","PubMed:11067851","PubMed:1904059","PubMed:10734111","PubMed:12096136","PubMed:3311742","Unimod:295#S","PubMed:3578767","PubMed:11344537","RESID:AA0404","PubMed:15189151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-fucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc)","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) serine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-fucosylserine","type":"exact"},{"name":"OFucSer","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00812"}


id: GO:0010327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-3-hexen-1-ol = CoA + (Z)-3-hexen-1-yl acetate.","definition_xrefs":["PMID:17163883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity","synonyms":[{"name":"hexenol acetyltransferase","type":"related"}],"termid":"GO:0010327"}


id: PBO:0040128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 14","termid":"PBO:0040128"}


id: GO:0102658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-methylthio-2-oxopentanoate + a standard alpha amino acid = L-homomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-5-methylthiopentanoate aminotransferase activity (obsolete GO:0102658)","termid":"GO:0102658"}


id: MONDO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of strabismus in which the eyes are deviated laterally.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exotropia","secondary_identifiers":["DOID:1143","ICD10CM:H50.1","icd11.foundation:2116859618","SCTID:399252000","UMLS:C0015310","ICD9:378.10","ICD9:378.1","MEDGEN:4613","MESH:D005099","NCIT:C34601"],"synonyms":[{"name":"divergent concomitant strabismus","type":"exact"},{"name":"divergent strabismus","type":"exact"}],"termid":"MONDO:0001286","xrefs":{"Monarch":{"xref_id":"0001286"}}}


id: PBO:0078346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 12-1","termid":"PBO:0078346"}


id: MONDO:0700172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a horse.","definition_xrefs":["NCIT:C134778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"equine neoplasm","termid":"MONDO:0700170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horse lymphoma","termid":"MONDO:0700172","xrefs":{"Monarch":{"xref_id":"0700172"}}}


id: MONDO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medullary sponge kidney (MSK) is a birth defect of the tubules - tiny tubes inside the kidneys. In a normal kidney, urine flows through these tubules as it is being formed. In MSK, tiny sacs called cysts form in the medulla (the inner part of the kidney), creating a sponge-like appearance. The cysts keep urine from flowing freely through the tubules. MSK is present at birth but symptoms typically do not occur until adolescence or adulthood. Problems caused by MSK include blood in the urine, kidney stones, and urinary tract infections. MSK rarely leads to more serious problems, such as total kidney failure. There is no cure for this condition, so treatment is aimed at removing kidney stones and treating urinary tract infections with antibiotics.","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"medullary sponge kidney","secondary_identifiers":["Orphanet:1309","MedDRA:10027104","MEDGEN:5970","ICD9:753.17","NANDO:2200173","SCTID:236443009","MESH:D007691","GARD:232","UMLS:C0022681","NCIT:C34751","icd11.foundation:1723148250","NORD:1421"],"synonyms":[{"name":"Cacchi Ricci disease","type":"related"},{"name":"Cacchi-Ricci disease","type":"exact"},{"name":"Cacchi-Ricci syndrome","type":"related"},{"name":"MSK","type":"exact"},{"name":"Precalicial canalicular ectasia","type":"exact"},{"name":"Precalyceal canalicular ectasia","type":"related"},{"name":"cystic dilatation of renal collecting tubes","type":"related"},{"name":"sponge kidney","type":"related"}],"termid":"MONDO:0015268","xrefs":{"Monarch":{"xref_id":"0015268"}}}


id: PBO:0036104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036104"}


id: MONDO:0003285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the fallopian tube. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C40127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube leiomyoma","secondary_identifiers":["DOID:5124","MEDGEN:309126","UMLS:C1517115"],"synonyms":[{"name":"fallopian tube leiomyoma","type":"exact"},{"name":"leiomyoma of fallopian tube","type":"exact"}],"termid":"MONDO:0003285","xrefs":{"Monarch":{"xref_id":"0003285"}}}


id: PBO:0068249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N1","termid":"PBO:0068249"}


id: GO:1902392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exodeoxyribonuclease activity (obsolete GO:1902392)","termid":"GO:1902392"}


id: PBO:0086542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR022C is not an essential gene","termid":"PBO:0086542"}


id: MONDO:0100272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"non-Zellweger spectrum disorder","termid":"MONDO:0100322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005066","MONDO:0019053","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX7 defect","synonyms":[{"name":"PEX7 related peroxisome biogenesis disorder","type":"exact"},{"name":"adult refsum disease due to PEX7 defect (formerly)","type":"narrow"},{"name":"rhizomelic chondrodysplasia punctata type 1 (formerly)","type":"narrow"}],"termid":"MONDO:0100272","xrefs":{"Monarch":{"xref_id":"0100272"}}}


id: PBO:0072171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 8","termid":"PBO:0072171"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["UniProtKB:Q2EEM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: MONDO:0019435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of juvenile idiopathic arthritis defined by the presence of arthritis affecting five or more separate joints during the first six months of disease, with positive serologic testing for rheumatoid factor.","definition_xrefs":["NCIT:C119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarticular juvenile idiopathic arthritis","termid":"MONDO:0018456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-positive polyarticular juvenile idiopathic arthritis","secondary_identifiers":["MEDGEN:855737","NANDO:2201058","EFO:0009731","Orphanet:85435","UMLS:C3890733","GARD:19064"],"synonyms":[{"name":"juvenile idiopathic rheumatoid factor-positive polyarthritis","type":"exact"},{"name":"polyarthritis with rheumatoid factor","type":"exact"},{"name":"polyarticular JIA, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, RF+","type":"exact"},{"name":"polyarticular juvenile idiopathic arthritis, rheumatoid Factor Positive","type":"exact"},{"name":"rheumatoid factor-positive polyarticular JIA","type":"exact"}],"termid":"MONDO:0019435","xrefs":{"Monarch":{"xref_id":"0019435"}}}


id: GO:0046703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lectin-like natural killer cell receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"natural killer cell lectin-like receptor binding","synonyms":[{"name":"KLRC4 receptor binding","type":"narrow"},{"name":"NK cell lectin-like receptor binding","type":"exact"},{"name":"NKG2D receptor binding","type":"narrow"}],"termid":"GO:0046703"}


id: GO:0047297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid + L-asparagine = an amino acid + 2-oxosuccinamate.","definition_xrefs":["RHEA:19813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"asparagine-oxo-acid transaminase activity","secondary_identifiers":["EC:2.6.1.14","MetaCyc:2.6.1.14-RXN"],"synonyms":[{"name":"L-asparagine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine--oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine-keto acid aminotransferase activity","type":"related"},{"name":"asparagine-oxo-acid aminotransferase activity","type":"exact"}],"termid":"GO:0047297"}


id: MONDO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of the digestive tract characterized by malabsorption and anemia. It is likely caused by infection leading to small intestinal mucosal injury, bacterial overgrowth and inflammatory changes. It is most prevalent in residents and visitors to tropical and subtropical climates. Clinical signs include anorexia, abdominal bloating, diarrhea and weight loss. Clinical course may progress to deficiencies of folate, vitamin B12 and iron. Prognosis is favorable with nutrient replacement and antibiotic therapy, however relapses are common.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tropical sprue","secondary_identifiers":["SCTID:47384003","ICD9:579.1","NCIT:C45428","ICD10CM:K90.1","icd11.foundation:316377284","UMLS:C0038054","DOID:10607","MEDGEN:21300","MESH:D013182"],"synonyms":[{"name":"idiopathic tropical malabsorption syndrome","type":"related"},{"name":"post-infective tropical malabsorption","type":"exact"},{"name":"sprue - tropical","type":"exact"},{"name":"tropical enteropathy","type":"related"},{"name":"tropical steatorrhea","type":"exact"}],"termid":"MONDO:0001078","xrefs":{"Monarch":{"xref_id":"0001078"}}}


id: PBO:0085968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; overproduction confers resistance to methylmercury","termid":"PBO:0085968"}


id: PBO:0081076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 8","termid":"PBO:0081076"}


id: PBO:0085437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; also binds single-stranded telomeric repeat sequence in vitro; relocalizes to the cytosol in response to hypoxia; GBP2 has a paralog, HRB1, that arose from the whole genome duplication","termid":"PBO:0085437"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: GO:0034015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ribulose 5-phosphate = L-xylulose 5-phosphate.","definition_xrefs":["EC:5.1.3.22","RHEA:18497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-ribulose-5-phosphate 3-epimerase activity","secondary_identifiers":["MetaCyc:LXULRU5P-RXN"],"synonyms":[{"name":"L-xylulose 5-phosphate 3-epimerase activity","type":"related"},{"name":"SgaU","type":"related"},{"name":"UlaE","type":"related"}],"termid":"GO:0034015"}


id: GO:0035509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of myosin-light-chain-phosphatase activity (obsolete GO:0035509)","termid":"GO:0035509"}


id: PBO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted), possible alternative UTR","termid":"PBO:0000209"}


id: PATO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of dark orange, red, of very low intensity.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Brown"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown","termid":"PATO:0000952"}


id: PATO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoid","synonyms":[{"name":"disc-shaped","type":"exact"},{"name":"disk-shaped","type":"exact"}],"termid":"PATO:0001874"}


id: GO:0120044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tapered base of the stereocilium adjacent to where it joins the hair cell body. This region contains a rootlet comprised of bundled actin filaments which spans the joint and stabilizes the stereocilium.","definition_xrefs":["GOC:krc","PMID:20170899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium base","synonyms":[{"name":"stereocilium taper","type":"exact"}],"termid":"GO:0120044"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04430","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: PR:O74969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.08","synonyms":[{"name":"Spom972h-ght2","type":"exact"},{"name":"hexose transporter 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74969"}


id: PBO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHD4 antisense RNA 1","termid":"PBO:0045979"}


id: PBO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIM1 family serine/threonine protein kinase Cdr1/Nim1","termid":"PBO:0001672"}


id: SO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.","definition_xrefs":["PMID:8689565","PMID:17347150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSE","synonyms":[{"name":"heat shock element","type":"exact"}],"termid":"SO:0001850"}


id: MONDO:0005315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Breaks in bones.","definition_xrefs":["MESH:D050723"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone fracture","secondary_identifiers":["SCTID:125605004","EFO:0003931","NCIT:C3046"],"synonyms":[{"name":"fracture","type":"exact"},{"name":"fracture of bone","type":"exact"},{"name":"fracture(s)","type":"exact"}],"termid":"MONDO:0005315","xrefs":{"Monarch":{"xref_id":"0005315"}}}


id: PBO:0084371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid raft associated protein; overexpression restores Pma1p localization to lipid rafts which is required for targeting of Pma1p to the plasma membrane; sometimes classified in the medium-chain dehydrogenase/reductases (MDRs) superfamily; AST2 has a paralog, AST1, that arose from the whole genome duplication","termid":"PBO:0084371"}


id: PR:Q10261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.13 gene.","definition_xrefs":["UniProtKB:Q10261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.13","synonyms":[{"name":"Spom972h-SPAC56F8.13","type":"exact"}],"termid":"PR:Q10261"}


id: GO:0098583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vocalization behavior that is the result of learning.","definition_xrefs":["GOC:dos","GOC:BHF","GOC:rl","PMID:17035521","PMID:16418265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vocalization behavior","termid":"GO:0071625"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior","termid":"GO:0098583"}


id: MONDO:0007183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azotemia, familial","secondary_identifiers":["MEDGEN:400033","UMLS:C1862358","OMIM:109160","MESH:C566233"],"synonyms":[{"name":"azotemia, familial","type":"exact"}],"termid":"MONDO:0007183","xrefs":{"Monarch":{"xref_id":"0007183"}}}


id: PBO:0055577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3013","termid":"PBO:0055577"}


id: GO:0032708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-24 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-24 production","termid":"GO:0032668"},{"relation_name":"negatively_regulates","term_name":"interleukin-24 production","termid":"GO:0032628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-24 production","secondary_identifiers":["GO:0045532"],"synonyms":[{"name":"down regulation of interleukin-24 production","type":"exact"},{"name":"down-regulation of interleukin-24 production","type":"exact"},{"name":"downregulation of interleukin-24 production","type":"exact"},{"name":"inhibition of interleukin-24 production","type":"narrow"},{"name":"negative regulation of IL-24 production","type":"exact"},{"name":"negative regulation of interleukin-24 biosynthetic process","type":"narrow"}],"termid":"GO:0032708"}


id: PBO:0027647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_BE49385A","termid":"PBO:0027647"}


id: MONDO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar ataxia with peripheral neuropathy (obsolete MONDO:0016136)","secondary_identifiers":["Orphanet:207028"],"termid":"MONDO:0016136","xrefs":{"Monarch":{"xref_id":"0016136"}}}


id: FYPO:0002447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the N-glycosylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein N-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.","definition_xrefs":["GO:0006487","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein N-linked glycosylation during vegetative growth","synonyms":[{"name":"abnormal protein N-glycosylation during vegetative growth","type":"exact"},{"name":"abnormal protein N-linked glycosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002447"}


id: GO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.","definition_xrefs":["EC:1.14.13.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pentachlorophenol monooxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0313","MetaCyc:PCP4MONO-RXN","RHEA:18685"],"synonyms":[{"name":"PCB 4-monooxygenase activity","type":"related"},{"name":"PCB4MO activity","type":"related"},{"name":"PCP hydroxylase activity","type":"related"},{"name":"PcpB","type":"related"},{"name":"pentachlorophenol 4-monooxygenase activity","type":"exact"},{"name":"pentachlorophenol dechlorinase activity","type":"related"},{"name":"pentachlorophenol dehalogenase activity","type":"related"},{"name":"pentachlorophenol hydroxylase activity","type":"exact"},{"name":"pentachlorophenol,NADPH:oxygen oxidoreductase (hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018677"}


id: PR:P0CT63
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps3002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.03c","synonyms":[{"name":"Spom972h-rps3002","type":"exact"}],"termid":"PR:P0CT63"}


id: MONDO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated inherited retinal disorder (obsolete MONDO:0035002)","secondary_identifiers":["Orphanet:520817"],"termid":"MONDO:0035002","xrefs":{"Monarch":{"xref_id":"0035002"}}}


id: FYPO:0004645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004645"}


id: PBO:0069808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1094, pseudogene","termid":"PBO:0069808"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["NCIT:C27591","UMLS:C0152179","ICD9:352.3","SCTID:73765005","DOID:12491","MEDGEN:101824","MESH:D020421"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: GO:0097646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:10871296","PMID:12037140","PMID:18687416","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"calcitonin family receptor signaling pathway","synonyms":[{"name":"calcitonin family receptor signalling pathway","type":"exact"}],"termid":"GO:0097646"}


id: PR:O74787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cho2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.03","synonyms":[{"name":"PEAMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cho2","type":"exact"}],"termid":"PR:O74787"}


id: PR:O43048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C215.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.01","synonyms":[{"name":"Spom972h-SPBC215.01","type":"exact"}],"termid":"PR:O43048"}


id: GO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["PMID:19202061","GOC:mah","PMID:19214193"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked deubiquitination (obsolete GO:0070537)","termid":"GO:0070537"}


id: PBO:0039386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 1C","termid":"PBO:0039386"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: GO:0001864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pentraxin, a member of a family of inflammatory proteins with a radially symmetric arrangement of five identical, noncovalently linked chains in a pentagonal array.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pentraxin binding","termid":"GO:0001864"}


id: PBO:0058877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10393","termid":"PBO:0058877"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:ai","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: PBO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 37","termid":"PBO:0072508"}


id: SO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small untranslated RNA which is induced in response to oxidative stress in Escherichia coli. Acts as a global regulator to activate or repress the expression of as many as 40 genes, including the fhlA-encoded transcriptional activator and the rpoS-encoded sigma(s) subunit of RNA polymerase. OxyS is bound by the Hfq protein, that increases the OxyS RNA interaction with its target messages.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxyS_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/OxyS_RNA"],"synonyms":[{"name":"OxyS RNA","type":"exact"}],"termid":"SO:0000384"}


id: GO:0004497
data:
  {"annotated_genes":["SJAG_04608","SJAG_04032","SJAG_05311","SJAG_00370","SJAG_04913","SJAG_03249","SJAG_04000","SJAG_00459","SJAG_03018","SJAG_02285","SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59328],"is_not":false,"summary":null,"term":"GO:0004497"},{"annotations":[62963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008682"},{"annotations":[108853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160224"},{"annotations":[61187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"},{"annotations":[71607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[73345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019135"},{"annotations":[74108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[57687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[93592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031172"},{"annotations":[61191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016712"},{"annotations":[91287,74277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102772"},{"annotations":[79000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[87933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the incorporation of one atom of molecular oxygen (O2) into the substrate and the reduction of the other atom of O2 to water.","definition_xrefs":["PMID:1444267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00459":null,"SJAG_02285":null,"SJAG_03018":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04608":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"monooxygenase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-76466","Reactome:R-HSA-76397","Reactome:R-HSA-2161795","Reactome:R-HSA-2161899","Reactome:R-HSA-211910","Reactome:R-HSA-215526","Reactome:R-HSA-9027044","Reactome:R-HSA-212005","Reactome:R-HSA-5662662","Reactome:R-HSA-211959","Reactome:R-HSA-9753285","Reactome:R-HSA-5423647","Reactome:R-HSA-2161890","Reactome:R-HSA-5602242","Reactome:R-HSA-2162191","Reactome:R-HSA-5423664","Reactome:R-HSA-76373","Reactome:R-HSA-9915993","Reactome:R-HSA-211988","Reactome:R-HSA-76416","Reactome:R-HSA-211948","Reactome:R-HSA-76354","Reactome:R-HSA-143468","Reactome:R-HSA-211929","Reactome:R-HSA-9027321","Reactome:R-HSA-9756162","Reactome:R-HSA-76472","Reactome:R-HSA-212004","Reactome:R-HSA-9756180","Reactome:R-HSA-156526","Reactome:R-HSA-211924","Reactome:R-HSA-9027043","Reactome:R-HSA-9750016","Reactome:R-HSA-76426","Reactome:R-HSA-217258","Reactome:R-HSA-9037761","Reactome:R-HSA-9018874","Reactome:R-HSA-5662692","Reactome:R-HSA-5602295","Reactome:R-HSA-2161940","Reactome:R-HSA-9756138","Reactome:R-HSA-211962","Reactome:R-HSA-5602272","Reactome:R-HSA-9027302","Reactome:R-HSA-8865107","Reactome:R-HSA-9915992","Reactome:R-HSA-9756169","Reactome:R-HSA-76456","Reactome:R-HSA-211991","Reactome:R-HSA-5423678","Reactome:R-HSA-2161814","Reactome:R-HSA-9915971","Reactome:R-HSA-213175","Reactome:R-HSA-211960","Reactome:R-HSA-9749986","Reactome:R-HSA-211882","Reactome:R-HSA-76434","Reactome:R-HSA-211968","Reactome:R-HSA-5605147","Reactome:R-HSA-211919","Reactome:R-HSA-5663050","Reactome:R-HSA-76386","Reactome:R-HSA-211904","Reactome:R-HSA-5423672","Reactome:R-HSA-9915997","Reactome:R-HSA-76475","Reactome:R-HSA-9027042"],"synonyms":[{"name":"hydroxylase activity","type":"related"},{"name":"mixed-function oxidase","type":"related"}],"termid":"GO:0004497","terms_by_termid":{"GO:0000254":null,"GO:0004497":null,"GO:0004499":null,"GO:0004506":null,"GO:0008398":null,"GO:0008682":null,"GO:0016712":null,"GO:0019135":null,"GO:0031172":null,"GO:0080132":null,"GO:0102772":null,"GO:0106364":null,"GO:0160224":null}}


id: PBO:0049793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0049793"}


id: MONDO:0013454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the IMPDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"IMPDH1-related retinopathy","termid":"MONDO:1040051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 11","secondary_identifiers":["GARD:10488","DOID:0110216","HGNC:6052","MEDGEN:326698","ICD10CM:H35.5","MESH:C564140","OMIM:613837","UMLS:C1840284"],"synonyms":[{"name":"IMPDH1 Leber congenital amaurosis","type":"exact"},{"name":"LCA11","type":"exact"},{"name":"Leber congenital amaurosis 11","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in IMPDH1","type":"exact"},{"name":"Leber congenital amaurosis type 11","type":"exact"},{"name":"amaurosis congenita of Leber, type 11","type":"related"}],"termid":"MONDO:0013454","xrefs":{"Monarch":{"xref_id":"0013454"}}}


id: PBO:0082020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator","termid":"PBO:0082020"}


id: MONDO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"discoid lupus erythematosus of eyelid","secondary_identifiers":["UMLS:C0155180","MEDGEN:509835","SCTID:79291003","DOID:9076","icd11.foundation:743513349","ICD9:373.34"],"termid":"MONDO:0004706","xrefs":{"Monarch":{"xref_id":"0004706"}}}


id: PBO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 5","termid":"PBO:0050600"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: MONDO:0017126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculo-skeletal-renal syndrome","secondary_identifiers":["Orphanet:2716"],"synonyms":[{"name":"oculo skeletal renal syndrome","type":"related"}],"termid":"MONDO:0017126","xrefs":{"Monarch":{"xref_id":"0017126"}}}


id: GO:1990677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that promotes the biogenesis of mitochondrial F1Fo-ATP synthase by facilitating assembly of the peripheral stalk. Loss of INAC function causes dissociation of the F1-domain from the membrane-integral Fo-portion.","definition_xrefs":["PMID:24942160","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner membrane assembly complex","synonyms":[{"name":"INAC complex","type":"exact"},{"name":"inner membrane assembly complex","type":"broad"},{"name":"mitochondrion inner membrane assembly complex","type":"exact"}],"termid":"GO:1990677"}


id: GO:0019341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzo-p-dioxin metabolic process","termid":"GO:0018894"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzo-p-dioxin catabolic process","secondary_identifiers":["MetaCyc:P661-PWY"],"synonyms":[{"name":"dibenzo-p-dioxin breakdown","type":"exact"},{"name":"dibenzo-p-dioxin catabolism","type":"exact"},{"name":"dibenzo-p-dioxin degradation","type":"exact"}],"termid":"GO:0019341"}


id: PBO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 1","termid":"PBO:0043533"}


id: MONDO:0010159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare childhood cancer predisposition syndrome caused by biallelic inheritance of mutations in MLH1, MSH2, MSH6, or PMS2 genes. It is characterized by the development of childhood cancers, usually hematological malignancies and/or brain tumors, and colorectal cancers with multiple intestinal polyps. The majority of patients show signs of neurofibromatosis type 1.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete immunodeficiency with severe reduction in serum IgG and IgA with normal/elevated IgM and normal number of B-cells (obsolete MONDO:0018040)","termid":"MONDO:0018040"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"mismatch repair cancer syndrome","termid":"MONDO:0031219"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"mismatch repair cancer syndrome 1","secondary_identifiers":["NCIT:C130202","SCTID:61665008","MESH:C536928","GARD:420","NORD:1805","UMLS:C5399763","MEDGEN:1748029","OMIM:276300"],"synonyms":[{"name":"BTP1 syndrome","type":"exact"},{"name":"CMMR-D","type":"exact"},{"name":"CMMR-D syndrome","type":"exact"},{"name":"CNS tumors with familial polyposis of the colon","type":"related"},{"name":"CNS tumours with familial polyposis of the colon","type":"related"},{"name":"MMR deficiency","type":"related"},{"name":"MMRCS","type":"related"},{"name":"MMRCS1","type":"exact"},{"name":"Turcot Syndrome","type":"exact"},{"name":"Turcot syndrome","type":"related"},{"name":"brain tumor-polyposis syndrome","type":"related"},{"name":"brain tumor-polyposis syndrome 1","type":"exact"},{"name":"childhood cancer syndrome","type":"related"},{"name":"constitutional MIS-match repair deficiency syndrome","type":"exact"},{"name":"constitutional mismatch repair deficiency syndrome","type":"exact"},{"name":"glioma-polyposis syndrome","type":"related"},{"name":"malignant tumors of the central nervous system associated with familial polyposis of the colon","type":"related"},{"name":"malignant tumours of the central nervous system associated with familial polyposis of the colon","type":"related"},{"name":"mismatch repair cancer syndrome","type":"related"},{"name":"mismatch repair cancer syndrome 1","type":"exact"},{"name":"mismatch repair deficiency","type":"related"}],"termid":"MONDO:0010159","xrefs":{"Monarch":{"xref_id":"0010159"}}}


id: PBO:0079079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: GO:0071327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to trehalose","termid":"GO:0010353"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trehalose stimulus","termid":"GO:0071327"}


id: GO:0004414
data:
  {"annotated_genes":["SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78113],"is_not":false,"summary":null,"term":"GO:0004414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + acetyl-CoA = O-acetyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.31","RHEA:13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00395":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"homoserine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOMOSERINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01776"],"synonyms":[{"name":"L-homoserine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-homoserine O-acetyltransferase activity","type":"related"},{"name":"homoserine O-trans-acetylase activity","type":"related"},{"name":"homoserine acetyltransferase activity","type":"related"},{"name":"homoserine transacetylase activity","type":"broad"},{"name":"homoserine-O-transacetylase activity","type":"related"}],"termid":"GO:0004414","terms_by_termid":{"GO:0004414":null}}


id: MOD:00205
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to D-tryptophan.","definition_xrefs":["ChEBI:29955","PubMed:8910408","RESID:AA0198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-tryptophan","synonyms":[{"name":"(R)-2-amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"D-Trp","type":"exact"},{"name":"D-tryptophan","type":"exact"},{"name":"MOD_RES D-tryptophan","type":"exact"},{"name":"alpha-amino-beta-(3-indolyl)propionoic acid","type":"exact"}],"termid":"MOD:00205"}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: MONDO:0044261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete menoq1 (obsolete MONDO:0044261)","secondary_identifiers":["OMIM:300488"],"synonyms":[{"name":"MENOQ1","type":"related"},{"name":"menopause, natural, AGE AT, quantitative trait locus 1","type":"related"},{"name":"menopause, natural, age at, QTL1, X-linked dominant","type":"exact"}],"termid":"MONDO:0044261","xrefs":{"Monarch":{"xref_id":"0044261"}}}


id: MONDO:0004360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the breast tissue.","definition_xrefs":["NCIT:C5189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast extraskeletal osteosarcoma","secondary_identifiers":["UMLS:C1335149","DOID:7787","MEDGEN:235414"],"synonyms":[{"name":"breast extraskeletal osteosarcoma","type":"exact"},{"name":"breast osteosarcoma","type":"exact"},{"name":"breast osteosarcoma (disease)","type":"exact"},{"name":"osteogenic breast sarcoma","type":"exact"},{"name":"osteogenic sarcoma of breast","type":"exact"},{"name":"osteogenic sarcoma of the breast","type":"exact"},{"name":"osteosarcoma of breast","type":"exact"},{"name":"osteosarcoma of the breast","type":"exact"}],"termid":"MONDO:0004360","xrefs":{"Monarch":{"xref_id":"0004360"}}}


id: PBO:0027309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027309"}


id: PBO:0057132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 216a","termid":"PBO:0057132"}


id: GO:0021635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"trigeminal nerve development","termid":"GO:0021559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve maturation","synonyms":[{"name":"CN V maturation","type":"related"}],"termid":"GO:0021635"}


id: MONDO:0850093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An electroclinical syndrome characterized by the occurrence of generalized onset seizures that cause lapses in awareness, begin and end abruptly, typically last only a few seconds and are associated with abnormal spike-wave discharges as seen by electroencephalogram.","definition_xrefs":["DOID:0070309"],"gene_count":0,"genotype_count":0,"name":"obsolete absence epilepsy (obsolete MONDO:0850093)","termid":"MONDO:0850093","xrefs":{"Monarch":{"xref_id":"0850093"}}}


id: PBO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any1","termid":"PBO:0090129"}


id: FYPO:0005266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium dodecyl sulfate (SDS) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium dodecyl sulphate","type":"exact"},{"name":"resistant to SDS","type":"exact"},{"name":"resistant to sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0005266"}


id: MONDO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraparesis-cataracts-speech delay syndrome","secondary_identifiers":["OMIM:619338","Orphanet:615938","GARD:18033"],"synonyms":[{"name":"Fatty acyl-CoA reductase 1 superactivity","type":"exact"}],"termid":"MONDO:0036212","xrefs":{"Monarch":{"xref_id":"0036212"}}}


id: MONDO:1012810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in pigs due to a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, MYH7-related, pig","secondary_identifiers":["OMIA:002212-9823"],"synonyms":[{"name":"cardiomyopathy, hypertrophic, MYH7-related, pig","type":"exact"}],"termid":"MONDO:1012810","xrefs":{"Monarch":{"xref_id":"1012810"}}}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: MONDO:1012677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in golden hamsters due to a mutation in the MITF gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, golden hamster","termid":"MONDO:1011618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, MITF-related, golden hamster","secondary_identifiers":["OMIA:001401-10036"],"synonyms":[{"name":"Waardenburg syndrome, type 2A, golden hamster","type":"related"}],"termid":"MONDO:1012677","xrefs":{"Monarch":{"xref_id":"1012677"}}}


id: MONDO:0024581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0024581 (obsolete MONDO:0024581)","termid":"MONDO:0024581","xrefs":{"Monarch":{"xref_id":"0024581"}}}


id: MONDO:0009512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen-like syndrome, lethal type, is characterized by multiple joint dislocation and respiratory insufficiency due to tracheomalacia and/or lung hypoplasia. It has been described in less than ten patients. Transmission is thought to be autosomal recessive. Brain dysplasia has been described in some patients and could result from systemic hypoxic-ischemic insults during the second half of pregnancy, although genetic factors have not been ruled out.","definition_xrefs":["Orphanet:2371"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal Larsen-like syndrome","secondary_identifiers":["MEDGEN:343375","SCTID:719409004","UMLS:C1855535","GARD:3181","icd11.foundation:1014532279","MESH:C537872","OMIM:245650"],"synonyms":[{"name":"Larsen-like multiple joint dislocation syndrome","type":"related"},{"name":"Larsen-like syndrome, lethal type","type":"related"}],"termid":"MONDO:0009512","xrefs":{"Monarch":{"xref_id":"0009512"}}}


id: GO:0036227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mitotic cell cycle is halted during G2 phase as a result of deprivation of glucose.","definition_xrefs":["GOC:al","GOC:mtg_cell_cycle","GOC:mah","PMID:958201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 cell cycle arrest in response to glucose starvation","termid":"GO:0036227"}


id: GO:0045458
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103960],"is_not":false,"summary":null,"term":"GO:0045458"}]},"cv_name":"biological_process","definition":"Genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"recombination within rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination within ribosomal DNA repeats","type":"exact"}],"termid":"GO:0045458","terms_by_termid":{"GO:0045458":null}}


id: PBO:0048586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein alpha-galactosyltransferase 2, pseudogene","termid":"PBO:0048586"}


id: MONDO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stress polycythemia (obsolete MONDO:0002439)","termid":"MONDO:0002439","xrefs":{"Monarch":{"xref_id":"0002439"}}}


id: GO:0004499
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57687],"is_not":false,"summary":null,"term":"GO:0004499"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O.","definition_xrefs":["RHEA:24468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N,N-dimethylaniline monooxygenase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:1.14.13.8-RXN","GO:0047076","Reactome:R-HSA-139970","Reactome:R-HSA-217255","Reactome:R-HSA-5602966"],"synonyms":[{"name":"1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine:oxygen N-oxidoreductase activity","type":"related"},{"name":"DMA oxidase activity","type":"related"},{"name":"FAD-containing monooxygenase activity","type":"related"},{"name":"FMO activity","type":"related"},{"name":"N,N-dimethylaniline,NADPH:oxygen oxidoreductase (N-oxide-forming)","type":"related"},{"name":"Ziegler's enzyme","type":"related"},{"name":"dimethylaniline N-oxidase activity","type":"related"},{"name":"dimethylaniline monooxygenase (N-oxide-forming) activity","type":"exact"},{"name":"dimethylaniline oxidase activity","type":"related"},{"name":"flavin mixed function oxidase activity","type":"related"},{"name":"flavin monooxygenase activity","type":"related"},{"name":"flavin-containing monooxygenase activity","type":"broad"},{"name":"methylphenyltetrahydropyridine N-monooxygenase activity","type":"exact"},{"name":"mixed-function amine oxidase activity","type":"related"}],"termid":"GO:0004499","terms_by_termid":{"GO:0004499":null}}


id: MONDO:0006321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma of the adrenal cortex characterized by the absence of a hormonal syndrome or symptoms suggestive of adrenal disease.","definition_xrefs":["NCIT:C48458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"},{"relation_name":"is_a","term_name":"non-functioning endocrine neoplasm","termid":"MONDO:0021119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-functioning adrenal cortex adenoma","secondary_identifiers":["UMLS:C1709240","MEDGEN:313501","EFO:1000399"],"synonyms":[{"name":"adrenal cortex non-functioning endocrine neoplasm","type":"exact"},{"name":"adrenal cortical incidentaloma","type":"exact"},{"name":"non-functioning adrenal cortex adenoma","type":"exact"},{"name":"non-functioning adrenal cortical adenoma","type":"exact"},{"name":"non-functioning endocrine neoplasm of adrenal cortex","type":"exact"},{"name":"nonfunctional adrenal cortex adenoma","type":"exact"}],"termid":"MONDO:0006321","xrefs":{"Monarch":{"xref_id":"0006321"}}}


id: MONDO:0025511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neuroendocrine neoplasm that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited neuroendocrine tumor (obsolete MONDO:0025511)","secondary_identifiers":["Orphanet:271847"],"synonyms":[{"name":"genetic neuroendocrine tumor","type":"related"},{"name":"genetic neuroendocrine tumour","type":"related"},{"name":"hereditary neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0025511","xrefs":{"Monarch":{"xref_id":"0025511"}}}


id: PBO:0029871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation","termid":"PBO:0029871"}


id: PBO:0070441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase A pseudogene 1","termid":"PBO:0070441"}


id: PBO:0063586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 1","termid":"PBO:0063586"}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: PBO:0066714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 11","termid":"PBO:0066714"}


id: FYPO:0000188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to DNA damage stimulus during vegetative growth","termid":"FYPO:0000157"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal DNA repair","termid":"FYPO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA repair during vegetative growth","synonyms":[{"name":"abnormal DNA repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000188"}


id: PBO:0060428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 1","termid":"PBO:0060428"}


id: PBO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9 pseudogene 1","termid":"PBO:0060722"}


id: PBO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 2","termid":"PBO:0043652"}


id: PBO:0062873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7B","termid":"PBO:0062873"}


id: FYPO:0004229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth during cellular response to ionizing radiation","synonyms":[{"name":"normal cell population growth during cellular response to IR","type":"exact"},{"name":"normal cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"normal cellular response to ionizing radiation","type":"related"},{"name":"normal sensitivity to ionizing radiation","type":"related"},{"name":"normal vegetative cell population growth during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004229"}


id: GO:0006628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The translocation of proteins across the mitochondrial membrane. In the presence of a translocating chain, the outer membrane import machinery (MOM complex) and the inner membrane import machinery (MIM complex) form translocation contact sites as a part of the membrane preprotein import machinery.","definition_xrefs":["PMID:7600576"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial translocation (obsolete GO:0006628)","synonyms":[{"name":"mitochondrial translocation","type":"exact"}],"termid":"GO:0006628"}


id: PBO:0091123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7","termid":"PBO:0091123"}


id: MONDO:0700223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of muscle tissue disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary skeletal muscle disorder","synonyms":[{"name":"genetic muscle disease","type":"exact"},{"name":"genetic muscle disorder","type":"exact"},{"name":"genetic muscular disease","type":"exact"},{"name":"genetic muscular disorder","type":"exact"},{"name":"hereditary muscle disorder","type":"exact"}],"termid":"MONDO:0700223","xrefs":{"Monarch":{"xref_id":"0700223"}}}


id: MONDO:0001706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoidosis of the cerebrum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurosarcoidosis","termid":"MONDO:0045047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral sarcoidosis","secondary_identifiers":["NCIT:C35441","MEDGEN:140767","UMLS:C0398676","DOID:13403","SCTID:111936002"],"synonyms":[{"name":"cerebral sarcoidosis","type":"exact"},{"name":"sarcoidosis of telencephalon","type":"exact"},{"name":"telencephalon sarcoidosis","type":"exact"}],"termid":"MONDO:0001706","xrefs":{"Monarch":{"xref_id":"0001706"}}}


id: PBO:0074796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-1","termid":"PBO:0074796"}


id: GO:0060430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung saccule from an initial condition to its mature state. The lung saccule is the primitive gas exchange portion of the lung composed of type I and type II cells.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung saccule development","synonyms":[{"name":"lung saccular development","type":"broad"}],"termid":"GO:0060430"}


id: GO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 4 proteinase activated receptor binding","synonyms":[{"name":"type 4 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031875"}


id: PBO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(4)(q12)","termid":"PBO:0047877"}


id: PBO:0085345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; displays transacylase activity in vitro; overproduction confers resistance to lysophosphatidylcholine","termid":"PBO:0085345"}


id: PBO:0027178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_increased_numbers_at_cell_tip_during_early_mitosis","termid":"PBO:0027178"}


id: PBO:0064175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XB, pseudogene","termid":"PBO:0064175"}


id: FYECO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfur was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited sulfur","synonyms":[{"name":"limited sulphur added","type":"exact"}],"termid":"FYECO:0000180"}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77194,102617],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.13-RXN","KEGG_REACTION:R00885","Reactome:R-HSA-446221","EC:2.7.7.13"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: GO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of immunoglobulin production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production","secondary_identifiers":["GO:0051024","GO:0002642"],"synonyms":[{"name":"activation of immunoglobulin production","type":"narrow"},{"name":"positive regulation of immunoglobulin biosynthetic process","type":"narrow"},{"name":"positive regulation of immunoglobulin secretion","type":"narrow"},{"name":"stimulation of immunoglobulin production","type":"narrow"},{"name":"up regulation of immunoglobulin production","type":"exact"},{"name":"up-regulation of immunoglobulin production","type":"exact"},{"name":"upregulation of immunoglobulin production","type":"exact"}],"termid":"GO:0002639"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: MONDO:0958357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty in male","termid":"MONDO:0958270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary central precocious puberty in male","secondary_identifiers":["UMLS:C5816760","MEDGEN:1853131","Orphanet:650092"],"termid":"MONDO:0958357","xrefs":{"Monarch":{"xref_id":"0958357"}}}


id: GO:0004934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the mating-type alpha-factor pheromone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type alpha-factor pheromone receptor activity","synonyms":[{"name":"class D G protein coupled receptor activity","type":"broad"},{"name":"class D G-protein coupled receptor activity","type":"broad"},{"name":"class D G-protein-coupled receptor activity","type":"broad"},{"name":"class D GPCR activity","type":"broad"}],"termid":"GO:0004934"}


id: PBO:0067742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 41","termid":"PBO:0067742"}


id: PBO:0028240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus","termid":"PBO:0028240"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: GO:0080134
data:
  {"annotated_genes":["SJAG_03695","SJAG_01150","SJAG_03048","SJAG_02244","SJAG_00573","SJAG_02682","SJAG_00293","SJAG_00642","SJAG_00823","SJAG_03969","SJAG_05000","SJAG_01528","SJAG_02331","SJAG_03160","SJAG_02392","SJAG_01585","SJAG_04666","SJAG_03568","SJAG_03705","SJAG_04522","SJAG_02104","SJAG_01632","SJAG_03345","SJAG_01253","SJAG_03417","SJAG_03263","SJAG_02058","SJAG_01114","SJAG_00424","SJAG_00610","SJAG_04457","SJAG_00369","SJAG_01205","SJAG_04825","SJAG_01787","SJAG_02292"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95345,117944,103330,106597,107165,98948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[101892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[79314,79837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[111341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[111294,90711,105444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[90234,91892,88900,117518,69403,87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[68112,71107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903833"},{"annotations":[115993,88725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[111621,116886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[93361,109755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[110504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905168"},{"annotations":[106962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[113030,62232,80207,113029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[101915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[90377,74387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[108888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00369":null,"SJAG_00424":null,"SJAG_00573":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00823":null,"SJAG_01114":null,"SJAG_01150":null,"SJAG_01205":null,"SJAG_01253":null,"SJAG_01528":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_02058":null,"SJAG_02104":null,"SJAG_02244":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02392":null,"SJAG_02682":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03263":null,"SJAG_03345":null,"SJAG_03417":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04457":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0080134","terms_by_termid":{"GO:0010569":null,"GO:0045739":null,"GO:1900039":null,"GO:1903138":null,"GO:1903139":null,"GO:1903833":null,"GO:1904293":null,"GO:1904332":null,"GO:1904547":null,"GO:1905168":null,"GO:2000639":null,"GO:2000640":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: RO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_presynaptic_terminal_in","termid":"RO:0002113"}


id: GO:0099110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached.","definition_xrefs":["GOC:vw","PMID:11018050","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization based protein transport","termid":"GO:0099112"},{"relation_name":"is_a","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based protein transport to cell tip cortex","termid":"GO:0099110"}


id: PBO:0064200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 8","termid":"PBO:0064200"}


id: PBO:0051344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-26","termid":"PBO:0051344"}


id: GO:0001680
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72085,76592],"is_not":false,"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"Post-transcriptional addition of the terminal 3' CCA sequence to a tRNA which does not encode this sequence within the primary transcript. CCA addition proceeds by the sequential addition of CTP, CTP, and then ATP to the 3' end of the tRNA, yielding a diphosphate with each nucleotide addition.","definition_xrefs":["GOC:go_curators","PMID:2247609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA 3'-end processing","termid":"GO:0042780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA 3'-terminal CCA addition","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001680","terms_by_termid":{"GO:0001680":null}}


id: GO:0071664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains a catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:rl","PMID:14661054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catenin-TCF7L2 complex","synonyms":[{"name":"catenin-TCF4 complex","type":"exact"}],"termid":"GO:0071664"}


id: SO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription terminator that is not dependent upon Rho. Rather, the mRNA contains a sequence that allows it to base-pair with itself and make a stem-loop structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_terminator","termid":"SO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho_independent_bacterial_terminator","synonyms":[{"name":"rho independent bacterial terminator","type":"exact"}],"termid":"SO:0000982"}


id: GO:0050001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + D-glutamate.","definition_xrefs":["EC:3.5.1.35","MetaCyc:D-GLUTAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"D-glutaminase activity","secondary_identifiers":["RHEA:22840"],"synonyms":[{"name":"D-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050001"}


id: GO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of proteins that induce or sustain apoptosis to an active form.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of pro-apoptotic gene products (obsolete GO:0008633)","synonyms":[{"name":"activation of pro-apoptotic gene products","type":"exact"},{"name":"induction of pro-apoptotic gene products","type":"related"}],"termid":"GO:0008633"}


id: PBO:0053073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin B receptor","termid":"PBO:0053073"}


id: MONDO:0013019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondyloepimetaphyseal dysplasia, Pakistani type (obsolete MONDO:0013019)","termid":"MONDO:0013019","xrefs":{"Monarch":{"xref_id":"0013019"}}}


id: GO:0098506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 3' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 3' dephosphorylation","termid":"GO:0098506"}


id: PBO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase subunit Emi5 (predicted)","termid":"PBO:0002591"}


id: PR:P17937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rlp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.06","synonyms":[{"name":"Spom972h-rlp7","type":"exact"}],"termid":"PR:P17937"}


id: PBO:0069734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1015, pseudogene","termid":"PBO:0069734"}


id: MONDO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye disorder that results from vitamin A deficiency, with basis in disruption of maintenance of the specialized epithelial surfaces, leading to atrophic changes in the normal mucosal surface, with loss of goblet cells, and replacement of the normal epithelium by an inappropriate keratinized stratified squamous epithelium. In addition, the substantia propria of the cornea breaks down and liquefies, resulting in keratomalacia.","definition_xrefs":["Wikipedia:Keratomalacia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratomalacia","secondary_identifiers":["SCTID:85149007","UMLS:C0152455","DOID:11267","ICD9:371.45","icd11.foundation:497316188","MESH:C536156","MEDGEN:57777"],"termid":"MONDO:0001250","xrefs":{"Monarch":{"xref_id":"0001250"}}}


id: PBO:0082171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent tRNA methyltransferase; also involved in methoxycarbonylation; required for the synthesis of wybutosine (yW), a modified guanosine found at the 3'-position adjacent to the anticodon of phe-tRNA; similarity to Ppm1p","termid":"PBO:0082171"}


id: PBO:0083272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 96% of ORF overlaps the verified gene RPC53; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083272"}


id: PBO:0056504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 6","termid":"PBO:0056504"}


id: PBO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region, candidate 9","termid":"PBO:0042691"}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: GO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosamine 6-phosphate + H2O = D-tagatose 6-phosphate + NH3.","definition_xrefs":["PMID:10931310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"galactosamine-6-phosphate isomerase activity","synonyms":[{"name":"AgaI","type":"related"},{"name":"galactosamine-6-phosphate deaminase activity","type":"exact"}],"termid":"GO:0043877"}


id: PBO:0058120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4422 host gene","termid":"PBO:0058120"}


id: _global:has_functional_parent
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"'Entity A' has_functional_parent 'Entity B' implies that 'Entity B' has at least one chacteristic group from which 'Entity A' can be derived by functional modification.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_functional_parent","termid":"_global:has_functional_parent"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: PBO:0043157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 25","termid":"PBO:0043157"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["GOC:jc","CL:0000573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: GO:0047196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-alcohol + acyl-CoA = a long-chain ester + CoA.","definition_xrefs":["EC:2.3.1.75","MetaCyc:2.3.1.75-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"long-chain-alcohol O-fatty-acyltransferase activity","secondary_identifiers":["GO:0103095","RHEA:38443","Reactome:R-HSA-5696424","Reactome:R-HSA-8848582"],"synonyms":[{"name":"acyl-CoA:long-chain-alcohol O-acyltransferase activity","type":"related"},{"name":"wax ester synthase activity","type":"exact"},{"name":"wax synthase activity","type":"related"},{"name":"wax-ester synthase activity","type":"related"}],"termid":"GO:0047196"}


id: GO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075099)","termid":"GO:0075099"}


id: MONDO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin B6. It is usually caused by alcoholism, malabsorption, or as a side effect of medications. Signs and symptoms include stomatitis, glossitis, dermatitis, peripheral neuropathy, irritability, seizures, and anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine deficiency anemia","secondary_identifiers":["MEDGEN:543733","ICD9:281.8","UMLS:C0272013","DOID:8455","ICD9:266.1","NCIT:C85221","MESH:D026681","SCTID:86448001"],"synonyms":[{"name":"B6 deficiencies, vitamin","type":"related"},{"name":"B6 deficiency, vitamin","type":"related"},{"name":"B6 vitamin deficiencies","type":"related"},{"name":"B6 vitamin deficiency","type":"related"},{"name":"deficiencies, B6 vitamin","type":"related"},{"name":"deficiencies, vitamin B6","type":"related"},{"name":"deficiency, B6 vitamin","type":"related"},{"name":"deficiency, pyridoxine","type":"related"},{"name":"deficiency, vitamin B 6","type":"related"},{"name":"deficiency, vitamin B6","type":"related"},{"name":"pyridoxine Deficincy","type":"exact"},{"name":"pyridoxine deficiency","type":"related"},{"name":"vitamin B6 deficiencies","type":"related"},{"name":"vitamin B6 deficiency","type":"related"},{"name":"vitamin B6 deficiency syndrome","type":"exact"},{"name":"vitamin deficiencies, B6","type":"related"},{"name":"vitamin deficiency, B6","type":"related"}],"termid":"MONDO:0004574","xrefs":{"Monarch":{"xref_id":"0004574"}}}


id: PBO:0075451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA3 antisense RNA 1 (head to head)","termid":"PBO:0075451"}


id: GO:0004032
data:
  {"annotated_genes":["SJAG_01869","SJAG_02010","SJAG_04660","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76070,91291],"is_not":false,"summary":null,"term":"GO:0004032"},{"annotations":[100705,95247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[95248,100706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+.","definition_xrefs":["EC:1.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:12789","KEGG_REACTION:R02820","Reactome:R-HSA-196060","Reactome:R-HSA-5652172"],"synonyms":[{"name":"aldehyde reductase activity","type":"related"},{"name":"alditol:NADP+ 1-oxidoreductase activity","type":"exact"},{"name":"aldose reductase activity","type":"related"},{"name":"polyol dehydrogenase (NADP(+)) activity","type":"related"}],"termid":"GO:0004032","terms_by_termid":{"GO:0004032":null,"GO:0032866":null,"GO:0032867":null}}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: GO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1-hydroxycyclohexan-1-yl)acetyl-CoA = acetyl-CoA + cyclohexanone.","definition_xrefs":["EC:4.1.3.35","RHEA:23868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA lyase activity","secondary_identifiers":["KEGG_REACTION:R02232","MetaCyc:4.1.3.35-RXN"],"synonyms":[{"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA cyclohexanone-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(1-hydroxycyclohexan-1-yl)acetyl-CoA cyclohexanone-lyase activity","type":"related"}],"termid":"GO:0047446"}


id: PBO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoprotein 3 family (predicted)","termid":"PBO:0001007"}


id: PBO:0024850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf2","termid":"PBO:0024850"}


id: PBO:0026834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(U)_polymerase_activity","termid":"PBO:0026834"}


id: GO:0140947
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110070],"is_not":false,"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6,N6-dimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the dimethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016740","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"histone H3K9me2 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.366"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone H3K9me2 methylase activity","type":"exact"},{"name":"histone dimethyl-lysine(H3K9) N-methyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140947","terms_by_termid":{"GO:0140947":null}}


id: MONDO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant neoplasm with a poor response to therapy, usually presenting as stage III/IV disease. It is characterized by the presence of neoplastic cells with morphologic and immunophenotypic characteristics similar to those seen in mature histiocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytic and dendritic cell neoplasm","termid":"MONDO:0006247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic sarcoma","secondary_identifiers":["ICDO:9755/3","DOID:0080915","ICD10CM:C96.A","ONCOTREE:HS","icd11.foundation:1925254893","GARD:19080","icd11.foundation:911785965","UMLS:C0334663","SCTID:109988003","MESH:D054747","Orphanet:86896","MEDGEN:137793","NCIT:C27349","ICD9:171.9"],"synonyms":[{"name":"histiocytic sarcoma","type":"exact"},{"name":"sarcoma, histiocytic, malignant","type":"exact"}],"termid":"MONDO:0019479","xrefs":{"Monarch":{"xref_id":"0019479"}}}


id: PBO:0056207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B2","termid":"PBO:0056207"}


id: PBO:0051926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 8","termid":"PBO:0051926"}


id: MONDO:0010112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thalamic degeneration, symmetric infantile","secondary_identifiers":["MEDGEN:419748","OMIM:273490","MESH:C536504","Orphanet:3311","GARD:5160","UMLS:C2931220"],"synonyms":[{"name":"symmetric infantile thalamic degeneration","type":"related"},{"name":"symmetrical thalamic degeneration in infants","type":"related"},{"name":"thalamic degeneration, symmetric infantile","type":"exact"}],"termid":"MONDO:0010112","xrefs":{"Monarch":{"xref_id":"0010112"}}}


id: PBO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-Mg/Pi carrier (predicted)","termid":"PBO:0005628"}


id: MONDO:0021008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiphospholipid syndrome that occurs alongside another autoimmune disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"secondary antiphospholipid syndrome","secondary_identifiers":["UMLS:C0409983","MEDGEN:592743","SCTID:239895006","icd11.foundation:138987181","ICD9:795.79"],"termid":"MONDO:0021008","xrefs":{"Monarch":{"xref_id":"0021008"}}}


id: PBO:0067851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 153","termid":"PBO:0067851"}


id: GO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydroxylation of jasmonic acid to 12OH-jasmonic acid.","definition_xrefs":["PMID:28559313","PMID:28760569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"jasmonic acid hydrolase","synonyms":[{"name":"2-oxoglutarate dioxygenase","type":"broad"}],"termid":"GO:0120091"}


id: GO:0009157
data:
  {"annotated_genes":["SJAG_04627","SJAG_04487","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71664,81253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[81276,71663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009157","terms_by_termid":{"GO:0006226":null,"GO:0006231":null}}


id: GO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide group to an amino acid within a protein.","definition_xrefs":["PMID:20972426","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nitrosylation","synonyms":[{"name":"protein amino acid nitrosylation","type":"exact"}],"termid":"GO:0017014"}


id: PBO:0080673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP homolog associated with actin, golgi membranes and microtubules","termid":"PBO:0080673"}


id: PBO:0038748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin family pseudogene 1","termid":"PBO:0038748"}


id: GO:1904124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a microglial cell from one site to another.","definition_xrefs":["GOC:TermGenie","GO_REF:0000091","GOC:BHF","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell migration","termid":"GO:1904124"}


id: PBO:0085842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085842"}


id: MONDO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic epithelial neoplasm characterized by the presence of columnar mucin-producing epithelial cells, ovarian-type stroma formation, and a focal or extensive invasive carcinomatous component.","definition_xrefs":["NCIT:C41246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic mucinous cystadenocarcinoma","termid":"MONDO:0004156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:7236","MEDGEN:309550","ICDO:8470/3","UMLS:C1518870"],"synonyms":[{"name":"pancreatic invasive mucinous cystadenocarcinoma","type":"exact"},{"name":"pancreatic mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","type":"exact"}],"termid":"MONDO:0004158","xrefs":{"Monarch":{"xref_id":"0004158"}}}


id: PBO:0041277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF3-AMACR readthrough (NMD candidate)","termid":"PBO:0041277"}


id: PBO:0040091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member K","termid":"PBO:0040091"}


id: PBO:0053269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LILRA2 pseudogene 1","termid":"PBO:0053269"}


id: GO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The crossing by the virus of the host nuclear membrane, either as naked viral genome or for small viruses as an intact capsid.","definition_xrefs":["PMID:22929056","VZ:989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral penetration into host nucleus","synonyms":[{"name":"viral entry into host nucleus","type":"exact"},{"name":"viral import into host nucleus","type":"exact"}],"termid":"GO:0075732"}


id: GO:2000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA selective glutamate receptor activity.","definition_xrefs":["PMID:21423165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of AMPA receptor activity","termid":"GO:2000311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0023052"],"is_obsolete":false,"name":"positive regulation of AMPA receptor activity","synonyms":[{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"broad"}],"termid":"GO:2000969"}


id: MONDO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.","definition_xrefs":["NCIT:C3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congestive heart failure","secondary_identifiers":["ICD9:428.9","icd11.foundation:2136808878","EFO:0000373","DOID:6000","ICD9:404.11","ICD9:404.13","ICD9:404.01","ICD9:428.0","SCTID:42343007","HP:0001635","MEDGEN:9169","ICD9:428","UMLS:C0018802"],"synonyms":[{"name":"cardiac failure, congestive","type":"exact"},{"name":"congestive heart disease","type":"exact"},{"name":"failure, congestive heart","type":"exact"},{"name":"heart failure, congestive","type":"exact"},{"name":"weak heart","type":"exact"},{"name":"CHF","type":"exact"}],"termid":"MONDO:0005009","xrefs":{"Monarch":{"xref_id":"0005009"}}}


id: PBO:0074953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-4","termid":"PBO:0074953"}


id: GO:2000033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed dormancy process.","definition_xrefs":["GOC:pr","ISBN:9781405139830","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed dormancy process","synonyms":[{"name":"regulation of seed dormancy","type":"related"}],"termid":"GO:2000033"}


id: MONDO:0016708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal tumor of neuroepithelial tissue (obsolete MONDO:0016708)","secondary_identifiers":["Orphanet:251852"],"termid":"MONDO:0016708","xrefs":{"Monarch":{"xref_id":"0016708"}}}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["GOC:jh2","PMID:23093773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: PBO:0066998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL2","termid":"PBO:0066998"}


id: MONDO:0011766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY gonadal dysgenesis-motor and sensory neuropathy syndrome","secondary_identifiers":["UMLS:C5436061","MEDGEN:1727162","MESH:C567773","OMIM:607080","GARD:17034","Orphanet:168563"],"synonyms":[{"name":"46,XY gonadal dysgenesis, partial, with MINIFASCICULAR neuropathy","type":"related"},{"name":"46XY gonadal dysgenesis with minifascicular neuropathy","type":"exact"}],"termid":"MONDO:0011766","xrefs":{"Monarch":{"xref_id":"0011766"}}}


id: MONDO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign perivascular tumor","secondary_identifiers":["DOID:5238","NCIT:C6529","UMLS:C1332532","MEDGEN:231437"],"synonyms":[{"name":"benign Pericytic neoplasm","type":"exact"},{"name":"benign Pericytic tumor","type":"exact"},{"name":"benign Pericytic tumour","type":"exact"},{"name":"benign pericytic neoplasm","type":"exact"},{"name":"benign perivascular neoplasm","type":"exact"},{"name":"benign perivascular tumor","type":"exact"},{"name":"pericytic neoplasm, benign","type":"exact"}],"termid":"MONDO:0003342","xrefs":{"Monarch":{"xref_id":"0003342"}}}


id: GO:0055117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}


id: PBO:0066515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of cell cycle","termid":"PBO:0066515"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: FYPO:0006801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype  observed in the vegetative growth phase of the life cycle in which cells contain more spindle pole bodies (SPBs) than normal. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PMID:9763447","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during vegetative growth","synonyms":[{"name":"SPBs present in increased numbers during vegetative growth","type":"exact"},{"name":"excess mitotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during vegetative growth","type":"exact"},{"name":"extra spindle pole bodies present during vegetative growth","type":"exact"},{"name":"multiple mitotic spindle pole bodies","type":"exact"},{"name":"overreplicated mitotic spindle pole bodies","type":"related"},{"name":"spindle pole bodies present in greater numbers during vegetative growth","type":"exact"},{"name":"spindle pole bodies present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006801"}


id: PBO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2518","termid":"PBO:0055100"}


id: PBO:0078492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 11-1","termid":"PBO:0078492"}


id: FYPO:0000886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000886"}


id: PBO:0049068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR84, ZNF385A, ITGA5 and GTSF1 antisense RNA 1","termid":"PBO:0049068"}


id: GO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein biosynthetic process","termid":"GO:0042984"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"activation of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"positive regulation of APP biosynthesis","type":"exact"},{"name":"positive regulation of APP biosynthetic process","type":"exact"},{"name":"positive regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"positive regulation of amyloid precursor protein formation","type":"exact"},{"name":"positive regulation of amyloid precursor protein synthesis","type":"exact"},{"name":"stimulation of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"up regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"upregulation of amyloid precursor protein biosynthetic process","type":"exact"}],"termid":"GO:0042986"}


id: PBO:0054638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2043","termid":"PBO:0054638"}


id: GO:0006119
data:
  {"annotated_genes":["SJAG_03490","SJAG_07007","SJAG_02744","SJAG_00836","SJAG_02398","SJAG_01490","SJAG_02564","SJAG_05629","SJAG_00755","SJAG_MIT04","SJAG_04122","SJAG_MIT09","SJAG_02504","SJAG_01190","SJAG_01355","SJAG_07006","SJAG_07003","SJAG_02646","SJAG_01077","SJAG_00438","SJAG_01763","SJAG_05204","SJAG_00601","SJAG_00542","SJAG_03925","SJAG_00080","SJAG_03920","SJAG_00133","SJAG_MIT15","SJAG_MIT03","SJAG_00915","SJAG_00985","SJAG_04152","SJAG_01671","SJAG_02105","SJAG_03114","SJAG_00976","SJAG_MIT37","SJAG_00260","SJAG_MIT13","SJAG_MIT20","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78219,80665,76014,62493,107846,73598,115060,118660,118682,113826,118711],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[112446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006120"},{"annotations":[88647,112785,88273,116360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[75524,78218,117294,77454,112992,118687,73937,103606,77536,62459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[101343,104557,107457,94336,107365,108355,92755,92328,118692,118698,118704,103181,88591,102564,103207,115447,93346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"}]},"cv_name":"biological_process","definition":"The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["ISBN:0471331309","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02105":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03114":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"oxidative phosphorylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Oxidative_phosphorylation"],"synonyms":[{"name":"respiratory-chain phosphorylation","type":"exact"}],"termid":"GO:0006119","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0042776":null}}


id: GO:0045666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"positively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron differentiation","synonyms":[{"name":"activation of neuron differentiation","type":"narrow"},{"name":"stimulation of neuron differentiation","type":"narrow"},{"name":"up regulation of neuron differentiation","type":"exact"},{"name":"up-regulation of neuron differentiation","type":"exact"},{"name":"upregulation of neuron differentiation","type":"exact"}],"termid":"GO:0045666"}


id: GO:0106313
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96149,97914],"is_not":false,"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADPH + H+.","definition_xrefs":["RHEA:19817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase [NAD(P)H] activity","termid":"GO:0004489"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.53","MetaCyc:RXN-21991"],"termid":"GO:0106313","terms_by_termid":{"GO:0106313":null}}


id: PR:O36027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neural Wiskott-Aldrich syndrome protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wiskott-Aldrich syndrome protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.15c","secondary_identifiers":["UniProtKB:O36027"],"synonyms":[{"name":"SPAC4F10.15c","type":"related"},{"name":"Spom972h-WASL","type":"exact"}],"termid":"PR:O36027"}


id: GO:0006600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"creatine metabolic process","secondary_identifiers":["Reactome:R-HSA-71288"],"synonyms":[{"name":"creatine metabolism","type":"exact"}],"termid":"GO:0006600"}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["PMID:19746965","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: MONDO:0021082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileal neoplasm","termid":"MONDO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum neoplasm","secondary_identifiers":["SCTID:126836001","MEDGEN:577167","UMLS:C0345839"],"synonyms":[{"name":"Meckel's diverticulum neoplasm","type":"exact"},{"name":"Meckel's diverticulum neoplasm (disease)","type":"exact"},{"name":"Meckel's diverticulum tumor","type":"exact"},{"name":"Meckel's diverticulum tumour","type":"exact"},{"name":"neoplasm of Meckel's diverticulum","type":"exact"},{"name":"tumor of Meckel's diverticulum","type":"exact"},{"name":"tumour of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0021082","xrefs":{"Monarch":{"xref_id":"0021082"}}}


id: GO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic adenosine monophosphate + H2O = cyclic inosine monophosphate + NH3.","definition_xrefs":["PMID:24074367","RHEA:22908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cAMP deaminase activity","secondary_identifiers":["EC:3.5.4.46"],"synonyms":[{"name":"cyclic adenosine monophosphate deaminase activity","type":"exact"}],"termid":"GO:0090612"}


id: FYPO:0002144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002144)","synonyms":[{"name":"increased protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"increased protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"increased protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002144"}


id: PBO:0041479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 80","termid":"PBO:0041479"}


id: FYPO:0004190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to ionizing radiation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein accumulation during cellular response to ionizing radiation","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004190"}


id: PBO:0003659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURF-family protein Shy1 (predicted)","termid":"PBO:0003659"}


id: MONDO:0006509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm characterized by a papillary growth pattern. A papillary carcinoma may be composed of glandular cells (papillary adenocarcinoma), squamous cells (papillary squamous cell carcinoma), or transitional cells (papillary transitional cell carcinoma). Bladder carcinoma is a representative example of papillary transitional cell carcinoma.","definition_xrefs":["NCIT:C2927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma","secondary_identifiers":["UMLS:C0007133","DOID:3113","ICDO:8050/3","MEDGEN:40105","MESH:D002291","EFO:1000646"],"synonyms":[{"name":"papillary carcinoma","type":"exact"},{"name":"papillary carcinoma (morphologic abnormality)","type":"exact"},{"name":"papillary carcinoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006509","xrefs":{"Monarch":{"xref_id":"0006509"}}}


id: PBO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressed by thiamine","termid":"PBO:0003192"}


id: MONDO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Vibrio vulnificus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibrio infectious disease","termid":"MONDO:0007014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vibrio vulnificus infectious disease","secondary_identifiers":["MEDGEN:220886","SCTID:402965002","UMLS:C1274377","MESH:C536348"],"synonyms":[{"name":"Vibrio vulnificus caused disease or disorder","type":"exact"},{"name":"Vibrio vulnificus disease or disorder","type":"exact"},{"name":"Vibrio vulnificus infectious disease","type":"exact"},{"name":"vibrio vulnificus infection","type":"exact"},{"name":"vibrio vulnificus infectious disease","type":"exact"}],"termid":"MONDO:0043297","xrefs":{"Monarch":{"xref_id":"0043297"}}}


id: MONDO:0019385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid-responsive encephalopathy associated with autoimmune thyroiditis (SREAT) is a rare, acquired, neurological disease characterized by encephalopathy associated with elevated antithyroid antibodies, in the absence of other causes. Clinical presentation varies from minor cognitive impairment to status epilepticus and coma, and frequently includes seizures, confusion, speech disorder, memory impairment, ataxia and psychiatric manifestations.","definition_xrefs":["Orphanet:83601"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired ataxia","termid":"MONDO:0016593"},{"relation_name":"excluded_subClassOf","term_name":"antibody mediated epilepsy","termid":"MONDO:0100029"},{"relation_name":"is_a","term_name":"postinfectious encephalitis","termid":"MONDO:0020068"},{"relation_name":"is_a","term_name":"autoimmune encephalitis","termid":"MONDO:0020640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"steroid-responsive encephalopathy associated with autoimmune thyroiditis","secondary_identifiers":["GARD:8570","MEDGEN:98280","MESH:C535841","UMLS:C0393639"],"synonyms":[{"name":"Hashimoto encephalitis","type":"related"},{"name":"Hashimoto's encephalitis","type":"related"},{"name":"Hashimoto's encephalopathy","type":"related"},{"name":"SREAT","type":"exact"},{"name":"steroid-responsive encephalopathy associated with thyroid disease","type":"broad"}],"termid":"MONDO:0019385","xrefs":{"Monarch":{"xref_id":"0019385"}}}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: GO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-ornithine transmembrane export from vacuole","termid":"GO:0089706"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: PBO:0042232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 4 (pseudogene)","termid":"PBO:0042232"}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: PATO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000236 odor type (obsolete PATO:0000236)","termid":"PATO:0000236"}


id: PBO:0069004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 248, pseudogene","termid":"PBO:0069004"}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: MONDO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by a fungus.","definition_xrefs":["NCIT:C3245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal infectious disease","secondary_identifiers":["ICD9:117.9","ICD10CM:B35-B49","ICD9:110-118.99","MESH:D009181","DOID:1564","SCTID:3218000","MEDGEN:6486","UMLS:C0026946"],"synonyms":[{"name":"Fungi caused disease or disorder","type":"exact"},{"name":"Fungi disease or disorder","type":"exact"},{"name":"Fungi infection","type":"exact"},{"name":"Fungi infectious disease","type":"exact"},{"name":"fungal infection","type":"related"},{"name":"infection, fungal","type":"related"},{"name":"infections, Fungi","type":"related"},{"name":"mycoses","type":"related"},{"name":"mycosis","type":"exact"}],"termid":"MONDO:0002041","xrefs":{"Monarch":{"xref_id":"0002041"}}}


id: GO:0043500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle","PMID:12605307","PMID:11449884","PMID:11181628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle adaptation","synonyms":[{"name":"muscle plasticity","type":"related"}],"termid":"GO:0043500"}


id: GO:0071721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of thromboxanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A thromboxane is any of a class of oxygenated oxane derivatives, originally derived from prostaglandin precursors in platelets, that stimulate aggregation of platelets and constriction of blood vessels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thromboxane transport","termid":"GO:0071717"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sodium-independent thromboxane transport","termid":"GO:0071721"}


id: PBO:0074892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 67","termid":"PBO:0074892"}


id: PBO:0012528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_specification_of","termid":"PBO:0012528"}


id: PBO:0080331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 95 pseudogene","termid":"PBO:0080331"}


id: PBO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1B transcriptional repressor","termid":"PBO:0048548"}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: GO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.","definition_xrefs":["RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-protein covalent cross-linking","termid":"GO:0018144"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking via peptidyl-serine","termid":"GO:0018259"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: PBO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces","termid":"PBO:0014613"}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: PR:O13955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vam6/Vps39-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.14","secondary_identifiers":["UniProtKB:O13955"],"synonyms":[{"name":"Spom972h-VPS39","type":"exact"},{"name":"vacuolar protein sorting-associated protein 39 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13955"}


id: PBO:0012002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs1","termid":"PBO:0012002"}


id: PBO:0086689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; includes a potential transmembrane domain; deletion results in slightly lengthened telomeres; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086689"}


id: PBO:0036085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_double-strand_break_processing","termid":"PBO:0036085"}


id: GO:0101021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + reduced [NADPH--hemoprotein reductase] + O2 = 2-hydroxyestrogen + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:BHF","GOC:rl","PMID:14559847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"estrogen 2-hydroxylase activity","synonyms":[{"name":"oestrogen 2-hydroxylase activity","type":"exact"}],"termid":"GO:0101021"}


id: MONDO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly of fingers is a limb malformation syndrome characterized by the attachment of a superfluous digit on the first digit. Four types have been defined: Type I (PPD1 or biphalangeal thumb polydactyly) which shows duplication of one or more skeletal components of a biphalangeal thumb; type II (PPD2 or polydactyly of a triphalangeal thumb) which involves the presence of a usually opposable triphalangeal thumb with or without additional duplication of thumb; type III (PPD3 or polydactyly of an index finger) where the thumb is replaced by one or two triphalangeal digits with dermatoglyphic pattern specific for the index finger; and type IV (PPD4 or polysyndactyly) which shows variably mild degrees of thumb duplication and variable syndactyly between 3rd and 4th fingers. Among the four types, PPD1 is the most frequent form. Preaxial polydactyly of fingers is caused by disruptions to the developmental patterning of the limb along the anterior-posterior axis that lead to changes in digit number and identity.","definition_xrefs":["Orphanet:294939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly of fingers","secondary_identifiers":["icd11.foundation:1066753144","GARD:12767","OMIMPS:174400","MEDGEN:87498","UMLS:C0345354"],"synonyms":[{"name":"preaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017425","xrefs":{"Monarch":{"xref_id":"0017425"}}}


id: GO:0046292
data:
  {"annotated_genes":["SJAG_05256","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95029,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde metabolism","type":"exact"},{"name":"methanal metabolic process","type":"exact"},{"name":"methanal metabolism","type":"exact"}],"termid":"GO:0046292","terms_by_termid":{"GO:0046294":null}}


id: PBO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase (predicted)","termid":"PBO:0005735"}


id: GO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of vascular endothelial growth factor (VEGF).","definition_xrefs":["GOC:BHF","GOC:rph","PMID:21885851","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090667"}


id: PBO:0077439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 174","termid":"PBO:0077439"}


id: MONDO:0006057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic lymphoma (obsolete MONDO:0006057)","termid":"MONDO:0006057","xrefs":{"Monarch":{"xref_id":"0006057"}}}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: GO:0008453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine.","definition_xrefs":["EC:2.6.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alanine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-904864","RHEA:24248","Reactome:R-HSA-389684"],"synonyms":[{"name":"AGT activity","type":"related"},{"name":"L-alanine-glycine transaminase activity","type":"related"},{"name":"L-alanine:glyoxylate aminotransferase activity","type":"related"},{"name":"alanine--glyoxylate aminotransferase activity","type":"related"},{"name":"alanine-glyoxylate aminotransferase activity","type":"exact"},{"name":"alanine-glyoxylic aminotransferase activity","type":"related"}],"termid":"GO:0008453"}


id: GO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to an antigenic stimulus. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"},{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}


id: GO:1900138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase A2 activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"},{"relation_name":"is_a","term_name":"negative regulation of lipase activity","termid":"GO:0060192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase A2 activity","synonyms":[{"name":"down regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down regulation of lecithinase A activity","type":"exact"},{"name":"down regulation of phosphatidase activity","type":"related"},{"name":"down regulation of phosphatidolipase activity","type":"exact"},{"name":"down regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down regulation of phospholipase A","type":"related"},{"name":"down regulation of phospholipase A2 activity","type":"exact"},{"name":"down regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of lecithinase A activity","type":"exact"},{"name":"down-regulation of phosphatidase activity","type":"related"},{"name":"down-regulation of phosphatidolipase activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase A","type":"related"},{"name":"down-regulation of phospholipase A2 activity","type":"exact"},{"name":"down-regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"downregulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"downregulation of lecithinase A activity","type":"exact"},{"name":"downregulation of phosphatidase activity","type":"related"},{"name":"downregulation of phosphatidolipase activity","type":"exact"},{"name":"downregulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"downregulation of phospholipase A","type":"related"},{"name":"downregulation of phospholipase A2 activity","type":"exact"},{"name":"downregulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"inhibition of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"inhibition of lecithinase A activity","type":"narrow"},{"name":"inhibition of phosphatidase activity","type":"related"},{"name":"inhibition of phosphatidolipase activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine 2-acylhydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase A","type":"related"},{"name":"inhibition of phospholipase A2 activity","type":"narrow"},{"name":"inhibition of secreted phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of lecithinase A activity","type":"exact"},{"name":"negative regulation of phosphatidase activity","type":"related"},{"name":"negative regulation of phosphatidolipase activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"negative regulation of phospholipase A","type":"related"},{"name":"negative regulation of secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:1900138"}


id: PBO:0078997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 4-1","termid":"PBO:0078997"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: MONDO:0859576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"},{"relation_name":"is_a","term_name":"Atelis syndrome","termid":"MONDO:0859393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atelis syndrome 2","secondary_identifiers":["OMIM:620185","UMLS:C5774282","MEDGEN:1824055"],"termid":"MONDO:0859576","xrefs":{"Monarch":{"xref_id":"0859576"}}}


id: GO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myosin-light-chain = ADP + myosin-light-chain phosphate.","definition_xrefs":["EC:2.7.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0004672","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"myosin light chain kinase activity","secondary_identifiers":["MetaCyc:2.7.11.18-RXN","Reactome:R-HSA-445813","Reactome:R-HSA-5668978","RHEA:22004"],"synonyms":[{"name":"ATP:myosin-light-chain O-phosphotransferase","type":"broad"},{"name":"ATP:myosin-light-chain O-phosphotransferase activity","type":"related"},{"name":"MLCK","type":"related"},{"name":"MLCkase activity","type":"related"},{"name":"STK18","type":"related"},{"name":"calcium/calmodulin-dependent myosin light chain kinase activity","type":"related"},{"name":"myosin kinase activity","type":"related"},{"name":"myosin light chain protein kinase activity","type":"related"},{"name":"myosin light-chain kinase","type":"broad"},{"name":"myosin light-chain kinase (phosphorylating)","type":"related"},{"name":"myosin light-chain kinase (phosphorylating) activity","type":"related"},{"name":"myosin light-chain kinase activity","type":"related"},{"name":"myosin-light-chain kinase activity","type":"exact"},{"name":"smooth-muscle-myosin-light-chain kinase activity","type":"narrow"}],"termid":"GO:0004687"}


id: GO:2000768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nephron tubule epithelial cell differentiation","termid":"GO:2000768"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: PBO:0077784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 2","termid":"PBO:0077784"}


id: GO:0014021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the neural tube by coalescence of mesenchymal cells followed by their conversion to epithelial cells to form a solid cord that subsequently hollows out (cavitates) to create a hollow tube. Secondary neurulation is the typical mechanism of formation of the neural tube posterior to the posterior neuropore in mammals.","definition_xrefs":["ISBN:0878932585","PMID:15327780","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube formation","termid":"GO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary neural tube formation","secondary_identifiers":["GO:0014026","GO:0014027"],"synonyms":[{"name":"medullary cord biosynthesis","type":"exact"},{"name":"medullary cord formation","type":"exact"},{"name":"medullary rod cavitation","type":"related"},{"name":"neural rod formation","type":"related"},{"name":"secondary neural tube rod cavitation","type":"related"},{"name":"secondary neurulation","type":"exact"}],"termid":"GO:0014021"}


id: PBO:0057454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 573","termid":"PBO:0057454"}


id: GO:0039016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the pronephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in pronephros development","synonyms":[{"name":"cell-cell signaling involved in pronephric kidney development","type":"exact"},{"name":"cell-cell signalling involved in pronephros development","type":"exact"}],"termid":"GO:0039016"}


id: GO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid dendritic cell in response to an external stimulus.","definition_xrefs":["PMID:16056255","ISBN:0781735149","GOC:add","PMID:15814331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: GO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic primary alcohol + O2 = an aromatic aldehyde + H2O2.","definition_xrefs":["EC:1.1.3.7","MetaCyc:ARYL-ALCOHOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aryl-alcohol oxidase activity","secondary_identifiers":["RHEA:17541"],"synonyms":[{"name":"arom. alcohol oxidase activity","type":"related"},{"name":"aryl alcohol oxidase activity","type":"related"},{"name":"aryl-alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"veratryl alcohol oxidase activity","type":"narrow"}],"termid":"GO:0047682"}


id: MONDO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 4","secondary_identifiers":["UMLS:C3554560","GARD:18085","MEDGEN:767474","OMIM:615127","DOID:0111693"],"synonyms":[{"name":"FAME4","type":"exact"},{"name":"cortical myoclonic tremor with epilepsy, familial, 4","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 4","type":"related"},{"name":"epilepsy, myoclonic, familial adult, 4","type":"exact"}],"termid":"MONDO:0014055","xrefs":{"Monarch":{"xref_id":"0014055"}}}


id: PBO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal could be generated by overlap of UTRs","termid":"PBO:0000150"}


id: GO:0103071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA = formyl-CoA + a 2-methyl branched 2,3,4-saturated fatty aldehyde.","definition_xrefs":["GOC:pz","EC:4.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA lyase activity (obsolete GO:0103071)","termid":"GO:0103071"}


id: PBO:0057050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 137","termid":"PBO:0057050"}


id: PBO:0059448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 2","termid":"PBO:0059448"}


id: MONDO:0013257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leprosy","termid":"MONDO:0005124"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 6","secondary_identifiers":["UMLS:C3150676","MEDGEN:462026","OMIM:613407"],"synonyms":[{"name":"LPRS6","type":"exact"},{"name":"leprosy, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013257","xrefs":{"Monarch":{"xref_id":"0013257"}}}


id: PBO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase alpha","termid":"PBO:0044534"}


id: FYECO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a MAP kinase inhibitor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MAP kinase inhibitor","synonyms":[{"name":"SP600125","type":"narrow"},{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000452"}


id: PBO:0082261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid transporter for valine, leucine, isoleucine, and tyrosine; low-affinity tryptophan and histidine transporter; overexpression confers FK506 and FTY720 resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0082261"}


id: PBO:0064249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plectin","termid":"PBO:0064249"}


id: GO:2001259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of cation channel activity","synonyms":[{"name":"positive regulation of cation diffusion facilitator activity","type":"exact"},{"name":"positive regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001259"}


id: PBO:0053768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1013","termid":"PBO:0053768"}


id: PBO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transporter (predicted)","termid":"PBO:0004878"}


id: MONDO:0017623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of clinically heterogeneous disorders united by a germline PTEN mutation and the involvement of derivatives of all 3 germ cell layers, manifesting with hamartomas, overgrowth and neoplasia. Currently, subsets carrying clinical diagnoses of Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome, Proteus and Proteus-like syndromes and SOLAMEN syndrome belong to PHTS.","definition_xrefs":["Orphanet:306498"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN hamartoma tumor syndrome","secondary_identifiers":["UMLS:C1959582","GARD:12800","DOID:0080191","MEDGEN:368366","NCIT:C179915","NORD:1631","SCTID:722859001"],"synonyms":[{"name":"PHTS","type":"exact"},{"name":"PTEN hamartoma tumor syndrome","type":"exact"}],"termid":"MONDO:0017623","xrefs":{"Monarch":{"xref_id":"0017623"}}}


id: PBO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase 2","termid":"PBO:0061159"}


id: PBO:0050690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 17","termid":"PBO:0050690"}


id: PR:O74894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF8","OMA:SCHPO04939","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6B homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.10c","secondary_identifiers":["UniProtKB:O74894"],"synonyms":[{"name":"Spom972h-PSMC4","type":"exact"}],"termid":"PR:O74894"}


id: MONDO:0005073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of melanocytes that usually appears as a dark spot on the skin.","definition_xrefs":["NCIT:C7570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"melanocytic skin neoplasm","termid":"MONDO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanocytic nevus","secondary_identifiers":["EFO:0009675","SCTID:400096001","MESH:D009506","UMLS:C0027962","Wikipedia:Nevus","MEDGEN:14364"],"synonyms":[{"name":"melanocytic Nevus","type":"exact"},{"name":"melanotic Nevus","type":"exact"},{"name":"mole","type":"exact"},{"name":"mole of skin","type":"exact"},{"name":"nevus","type":"exact"}],"termid":"MONDO:0005073","xrefs":{"Monarch":{"xref_id":"0005073"}}}


id: GO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate. This reaction is the eliminative cleavage of 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate from the reducing end of pectate, i.e. de-esterified pectin.","definition_xrefs":["EC:4.2.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"pectate disaccharide-lyase activity","secondary_identifiers":["MetaCyc:4.2.2.9-RXN","RHEA:57104"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan reducing-end-disaccharide-lyase activity","type":"related"},{"name":"Exo-PATE activity","type":"related"},{"name":"Exo-PGL activity","type":"related"},{"name":"PATE activity","type":"related"},{"name":"exo-PATE","type":"related"},{"name":"exo-PGL","type":"related"},{"name":"exopectate lyase activity","type":"related"},{"name":"exopectic acid transeliminase activity","type":"related"},{"name":"exopolygalacturonate lyase activity","type":"related"},{"name":"exopolygalacturonic acid-trans-eliminase activity","type":"related"},{"name":"pectate exo-lyase activity","type":"related"}],"termid":"GO:0047489"}


id: PBO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011460"}


id: PBO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 163 member A","termid":"PBO:0047116"}


id: GO:0009446
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"putrescine anabolism","type":"exact"},{"name":"putrescine biosynthesis","type":"exact"},{"name":"putrescine formation","type":"exact"},{"name":"putrescine synthesis","type":"exact"}],"termid":"GO:0009446","terms_by_termid":{"GO:0033387":null}}


id: PBO:0076835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 2","termid":"PBO:0076835"}


id: MONDO:0006246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive high grade malignant bone-forming mesenchymal neoplasm arising from the surface of the bone.","definition_xrefs":["NCIT:C53958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral osteosarcoma","termid":"MONDO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high grade surface osteosarcoma","secondary_identifiers":["EFO:1000296","ICDO:9194/3","UMLS:C1266165","ONCOTREE:HGSOS","MEDGEN:220428"],"synonyms":[{"name":"high grade surface osteosarcoma","type":"exact"},{"name":"high-grade surface osteosarcoma","type":"related"}],"termid":"MONDO:0006246","xrefs":{"Monarch":{"xref_id":"0006246"}}}


id: MONDO:0016179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired amyloid peripheral neuropathy (obsolete MONDO:0016179)","secondary_identifiers":["Orphanet:209013"],"termid":"MONDO:0016179","xrefs":{"Monarch":{"xref_id":"0016179"}}}


id: PR:O74309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm9 gene.","definition_xrefs":["UniProtKB:O74309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator slm9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.03","synonyms":[{"name":"Spom972h-slm9","type":"exact"}],"termid":"PR:O74309"}


id: GO:0009754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a jasmonic acid stimulus is received by a cell and converted into a molecular signal. Series of events required for a jasmonic acid stimulus to be detected and converted to a signal molecule.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of jasmonic acid stimulus","synonyms":[{"name":"perception of jasmonic acid stimulus","type":"related"}],"termid":"GO:0009754"}


id: PBO:0064638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-platelet basic protein pseudogene 1","termid":"PBO:0064638"}


id: SO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA or RNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aptamer","secondary_identifiers":["http://en.wikipedia.org/wiki/Aptamer"],"termid":"SO:0000031"}


id: PBO:0029558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_during_vegetative_growth","termid":"PBO:0029558"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: MONDO:0015296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiac anomalies-heterotaxy syndrome is characterized by non-compaction of the ventricular myocardium, bradycardia, pulmonary valve stenosis, and secundum atrial septal defect. Laterality sequence anomalies are also present. So far, the syndrome has been described in nine members from three generations of the same family. Transmission is autosomal dominant and linkage to chromosome 6p24.3-21.2 was reported.","definition_xrefs":["Orphanet:137628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac anomalies-heterotaxy syndrome","secondary_identifiers":["GARD:19883","UMLS:C4303970","MEDGEN:929639"],"termid":"MONDO:0015296","xrefs":{"Monarch":{"xref_id":"0015296"}}}


id: FYPO:0001525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-thialysine. Cells stop growing (and may die) at a concentration of L-thialysine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to L-thialysine","synonyms":[{"name":"hypersensitive to L-thialysine","type":"exact"},{"name":"sensitive to L-thialysine during mitotic cell cycle","type":"related"},{"name":"sensitive to L-thialysine during vegetative growth","type":"exact"},{"name":"sensitive to thialysine","type":"broad"}],"termid":"FYPO:0001525"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: FYPO:0000799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide. Cells stop growing (and may die) at a concentration of diamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to diamide","synonyms":[{"name":"hypersensitive to diamide","type":"exact"},{"name":"sensitive to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"sensitive to diamide during mitotic cell cycle","type":"related"},{"name":"sensitive to diamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000799"}


id: PBO:0038414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_transports_or_maintains_localization_of","termid":"PBO:0038414"}


id: PBO:0074098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 1","termid":"PBO:0074098"}


id: GO:0071407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organic cyclic compound (obsolete GO:0071407)","synonyms":[{"name":"cellular response to organic cyclic substance","type":"exact"}],"termid":"GO:0071407"}


id: GO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,2-bis(4-hydroxyphenyl)-1-propanol + NADH + H+ + O2 = 2,3-bis(4-hydroxyphenyl)-1,2-propanediol + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2-bis(4-hydroxyphenyl)-1-propanol hydroxylase activity (obsolete GO:0034562)","termid":"GO:0034562"}


id: PBO:0079986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 24","termid":"PBO:0079986"}


id: GO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = acylmono-beta-D-galactosyl-diacylglycerol + mono-beta-D-galactosylacylglycerol.","definition_xrefs":["EC:2.3.1.134","MetaCyc:GALACTOLIPID-O-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"galactolipid O-acyltransferase activity","synonyms":[{"name":"galactolipid:galactolipid acyltransferase activity","type":"related"},{"name":"mono-beta-D-galactosyldiacylglycerol:mono-beta-D-galactosyldiacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0047909"}


id: FYPO:0007795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase after the cells have undergone two rounds of cell division under nutrient-replete conditions. This arrest resembles that of wild-type cells under conditions of nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:17121544","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase without nutrient starvation","synonyms":[{"name":"two cell divisions prior to mitotic G1 arrest without nutrient starvation","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase without nutrient starvation","type":"exact"}],"termid":"FYPO:0007795"}


id: MONDO:0017446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"apodia","secondary_identifiers":["Orphanet:294986","SCTID:371197005","MEDGEN:488816","icd11.foundation:1419324219","GARD:21197","UMLS:C0265624"],"synonyms":[{"name":"congenital absence of foot","type":"exact"}],"termid":"MONDO:0017446","xrefs":{"Monarch":{"xref_id":"0017446"}}}


id: PBO:0029000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_septation","termid":"PBO:0029000"}


id: GO:0019682
data:
  {"annotated_genes":["SJAG_00070","SJAG_03174","SJAG_04263","SJAG_04192","SJAG_00501","SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[76297,75536,107988,103887,74885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03174":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate metabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate metabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate metabolism","type":"exact"}],"termid":"GO:0019682","terms_by_termid":{"GO:0009052":null,"GO:0046166":null}}


id: FYPO:0002107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable stubby vegetative cell","synonyms":[{"name":"inviable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped vegetative cell","type":"exact"},{"name":"lethal; stubby vegetative cell","type":"exact"},{"name":"stubby inviable cell during vegetative growth","type":"exact"},{"name":"stubby inviable vegetative cell","type":"exact"}],"termid":"FYPO:0002107"}


id: MONDO:0013781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the KLHL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2D","secondary_identifiers":["UMLS:C3469605","GARD:17372","MEDGEN:483335","OMIM:614495","Orphanet:300525","icd11.foundation:1679339588"],"synonyms":[{"name":"KLHL3 pseudohypoaldosteronism type 2","type":"exact"},{"name":"PHA2D","type":"exact"},{"name":"familial hyperkalemic hypertension","type":"related"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in KLHL3","type":"exact"},{"name":"pseudohypoaldosteronism, type 2D","type":"related"},{"name":"pseudohypoaldosteronism, type IID","type":"related"}],"termid":"MONDO:0013781","xrefs":{"Monarch":{"xref_id":"0013781"}}}


id: GO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD+ = FMN + NADH + 2 H+.","definition_xrefs":["RHEA:21620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN reductase [NAD(P)H] activity","termid":"GO:0008752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FMN reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R05705","EC:1.5.1.42"],"synonyms":[{"name":"NADH dehydrogenase (FMN) activity","type":"exact"},{"name":"NADH-FMN reductase activity","type":"related"},{"name":"NADH-dependent FMN reductase activity","type":"related"}],"termid":"GO:0052874"}


id: GO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine catabolic process","termid":"GO:0006554"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-lysine metabolic process","termid":"GO:0046441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-lysine catabolic process","synonyms":[{"name":"D-lysine breakdown","type":"exact"},{"name":"D-lysine catabolism","type":"exact"},{"name":"D-lysine degradation","type":"exact"}],"termid":"GO:0019476"}


id: GO:0030292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of a protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine kinase inhibitor activity","termid":"GO:0030292"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:19186060","GOC:ha","PMID:12951076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: PBO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Ufd2 (predicted)","termid":"PBO:0017632"}


id: FYPO:0005209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore","synonyms":[{"name":"abnormal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005209"}


id: PR:Q9UTL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 710 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor IIIA (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.09c","secondary_identifiers":["UniProtKB:Q9UTL5"],"synonyms":[{"name":"Spom972h-ZNF710","type":"exact"},{"name":"TFIIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL5"}


id: PBO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spore_germination_frequency","termid":"PBO:0031630"}


id: MOD:01155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a lipid-like group either through acylation, alkylation, or amidation.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoconjugated residue","termid":"MOD:01155"}


id: MONDO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by the presence of extremely hypoplastic gonads preventing the development of secondary sex characteristics.","definition_xrefs":["NCIT:C61420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonadal dysgenesis","secondary_identifiers":["MEDGEN:9075","SCTID:205681004","GARD:2538","MESH:D006059","UMLS:C0018051","DOID:14447","ICD9:758.6"],"synonyms":[{"name":"gonadal dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0001967","xrefs":{"Monarch":{"xref_id":"0001967"}}}


id: MOD:01572
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01572"}


id: MONDO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, p1pk system (obsolete MONDO:0044222)","secondary_identifiers":["OMIM:111400"],"synonyms":[{"name":"Nor Polyagglutination syndrome","type":"related"},{"name":"P phenotype","type":"related"},{"name":"P(1) phenotype","type":"related"},{"name":"P(2) phenotype","type":"related"},{"name":"P1(K) phenotype","type":"related"},{"name":"P2(K) phenotype","type":"related"},{"name":"blood group, P1PK system","type":"related"},{"name":"blood group, P1PK system, P(k) phenotype","type":"exact"},{"name":"blood group, P1Pk system, P(2) phenotype","type":"exact"},{"name":"blood group, P1Pk system, p phenotype","type":"exact"}],"termid":"MONDO:0044222","xrefs":{"Monarch":{"xref_id":"0044222"}}}


id: PBO:0041745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 2","termid":"PBO:0041745"}


id: GO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cytoskeleton","secondary_identifiers":["GO:0044054"],"synonyms":[{"name":"disruption by symbiont of host cytoskeleton","type":"related"},{"name":"modification by symbiont of host cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host cytoskeleton","type":"exact"},{"name":"rounding by symbiont of host cells","type":"narrow"}],"termid":"GO:0052039"}


id: GO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5138","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}


id: MONDO:0958239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia/coloboma 11","secondary_identifiers":["OMIM:620731","UMLS:C5935584","MEDGEN:1856733"],"termid":"MONDO:0958239","xrefs":{"Monarch":{"xref_id":"0958239"}}}


id: PBO:0083054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase II; AP4A phosphorylase involved in catabolism of bis(5'-nucleosidyl) tetraphosphates; APA2 has a paralog, APA1, that arose from the whole genome duplication","termid":"PBO:0083054"}


id: PBO:0034203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by_part_of","termid":"PBO:0034203"}


id: PR:O74958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH domain-containing protein mmi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.12c","synonyms":[{"name":"Spom972h-mmi1","type":"exact"},{"name":"meiotic mRNA interception protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74958"}


id: GO:0009448
data:
  {"annotated_genes":["SJAG_03434","SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57130],"is_not":false,"summary":null,"term":"GO:0009448"},{"annotations":[86884,87876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"gamma-aminobutyric acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"4-aminobutanoate metabolic process","type":"exact"},{"name":"4-aminobutanoate metabolism","type":"exact"},{"name":"4-aminobutyrate metabolic process","type":"exact"},{"name":"4-aminobutyrate metabolism","type":"exact"},{"name":"GABA metabolic process","type":"exact"},{"name":"GABA metabolism","type":"exact"},{"name":"gamma-aminobutyric acid metabolism","type":"exact"}],"termid":"GO:0009448","terms_by_termid":{"GO:0009448":null,"GO:0009450":null}}


id: PBO:0053903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1193","termid":"PBO:0053903"}


id: MONDO:0016998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete complex chromosomal rearrangement (obsolete MONDO:0016998)","secondary_identifiers":["Orphanet:263708"],"termid":"MONDO:0016998","xrefs":{"Monarch":{"xref_id":"0016998"}}}


id: GO:0035527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NADP+ = 3-oxopropanoate + H+ + NADPH.","definition_xrefs":["RHEA:26438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R09289","MetaCyc:RXN-8974","EC:1.1.1.298"],"synonyms":[{"name":"3-hydroxypropanoate dehydrogenase (NADP+) activity","type":"exact"},{"name":"3-hydroxypropanoate:NADP+ oxidoreductase","type":"related"},{"name":"3-hydroxypropionate:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0035527"}


id: MONDO:1010873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease characterised by impaired unesterified cholesterol and sphingomyelin transport and metabolism, resulting in the accumulation of un-esterified cholesterol and glycosphingolipids within late endosomes and lysosomes that occurs in dogs. Affected animals present with hepatosplenomegaly, neurological degeneration and premature death.","definition_xrefs":["OMIA:000725-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease, type C, dog","synonyms":[{"name":"Niemann-Pick disease, type C1, dog","type":"related"}],"termid":"MONDO:1010873","xrefs":{"Monarch":{"xref_id":"1010873"}}}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["GOC:bf","GOC:sp","VZ:846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: GO:0072469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about cell size is received and converted into a molecular signal, contributing to a cell size control checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell size control checkpoint (obsolete GO:0072469)","synonyms":[{"name":"cell size control checkpoint sensor mechanism","type":"related"},{"name":"cell size control checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in mitotic cell cycle cell size control checkpoint","type":"exact"},{"name":"sensing involved in cell size control checkpoint","type":"related"}],"termid":"GO:0072469"}


id: GO:0018358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin via S-phytochromobilin-L-cysteine.","definition_xrefs":["RESID:AA0133"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phytochromobilin linkage via S-phytochromobilin-L-cysteine (obsolete GO:0018358)","termid":"GO:0018358"}


id: GO:0030032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium organization","termid":"GO:0097581"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"lamellipodium assembly","synonyms":[{"name":"lamellipodium biogenesis","type":"related"},{"name":"lamellipodium biosynthesis","type":"exact"},{"name":"lamellipodium formation","type":"exact"}],"termid":"GO:0030032"}


id: MOD:00590
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15549660","Unimod:270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:00590"}


id: PBO:0078707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-2","termid":"PBO:0078707"}


id: PBO:0109965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX7 divergent transcript","termid":"PBO:0109965"}


id: GO:0010565
data:
  {"annotated_genes":["SJAG_01402","SJAG_01672","SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[88653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[76921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_01672":null,"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ketone metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010565","terms_by_termid":{"GO:0010510":null,"GO:0045717":null,"GO:1904775":null}}


id: PBO:0038350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_allergic_trigger_for","termid":"PBO:0038350"}


id: MONDO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin A due to malnutrition, malabsorption, or dietary lack. It is manifested with reduced night vision, night blindness, and xerophthalmia.","definition_xrefs":["NCIT:C85220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin A deficiency","secondary_identifiers":["MEDGEN:22668","MedDRA:10047586","icd11.foundation:435342452","ICD9:264","SCTID:72000004","UMLS:C0042842","ICD9:264.9","MESH:D014802","EFO:1001237","ICD9:264.8","HP:0004905"],"synonyms":[{"name":"deficiencies, vitamin A","type":"related"},{"name":"deficiency, vitamin A","type":"related"},{"name":"vitamin A deficiencies","type":"related"},{"name":"vitamin A deficiency","type":"exact"},{"name":"vitamin A deficiency (disease)","type":"exact"}],"termid":"MONDO:0007016","xrefs":{"Monarch":{"xref_id":"0007016"}}}


id: PBO:0044682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4 antisense RNA 1","termid":"PBO:0044682"}


id: GO:0000297
data:
  {"annotated_genes":["SJAG_02344","SJAG_02059","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81496,110515,116960],"is_not":false,"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of spermine from one side of a membrane to the other. Spermine is a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"spermine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000297","terms_by_termid":{"GO:0000297":null}}


id: GO:1905371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide phosphoethanolamine.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:25667419","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ceramide phosphoethanolamine metabolic process","synonyms":[{"name":"ceramide phosphoethanolamine metabolism","type":"exact"}],"termid":"GO:1905371"}


id: MOD:00545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00927. Remap to MOD:00927.","definition_xrefs":["PubMed:14670044"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00545 deuterated dimethyl labeling (D) (obsolete MOD:00545)","termid":"MOD:00545"}


id: GO:0030105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Extreme immunological sensitivity of the body or tissues to the reintroduction of an antigen. It is a form of anamnestic reaction and is accompanied by pathological changes in tissues or organs due to the release of pharmacologically active substances.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete anaphylaxis (obsolete GO:0030105)","synonyms":[{"name":"anaphylaxis","type":"exact"}],"termid":"GO:0030105"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: FYPO:0000088
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118831],"is_not":false,"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[118829,118830,118835,118836,118837],"is_not":false,"summary":null,"term":"FYPO:0000088"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydroxyurea. Cells stop growing (and may die) at a concentration of hydroxyurea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01205":null,"SJAG_01680":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":6,"genotypes_by_uniquename":{"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"sensitive to hydroxyurea","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_04671","SJAG_01680","SJAG_01205","SJAG_04287","SJAG_00364"],"single_locus_genotype_uniquenames":["chk1delta","rad3delta","cds1delta","crb2delta","mrc1delta"],"synonyms":[{"name":"hypersensitive to hydroxyurea","type":"exact"},{"name":"sensitive to HU","type":"exact"},{"name":"sensitive to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0000088","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000088":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1905671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysosome organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25561470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lysosome organization","synonyms":[{"name":"regulation of lysosome organisation","type":"exact"},{"name":"regulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905671"}


id: PBO:0053384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 311","termid":"PBO:0053384"}


id: MONDO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the laryngeal airway.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngostenosis","secondary_identifiers":["MESH:D007829","DOID:11527","ICD10CM:J38.6","HP:0001602","UMLS:C0023075","ICD9:478.74","MEDGEN:7274","SCTID:75547007"],"synonyms":[{"name":"stenosis of larynx","type":"exact"}],"termid":"MONDO:0001305","xrefs":{"Monarch":{"xref_id":"0001305"}}}


id: PBO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 3","termid":"PBO:0051637"}


id: PBO:0068106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 413","termid":"PBO:0068106"}


id: GO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048942"}


id: GO:0060334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of response to type II interferon","termid":"GO:0060330"},{"relation_name":"regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877312"],"synonyms":[{"name":"regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"regulation of immune interferon signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060334"}


id: PBO:0035936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035936"}


id: MONDO:0859518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 26, with chondrodysplasia","secondary_identifiers":["UMLS:C5830312","DOID:0070403","OMIM:620269","MEDGEN:1840948"],"termid":"MONDO:0859518","xrefs":{"Monarch":{"xref_id":"0859518"}}}


id: FYPO:0000148
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118790,119105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic cell cycle","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"termid":"FYPO:0000148","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0046575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 17","termid":"PBO:0046575"}


id: GO:1902584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to water deprivation.","definition_xrefs":["PMID:24198318","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"positively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to water deprivation","synonyms":[{"name":"activation of drought tolerance","type":"related"},{"name":"activation of response to dehydration","type":"narrow"},{"name":"activation of response to drought","type":"narrow"},{"name":"activation of response to thirst","type":"narrow"},{"name":"activation of response to water deprivation","type":"narrow"},{"name":"positive regulation of drought tolerance","type":"related"},{"name":"positive regulation of response to dehydration","type":"exact"},{"name":"positive regulation of response to drought","type":"exact"},{"name":"positive regulation of response to thirst","type":"exact"},{"name":"up regulation of drought tolerance","type":"related"},{"name":"up regulation of response to dehydration","type":"exact"},{"name":"up regulation of response to drought","type":"exact"},{"name":"up regulation of response to thirst","type":"exact"},{"name":"up regulation of response to water deprivation","type":"exact"},{"name":"up-regulation of drought tolerance","type":"related"},{"name":"up-regulation of response to dehydration","type":"exact"},{"name":"up-regulation of response to drought","type":"exact"},{"name":"up-regulation of response to thirst","type":"exact"},{"name":"up-regulation of response to water deprivation","type":"exact"},{"name":"upregulation of drought tolerance","type":"related"},{"name":"upregulation of response to dehydration","type":"exact"},{"name":"upregulation of response to drought","type":"exact"},{"name":"upregulation of response to thirst","type":"exact"},{"name":"upregulation of response to water deprivation","type":"exact"}],"termid":"GO:1902584"}


id: FYPO:0006597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell wall organization RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell wall organization RNAs are transcribed from genes whose products are involved in assembly, alteration, or disassembly of the cell wall.","definition_xrefs":["PMID:29878109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of cell wall organization gene mRNA during vegetative growth","synonyms":[{"name":"increased cell wall organization gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell wall organization gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell wall organization gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell wall organization gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell wall remodeling gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006597"}


id: GO:1900458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["PMID:21855796","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"down regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"downregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"downregulation of brassinosteroid mediated signalling","type":"exact"},{"name":"inhibition of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"inhibition of brassinosteroid mediated signalling","type":"exact"},{"name":"negative regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900458"}


id: GO:0032046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded flattened sac that is formed during micropexophagy between the membrane tips of an engulfing vacuole, completing the engulfment and sequestration of peroxisomes from the cytosol, and forming a micropexophagic body within the lumen of the vacuole.","definition_xrefs":["PMID:15563611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"micropexophagy-specific membrane apparatus","synonyms":[{"name":"MIPA","type":"exact"},{"name":"micropexophagic apparatus","type":"exact"}],"termid":"GO:0032046"}


id: GO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaM subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alphaM-beta2 complex","synonyms":[{"name":"Itgam-Itgb2 complex","type":"narrow"},{"name":"alphaM-beta2 integrin complex","type":"exact"}],"termid":"GO:0034688"}


id: PBO:0029352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding","termid":"PBO:0029352"}


id: PBO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_kinetochore_microtubule_depolymerization_during_mitotic_metaphase_chromosome_recapture","termid":"PBO:0033789"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: GO:0007185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses protein tyrosine phosphatase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor protein tyrosine phosphatase signaling pathway","synonyms":[{"name":"transmembrane receptor protein tyrosine phosphatase signaling pathway","type":"exact"},{"name":"transmembrane receptor protein tyrosine phosphatase signalling pathway","type":"exact"}],"termid":"GO:0007185"}


id: PATO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's magnitude in respect to a related entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proportionality to","synonyms":[{"name":"proportion","type":"exact"},{"name":"proportionality","type":"exact"},{"name":"quotient","type":"exact"},{"name":"rate","type":"related"},{"name":"ratio","type":"exact"}],"termid":"PATO:0001470"}


id: PBO:0017421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contained_in","termid":"PBO:0017421"}


id: GO:0043627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estrogen","synonyms":[{"name":"response to 17alpha-ethynylestradiol","type":"related"},{"name":"response to estrogen stimulus","type":"exact"},{"name":"response to oestrogen stimulus","type":"exact"}],"termid":"GO:0043627"}


id: GO:0042027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidylproline (omega=180) = peptidylproline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclophilin-type peptidyl-prolyl cis-trans isomerase activity (obsolete GO:0042027)","synonyms":[{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"exact"}],"termid":"GO:0042027"}


id: PR:Q10172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup214 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein pan1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.09c","secondary_identifiers":["UniProtKB:Q10172"],"synonyms":[{"name":"SPAC25G10.09c","type":"related"},{"name":"Spom972h-NUP214","type":"exact"}],"termid":"PR:Q10172"}


id: GO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon metabolic process","synonyms":[{"name":"halogenated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042197"}


id: GO:0039537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway. This is a mechanism by which the virus evades the host innate immune response.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway","termid":"GO:0052078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"suppression by virus of host RIG-I-like receptor (RLR) signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I/MDA5 signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-like helicase signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-like receptor signaling pathway","type":"related"},{"name":"suppression by virus of host RLR signaling pathway","type":"related"},{"name":"suppression by virus of host cytoplasmic pattern recognition receptor signaling pathway in response to virus","type":"exact"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0039537"}


id: PBO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated like 2","termid":"PBO:0060700"}


id: PBO:0027730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027730"}


id: PBO:0081465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 335","termid":"PBO:0081465"}


id: MONDO:0019946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ligneous conjunctivitis (obsolete MONDO:0019946)","termid":"MONDO:0019946","xrefs":{"Monarch":{"xref_id":"0019946"}}}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: PBO:0077247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and death domain 1","termid":"PBO:0077247"}


id: PBO:0052787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 26","termid":"PBO:0052787"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:11063967","PMID:14976517","PMID:9884123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: GO:0052672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,6E,10E)-geranylgeraniol + CTP = (2E,6E,10E)-geranylgeranyl phosphate + CDP + H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP:geranylgeraniol kinase activity (obsolete GO:0052672)","synonyms":[{"name":"CTP:geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052672"}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: MONDO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of papillary carcinoma of the thyroid gland characterized by the presence of pseudostratified malignant follicular cells.","definition_xrefs":["NCIT:C35830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"columnar cell variant thyroid gland papillary carcinoma","secondary_identifiers":["DOID:7088","ICDO:8344/3","UMLS:C1333120","MEDGEN:272499"],"synonyms":[{"name":"columnar cell variant papillary carcinoma","type":"exact"},{"name":"columnar cell variant papillary thyroid gland carcinoma","type":"exact"},{"name":"columnar cell variant thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004102","xrefs":{"Monarch":{"xref_id":"0004102"}}}


id: FYPO:0003355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize sulfur-containing amino acids, and therefore requires one or more sulfur-containing amino acids (e.g. cysteine or methionine) in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for sulfur-containing amino acid","synonyms":[{"name":"growth auxotrophic for sulfur-containing amino acid during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for sulfur-containing amino acid during vegetative growth","type":"exact"},{"name":"growth auxotrophic for sulphur-containing amino acid","type":"exact"},{"name":"sulfur-containing amino acid auxotrophy","type":"exact"}],"termid":"FYPO:0003355"}


id: PBO:0087843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonyl-tRNA synthetase; essential cytoplasmic protein; human homolog TARS can complement yeast null mutant","termid":"PBO:0087843"}


id: PBO:0053492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 470","termid":"PBO:0053492"}


id: PBO:0083222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C","termid":"PBO:0083222"}


id: GO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein metabolic process","synonyms":[{"name":"APP metabolic process","type":"exact"},{"name":"APP metabolism","type":"exact"},{"name":"amyloid precursor protein metabolism","type":"exact"}],"termid":"GO:0042982"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PBO:0074985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-27","termid":"PBO:0074985"}


id: PBO:0038453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase","termid":"PBO:0038453"}


id: GO:2001066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amylopectin binding","termid":"GO:2001066"}


id: MONDO:0015459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the nasopharyngeal epithelium. It includes the following types: keratinizing squamous cell carcinoma, nonkeratinizing carcinoma (differentiated and undifferentiated), basaloid squamous cell carcinoma, and papillary adenocarcinoma.","definition_xrefs":["NCIT:C3871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated carcinoma","termid":"MONDO:0017344"},{"relation_name":"is_a","term_name":"malignant tumor of nasopharynx","termid":"MONDO:0021315"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"nasopharyngeal carcinoma","secondary_identifiers":["GARD:7163","UMLS:C2931822","ICD9:147.2","DOID:9261","ICD9:147.0","ICD9:147","Orphanet:150","MESH:D00007727","SCTID:363398003","ICD9:147.1","MEDGEN:419909","MESH:C538339","MedDRA:10028793","ICD9:147.3","ICD9:147.9","icd11.foundation:1883313543","MESH:D000077274","ONCOTREE:NPC"],"synonyms":[{"name":"NPC","type":"exact"},{"name":"cancer of nasopharynx","type":"broad"},{"name":"cancer of the nasopharynx","type":"broad"},{"name":"carcinoma of nasopharynx","type":"exact"},{"name":"carcinoma of the nasopharynx","type":"exact"},{"name":"malignant nasopharyngeal tumor","type":"broad"},{"name":"malignant nasopharyngeal tumour","type":"broad"},{"name":"malignant neoplasm of anterior wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of lateral wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of nasopharyngeal wall","type":"broad"},{"name":"malignant neoplasm of nasopharynx","type":"broad"},{"name":"malignant neoplasm of nasopharynx (disorder) [ambiguous]","type":"broad"},{"name":"malignant neoplasm of other specified sites of nasopharynx","type":"broad"},{"name":"malignant neoplasm of posterior wall of nasopharynx","type":"broad"},{"name":"malignant neoplasm of roof of nasopharynx","type":"broad"},{"name":"malignant neoplasm of superior wall of nasopharynx","type":"broad"},{"name":"malignant tumor of anterior wall of nasopharynx","type":"broad"},{"name":"malignant tumor of lateral wall of nasopharynx","type":"broad"},{"name":"malignant tumor of posterior wall of nasopharynx","type":"broad"},{"name":"malignant tumour of anterior wall of nasopharynx","type":"broad"},{"name":"malignant tumour of lateral wall of nasopharynx","type":"broad"},{"name":"malignant tumour of posterior wall of nasopharynx","type":"broad"},{"name":"nasopharyngeal cancer","type":"broad"},{"name":"nasopharyngeal carcinoma","type":"exact"},{"name":"nasopharyngeal throat cancer","type":"broad"},{"name":"nasopharynx carcinoma","type":"exact"},{"name":"primary malignant neoplasm of anterior wall of nasopharynx","type":"broad"},{"name":"squamous cell carcinoma of the nasopharynx","type":"exact"}],"termid":"MONDO:0015459","xrefs":{"Monarch":{"xref_id":"0015459"}}}


id: MONDO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the male breast.","direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"male breast carcinoma","secondary_identifiers":["NCIT:C3862","UMLS:C0238033","EFO:0006861","MESH:D018567","MEDGEN:68650","DOID:1614","SCTID:372095001","ICD9:175.9"],"synonyms":[{"name":"Male breast cancer","type":"exact"},{"name":"Male breast carcinoma","type":"exact"},{"name":"breast cancer in men","type":"related"},{"name":"breast cancer, male","type":"related"},{"name":"carcinoma of Male breast","type":"exact"},{"name":"carcinoma of male breast","type":"exact"},{"name":"carcinoma of the Male breast","type":"exact"},{"name":"male breast cancer","type":"exact"},{"name":"male breast carcinoma","type":"exact"},{"name":"malignant neoplasm of male breast","type":"exact"},{"name":"neoplasm of male breast","type":"exact"}],"termid":"MONDO:0005628","xrefs":{"Monarch":{"xref_id":"0005628"}}}


id: PBO:0047026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 91 member A1","termid":"PBO:0047026"}


id: PBO:0045381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 2","termid":"PBO:0045381"}


id: MOD:01084
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reaction of iodoacetic acid effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a carboxymethyl group.","definition_xrefs":["Unimod:6#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid derivatized amino-terminal residue","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl (on Cysteine)","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01084"}


id: GO:0046651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a lymphocyte population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"},{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte proliferation","termid":"GO:0046651"}


id: GO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.","definition_xrefs":["ISBN:0198506732","PMID:15337120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ether lipid metabolic process","secondary_identifiers":["Wikipedia:Ether_lipid"],"synonyms":[{"name":"ether lipid metabolism","type":"exact"},{"name":"plasmalogen metabolic process","type":"narrow"}],"termid":"GO:0046485"}


id: SO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UST located in the 3'UTR of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UST","termid":"SO:0001464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UST","synonyms":[{"name":"3' UST","type":"related"}],"termid":"SO:0001465"}


id: RO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity and a condition (phenotype or disease) with which it exhibits a statistical dependence relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlated_with_condition","termid":"RO:0003308"}


id: GO:0019483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"beta-alanine metabolic process","termid":"GO:0019482"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"beta-alanine biosynthetic process","synonyms":[{"name":"beta-alanine anabolism","type":"exact"},{"name":"beta-alanine biosynthesis","type":"exact"},{"name":"beta-alanine formation","type":"exact"},{"name":"beta-alanine synthesis","type":"exact"}],"termid":"GO:0019483"}


id: PBO:0043825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase 1","termid":"PBO:0043825"}


id: PBO:0068634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 14, pseudogene","termid":"PBO:0068634"}


id: GO:1900069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:16278455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900069"}


id: PBO:0082444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A","termid":"PBO:0082444"}


id: FYPO:0002542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide (obsolete FYPO:0002542)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to H2O2","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002542"}


id: PBO:0067623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 795, pseudogene","termid":"PBO:0067623"}


id: PBO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 39, pseudogene","termid":"PBO:0070082"}


id: PBO:0002848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial FUN14 family protein","termid":"PBO:0002848"}


id: PBO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035791"}


id: PBO:0055467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2900","termid":"PBO:0055467"}


id: MONDO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caffey disease is an osteosclerotic dysplasia characterized by acute inflammation with massive subperiosteal new bone formation usually involving the diaphyses of the long bones, as well as the ribs, mandible, scapulae, and clavicles. The disease is associated with fever, irritability pain and soft tissue swelling, with onset around the age of 2 months and resolving spontaneously by the age of 2 years. However, prenatal disease onset has also been described.","definition_xrefs":["Orphanet:1310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Caffey disease","secondary_identifiers":["ICD9:756.59","GARD:1051","DOID:4257","MEDGEN:43781","OMIM:114000","UMLS:C0020497","NCIT:C118423","MESH:D006958","SCTID:24752008"],"synonyms":[{"name":"Caffey disease","type":"exact"},{"name":"cortical congenital hyperostosis","type":"exact"},{"name":"infantile cortical hyperostosis","type":"exact"}],"termid":"MONDO:0007244","xrefs":{"Monarch":{"xref_id":"0007244"}}}


id: GO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, NAD, NADP, oxygen or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, other acceptors (obsolete GO:0016902)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016902"}


id: PBO:0045531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene","termid":"PBO:0045531"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: PATO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of the thermal energy of a system.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature","termid":"PATO:0000146"}


id: MONDO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia in which the blasts lack sufficient evidence to classify as myeloid or lymphoid or they have morphologic and/or immunophenotypic characteristics of both myeloid and lymphoid cells. (WHO, 2001)","definition_xrefs":["NCIT:C7464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute leukemia of ambiguous lineage","secondary_identifiers":["icd11.foundation:1062906118","NANDO:2200018","SCTID:721308005","MEDGEN:226983","UMLS:C1301357","MedDRA:10067399","Orphanet:86851","GARD:8638","NANDO:2200017"],"synonyms":[{"name":"ALL with myeloid markers","type":"related"},{"name":"AML with lymphoid markers","type":"related"},{"name":"BAL","type":"related"},{"name":"acute leukaemia of indeterminate lineage","type":"exact"},{"name":"acute leukaemia of undetermined lineage","type":"related"},{"name":"acute leukemia of ambiguous lineage","type":"exact"},{"name":"acute leukemia of indeterminate lineage","type":"exact"},{"name":"acute leukemia of undetermined lineage","type":"related"},{"name":"biphenotypic acute leukaemia","type":"related"},{"name":"biphenotypic acute leukemia","type":"related"},{"name":"hybrid acute leukaemia","type":"exact"},{"name":"hybrid acute leukemia","type":"exact"},{"name":"mixed lineage acute leukaemia","type":"exact"},{"name":"mixed lineage acute leukemia","type":"exact"},{"name":"mixed phenotype acute leukaemia","type":"related"},{"name":"mixed phenotype acute leukemia","type":"related"}],"termid":"MONDO:0019460","xrefs":{"Monarch":{"xref_id":"0019460"}}}


id: FYECO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which magnesium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MgCl2","synonyms":[{"name":"magnesium chloride added","type":"exact"}],"termid":"FYECO:0000214"}


id: MONDO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the retroperitoneal space.","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"retroperitoneal cancer","termid":"MONDO:0005941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneum carcinoma","secondary_identifiers":["NCIT:C7352","UMLS:C0948749","DOID:12342","MEDGEN:215301"],"synonyms":[{"name":"carcinoma of retroperitoneal space","type":"exact"},{"name":"carcinoma of retroperitoneum","type":"exact"},{"name":"carcinoma of the retroperitoneum","type":"exact"},{"name":"retroperitoneal cancer","type":"broad"},{"name":"retroperitoneal carcinoma","type":"exact"},{"name":"retroperitoneal space carcinoma","type":"exact"}],"termid":"MONDO:0001502","xrefs":{"Monarch":{"xref_id":"0001502"}}}


id: SO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Watson strand is the strand whose 5'-end is on the short arm of the chromosome. Of note, the term 'plus strand' is typically based on a reference sequence where it's preferred for the plus strand to be the Watson strand, but might not be and 'plus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Watson_strand","synonyms":[{"name":"Forward strand","type":"exact"},{"name":"Plus strand","type":"broad"},{"name":"Top strand","type":"exact"},{"name":"Watson strand","type":"exact"}],"termid":"SO:0002262"}


id: MONDO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the small intestine. Representative examples include leiomyosarcoma, angiosarcoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:C5335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestinal sarcoma","secondary_identifiers":["UMLS:C1336007","MEDGEN:233455","DOID:5272"],"synonyms":[{"name":"sarcoma of small bowel","type":"exact"},{"name":"sarcoma of small intestine","type":"exact"},{"name":"sarcoma of the small bowel","type":"exact"},{"name":"sarcoma of the small intestine","type":"exact"},{"name":"sarcoma, small intestinal","type":"exact"},{"name":"small bowel sarcoma","type":"exact"},{"name":"small intestinal sarcoma","type":"exact"},{"name":"small intestine sarcoma","type":"exact"}],"termid":"MONDO:0003361","xrefs":{"Monarch":{"xref_id":"0003361"}}}


id: PBO:0110420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFBRAP1 antisense RNA 1","termid":"PBO:0110420"}


id: PBO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 9","termid":"PBO:0072383"}


id: PBO:0090210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP assembly protein Shq1","termid":"PBO:0090210"}


id: PBO:0053251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX4 antisense RNA 1","termid":"PBO:0053251"}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: MONDO:0007772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2A","secondary_identifiers":["OMIM:145260","GARD:16775","icd11.foundation:646091849","Orphanet:88938","SCTID:703254001","MEDGEN:327088","UMLS:C1840389"],"synonyms":[{"name":"Gordon hyperkalemia-hypertension syndrome","type":"related"},{"name":"PHA2A","type":"exact"},{"name":"hyperpotassemia and hypertension, familial","type":"related"},{"name":"hypertensive hyperkalemia, familial","type":"related"},{"name":"pseudohypoaldosteronism, type IIA","type":"related"}],"termid":"MONDO:0007772","xrefs":{"Monarch":{"xref_id":"0007772"}}}


id: FYPO:0003568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in nucleoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003568"}


id: MONDO:0958330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 113","secondary_identifiers":["UMLS:C5935597","MEDGEN:1859161","OMIM:620772"],"termid":"MONDO:0958330","xrefs":{"Monarch":{"xref_id":"0958330"}}}


id: PBO:0062976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC5 antisense RNA 1","termid":"PBO:0062976"}


id: PBO:0068954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 198, pseudogene","termid":"PBO:0068954"}


id: PBO:0057097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 193a","termid":"PBO:0057097"}


id: GO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a medium-chain fatty acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"medium-chain fatty acid transport","termid":"GO:0001579"}


id: MONDO:0008539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal arthrogryposis type 10 (obsolete MONDO:0008539)","termid":"MONDO:0008539","xrefs":{"Monarch":{"xref_id":"0008539"}}}


id: PBO:0113399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; localizes to cytosol and peroxisomes; similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0113399"}


id: GO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transport","synonyms":[{"name":"regulation of Na+ transport","type":"exact"},{"name":"regulation of sodium transport","type":"exact"}],"termid":"GO:0002028"}


id: PBO:0049778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 11","termid":"PBO:0049778"}


id: GO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete heparan sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0015015)","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan formation, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process, enzymatic modification","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, enzymatic modification","type":"related"}],"termid":"GO:0015015"}


id: PBO:0048112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2","termid":"PBO:0048112"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: PR:O14113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sde2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance protein SDE2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"Spom972h-sde2","type":"exact"},{"name":"silencing defective protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14113"}


id: MONDO:1012921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in domestic cats due to a mutation in the CREB3L1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, domestic cat","termid":"MONDO:1011582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, CREB3L1-related, domestic cat","secondary_identifiers":["OMIA:002533-9685"],"termid":"MONDO:1012921","xrefs":{"Monarch":{"xref_id":"1012921"}}}


id: GO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that forms at the cell cortex in response to pheromone treatment and is required for the polarized growth of haploid yeast cells towards a mating partner during yeast mating. In the yeast Saccharomyces cerevisiae, this complex consists of Cdc24p, Far1p, Ste4p (G-protein beta subunit) and Ste18p (G-protein gamma subunit).","definition_xrefs":["PMID:10087263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cdc24p-Far1p-Gbetagamma complex","synonyms":[{"name":"CDC24-FAR1-BG complex","type":"exact"},{"name":"CDC24-FAR1-Gbetagamma complex","type":"exact"},{"name":"Cdc24p-Far1p-BG complex","type":"exact"}],"termid":"GO:0120171"}


id: GO:0097417
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic, ball-like inclusion resembling a nucleolus and consisting of a convoluted network of electron-opaque strands embedded in a less dense matrix. It measures approximately 0.9 microns and lacks a limiting membrane. Its strands (diameter = 400-600 A) appear to be made of an entanglement of tightly packed filaments and particles approximately 25-50 A thick. Cytochemical studies suggest the presence of nonhistone proteins and some RNA. Usually only one such structure is present in a cell, and it appears to occur in most ganglion cells. Although they can be seen anywhere in the cell body, nematosomes are typically located in the perinuclear cytoplasm, where they are often associated with smooth-surfaced and coated vesicles.","definition_xrefs":["PMID:5458990","NIF_Subcellular:sao138430598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nematosome","termid":"GO:0097417"}


id: PBO:0066418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB15 effector protein","termid":"PBO:0066418"}


id: GO:0090368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jp","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of ornithine metabolic process","termid":"GO:0090368"}


id: MOD:01703
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to dehydrobutyrine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dHAbu","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:01703"}


id: GO:0120290
data:
  {"annotated_genes":["SJAG_05372","SJAG_02079","SJAG_01677","SJAG_01410","SJAG_03843","SJAG_02992","SJAG_02299","SJAG_01572","SJAG_05012","SJAG_01185","SJAG_01076","SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88633,89062,91012,95677,96192,98460,98572,109129,109537,113884,115119,116411],"is_not":false,"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"A cellular localization process where a DNA replication fork that has stalled is signaled to relocate and anchor to the nuclear periphery for the time necessary to complete recombination-dependent replication.","definition_xrefs":["GOC:krc","GOC:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"part_of","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02299":null,"SJAG_02992":null,"SJAG_03843":null,"SJAG_05012":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0051179","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"stalled replication fork localization to nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stalled replication fork localization to nuclear periphery involved in replication fork processing","type":"exact"}],"termid":"GO:0120290","terms_by_termid":{"GO:0120290":null}}


id: GO:1902116
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"negatively_regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of organelle assembly","type":"exact"},{"name":"down-regulation of organelle assembly","type":"exact"},{"name":"downregulation of organelle assembly","type":"exact"},{"name":"inhibition of organelle assembly","type":"narrow"}],"termid":"GO:1902116","terms_by_termid":{"GO:1905560":null}}


id: MONDO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 3-Methylcrotonyl-CoA carboxylase deficiency (obsolete MONDO:0000419)","termid":"MONDO:0000419","xrefs":{"Monarch":{"xref_id":"0000419"}}}


id: MOD:01783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N-dimethyl-L-serine.","definition_xrefs":["RESID:AA0534","PubMed:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-serine","synonyms":[{"name":"(2S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylserine","type":"exact"},{"name":"N,N-dimethyl-L-serine","type":"exact"},{"name":"N,N-dimethylserine","type":"exact"}],"termid":"MOD:01783"}


id: GO:0052880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces a copper protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor","secondary_identifiers":["EC:1.10.9.-"],"termid":"GO:0052880"}


id: MONDO:0018902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.","definition_xrefs":["NCIT:C3758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatocellular adenoma","secondary_identifiers":["GARD:18847","ONCOTREE:LIAD","UMLS:C0206669","Orphanet:54272","MEDGEN:61655","DOID:0050868","icd11.foundation:1481070735","ICDO:8170/0","EFO:0000762","MedDRA:10019827","MESH:D018248"],"synonyms":[{"name":"HCA","type":"exact"},{"name":"LIAD","type":"related"},{"name":"adenoma of liver cells","type":"exact"},{"name":"adenoma of the liver cells","type":"exact"},{"name":"adenoma, hepatocellular, benign","type":"exact"},{"name":"hepatocellular adenoma","type":"exact"},{"name":"liver cell adenoma","type":"exact"}],"termid":"MONDO:0018902","xrefs":{"Monarch":{"xref_id":"0018902"}}}


id: PBO:0066188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11","termid":"PBO:0066188"}


id: PBO:0090896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spg1-binding protein Etd1","termid":"PBO:0090896"}


id: PBO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 34","termid":"PBO:0071896"}


id: PBO:0066817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 116","termid":"PBO:0066817"}


id: PBO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase (predicted)","termid":"PBO:0001909"}


id: PR:O94729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tti2 gene.","definition_xrefs":["UniProtKB:O94729","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.17c","synonyms":[{"name":"Spom972h-tti2","type":"exact"}],"termid":"PR:O94729"}


id: PBO:0005538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein coupled receptor Git3","termid":"PBO:0005538"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.70","RHEA:19309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.70-RXN","KEGG_REACTION:R05790"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: PBO:0059424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRS2 pseudogene 1","termid":"PBO:0059424"}


id: PBO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOG neighbor homeobox","termid":"PBO:0060475"}


id: MONDO:1012320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"high-frequency tremor, non-human animal","termid":"MONDO:1011796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-frequency tremor, pig","secondary_identifiers":["OMIA:001200-9823"],"termid":"MONDO:1012320","xrefs":{"Monarch":{"xref_id":"1012320"}}}


id: GO:1903605
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107035,93921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cytochrome.","definition_xrefs":["GO_REF:0000068","PMID:19721088","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome anabolism","type":"exact"},{"name":"cytochrome biosynthesis","type":"exact"},{"name":"cytochrome formation","type":"exact"},{"name":"cytochrome synthesis","type":"exact"}],"termid":"GO:1903605","terms_by_termid":{"GO:1903607":null}}


id: PBO:0025490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0025490"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: PBO:0082642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of mRNP complexes associated with polyribosomes; involved in localization of mRNAs to P bodies; implicated in secretion and nuclear segregation; multicopy suppressor of BFA (Brefeldin A) sensitivity","termid":"PBO:0082642"}


id: PBO:0054265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1650","termid":"PBO:0054265"}


id: SO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in an apicoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"apicoplast_sequence","termid":"SO:0000743"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_chromosome","synonyms":[{"name":"apicoplast chromosome","type":"exact"}],"termid":"SO:0001259"}


id: PBO:0075736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 4","termid":"PBO:0075736"}


id: PR:O94721
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RWD domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04459","PANTHER:PTHR12292:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain-containing protein C1393.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.09c","secondary_identifiers":["UniProtKB:O94721"],"synonyms":[{"name":"Spom972h-RWDD1","type":"exact"}],"termid":"PR:O94721"}


