# terms

id: GO:0017110
data:
  {"annotated_genes":["SJAG_03362","SJAG_03676","SJAG_01595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044715"},{"annotations":[113555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043262"},{"annotations":[113559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036384"},{"annotations":[72266,78220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004382"},{"annotations":[72271,78224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045134"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate + phosphate.","definition_xrefs":["EC:3.6.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03362":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"nucleoside diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8851550","Reactome:R-HSA-8851225","Reactome:R-HSA-8851129","Reactome:R-HSA-8850854","MetaCyc:NUCLEOSIDE-DIPHOSPHATASE-RXN","Reactome:R-HSA-8851356","RHEA:36799","Reactome:R-HSA-8851396"],"synonyms":[{"name":"NDPase activity","type":"related"},{"name":"apyrase activity","type":"broad"},{"name":"inosine 5'-diphosphatase","type":"narrow"},{"name":"inosine diphosphatase","type":"narrow"},{"name":"nucleoside 5'-diphosphatase activity","type":"related"},{"name":"nucleoside diphosphatase activity","type":"exact"},{"name":"nucleoside diphosphate phosphohydrolase activity","type":"related"},{"name":"nucleoside-diphosphatase activity","type":"exact"},{"name":"nucleoside-diphosphate phosphohydrolase activity","type":"related"},{"name":"type B nucleoside diphosphatase","type":"narrow"},{"name":"type L nucleoside diphosphatase","type":"narrow"}],"termid":"GO:0017110","terms_by_termid":{"GO:0004382":null,"GO:0036384":null,"GO:0043262":null,"GO:0044715":null,"GO:0045134":null}}


id: FYPO:0008240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular polyphosphate level","termid":"FYPO:0008024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased total cellular polyphosphate level","termid":"FYPO:0008240"}


id: PATO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left handedness","termid":"PATO:0002202"}


id: MONDO:0032663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 70","secondary_identifiers":["DOID:0112206","GARD:16336","MEDGEN:1648407","OMIM:618298","UMLS:C4749023"],"synonyms":[{"name":"DEE70","type":"exact"},{"name":"EIEE70","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 70","type":"exact"},{"name":"developmental and epileptic encephalopathy 70","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 70","type":"exact"}],"termid":"MONDO:0032663","xrefs":{"Monarch":{"xref_id":"0032663"}}}


id: GO:0140951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl27-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me3.","definition_xrefs":["RHEA:60292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"histone H3K27 trimethyltransferase activity","synonyms":[{"name":"histone H3-K27 trimethylase activity","type":"exact"},{"name":"histone H3-K27 trimethylation","type":"broad"},{"name":"histone H3K27 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140951"}


id: PBO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseinolytic mitochondrial matrix peptidase proteolytic subunit","termid":"PBO:0043346"}


id: GO:0180010
data:
  {"annotated_genes":["SJAG_04587","SJAG_01791","SJAG_03594","SJAG_01599","SJAG_00435","SJAG_02668","SJAG_00961","SJAG_03126","SJAG_03233","SJAG_02865","SJAG_03624","SJAG_04022","SJAG_03853","SJAG_02720","SJAG_03500","SJAG_03226","SJAG_01412","SJAG_04942","SJAG_02551","SJAG_00527","SJAG_01175","SJAG_02037"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69215,87088,87843,90088,92298,92409,92917,92938,96687,97643,98599,99818,104242,104281,104535,109390,110881,111154,111543,113164,114895,117839],"is_not":false,"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II mRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3' processing of RNA polymerase II mRNA transcripts","type":"exact"},{"name":"mRNA polyadenylation","type":"related"}],"termid":"GO:0180010","terms_by_termid":{"GO:0180010":null}}


id: PBO:0070925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 33","termid":"PBO:0070925"}


id: MONDO:0024523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any aortic valve disease in which the cause of the disease is a mutation in the NOTCH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial bicuspid aortic valve","termid":"MONDO:0007194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve disease 1","secondary_identifiers":["OMIM:109730","DOID:0080333","GARD:18470","UMLS:C3887892","MEDGEN:854610"],"synonyms":[{"name":"AOVD1","type":"exact"},{"name":"NOTCH1 aortic valve disease","type":"exact"},{"name":"Notch1 aortic valve disease","type":"exact"},{"name":"aortic stenosis, calcific","type":"related"},{"name":"aortic valve disease","type":"related"},{"name":"aortic valve disease 1","type":"exact"},{"name":"aortic valve disease caused by mutation in NOTCH1","type":"exact"},{"name":"aortic valve disease caused by mutation in Notch1","type":"exact"},{"name":"aortic valve, bicuspid","type":"related"},{"name":"aortic valve, calcification of","type":"related"},{"name":"bicuspid aortic valve","type":"related"}],"termid":"MONDO:0024523","xrefs":{"Monarch":{"xref_id":"0024523"}}}


id: SO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the three-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_LTR","synonyms":[{"name":"3' LTR","type":"exact"},{"name":"3' long terminal repeat","type":"exact"},{"name":"three prime LTR","type":"exact"}],"termid":"SO:0000426"}


id: GO:2000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000711"}


id: MONDO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glial tumor of neuroepithelial tissue with unknown origin (obsolete MONDO:0016704)","secondary_identifiers":["Orphanet:251668"],"termid":"MONDO:0016704","xrefs":{"Monarch":{"xref_id":"0016704"}}}


id: PR:O94473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.04 gene.","definition_xrefs":["UniProtKB:O94473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C1919.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.04","synonyms":[{"name":"Spom972h-SPCC1919.04","type":"exact"}],"termid":"PR:O94473"}


id: PBO:0028141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sulfide_absent_from_cell","termid":"PBO:0028141"}


id: GO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"positively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron apoptotic process","synonyms":[{"name":"activation of neuron apoptosis","type":"narrow"},{"name":"positive regulation of neuron apoptosis","type":"narrow"},{"name":"positive regulation of programmed cell death, neurons","type":"exact"},{"name":"stimulation of neuron apoptosis","type":"narrow"},{"name":"up regulation of neuron apoptosis","type":"exact"},{"name":"up-regulation of neuron apoptosis","type":"exact"},{"name":"upregulation of neuron apoptosis","type":"exact"}],"termid":"GO:0043525"}


id: PBO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 2","termid":"PBO:0060694"}


id: MOD:01837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues with a thioether bond to form L-lanthionine.","definition_xrefs":["PubMed:6007887","PubMed:20805503","RESID:AA0110#CYS2","ChEBI:21347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lanthionine (Cys-Cys)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"}],"termid":"MOD:01837"}


id: GO:0035011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a multilayered, melanized sheath of cells around a foreign invader.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanization defense response","termid":"GO:0035006"},{"relation_name":"is_a","term_name":"encapsulation of foreign target","termid":"GO:0035010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}


id: PBO:0064826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 7","termid":"PBO:0064826"}


id: GO:0030406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrix metalloproteinase 25 activity (obsolete GO:0030406)","synonyms":[{"name":"MMP-25","type":"exact"},{"name":"MT6-MMP","type":"exact"},{"name":"matrix metalloproteinase 25 activity","type":"exact"}],"termid":"GO:0030406"}


id: PBO:0066621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066621"}


id: GO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to triglyceride","termid":"GO:0034014"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triglyceride","synonyms":[{"name":"cellular response to triacylglyceride","type":"exact"},{"name":"cellular response to triacylglycerol","type":"exact"}],"termid":"GO:0071401"}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: MONDO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious embryofetopathy","secondary_identifiers":["MEDGEN:1736309","Orphanet:232035","UMLS:C5439342"],"termid":"MONDO:0016511","xrefs":{"Monarch":{"xref_id":"0016511"}}}


id: GO:0140760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri or a dimethyl-lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0032452","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K56me2/H3K56me3 demethylase activity","synonyms":[{"name":"histone H3-tri/dimethyl-lysine-56 demethylase activity","type":"exact"},{"name":"histone H3K56me2 demethylase activity","type":"related"},{"name":"histone H3K56me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K56 specific)","type":"related"}],"termid":"GO:0140760"}


id: PBO:0039268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 1","termid":"PBO:0039268"}


id: MONDO:1010943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, dog","termid":"MONDO:1010948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, dog","secondary_identifiers":["OMIA:001109-9615"],"termid":"MONDO:1010943","xrefs":{"Monarch":{"xref_id":"1010943"}}}


id: GO:0005696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of DNA and protein that seals the end of a chromosome. The telomeric DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA.","definition_xrefs":["PMID:11352055","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere (obsolete GO:0005696)","synonyms":[{"name":"telomere","type":"exact"}],"termid":"GO:0005696"}


id: GO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of alternate transcripts of immunoglobulin genes through alternate splicing of exons.","definition_xrefs":["ISBN:0781735149","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"alternate splicing of immunoglobulin genes","synonyms":[{"name":"alternate splicing of antibody genes","type":"exact"}],"termid":"GO:0002564"}


id: PBO:0113102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; deletion or inactivation of helicase function suppresses chromosome instability (CIN) associated with centromere or kinetochore defects; structurally and functionally related to Pif1p","termid":"PBO:0113102"}


id: PBO:0046953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 76 member A","termid":"PBO:0046953"}


id: RO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has start sequence y if the start of x is identical to the start of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_sequence","termid":"RO:0002516"}


id: PBO:0057657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1249","termid":"PBO:0057657"}


id: PBO:0027629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_in_cell","termid":"PBO:0027629"}


id: PBO:0025442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocystinuria","termid":"PBO:0025442"}


id: PBO:0083203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YFR009W; identified by expression profiling and mass spectrometry","termid":"PBO:0083203"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: PBO:0028097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0028097"}


id: PBO:0085076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear 5' to 3' single-stranded RNA exonuclease; involved in RNA metabolism, including rRNA and snoRNA processing, as well as poly (A+) dependent and independent mRNA transcription termination; required for cotranscriptional pre-rRNA cleavage; displaces Cdk1p from elongating transcripts, especially as RNAPII reaches the poly(A) site, negatively regulates phosphorylation of the CTD of RNAPII, and inhibits RNAPII transcriptional elongation","termid":"PBO:0085076"}


id: MONDO:0033980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA fusion-positive ependymoma","secondary_identifiers":["UMLS:C4289581","GARD:22210","Orphanet:530792","MEDGEN:927113","DOID:0080892","NCIT:C129351"],"termid":"MONDO:0033980","xrefs":{"Monarch":{"xref_id":"0033980"}}}


id: PBO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.52","termid":"PBO:0002883"}


id: SO:1000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant effect, causing an intron to be gained by the processed transcript; usually a result of a donor acceptor mutation (SO:1000072).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000185 sequence_variant_causes_intron_gain (obsolete SO:1000185)","synonyms":[{"name":"mutation causes intron gain","type":"related"},{"name":"sequence variant causes intron gain","type":"exact"}],"termid":"SO:1000185"}


id: PBO:0064663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4F","termid":"PBO:0064663"}


id: PBO:0063831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"putative homeodomain transcription factor 1","termid":"PBO:0063831"}


id: MONDO:0700301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Fischer-Zirnsak progeroid syndrome","secondary_identifiers":["OMIM:621130"],"termid":"MONDO:0700301","xrefs":{"Monarch":{"xref_id":"0700301"}}}


id: FYPO:0000828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature mitotic G1 phase entry","synonyms":[{"name":"accelerated entry into G1","type":"related"},{"name":"advanced mitotic G1 phase entry","type":"exact"},{"name":"advanced mitotic G1 progression","type":"related"},{"name":"mitotic cell cycle advance in G1","type":"related"},{"name":"premature G1 phase entry during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis","type":"exact"},{"name":"premature mitotic G1 phase entry during vegetative growth","type":"exact"}],"termid":"FYPO:0000828"}


id: GO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative.","definition_xrefs":["PMID:10409637","PMID:17039368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"brassinosteroid sulfotransferase activity","termid":"GO:0080118"}


id: PR:O94344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1271.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.11","synonyms":[{"name":"Spom972h-pet802","type":"exact"}],"termid":"PR:O94344"}


id: MONDO:1010076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypereosinophilic syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypereosinophilic syndrome, non-human animal","secondary_identifiers":["OMIA:000502"],"termid":"MONDO:1010076","xrefs":{"Monarch":{"xref_id":"1010076"}}}


id: GO:0042472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear morphogenesis","termid":"GO:0042472"}


id: GO:1902344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltose transport.","definition_xrefs":["GOC:dph","PMID:23770568","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltose transport","termid":"GO:1902343"},{"relation_name":"negatively_regulates","term_name":"maltose transport","termid":"GO:0015768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltose transport","synonyms":[{"name":"down regulation of maltose transport","type":"exact"},{"name":"down-regulation of maltose transport","type":"exact"},{"name":"downregulation of maltose transport","type":"exact"},{"name":"inhibition of maltose transport","type":"narrow"}],"termid":"GO:1902344"}


id: MONDO:0017395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"fixed pigmented erythema","secondary_identifiers":["Orphanet:293812","UMLS:C0221242","MEDGEN:526203","icd11.foundation:20014644","GARD:21170","MedDRA:10048796","SCTID:73692007"],"synonyms":[{"name":"fixed drug eruption","type":"exact"}],"termid":"MONDO:0017395","xrefs":{"Monarch":{"xref_id":"0017395"}}}


id: FYPO:0007002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a normal (i.e. indistinguishable from wild type) extent at the silent mating-type cassette. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:26518661","GO:0005721","GO:0043486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone exchange at silent mating-type cassette","synonyms":[{"name":"normal histone exchange at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone exchange at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal histone exchange at silent mating-type locus","type":"exact"}],"termid":"FYPO:0007002"}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: PBO:0058938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MISP family member 3","termid":"PBO:0058938"}


id: PBO:0004358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zuotin (predicted)","termid":"PBO:0004358"}


id: PBO:0087512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterohexameric prefoldin; prefoldin binds cytosolic chaperonin and transfers target proteins to it; involved in the biogenesis of actin and of alpha- and gamma-tubulin; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087512"}


id: PATO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monstrous","termid":"PATO:0001465"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: PBO:0065337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protogenin","termid":"PBO:0065337"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: FYPO:0001172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 7-methylguanosine cap hypermethylation","synonyms":[{"name":"abnormal 2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"abnormal 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"abnormal 7-methylguanosine cap hypermethylation during vegetative growth","type":"exact"},{"name":"abnormal TMG cap formation","type":"exact"},{"name":"abnormal conversion of m(7)G to m(3)G","type":"exact"},{"name":"abnormal snRNA capping","type":"narrow"},{"name":"abnormal snoRNA capping","type":"narrow"}],"termid":"FYPO:0001172"}


id: PBO:0049634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 37","termid":"PBO:0049634"}


id: MONDO:0017838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sclerosteosis is a very rare serious sclerosing hyperostosis syndrome characterized clinically by variable syndactyly and progressive skeletal overgrowth (particularly of the skull), resulting in distinctive facial features (mandibular overgrowth, frontal bossing, midfacial hypoplasia), cranial nerve entrapment causing facial palsy and deafness, and potentially lethal elevation of intracranial pressure.","definition_xrefs":["Orphanet:3152"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosteosis","secondary_identifiers":["icd11.foundation:371637416","OMIMPS:269500","MEDGEN:120530","GARD:4771","MESH:C537525","NANDO:2201369","ICD9:756.59","UMLS:C0265301","DOID:0060251","NCIT:C131133","SCTID:17568006"],"synonyms":[{"name":"cortical hyperostosis with syndactyly","type":"exact"},{"name":"cortical hyperostosis-syndactyly syndrome","type":"exact"}],"termid":"MONDO:0017838","xrefs":{"Monarch":{"xref_id":"0017838"}}}


id: FYPO:0002329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing pravastatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on pravastatin","synonyms":[{"name":"normal cell population growth in presence of pravastatin","type":"exact"},{"name":"normal cell population growth on pravastatin","type":"exact"},{"name":"normal cellular response to pravastatin","type":"related"},{"name":"normal vegetative cell population growth on pravastatin","type":"exact"}],"termid":"FYPO:0002329"}


id: GO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 4-kinase activity","termid":"GO:0000830"}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: PBO:0116222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family, implicated in thiamine or TPP metabolism","termid":"PBO:0116222"}


id: SO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic rRNA","type":"exact"}],"termid":"SO:0002193"}


id: PBO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_vegetative_cell","termid":"PBO:0031413"}


id: GO:0140846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the transition from the initiation to the elongation phases of transcription by RNA polymerase II.","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140845"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"},{"relation_name":"positively_regulates","term_name":"RNA polymerase II promoter clearance","termid":"GO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140846"}


id: GO:1990694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi medial cisterna membrane (obsolete GO:1990694)","synonyms":[{"name":"intrinsic component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990694"}


id: PBO:0063936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 1","termid":"PBO:0063936"}


id: PBO:0069605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 882, pseudogene","termid":"PBO:0069605"}


id: MONDO:0030843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair cancer syndrome","termid":"MONDO:0031219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"mismatch repair cancer syndrome 4","secondary_identifiers":["MEDGEN:1745382","OMIM:619101","UMLS:C5436817","GARD:18364"],"synonyms":[{"name":"MMRCS4","type":"exact"},{"name":"mismatch repair cancer syndrome 4","type":"exact"}],"termid":"MONDO:0030843","xrefs":{"Monarch":{"xref_id":"0030843"}}}


id: PBO:0076059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STON1-GTF2A1L readthrough","termid":"PBO:0076059"}


id: MONDO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss and redistribution of subcutaneous and/or visceral adipose tissue from specific regions of the body.","definition_xrefs":["NCIT:C131296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"partial lipodystrophy","secondary_identifiers":["MEDGEN:1386287","UMLS:C4316789","DOID:0080299"],"termid":"MONDO:0027767","xrefs":{"Monarch":{"xref_id":"0027767"}}}


id: PBO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim40 (predicted)","termid":"PBO:0000938"}


id: PBO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: SO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_RNA_chromosome","synonyms":[{"name":"linear single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000963"}


id: PBO:0052567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 4","termid":"PBO:0052567"}


id: MONDO:0011053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-sparse hair-brachydactyly syndrome is a very rare condition of unknown etiology consisting of short stature, hypotrichosis, brachydactyly with cone-shaped epiphyses, epilepsy and severe mental delay. After the initial delineation of this syndrome by Nicolaides and Baraitser in 1993, only five more patients were published in the literature up to now.","definition_xrefs":["Orphanet:3051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability-sparse hair-brachydactyly syndrome","secondary_identifiers":["MEDGEN:220983","MESH:C536116","OMIM:601358","UMLS:C1303073","SCTID:401046009","DOID:0081441","GARD:270"],"synonyms":[{"name":"NBs","type":"related"},{"name":"NCBRS","type":"related"},{"name":"NICOLAIDES-Baraitser syndrome","type":"related"},{"name":"Nicolaides-Baraitser syndrome","type":"exact"},{"name":"SMARCA2-related BAFopathy","type":"exact"},{"name":"intellectual disability-sparse hair-brachydactyly syndrome","type":"exact"},{"name":"sparse hair and intellectual disability","type":"related"},{"name":"sparse hair and mental retardation","type":"related"}],"termid":"MONDO:0011053","xrefs":{"Monarch":{"xref_id":"0011053"}}}


id: GO:0102830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 stachyose = verbascose + raffinose.","definition_xrefs":["GOC:pz","PMID:12060258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"verbascose synthase activity","secondary_identifiers":["MetaCyc:RXN-8286"],"termid":"GO:0102830"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: PBO:0073454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFT2 domain containing 3","termid":"PBO:0073454"}


id: PATO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of temperature","termid":"PATO:0001304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant temperature","termid":"PATO:0001314"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: PBO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRT1 and RER2","termid":"PBO:0016545"}


id: GO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal motor activity (obsolete GO:0003775)","synonyms":[{"name":"axonemal motor activity","type":"exact"}],"termid":"GO:0003775"}


id: GO:0021538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the epithalamus over time from its initial formation until its mature state. The epithalamus is the small dorsomedial area of the thalamus including the habenular nuclei and associated fiber bundles, the pineal body, and the epithelial roof of the third ventricle.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithalamus development","termid":"GO:0021538"}


id: GO:0032256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a dense core granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of secretory granule localization","termid":"GO:0032254"},{"relation_name":"part_of","term_name":"dense core granule localization","termid":"GO:0032253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of dense core granule localization","synonyms":[{"name":"establishment of dense core granule localisation","type":"exact"},{"name":"establishment of dense core vesicle localization","type":"exact"}],"termid":"GO:0032256"}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: PBO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 2","termid":"PBO:0070978"}


id: GO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydrovomilenine + NADP+ = H+ + NADPH + vomilenine.","definition_xrefs":["EC:1.5.1.32","RHEA:16409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vomilenine reductase activity","secondary_identifiers":["KEGG_REACTION:R05878","MetaCyc:1.5.1.32-RXN"],"synonyms":[{"name":"1,2-dihydrovomilenine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050624"}


id: GO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell development","termid":"GO:0060936"}


id: GO:0048608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"reproductive system development","termid":"GO:0061458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive structure development","termid":"GO:0048608"}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: MONDO:0013413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CNGB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"CNGB1-related retinopathy","termid":"MONDO:0800403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 45","secondary_identifiers":["UMLS:C3151066","GARD:15704","ICD10CM:H35.5","MEDGEN:462416","OMIM:613767","DOID:0110402"],"synonyms":[{"name":"CNGB1 retinitis pigmentosa","type":"exact"},{"name":"RP45","type":"exact"},{"name":"retinitis pigmentosa 45","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CNGB1","type":"exact"},{"name":"retinitis pigmentosa type 45","type":"exact"}],"termid":"MONDO:0013413","xrefs":{"Monarch":{"xref_id":"0013413"}}}


id: GO:0031344
data:
  {"annotated_genes":["SJAG_02379","SJAG_01794","SJAG_03453","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110947,92951,90313,89332,87344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection organisation","type":"exact"},{"name":"regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031344","terms_by_termid":{"GO:1902917":null}}


id: PBO:0069537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 807, pseudogene","termid":"PBO:0069537"}


id: GO:1902574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in negative regulation of leucine import.","definition_xrefs":["GOC:TermGenie","PMID:22992726"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by regulation of transcription from RNA polymerase II promoter (obsolete GO:1902574)","termid":"GO:1902574"}


id: GO:0110115
data:
  {"annotated_genes":["SJAG_04280","SJAG_04486","SJAG_01456","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97928,98503,103010,115601],"is_not":false,"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A megadalton-sized complex at the medial cortex organized as an oligomeric core of SAD family protein kinases involved in cell size-dependent localization and phosphorylation of Wee1 during interphase.","definition_xrefs":["PMID:29514920","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"part_of","term_name":"medial cortical node","termid":"GO:0071341"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01456":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Cdr2 medial cortical node complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"interphase cortical node","type":"exact"},{"name":"interphase node","type":"exact"}],"termid":"GO:0110115","terms_by_termid":{"GO:0110115":null}}


id: PBO:0062467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 158 pseudogene","termid":"PBO:0062467"}


id: PBO:0073359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family E member 3","termid":"PBO:0073359"}


id: GO:0141111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of of cGAS/STING signaling pathway.","definition_xrefs":["PMID:37802025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cGAS/STING signaling pathway","termid":"GO:0140896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cGAS/STING signaling pathway","termid":"GO:0141111"}


id: PBO:0087426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the vacuolar-ATPase V0 domain; encodes one of two isoforms, located in vacuolar V-ATPase complexes while STV1 encodes the second isoform and is located in Golgi and endosomal V-ATPase complexes; interaction with PI(3,5)P2 increases V-ATPase activity and contributes to hyperosmotic stress tolerance; relative distribution to the vacuolar membrane decreases upon DNA replication stress; human homolog ATP6V0A4 implicated in renal tubular acidosis, can complement yeast null mutant","termid":"PBO:0087426"}


id: PBO:0054511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1911","termid":"PBO:0054511"}


id: PBO:0082903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallo-di-peptidase; forms a complex with Dug2p and Dug3p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p); human homolog CNDP2 can complement yeast dug1 mutant","termid":"PBO:0082903"}


id: PBO:0077065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1 pseudogene 1","termid":"PBO:0077065"}


id: GO:0006711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"estrogen catabolic process","synonyms":[{"name":"estrogen breakdown","type":"exact"},{"name":"estrogen catabolism","type":"exact"},{"name":"estrogen degradation","type":"exact"},{"name":"oestrogen catabolic process","type":"exact"},{"name":"oestrogen catabolism","type":"exact"}],"termid":"GO:0006711"}


id: PBO:0064073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 107","termid":"PBO:0064073"}


id: PR:P87216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.06","synonyms":[{"name":"Spom972h-vip1","type":"exact"}],"termid":"PR:P87216"}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: PBO:0067545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 691, pseudogene","termid":"PBO:0067545"}


id: MONDO:1010463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve stenosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve stenosis, non-human animal","termid":"MONDO:1010016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve stenosis, domestic cat","secondary_identifiers":["OMIA:000655-9685"],"termid":"MONDO:1010463","xrefs":{"Monarch":{"xref_id":"1010463"}}}


id: GO:1901709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-larreatricin.","definition_xrefs":["PMID:12960376","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-larreatricin metabolic process","synonyms":[{"name":"(+)-larreatricin metabolism","type":"exact"}],"termid":"GO:1901709"}


id: PBO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 6","termid":"PBO:0046257"}


id: PBO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Cia1","termid":"PBO:0090109"}


id: GO:0031961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear cortisol receptor.","definition_xrefs":["GOC:mah","PMID:12511169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear glucocorticoid receptor binding","termid":"GO:0035259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nuclear cortisol receptor binding","synonyms":[{"name":"cortisol receptor binding","type":"broad"}],"termid":"GO:0031961"}


id: GO:1903936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18674524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium arsenite","termid":"GO:1903935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium arsenite","termid":"GO:1903936"}


id: PBO:0091206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu","termid":"PBO:0091206"}


id: GO:1905092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diosgenin stimulus.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000071","PMID:25765596","GOC:BHF_miRNA","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to triterpenoid","termid":"GO:1905836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diosgenin","termid":"GO:1905092"}


id: MONDO:0010643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clonal (malignant) hematopoietic disorder with an acute onset, affecting the bone marrow and the peripheral blood. The malignant cells show minimal differentiation and are called blasts, either myeloid blasts (myeloblasts) or lymphoid blasts (lymphoblasts).","definition_xrefs":["NCIT:C9300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute leukemia","secondary_identifiers":["ICD9:208.0","ICDO:9801/3","MEDGEN:43225","UMLS:C0085669","SCTID:91855006","DOID:12603","ICD9:208.00","EFO:1000068","MESH:C564112","HP:0002488","NCIT:C9298"],"synonyms":[{"name":"acute leukaemia (disease)","type":"exact"},{"name":"acute leukemia","type":"exact"},{"name":"acute leukemia (disease)","type":"exact"},{"name":"leukemia, acute, X-linked","type":"related"},{"name":"stem cell leukaemia","type":"related"},{"name":"stem cell leukaemia (disease)","type":"related"},{"name":"stem cell leukemia","type":"related"},{"name":"stem cell leukemia (disease)","type":"related"}],"termid":"MONDO:0010643","xrefs":{"Monarch":{"xref_id":"0010643"}}}


id: MONDO:0009969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal-genital-middle ear anomalies","secondary_identifiers":["MESH:C564849","MEDGEN:341454","OMIM:267400","GARD:4664","UMLS:C1849432","Orphanet:1092"],"synonyms":[{"name":"renal genital middle ear anomalies","type":"related"},{"name":"renal, genital, and middle EAR anomalies","type":"related"}],"termid":"MONDO:0009969","xrefs":{"Monarch":{"xref_id":"0009969"}}}


id: GO:0061783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A catalytic activity that contributes to the degradation of peptidoglycan.","definition_xrefs":["GOC:dph","PMID:22748813","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan muralytic activity","termid":"GO:0061783"}


id: PBO:0090508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2","termid":"PBO:0090508"}


id: SO:0001454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negatively charged, hydorophilic amino acid encoded by the codons GAA and GAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid","synonyms":[{"name":"E","type":"exact"},{"name":"Glu","type":"exact"},{"name":"glutamic acid","type":"exact"}],"termid":"SO:0001454"}


id: PBO:0081193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 5","termid":"PBO:0081193"}


id: GO:1902797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of snoRNA processing","termid":"GO:1902796"},{"relation_name":"is_a","term_name":"negative regulation of snoRNA metabolic process","termid":"GO:1903324"},{"relation_name":"negatively_regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"negative regulation of snoRNA processing","synonyms":[{"name":"down regulation of snoRNA processing","type":"exact"},{"name":"down-regulation of snoRNA processing","type":"exact"},{"name":"downregulation of snoRNA processing","type":"exact"},{"name":"inhibition of snoRNA processing","type":"narrow"}],"termid":"GO:1902797"}


id: MONDO:0009499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal disorder that affects the white matter of the central and peripheral nervous systems. It includes infantile, late-infantile/juvenile and adult forms.","definition_xrefs":["Orphanet:487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002561","MONDO:0005244","MONDO:0005066","MONDO:0005559","MONDO:0002525"],"is_obsolete":false,"name":"Krabbe disease","secondary_identifiers":["MedDRA:10023492","icd11.foundation:796317173","NORD:1368","SCTID:189979005","MESH:D007965","OMIM:245200","NANDO:1200074","NCIT:C61254","DOID:10587","UMLS:C0023521","SCTID:192782005","MEDGEN:44131","ICD10CM:E75.23","GARD:6844","NANDO:2200564"],"synonyms":[{"name":"GALC deficiency","type":"exact"},{"name":"GALC enzyme deficiency","type":"exact"},{"name":"GLD","type":"related"},{"name":"Krabbe disease","type":"exact"},{"name":"Krabbe leukodystrophy","type":"related"},{"name":"Krabbe's disease","type":"exact"},{"name":"Krabbe's leukodystrophy","type":"exact"},{"name":"Leukodystrophy, Krabbe's","type":"exact"},{"name":"beta galactocerebrosidase deficiency","type":"exact"},{"name":"diffuse globoid body sclerosis","type":"exact"},{"name":"galactocerebrosidase deficiency","type":"exact"},{"name":"galactosylceramidase deficiency","type":"exact"},{"name":"galactosylceramide Beta-galactosidase deficiency","type":"related"},{"name":"galactosylceramide lipidosis","type":"exact"},{"name":"globoid cell leukodystrophy","type":"exact"},{"name":"globoid cell leukoencephalopathy","type":"exact"},{"name":"later onset Krabbe disease","type":"narrow"},{"name":"later-onset Krabbe disease","type":"narrow"}],"termid":"MONDO:0009499","xrefs":{"Monarch":{"xref_id":"0009499"}}}


id: MONDO:0012098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 20 (SCA20) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by cerebellar dysarthria as the initial typical manifestation.","definition_xrefs":["Orphanet:101110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 20","secondary_identifiers":["icd11.foundation:960716995","DOID:0050971","MEDGEN:373352","MESH:C537199","OMIM:608687","GARD:9997","SCTID:718771009","UMLS:C1837541"],"synonyms":[{"name":"SCA20","type":"exact"},{"name":"chromosome 11q12 duplication syndrome, 260-Kb","type":"related"},{"name":"spinocerebellar ataxia 20","type":"related"},{"name":"spinocerebellar ataxia type 20","type":"exact"},{"name":"spinocerebellar ataxia with dysphonia","type":"related"},{"name":"spinocerebellar ataxia with spasmodic cough","type":"related"}],"termid":"MONDO:0012098","xrefs":{"Monarch":{"xref_id":"0012098"}}}


id: MONDO:0008788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IRIDA (Iron-refractory iron deficiency anemia) syndrome is a rare autosomal recessive iron metabolism disorder characterized by iron deficiency anemia (hypochromic, microcytic) that is often unresponsive to oral iron intake and partially responsive to parenteral iron treatment.","definition_xrefs":["Orphanet:209981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcytic anemia","termid":"MONDO:0001245"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"IRIDA syndrome","secondary_identifiers":["MEDGEN:39081","GARD:10957","OMIM:206200","MESH:C562385","UMLS:C0085576","SCTID:722005000"],"synonyms":[{"name":"IRIDA","type":"related"},{"name":"IRIDA syndrome","type":"exact"},{"name":"anemia, hypochromic microcytic, with defect in iron metabolism","type":"related"},{"name":"iron-handling disorder, hereditary","type":"related"},{"name":"iron-refractory iron deficiency anaemia","type":"exact"},{"name":"iron-refractory iron deficiency anemia","type":"exact"},{"name":"pseudo-iron-deficiency Anaemia","type":"related"},{"name":"pseudo-iron-deficiency Anemia","type":"related"}],"termid":"MONDO:0008788","xrefs":{"Monarch":{"xref_id":"0008788"}}}


id: MONDO:1011426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa , non-human animal","secondary_identifiers":["OMIA:000342"],"termid":"MONDO:1011426","xrefs":{"Monarch":{"xref_id":"1011426"}}}


id: PATO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased diameter","termid":"PATO:0001714"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased anterior-posterior diameter","synonyms":[{"name":"high anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002043"}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: GO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extraocular skeletal muscle development","termid":"GO:0014726"}


id: MONDO:0010445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete McLeod syndrome (obsolete MONDO:0010445)","termid":"MONDO:0010445","xrefs":{"Monarch":{"xref_id":"0010445"}}}


id: FYPO:0000090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-ethylmaleimide. Cells stop growing (and may die) at a concentration of N-ethylmaleimide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to N-ethylmaleimide","synonyms":[{"name":"hypersensitive to N-ethylmaleimide","type":"exact"},{"name":"sensitive to N-ethylmaleimide during mitotic cell cycle","type":"related"},{"name":"sensitive to N-ethylmaleimide during vegetative growth","type":"exact"},{"name":"sensitive to NEM","type":"exact"}],"termid":"FYPO:0000090"}


id: PBO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.-","termid":"PBO:0001791"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:dph","PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: GO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"part_of","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}


id: GO:0009277
data:
  {"annotated_genes":["SJAG_01970","SJAG_01028","SJAG_04184","SJAG_04723","SJAG_00239","SJAG_01086","SJAG_02192","SJAG_03903","SJAG_04864","SJAG_03295","SJAG_00784","SJAG_01290","SJAG_00218","SJAG_01755","SJAG_04238","SJAG_04327","SJAG_03013","SJAG_04073","SJAG_06622","SJAG_00027","SJAG_03828","SJAG_00620","SJAG_03057","SJAG_06621","SJAG_00340","SJAG_03204","SJAG_00096","SJAG_01321","SJAG_02916","SJAG_01288","SJAG_02649","SJAG_02222","SJAG_02135","SJAG_01017","SJAG_02945","SJAG_02478","SJAG_02093","SJAG_04236","SJAG_01835","SJAG_01975","SJAG_00876","SJAG_04067","SJAG_04771","SJAG_03483","SJAG_04720"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73084,74281,75114,75286,76278,78205,78448,79687,89386,89583,91069,93493,101037,101978,105650,106245,108478,108479,108480,108481,108482,108483,108484,112927,112928,114074,114353,115205,115228,117389,117965],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[117397,113676,108637,89708,113970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[58676,65204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[91244],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[106409,102501,116169,102246,102500],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[86959],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"A rigid yet dynamic structure surrounding the plasma membrane that affords protection from stresses and contributes to cell morphogenesis, consisting of extensively cross-linked glycoproteins and carbohydrates. The glycoproteins may be modified with N- or O-linked carbohydrates, or glycosylphosphatidylinositol (GPI) anchors; the polysaccharides are primarily branched glucans, including beta-linked and alpha-linked glucans, and may also include chitin and other carbohydrate polymers, but not cellulose or pectin. Enzymes involved in cell wall biosynthesis are also found in the cell wall. Note that some forms of fungi develop a capsule outside of the cell wall under certain circumstances; this is considered a separate structure.","definition_xrefs":["GOC:mtg_sensu","ISBN:3540601864","GOC:mcc","PMID:11283274","PMID:16927300","PMID:3319422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"fungal-type cell wall","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan-containing cell wall","type":"related"},{"name":"chitin- and beta-glucan-containing cell wall","type":"narrow"},{"name":"chitin-containing cell wall","type":"related"}],"termid":"GO:0009277","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0043188":null,"GO:0070263":null}}


id: GO:0102923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-N-debenzoyltaxol + benzoyl-CoA = CoA + H+ + taxol.","definition_xrefs":["RHEA:33687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8859"],"termid":"GO:0102923"}


id: PBO:0042877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 157","termid":"PBO:0042877"}


id: MONDO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary spastic paraplegia (obsolete MONDO:0002315)","termid":"MONDO:0002315","xrefs":{"Monarch":{"xref_id":"0002315"}}}


id: MONDO:1010473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, horse","secondary_identifiers":["OMIA:000795-9796"],"termid":"MONDO:1010473","xrefs":{"Monarch":{"xref_id":"1010473"}}}


id: MONDO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, childhood neuromuscular form","secondary_identifiers":["GARD:17399","UMLS:C1856305","MEDGEN:343524","Orphanet:308698"],"synonyms":[{"name":"GBE deficiency, childhood neuromuscular form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, childhood neuromuscular form","type":"exact"},{"name":"GSD type 4, childhood neuromuscular form","type":"exact"},{"name":"GSDIV, childhood neuromuscular form","type":"exact"},{"name":"glycogen storage disease type 4, childhood neuromuscular form","type":"exact"},{"name":"glycogen storage disease type IV, childhood neuromuscular form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, childhood neuromuscular form","type":"exact"},{"name":"glycogenosis type 4, childhood neuromuscular form","type":"exact"},{"name":"glycogenosis type IV, childhood neuromuscular form","type":"exact"}],"termid":"MONDO:0017700","xrefs":{"Monarch":{"xref_id":"0017700"}}}


id: PBO:0007873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin microtubule-binding subunit, p150-Glued Ssm4","termid":"PBO:0007873"}


id: PBO:0091188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2","termid":"PBO:0091188"}


id: SO:1000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The deletion of one or more amino acids from the polypeptide, without affecting the surrounding sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000097 sequence_variant_causing_amino_acid_deletion (obsolete SO:1000097)","synonyms":[{"name":"mutation causing amino acid deletion","type":"related"},{"name":"sequence variant causing amino acid deletion","type":"exact"}],"termid":"SO:1000097"}


id: PBO:0058359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4732","termid":"PBO:0058359"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: PBO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase copper chaperone Ccs1","termid":"PBO:0002807"}


id: PBO:0080822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulokinase","termid":"PBO:0080822"}


id: PBO:0067875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 177","termid":"PBO:0067875"}


id: SO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that falls in the region between the 3rd and 6th base after splice junction (5' end of intron).","direct_ancestors":[{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_region_variant","synonyms":[{"name":"splice donor region variant","type":"exact"}],"termid":"SO:0002170"}


id: MONDO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete exposure-related interstitial lung disease (obsolete MONDO:0017040)","secondary_identifiers":["Orphanet:264984"],"termid":"MONDO:0017040","xrefs":{"Monarch":{"xref_id":"0017040"}}}


id: PBO:0017499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane nicotinic acid transmembrane transporter (predicted)","termid":"PBO:0017499"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: MONDO:0700248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant epidermolytic ichthyosis","termid":"MONDO:0020702"},{"relation_name":"is_a","term_name":"epidermolytic hyperkeratosis 2","termid":"MONDO:0958184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 2A, autosomal dominant","secondary_identifiers":["OMIM:620150","UMLS:C5882671","MEDGEN:1846123"],"termid":"MONDO:0700248","xrefs":{"Monarch":{"xref_id":"0700248"}}}


id: PBO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SNR128","termid":"PBO:0016082"}


id: GO:0106427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"},{"relation_name":"negatively_regulates","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106427"}


id: GO:0017111
data:
  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id: GO:2000957
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclodextrin catabolic process","synonyms":[{"name":"regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000957"}


id: PBO:0056102
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6B","termid":"PBO:0056102"}


id: PBO:0065874
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB28, member RAS oncogene family pseudogene 2","termid":"PBO:0065874"}


id: PBO:0116758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCE1 pseudogene 4","termid":"PBO:0116758"}


id: PBO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase (predicted)","termid":"PBO:0001508"}


id: PBO:0085289
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisome-specific receptor important for peroxisome inheritance; co-fractionates with peroxisome membranes and co-localizes with peroxisomes in vivo; physically interacts with the myosin V motor Myo2p; INP2 is not an essential gene","termid":"PBO:0085289"}


id: PBO:0045795
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like repeats and discoidin domains 3","termid":"PBO:0045795"}


id: PBO:0057403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-5","termid":"PBO:0057403"}


id: MONDO:0015595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posttransplant acute limbic encephalitis is a rare, acquired, non-paraneoplastic limbic encephalitis disorder, that develops in the setting of treatment-related immunosuppression, typically after allogeneic hemapoietic stem cell transplantation, characterized by onset of confusion, headache, anterograde amnesia, seizures and/or loss of consciousness 2-6 weeks following transplantation. Bilateral, non-enhancing T2 hyperintensities in limbic structures are observed on magnetic resonance imaging. Mild cerebrospinal fluid pleocytosis and syndrome of inappropriate antidiuretic hormone secretion may also be associated.","definition_xrefs":["Orphanet:163921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"},{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posttransplant acute limbic encephalitis","secondary_identifiers":["UMLS:C4750744","MEDGEN:1657779","GARD:20051"],"synonyms":[{"name":"PALE","type":"exact"},{"name":"pale","type":"exact"}],"termid":"MONDO:0015595","xrefs":{"Monarch":{"xref_id":"0015595"}}}


id: PBO:0027051
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_post-anaphase_array_with_increased_number_of_microtubules","termid":"PBO:0027051"}


id: PBO:0071143
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 6","termid":"PBO:0071143"}


id: MONDO:0018536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adenocarcinoma of the gallbladder and extrahepatic biliary tract is a rare epithelial carcinoma, arising either in the gallbladder itself or from the epithelium lining the extrahepatic biliary tree, cystic duct and/or peribiliary gland, characterized by nonspecific symptoms, such as abdominal pain, jaundice and vomiting and sometimes mimicking benign biliary diseases. Chronic biliary epithelial inflammation (e.g. primary sclerosing cholangitis, cholelithiasis, choledocholithiasis, liver fluke infestation) is a major risk factor.","definition_xrefs":["Orphanet:424991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"carcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","secondary_identifiers":["SCTID:765741003","UMLS:C4707555","MEDGEN:1633887","GARD:21791"],"synonyms":[{"name":"adenocarcinoma of gallbladder and EBT","type":"exact"},{"name":"adenocarcinoma of the gallbladder and EBT","type":"exact"},{"name":"adenocarcinoma of the gallbladder and extrahepatic biliary tract","type":"exact"}],"termid":"MONDO:0018536","xrefs":{"Monarch":{"xref_id":"0018536"}}}


id: FYPO:0007838
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:34019809","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"normal NAT activity","type":"related"},{"name":"normal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007838"}


id: PBO:0029409
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h+_cells","termid":"PBO:0029409"}


id: GO:0015883
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  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The directed movement of flavin-adenine dinucleotide (FAD) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"FAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin adenine dinucleotide transport","type":"exact"},{"name":"flavin-adenine dinucleotide transport","type":"exact"}],"termid":"GO:0015883","terms_by_termid":{"GO:1990548":null}}


id: GO:0022818
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a sodium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium ion uniporter activity","termid":"GO:0022818"}


id: FYPO:0007459
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["PMID:32848252","PomBase:mah","GO:0140510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during vegetative growth","type":"exact"}],"termid":"FYPO:0007459"}


id: PBO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 11","termid":"PBO:0070706"}


id: SO:0000229
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tyrosyl tRNA (SO:000272).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine_tRNA_primary_transcript","synonyms":[{"name":"tyrosine tRNA primary transcript","type":"exact"}],"termid":"SO:0000229"}


id: MONDO:0003258
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma characterized by the presence of hobnail endothelial cells.","definition_xrefs":["NCIT:C27506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hobnail hemangioma","secondary_identifiers":["Orphanet:675362","MEDGEN:91080","UMLS:C0346076","DOID:505","SCTID:254790003"],"synonyms":[{"name":"Targetoid Hemosiderotic hemangioma","type":"exact"},{"name":"hobnail hemangioma","type":"exact"}],"termid":"MONDO:0003258","xrefs":{"Monarch":{"xref_id":"0003258"}}}


id: GO:0016804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a N-terminal proline from a peptide.","definition_xrefs":["EC:3.4.11.5"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl aminopeptidase activity (obsolete GO:0016804)","synonyms":[{"name":"Pro-X aminopeptidase activity","type":"related"},{"name":"cytosol aminopeptidase V","type":"related"},{"name":"proline aminopeptidase","type":"broad"},{"name":"proline iminopeptidase activity","type":"exact"},{"name":"prolyl aminopeptidase activity","type":"exact"}],"termid":"GO:0016804"}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: PBO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A2","termid":"PBO:0039711"}


id: GO:1903654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:19328067"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903654)","termid":"GO:1903654"}


id: PBO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1 (predicted)","termid":"PBO:0002302"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: GO:0033328
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89894],"is_not":false,"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane.","definition_xrefs":["PMID:17020786","GOC:rb","PMID:15133130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"peroxisome membrane targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PMP targeting signal (mPTS) binding","type":"exact"},{"name":"PMP targeting signal binding","type":"exact"},{"name":"mPTS binding","type":"exact"},{"name":"peroxisomal membrane protein (PMP) targeting signal (mPTS) binding","type":"exact"}],"termid":"GO:0033328","terms_by_termid":{"GO:0033328":null}}


id: PBO:0071987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 16","termid":"PBO:0071987"}


id: GO:0141018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a component of the host extracellular matrix. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23586629","PMID:15228540","PMID:21270401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host via host extracellular matrix","synonyms":[{"name":"adhesion of symbiont to host extracellular matrix via collagen","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via fibronectin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via integrin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via laminin","type":"narrow"},{"name":"adhesion of symbiont to host extracellular matrix via vitronectin","type":"narrow"}],"termid":"GO:0141018"}


id: MONDO:0012849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome 9","secondary_identifiers":["GARD:15549","NCIT:C181002","UMLS:C2676788","MESH:C567364","MEDGEN:382940","OMIM:612285","DOID:0111004"],"synonyms":[{"name":"CC2D2A Joubert syndrome","type":"exact"},{"name":"JBTS9","type":"exact"},{"name":"Joubert syndrome 9","type":"exact"},{"name":"Joubert syndrome 9/15, digenic","type":"related"},{"name":"Joubert syndrome caused by mutation in CC2D2A","type":"exact"},{"name":"Joubert syndrome type 9","type":"exact"}],"termid":"MONDO:0012849","xrefs":{"Monarch":{"xref_id":"0012849"}}}


id: MONDO:0009945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurometabolic disease characterized by recurrent intractable seizures in the prenatal, neonatal and postnatal period that are resistant to anti-epileptic drugs (AEDs) but that are responsive to pharmacological dosages of pyridoxine (vitamin B6).","definition_xrefs":["Orphanet:3006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyridoxine metabolism","termid":"MONDO:0019237"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy","secondary_identifiers":["MEDGEN:340341","MESH:C536254","UMLS:C1849508","DOID:0080768","NORD:1639","SCTID:734434007","GARD:9298"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"antiquitin deficiency","type":"exact"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"exact"},{"name":"vitamin B6-dependent seizures","type":"exact"}],"termid":"MONDO:0009945","xrefs":{"Monarch":{"xref_id":"0009945"}}}


id: PBO:0066035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 4","termid":"PBO:0066035"}


id: PR:P21547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- var1 gene.","definition_xrefs":["UniProtKB:P21547","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein var1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.08","synonyms":[{"name":"Spom972h-var1","type":"exact"}],"termid":"PR:P21547"}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: GO:0032336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin secretion","termid":"GO:0032335"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"negatively_regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of activin secretion","synonyms":[{"name":"down regulation of activin secretion","type":"exact"},{"name":"down-regulation of activin secretion","type":"exact"},{"name":"downregulation of activin secretion","type":"exact"},{"name":"inhibition of activin secretion","type":"narrow"}],"termid":"GO:0032336"}


id: PBO:0036383
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DPS1","termid":"PBO:0036383"}


id: PBO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 3","termid":"PBO:0050379"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: MONDO:0030958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 35, childhood-onset","secondary_identifiers":["OMIM:619921","DOID:0060955","UMLS:C5677003","MEDGEN:1801185"],"synonyms":[{"name":"DYT35","type":"exact"},{"name":"dystonia 35, childhood-onset","type":"exact"}],"termid":"MONDO:0030958","xrefs":{"Monarch":{"xref_id":"0030958"}}}


id: MONDO:0011261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepiphyseal dysplasia characterized by spondyloepiphyseal dysplasia, craniosynostosis, cataracts, cleft palate and intellectual deficit. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:163649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","secondary_identifiers":["OMIM:602611","SCTID:718766002","UMLS:C1865134","MEDGEN:355919","GARD:16993","DOID:0112294","MESH:C566515"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","type":"exact"},{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and mental retardation","type":"exact"},{"name":"spondyloepiphyseal dysplasia-craniosynostosis-cleft palate-cataract-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011261","xrefs":{"Monarch":{"xref_id":"0011261"}}}


id: MONDO:0010070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive brachyolmia","termid":"MONDO:0018662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia type 1, Hobaek type","secondary_identifiers":["OMIM:271530","MESH:C537099","icd11.foundation:1213374086","Orphanet:93301","MEDGEN:338605","UMLS:C1849055","GARD:995"],"synonyms":[{"name":"BCYM1A","type":"exact"},{"name":"brachyolmia type 1, Hobaek type","type":"exact"},{"name":"brachyolmia, recessive type of Hobaek","type":"related"},{"name":"spondylodysplasia with Pure brachyolmia","type":"related"}],"termid":"MONDO:0010070","xrefs":{"Monarch":{"xref_id":"0010070"}}}


id: PBO:0042639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Y-linked 14 pseudogene","termid":"PBO:0042639"}


id: PBO:0073514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 7","termid":"PBO:0073514"}


id: FYPO:0003557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is higher than normal. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["SO:0000644","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered antisense RNA level during vegetative growth","termid":"FYPO:0005857"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased antisense RNA level","synonyms":[{"name":"increased antisense RNA accumulation","type":"related"},{"name":"increased antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased antisense RNA level during vegetative growth","type":"exact"},{"name":"increased antisense RNA transcript level","type":"exact"},{"name":"increased level of antisense transcripts","type":"exact"}],"termid":"FYPO:0003557"}


id: FYPO:0009030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amitrole than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to amitrole","synonyms":[{"name":"resistance to amitrole during mitotic cell cycle","type":"related"},{"name":"resistance to amitrole during vegetative growth","type":"exact"},{"name":"resistant to amitrole","type":"exact"}],"termid":"FYPO:0009030"}


id: MONDO:0012981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SLC4A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary spherocytosis type 4","secondary_identifiers":["OMIM:612653","UMLS:C2675212","MEDGEN:436375","DOID:0110919","GARD:15576","MESH:C567208"],"synonyms":[{"name":"HS4","type":"exact"},{"name":"SLC4A1 hereditary spherocytosis","type":"exact"},{"name":"SPH4","type":"exact"},{"name":"hereditary spherocytosis 4","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SLC4A1","type":"exact"},{"name":"spherocytosis, hereditary, 4","type":"related"},{"name":"spherocytosis, type 4","type":"related"}],"termid":"MONDO:0012981","xrefs":{"Monarch":{"xref_id":"0012981"}}}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: PBO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHromodomain Protein","termid":"PBO:0001419"}


id: MONDO:0006430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mantle cell lymphoma occurring in the spleen.","definition_xrefs":["NCIT:C7306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mantle cell lymphoma","termid":"MONDO:0018876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic mantle cell lymphoma","secondary_identifiers":["MEDGEN:384473","EFO:1000549","UMLS:C2018777"],"synonyms":[{"name":"splenic mantle cell lymphoma","type":"exact"}],"termid":"MONDO:0006430","xrefs":{"Monarch":{"xref_id":"0006430"}}}


id: PBO:0050445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R pseudogene 3","termid":"PBO:0050445"}


id: PBO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNN3 divergent transcript","termid":"PBO:0043453"}


id: PBO:0078665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 2-1","termid":"PBO:0078665"}


id: GO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoarabinomannan.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor binding","termid":"GO:0034235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lipoarabinomannan binding","synonyms":[{"name":"LAM binding","type":"exact"}],"termid":"GO:0001876"}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: PR:O13864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An importin subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01479","PANTHER:PTHR10527:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.03c","secondary_identifiers":["UniProtKB:O13864"],"synonyms":[{"name":"Spom972h-KPNB1","type":"exact"},{"name":"importin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit beta-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin-95 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13864"}


id: PR:000050399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, MOD:00047.","definition_xrefs":["PMID:23333317","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/Phos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/Phos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, MOD:00047","type":"narrow"},{"name":"cut12/Phos(T75,T78)","type":"exact"}],"termid":"PR:000050399"}


id: GO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-galloyl-beta-D-glucose = 1,6-bis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["EC:2.3.1.90","RHEA:11416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-glucogallin O-galloyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00049","MetaCyc:2.3.1.90-RXN"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1-O-galloyl-beta-D-glucose O-galloyltransferase activity","type":"related"}],"termid":"GO:0047201"}


id: PBO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13B (pseudogene)","termid":"PBO:0056822"}


id: PBO:0041310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf49 divergent transcript","termid":"PBO:0041310"}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:22228629","PMID:23430248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: MONDO:0006504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of metabolic disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired metabolic disease","secondary_identifiers":["EFO:1000639","DOID:0060158"],"synonyms":[{"name":"acquired metabolic disease","type":"exact"}],"termid":"MONDO:0006504","xrefs":{"Monarch":{"xref_id":"0006504"}}}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: PBO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted)","termid":"PBO:0004125"}


id: GO:1990420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The septation initiation signaling process by which the activity of the septation initiation network (SIN) is activated asymmetrically on the spindle pole bodies.","definition_xrefs":["PMID:22786806"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of septation initiation network asymmetry (obsolete GO:1990420)","synonyms":[{"name":"establishment of SIN asymmetry","type":"exact"}],"termid":"GO:1990420"}


id: GO:1900466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:19233144","GOC:dgf","PMID:8455631"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900466)","synonyms":[{"name":"activation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of arginine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900466"}


id: FYPO:0004019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"normal succinate cytochrome c oxidoreductase","type":"related"},{"name":"normal succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"}],"termid":"FYPO:0004019"}


id: PBO:0091384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ca(2+)/H(+) antiporter Gdt2","termid":"PBO:0091384"}


id: MONDO:0019007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal atresia","secondary_identifiers":["MedDRA:10046879","MEDGEN:232948","Orphanet:65681","HP:0000148","UMLS:C1321884","icd11.foundation:1126562070","GARD:18867"],"termid":"MONDO:0019007","xrefs":{"Monarch":{"xref_id":"0019007"}}}


id: PBO:0076920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor B1, mitochondrial","termid":"PBO:0076920"}


id: GO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic process through fructose-6-phosphate in which fructose is catabolized into pyruvate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"glycolytic process from fructose through fructose-6-phosphate","synonyms":[{"name":"glycolysis from fructose through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061616"}


id: GO:0050524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme B + methyl-coenzyme M = coenzyme M-coenzyme B heterodisulfide + methane. Methyl-CoM is also known as 2-(methylthio)ethanesulfonate, coenzyme B as N-(7-mercaptoheptanoyl)threonine 3-O-phosphate, and coenzyme M-coenzyme B heterodisulfide as CoM-S-S-CoB.","definition_xrefs":["EC:2.8.4.1","RHEA:12532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"coenzyme-B sulfoethylthiotransferase activity","secondary_identifiers":["KEGG_REACTION:R04541","GO:0018552","UM-BBD_reactionID:r0356","MetaCyc:METHYL-COM-HTP-RXN"],"synonyms":[{"name":"2-(methylthio)ethanesulfonate:N-(7-thioheptanoyl)-3-O-phosphothreonine S-(2-sulfoethyl)thiotransferase activity","type":"related"},{"name":"coenzyme-B sulphoethylthiotransferase activity","type":"exact"},{"name":"methyl coenzyme M reductase activity","type":"related"},{"name":"methyl-CoM reductase activity","type":"related"},{"name":"methyl-coenzyme-M reductase activity","type":"exact"}],"termid":"GO:0050524"}


id: GO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.","definition_xrefs":["GOC:BHF","PMID:11812799","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674","GO:0000976"],"is_obsolete":false,"name":"E-box binding","synonyms":[{"name":"E-box promoter binding","type":"exact"}],"termid":"GO:0070888"}


id: MONDO:0015313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral choanal atresia is a congenital anomaly that is usually sporadic (but some familial cases have been reported), is more commonly seen in females than in males (2:1), and where the nose is blocked on both sides by bony or soft tissue formed during embryological development. It is characterized by respiratory distress relieved by crying and rhinorrhea that presents at birth.","definition_xrefs":["Orphanet:137920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia","termid":"MONDO:0012155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, bilateral","secondary_identifiers":["UMLS:C4025317","icd11.foundation:1138913171","MEDGEN:870857","GARD:19890"],"termid":"MONDO:0015313","xrefs":{"Monarch":{"xref_id":"0015313"}}}


id: MONDO:0020105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic anemia due to hexose monophosphate shunt and glutathione metabolism anomalies (obsolete MONDO:0020105)","secondary_identifiers":["icd11.foundation:2071787420","Orphanet:98370"],"termid":"MONDO:0020105","xrefs":{"Monarch":{"xref_id":"0020105"}}}


id: GO:0070690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) into glycine and acetaldehyde, with acetaldehyde being subsequently converted to acetyl-CoA.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5436","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"L-threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"L-threonine catabolic process to acetyl-CoA","synonyms":[{"name":"L-threonine breakdown to acetyl-CoA","type":"exact"},{"name":"L-threonine catabolism to acetyl-CoA","type":"exact"},{"name":"L-threonine degradation to acetyl-CoA","type":"exact"},{"name":"threonine catabolic process to acetyl-CoA","type":"broad"}],"termid":"GO:0070690"}


id: PBO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cycloheximide","termid":"PBO:0030381"}


id: PBO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug66","termid":"PBO:0001592"}


id: PBO:0056577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 1","termid":"PBO:0056577"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: GO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis","secondary_identifiers":["GO:0042477","Wikipedia:Odontogenesis"],"synonyms":[{"name":"odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"odontogeny","type":"exact"},{"name":"odontosis","type":"exact"},{"name":"tooth development","type":"related"},{"name":"tooth morphogenesis","type":"exact"}],"termid":"GO:0042476"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["PMID:18977204","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of prostate induction by androgen receptor signaling pathway (obsolete GO:0060520)","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: PBO:0082323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in degradation of ubiquitinated substrates; contributes preferentially to ERAD; required for spindle pole body duplication; mainly nuclear localization","termid":"PBO:0082323"}


id: PR:Q9P7T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX60 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C694.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.02","secondary_identifiers":["UniProtKB:Q9P7T8"],"synonyms":[{"name":"Spom972h-DDX60","type":"exact"}],"termid":"PR:Q9P7T8"}


id: MONDO:0700079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast carcinoma which is positive for expression of estrogen receptor (ER), progesterone receptor (PR), and is negative for expression of human epidermal growth factor receptor 2 (HER2).","direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone-receptor positive breast cancer","termid":"MONDO:0000615"},{"relation_name":"is_a","term_name":"Her2-receptor negative breast cancer","termid":"MONDO:0000618"},{"relation_name":"is_a","term_name":"estrogen-receptor positive breast cancer","termid":"MONDO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hormone receptor-positive breast cancer","secondary_identifiers":["UMLS:C5442556","NCIT:C157056","MEDGEN:1825950"],"synonyms":[{"name":"HR-positive HER2-negative breast cancer","type":"exact"},{"name":"hormone receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0700079","xrefs":{"Monarch":{"xref_id":"0700079"}}}


id: PBO:0084954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-stress response protein; expression is activated by a variety of xenobiotic agents and environmental or physiological stresses; DDR2 has a paralog, HOR7, that arose from the whole genome duplication","termid":"PBO:0084954"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: PBO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E9","termid":"PBO:0075529"}


id: PBO:0084831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for translation of the COB mRNA; forms a complex with Cbp3p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation","termid":"PBO:0084831"}


id: PBO:0081499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 397","termid":"PBO:0081499"}


id: MONDO:0015721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hemophilia A is a form of hemophilia A characterized by a small deficiency of factor VIII leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mild hemophilia A","secondary_identifiers":["SCTID:26029002","MEDGEN:543975","GARD:17061","UMLS:C0272324"],"synonyms":[{"name":"mild factor VIII deficiency","type":"exact"},{"name":"mild haemophilia type A","type":"exact"},{"name":"mild hemophilia type A","type":"exact"}],"termid":"MONDO:0015721","xrefs":{"Monarch":{"xref_id":"0015721"}}}


id: PBO:0044773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 55","termid":"PBO:0044773"}


id: GO:0010637
data:
  {"annotated_genes":["SJAG_00304","SJAG_00855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101571,106007],"is_not":false,"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial fusion","termid":"GO:0010635"},{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitochondrial fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010637","terms_by_termid":{"GO:0010637":null}}


id: MONDO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the parasympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic nervous system disorder","secondary_identifiers":["MEDGEN:148205","UMLS:C0750945","SCTID:46091002"],"synonyms":[{"name":"disease of parasympathetic nervous system","type":"exact"},{"name":"disease or disorder of parasympathetic nervous system","type":"exact"},{"name":"disorder of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic nervous system disease","type":"exact"},{"name":"parasympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044995","xrefs":{"Monarch":{"xref_id":"0044995"}}}


id: PBO:0047862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q13)","termid":"PBO:0047862"}


id: PBO:0089505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA adenine glycosylase Myh1","termid":"PBO:0089505"}


id: GO:0004081
data:
  {"annotated_genes":["SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79943],"is_not":false,"summary":null,"term":"GO:0004081"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate.","definition_xrefs":["EC:3.6.1.17","PMID:4955726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.6.1.17-RXN","RHEA:22484","Reactome:R-HSA-5696197"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap(4)Aase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"Ap4Aase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleotidohydrolase activity","type":"related"},{"name":"bis(5'-adenosyl)-tetraphosphatase activity","type":"narrow"},{"name":"bis(5'-guanosyl)-tetraphosphatase activity","type":"narrow"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase","type":"narrow"},{"name":"diadenosine P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"diguanosinetetraphosphatase (asymmetrical) activity","type":"narrow"},{"name":"dinucleoside tetraphosphatase activity","type":"related"},{"name":"dinucleosidetetraphosphatase (asymmetrical) activity","type":"related"}],"termid":"GO:0004081","terms_by_termid":{"GO:0004081":null}}


id: GO:0005628
data:
  {"annotated_genes":["SJAG_00974","SJAG_01469","SJAG_04080","SJAG_03536","SJAG_04948","SJAG_02169","SJAG_03721","SJAG_04922","SJAG_03483","SJAG_00430","SJAG_03145","SJAG_01855","SJAG_04781","SJAG_03746","SJAG_03587","SJAG_00821","SJAG_02368","SJAG_04001","SJAG_04483","SJAG_01697","SJAG_00971","SJAG_02736","SJAG_03250","SJAG_00826","SJAG_03915","SJAG_03079","SJAG_00405","SJAG_02076","SJAG_04184","SJAG_04275"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87664,90186,90761,90973,92361,93035,93339,93944,94864,96131,97058,100367,101009,101232,102782,102830,103699,104520,106938,108629,108869,113677,115843,116532,117115,118644],"is_not":false,"summary":null,"term":"GO:0005628"},{"annotations":[102445,118159,98335],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[102446,118160,104832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The prospore membrane is a double-membraned structure that extends from the cytoplasmic face of the spindle pole bodies to encompass the spindle pole bodies and the four nuclear lobes that are formed during meiosis. It helps isolate the meiotic nuclei from the cytoplasm during spore formation and serves as a foundation for the formation of the spore walls. An example of this component is found in Schizosaccharomyces pombe.","definition_xrefs":["ISBN:0879693649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01855":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM","type":"exact"},{"name":"ascospore-type prospore membrane","type":"exact"},{"name":"forespore membrane","type":"related"}],"termid":"GO:0005628","terms_by_termid":{"GO:0005628":null,"GO:0070056":null,"GO:0070057":null}}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: GO:0031746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cysteinyl leukotriene receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl leukotriene receptor binding","termid":"GO:0031745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 cysteinyl leukotriene receptor binding","synonyms":[{"name":"type 1 cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031746"}


id: PBO:0078033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 23","termid":"PBO:0078033"}


id: GO:0097109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuroligin protein family, neuronal cell surface proteins that mediate synapse formation.","definition_xrefs":["GOC:BHF","PMID:21424692","GOC:sjp","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuroligin family protein binding","termid":"GO:0097109"}


id: MOD:01003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butyloxymethyl (Bum)","termid":"MOD:01003"}


id: FYPO:0004831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:16824200","GO:1990023","PomBase:mah","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone","termid":"FYPO:0003841"},{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle during anaphase","termid":"FYPO:0007729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase","type":"exact"}],"termid":"FYPO:0004831"}


id: MONDO:0021128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An characteristic of a disease in which the disease is manifested as an isolated feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic or isolated","termid":"MONDO:0021126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has an isolated presentation","termid":"MONDO:0021128","xrefs":{"Monarch":{"xref_id":"0021128"}}}


id: MONDO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenopathy","termid":"MONDO:0004603","xrefs":{"Monarch":{"xref_id":"0004603"}}}


id: GO:0090110
data:
  {"annotated_genes":["SJAG_03153","SJAG_02349","SJAG_02539","SJAG_00072","SJAG_03558","SJAG_05345","SJAG_05344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73104,76604,76962,77408,78298,78874,80238],"is_not":false,"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.","definition_xrefs":["GOC:ascb_2009","GOC:lb","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"COPII-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"COPII coat-cargo complex assembly","type":"related"},{"name":"cargo loading into COPII vesicle","type":"exact"},{"name":"cargo loading into COPII-coated vesicle","type":"exact"},{"name":"cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:0090110","terms_by_termid":{"GO:0090110":null}}


id: PBO:0074765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1C","termid":"PBO:0074765"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: PBO:0080487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5B2","termid":"PBO:0080487"}


id: GO:2000155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium-dependent cell motility","synonyms":[{"name":"positive regulation of ciliary cell motility","type":"related"}],"termid":"GO:2000155"}


id: MONDO:0003938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder colonic type adenocarcinoma","secondary_identifiers":["NCIT:C39835","DOID:6594","MEDGEN:267371","UMLS:C1511188"],"synonyms":[{"name":"bladder colonic type adenocarcinoma","type":"exact"},{"name":"bladder enteric type adenocarcinoma","type":"exact"}],"termid":"MONDO:0003938","xrefs":{"Monarch":{"xref_id":"0003938"}}}


id: PBO:0066026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 9","termid":"PBO:0066026"}


id: PBO:0073957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 6","termid":"PBO:0073957"}


id: GO:0014050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate secretion","synonyms":[{"name":"down regulation of glutamate secretion","type":"exact"},{"name":"down-regulation of glutamate secretion","type":"exact"},{"name":"downregulation of glutamate secretion","type":"exact"},{"name":"inhibition of glutamate secretion","type":"narrow"}],"termid":"GO:0014050"}


id: PBO:0040063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPIN-AP3S2 readthrough","termid":"PBO:0040063"}


id: MONDO:0005381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of bones.","definition_xrefs":["MESH:D001847"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone disorder","secondary_identifiers":["DOID:0080001","EFO:0004260","ICD9:733.99","ICD10CM:M80-M85","NANDO:2100291","UMLS:C0005940","ICD9:731.8","MEDGEN:14182","NANDO:2100293","SCTID:76069003"],"synonyms":[{"name":"bone element disease","type":"exact"},{"name":"bone element disease or disorder","type":"exact"},{"name":"disease of bone element","type":"exact"},{"name":"disease or disorder of bone element","type":"exact"},{"name":"disorder of bone element","type":"exact"},{"name":"rare bone disease related to a common gene or pathway defect","type":"related"},{"name":"skeletal disease","type":"related"}],"termid":"MONDO:0005381","xrefs":{"Monarch":{"xref_id":"0005381"}}}


id: FYPO:0007266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum (ER) colocalizes with eisosomes to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:32023460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cortical endoplasmic reticulum organization","termid":"FYPO:0007571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes","synonyms":[{"name":"decreased colocalization of cortical ER with eisosomes","type":"exact"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during mitotic cell cycle","type":"related"},{"name":"decreased colocalization of cortical endoplasmic reticulum with eisosomes during vegetative growth","type":"exact"},{"name":"decreased colocalization of tubular cortical ER with eisosomes","type":"exact"},{"name":"decreased cortical ER-eisosome colocalization","type":"exact"},{"name":"reduced colocalization of cortical endoplasmic reticulum with eisosomes","type":"exact"}],"termid":"FYPO:0007266"}


id: PATO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled","secondary_identifiers":["PATO:0001363"],"synonyms":[{"name":"helical","type":"related"},{"name":"helicoid","type":"related"},{"name":"helicoidal","type":"related"},{"name":"helix-shaped","type":"related"},{"name":"spiral","type":"exact"}],"termid":"PATO:0000404"}


id: FYPO:0007448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"abnormal macroautophagy during nitrogen starvation","termid":"FYPO:0004670"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"normal reticulophagy during nitrogen starvation","synonyms":[{"name":"normal ER autophagy during nitrogen starvation","type":"exact"},{"name":"normal ER degradation during nitrogen starvation","type":"related"},{"name":"normal ER-phagy during nitrogen starvation","type":"exact"},{"name":"normal endoplasmic reticulum autophagy during nitrogen starvation","type":"exact"},{"name":"normal reticulophagy during nitrogen depletion","type":"exact"},{"name":"normal reticulophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007448"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116586],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: PBO:0056716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 1","termid":"PBO:0056716"}


id: GO:0102821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bixin + S-adenosyl-L-methionine = bixin dimethyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete bixin methyltransferase activity (obsolete GO:0102821)","termid":"GO:0102821"}


id: PBO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endocytosis","termid":"PBO:0031776"}


id: MONDO:0012437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 21 multiple types","secondary_identifiers":["DOID:0110256","MESH:C565703","UMLS:C1857768","OMIM:610202","MEDGEN:347538"],"synonyms":[{"name":"CCA4","type":"narrow"},{"name":"CTRCT21","type":"exact"},{"name":"MAF early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 21 multiple types with or without microcornea","type":"exact"},{"name":"cataract 21, multiple types","type":"related"},{"name":"cataract 21, multiple types, with or without microcornea","type":"related"},{"name":"cataract, congenital, cerulean type, 4","type":"related"},{"name":"cataract, pulverulent, juvenile-onset","type":"related"},{"name":"congenital cataract cerulean type 4","type":"narrow"},{"name":"early-onset non-syndromic cataract caused by mutation in MAF","type":"exact"}],"termid":"MONDO:0012437","xrefs":{"Monarch":{"xref_id":"0012437"}}}


id: PBO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1","termid":"PBO:0043120"}


id: PBO:0014296
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. tabacum Ran-AI","termid":"PBO:0014296"}


id: PBO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 32","termid":"PBO:0070661"}


id: PBO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding binding protein Acb1 (predicted)","termid":"PBO:0018099"}


id: PBO:0062813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 4","termid":"PBO:0062813"}


id: PBO:0076592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 13","termid":"PBO:0076592"}


id: PBO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit AB1 pseudogene 1","termid":"PBO:0060729"}


id: GO:0140017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 crotonylated at lysine 18.","definition_xrefs":["PMID:27105114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0140566","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"histone H3K18cr reader activity","synonyms":[{"name":"H3K18cr modified histone binding","type":"narrow"}],"termid":"GO:0140017"}


id: MONDO:0017918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"White matter hypoplasia-corpus callosum agenesis-intellectual disability syndrome is a very rare neurological condition. The few patients described in the medical literature were characterized by brain anomalies; an unusual face with broad nasal root, wide spaced eyes (hypertelorism) and a very small chin (micrognathia); failure to thrive; severe intellectual disability ;and lack of muscle tone (hypotonia). Exams of the brain showed a poor development (hypoplasia) of the pale part of the brain known as white matter, and an absent or abnormal corpus callosum (nerve fibers joining the two hemispheres of the brain). Only a few cases have being described. The cause is unknown but may be related to a disorder of axonal development. The described cases seem to be inherited in an autosomal recessive or X-linked way. Corpus callosum agenesis is one of the more frequent congenital malformations. It can be either asymptomatic or associated with intellectual disability, epilepsy, or psychiatric syndromes. It can be part of several genetic syndromes, such as Aicardi syndrome, Andermann syndrome and Apert syndrome, trisomies 13, 18 ; or result from metabolic causes; drugs (cocaine); or viral infection (influenza). Many patients with corpus callosum anomalies have other brain anomalies, including white matter hypoplasia. There is no information on specific treatment for this condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white matter hypoplasia-corpus callosum agenesis-intellectual disability syndrome","secondary_identifiers":["GARD:12488","MEDGEN:419038","MESH:C536701","Orphanet:3207","UMLS:C2931292"],"synonyms":[{"name":"Curatolo Cilio Pessagno syndrome","type":"related"},{"name":"Curatolo-Cilio-Pessagno syndrome","type":"exact"},{"name":"familial white matter hypoplasia, agenesis of the corpus callosum, intellectual disability and growth deficiency","type":"related"}],"termid":"MONDO:0017918","xrefs":{"Monarch":{"xref_id":"0017918"}}}


id: PBO:0082485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carnitine acetyl-CoA transferase; present in both mitochondria and peroxisomes; transfers activated acetyl groups to carnitine to form acetylcarnitine which can be shuttled across membranes","termid":"PBO:0082485"}


id: PR:O13837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 4-aminobutyrate aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02170","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.07","secondary_identifiers":["UniProtKB:O13837"],"synonyms":[{"name":"GABA aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GABA transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GABA-AT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ABAT","type":"exact"},{"name":"gamma-amino-N-butyrate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13837"}


id: PBO:0066287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member M, pseudogene","termid":"PBO:0066287"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: MONDO:0100035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of epilepsy that is conceptualized as having a distinct structural brain abnormality that has been demonstrated to be associated with a substantially increased risk of epilepsy in appropriately designed studies. The structural brain abnormality can be acquired (such as due to stroke, trauma or infection) or may be of genetic origin; however, as we currently understand it, the structural brain abnormality is a separate disorder interposed between the acquired or genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"structural epilepsy","secondary_identifiers":["UMLS:C4524097","MEDGEN:1843494"],"termid":"MONDO:0100035","xrefs":{"Monarch":{"xref_id":"0100035"}}}


id: PR:O14236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar GTP-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.03c","secondary_identifiers":["UniProtKB:O14236"],"synonyms":[{"name":"SPAC6F6.03c","type":"related"},{"name":"Spom972h-GNL2","type":"exact"}],"termid":"PR:O14236"}


id: GO:0071935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of octopamine to a receptor on the surface of the target cell that contributes to a response to a food stimulus.","definition_xrefs":["PMID:19609300","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine signaling pathway","termid":"GO:0071927"},{"relation_name":"part_of","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine signaling pathway involved in response to food","synonyms":[{"name":"octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:0071935"}


id: GO:0052788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the glycosidic bond in an unsaturated saccharide between the unsaturated glucuronyl residue at the nonreducing terminus and the saccharide linked to the residue.","definition_xrefs":["PMID:12729728","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"d-4,5 unsaturated beta-glucuronyl hydrolase activity","synonyms":[{"name":"unsaturated beta-glucuronyl hydrolase activity","type":"exact"}],"termid":"GO:0052788"}


id: MONDO:0015480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of superior eyelid is a rare developmental defect during embryogenesis characterized by a typically unilateral, partial or full-thickness, variably sized defect of the superior eyelid, ranging from a small notch to complete absence of the entire lid, which is commonly triangular in shape (with base at eyelid margin) and located on the medial third of the lid. It can occur isolated, associated with other anomalies (e.g. ocular/orbital and facial), or as part of a syndrome.","definition_xrefs":["Orphanet:155884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"},{"relation_name":"is_a","term_name":"coloboma of eyelid","termid":"MONDO:0020357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of superior eyelid","secondary_identifiers":["MEDGEN:350283","SCTID:763132003","GARD:19977","UMLS:C1863872"],"synonyms":[{"name":"superior palpebral coloboma","type":"exact"}],"termid":"MONDO:0015480","xrefs":{"Monarch":{"xref_id":"0015480"}}}


id: MONDO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurovisceral storage disease with Curvilinear bodies (obsolete MONDO:0009753)","secondary_identifiers":["MESH:C564944","OMIM:257000"],"synonyms":[{"name":"neurovisceral storage disease with Curvilinear bodies","type":"exact"}],"termid":"MONDO:0009753","xrefs":{"Monarch":{"xref_id":"0009753"}}}


id: MONDO:0010509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the FRMPD4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 104","secondary_identifiers":["DOID:0112018","MEDGEN:934784","OMIM:300983","UMLS:C4310817","GARD:22696"],"synonyms":[{"name":"FRMPD4 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX104","type":"exact"},{"name":"intellectual developmental disorder, X-linked 104","type":"exact"},{"name":"intellectual disability, X-linked 104","type":"exact"},{"name":"intellectual disability, X-linked type 104","type":"exact"},{"name":"mental retardation, X-linked 104","type":"exact"},{"name":"mental retardation, X-linked type 104","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in FRMPD4","type":"exact"}],"termid":"MONDO:0010509","xrefs":{"Monarch":{"xref_id":"0010509"}}}


id: GO:0140570
data:
  {"annotated_genes":["SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76451],"is_not":false,"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the mitochondrial outer membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"extraction of mislocalized protein from outer mitochondrion membrane","type":"exact"}],"termid":"GO:0140570","terms_by_termid":{"GO:0140570":null}}


id: PBO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 3","termid":"PBO:0045726"}


id: PBO:0089146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh41","termid":"PBO:0089146"}


id: MONDO:0016701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligoastrocytic tumor (obsolete MONDO:0016701)","secondary_identifiers":["Orphanet:251651"],"synonyms":[{"name":"mixed oligodendroglial and astrocytic tumor","type":"exact"},{"name":"mixed oligodendroglial and astrocytic tumour","type":"exact"}],"termid":"MONDO:0016701","xrefs":{"Monarch":{"xref_id":"0016701"}}}


id: PBO:0073440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 2","termid":"PBO:0073440"}


id: GO:1901663
data:
  {"annotated_genes":["SJAG_04000","SJAG_01668","SJAG_01043","SJAG_00933","SJAG_00459","SJAG_06603","SJAG_00721","SJAG_01820","SJAG_01865","SJAG_04568","SJAG_04642","SJAG_01866","SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88653],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[119191,75895,76030,64732,78400,74185,80959,74753,80585,87160,119190,75626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quinone.","definition_xrefs":["GOC:pr","GOC:TermGenie","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinone biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["GO:0045426"],"synonyms":[{"name":"quinone anabolism","type":"exact"},{"name":"quinone biosynthesis","type":"exact"},{"name":"quinone cofactor anabolism","type":"related"},{"name":"quinone cofactor biosynthesis","type":"related"},{"name":"quinone cofactor biosynthetic process","type":"related"},{"name":"quinone cofactor formation","type":"related"},{"name":"quinone cofactor synthesis","type":"related"},{"name":"quinone formation","type":"exact"},{"name":"quinone synthesis","type":"exact"}],"termid":"GO:1901663","terms_by_termid":{"GO:0006744":null,"GO:1904775":null}}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: FYPO:0003833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific cell cycle phase. A cell cycle phase is any of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle phase","termid":"FYPO:0003833"}


id: GO:0055039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A crystalline exocytotic organelle composed of small, acidic proteins existing primarily as disulphide-linked dimers. The trichocyst is an organelle that releases long filamentous proteins that capture predators in net-like structures, to slow them down when the cell is disturbed. The protein is nontoxic and shaped like a long, striated, fibrous shaft.","definition_xrefs":["GOC:jid","GOC:rph","PMID:3667715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"trichocyst","secondary_identifiers":["Wikipedia:Trichocyst"],"termid":"GO:0055039"}


id: PBO:0119878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein, predicten translation activator for Atp9, Ppr6","termid":"PBO:0119878"}


id: GO:0050538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-2-amino acid + H2O = L-2-amino acid + NH3 + CO2. The N-carbamoyl-L-2-amino acid is a 2-ureido carboxylate.","definition_xrefs":["MetaCyc:3.5.1.87-RXN","EC:3.5.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-carbamoyl-L-amino-acid hydrolase activity","secondary_identifiers":["RHEA:17581"],"synonyms":[{"name":"L-carbamoylase activity","type":"related"},{"name":"N-carbamoyl-L-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050538"}


id: FYPO:0006895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PMID:30649994","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell tip during meiosis","synonyms":[{"name":"decreased protein localisation to cell tip during meiosis","type":"exact"},{"name":"decreased protein localization to cell end during meiosis","type":"exact"},{"name":"decreased protein localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006895"}


id: PBO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1 (predicted)","termid":"PBO:0001984"}


id: GO:0009288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.","definition_xrefs":["GOC:cilia","GOC:mtg_sensu","GOC:krc","GOC:jh2","PMID:7787060","Wikipedia:Flagellum#Bacterial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"},{"relation_name":"is_a","term_name":"membraneless organelle","termid":"GO:0043228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum","synonyms":[{"name":"flagellin-based flagellum","type":"exact"}],"termid":"GO:0009288"}


id: PBO:0028659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_anaphase-promoting_complex_binding","termid":"PBO:0028659"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: GO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucosylglycerol from one side of a membrane to the other. A glucosylglycerol is an alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transporter activity","termid":"GO:0051474"}


id: GO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a hot temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thermoception","termid":"GO:0050955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of hot stimulus","termid":"GO:0062036"}


id: GO:0060644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"}


id: PR:P40374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his5 gene.","definition_xrefs":["UniProtKB:P40374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.07c","synonyms":[{"name":"IGPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his5","type":"exact"}],"termid":"PR:P40374"}


id: PBO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD72 molecule","termid":"PBO:0042339"}


id: PBO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-38","termid":"PBO:0075027"}


id: PATO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle; attached at the broad end.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanceolate","synonyms":[{"name":"spear-shaped","type":"exact"}],"termid":"PATO:0001877"}


id: PBO:0026919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation","termid":"PBO:0026919"}


id: MONDO:0032648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mega-corpus-callosum syndrome with cerebellar hypoplasia and cortical malformations","secondary_identifiers":["MEDGEN:1648439","OMIM:618273","DOID:0111403","UMLS:C4748927"],"synonyms":[{"name":"MCCCHCM","type":"related"},{"name":"MEGA-CORPUS-CALLOSUM SYNDROME WITH CEREBELLAR HYPOPLASIA AND CORTICAL MALFORMATIONS","type":"related"}],"termid":"MONDO:0032648","xrefs":{"Monarch":{"xref_id":"0032648"}}}


id: GO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + H+(in) = monoatomic cation(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoatomic cation:proton antiporter activity (obsolete GO:0005451)","synonyms":[{"name":"monovalent cation:hydrogen antiporter activity","type":"exact"},{"name":"monovalent cation:proton antiporter activity","type":"related"}],"termid":"GO:0005451"}


id: PBO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in potassium ion transport Mdm28 (predicted)","termid":"PBO:0001388"}


id: SO:1000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The amino acid change following from the codon change changes the gross properties (size, charge, hydrophobicity) of the amino acid in that position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000061 sequence_variant_causing_nonconservative_missense_codon_change_in_transcript (obsolete SO:1000061)","synonyms":[{"name":"mutation causing nonconservative missense codon change in transcript","type":"related"},{"name":"sequence variant causing nonconservative missense codon change in transcript","type":"exact"}],"termid":"SO:1000061"}


id: FYPO:0007025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form N2-methylguanosine occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased tRNA guanosine N2-methylation","synonyms":[{"name":"decreased N2-methylguanosine level in tRNA","type":"related"},{"name":"decreased tRNA N2-methylguanosine formation","type":"exact"},{"name":"decreased tRNA guanosine N2-methylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA guanosine N2-methylation during vegetative growth","type":"exact"},{"name":"decreased tRNA m2G formation","type":"exact"},{"name":"reduced tRNA guanosine N2-methylation","type":"exact"}],"termid":"FYPO:0007025"}


id: PBO:0076857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 3","termid":"PBO:0076857"}


id: PATO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the start of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onset quality","termid":"PATO:0002325"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: PBO:0070359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 34","termid":"PBO:0070359"}


id: PBO:0063005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2","termid":"PBO:0063005"}


id: PBO:0079488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 8","termid":"PBO:0079488"}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: PBO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 2","termid":"PBO:0060423"}


id: PBO:0040158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 4","termid":"PBO:0040158"}


id: PBO:0072875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salvador family WW domain containing protein 1","termid":"PBO:0072875"}


id: PBO:0057385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548b","termid":"PBO:0057385"}


id: MONDO:0020386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with subaortic or doubly committed ventricular septal defect with pulmonary stenosis","secondary_identifiers":["GARD:19615","ICD10CM:Q21.3","Orphanet:99043","SCTID:253298003"],"synonyms":[{"name":"DORV with subaortic or doubly committed VSD with pulmonary stenosis","type":"exact"},{"name":"DORV, Fallot type","type":"exact"},{"name":"double outlet right ventricle, Fallot type","type":"exact"}],"termid":"MONDO:0020386","xrefs":{"Monarch":{"xref_id":"0020386"}}}


id: PBO:0080323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 87 pseudogene","termid":"PBO:0080323"}


id: PBO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 2, pseudogene","termid":"PBO:0044409"}


id: PBO:0049616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 19","termid":"PBO:0049616"}


id: MONDO:0002849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the liver.","definition_xrefs":["NCIT:C5834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"liver rhabdomyosarcoma","secondary_identifiers":["UMLS:C1333975","MEDGEN:232598","DOID:4047"],"synonyms":[{"name":"hepatic rhabdomyosarcoma","type":"exact"},{"name":"liver rhabdomyosarcoma","type":"exact"},{"name":"liver rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of liver","type":"exact"},{"name":"rhabdomyosarcoma of liver","type":"exact"},{"name":"rhabdomyosarcoma of the liver","type":"exact"}],"termid":"MONDO:0002849","xrefs":{"Monarch":{"xref_id":"0002849"}}}


id: PBO:0039948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 1","termid":"PBO:0039948"}


id: PBO:0058987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 pseudogene 1","termid":"PBO:0058987"}


id: MONDO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemorrhagic necrosis that was first demonstrated in rabbits with a two-step reaction, an initial local (intradermal) or general (intravenous) injection of a priming endotoxin (endotoxins) followed by a second intravenous endotoxin injection (provoking agent) 24 h later. The acute inflammation damages the small blood vessels. The following intravascular coagulation leads to capillary and venous thrombosis and necrosis. Shwartzman phenomenon can also occur in other species with a single injection of a provoking agent, and during infections or pregnancy. Its susceptibility depends on the status of immune system, coagulation, fibrinolysis, and blood flow.","definition_xrefs":["MESH:D012790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular hemostatic disease","termid":"MONDO:0003159"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Shwartzman phenomenon","secondary_identifiers":["UMLS:C0037018","MEDGEN:48656","DOID:3825","GARD:7636"],"synonyms":[{"name":"Shwartzman reaction","type":"exact"},{"name":"Shwartzman reaction (function)","type":"exact"}],"termid":"MONDO:0002783","xrefs":{"Monarch":{"xref_id":"0002783"}}}


id: GO:0044692
data:
  {"annotated_genes":["SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89164,104465],"is_not":false,"summary":null,"term":"GO:0044692"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an exoribonuclease.","definition_xrefs":["PMID:22570495","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease activator activity","termid":"GO:0170054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"exoribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044692","terms_by_termid":{"GO:0044692":null}}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: PBO:0113564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex beta subunit, Wbp1","termid":"PBO:0113564"}


id: PBO:0053881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1160","termid":"PBO:0053881"}


id: MONDO:0012722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dauwerse-Peters syndrome","secondary_identifiers":["OMIM:611733","UMLS:C2673203","MEDGEN:382037","MESH:C567093"],"synonyms":[{"name":"Dauwerse-Peters syndrome","type":"exact"},{"name":"short stature, Facial Dysmorphism, Severe brachydactyly, and syndactyly","type":"related"},{"name":"short stature, facial dysmorphism, severe brachydactyly and syndactyly","type":"related"}],"termid":"MONDO:0012722","xrefs":{"Monarch":{"xref_id":"0012722"}}}


id: PBO:0114383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane cysteine transmembrane transporter","termid":"PBO:0114383"}


id: PBO:0052510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 24","termid":"PBO:0052510"}


id: GO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-D-aspartate receptor-associated protein activity (obsolete GO:0004973)","synonyms":[{"name":"N-methyl-D-aspartate receptor-associated protein activity","type":"exact"}],"termid":"GO:0004973"}


id: FYPO:0006783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more carbohydrate metabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Carbohydrate metabolism RNAs are transcribed from genes whose products are involved in metabolism of one or more carbohydrates.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of carbohydrate metabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased carbohydrate metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of carbohydrate metabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of carbohydrate metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of carbohydrate metabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006783"}


id: GO:2000721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation (obsolete GO:2000721)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"activation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of nonstriated muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000721"}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: GO:0032129
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109044],"is_not":false,"summary":null,"term":"GO:0032129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0033558","GO:0140096","GO:0019213","GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K9 deacetylase activity","type":"exact"},{"name":"histone H3K9 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032129","terms_by_termid":{"GO:0032129":null}}


id: GO:0000700
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of single bases present in mismatches by the cleavage the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000700","terms_by_termid":{"GO:0000701":null}}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: PBO:0041285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF9 antisense RNA 1","termid":"PBO:0041285"}


id: FYPO:0006456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis II","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis II","type":"exact"},{"name":"abolished protein localization to meiosis II spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis II","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis II","type":"exact"}],"termid":"FYPO:0006456"}


id: PBO:0038949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenin","termid":"PBO:0038949"}


id: PBO:0030698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalase_activity","termid":"PBO:0030698"}


id: PBO:0048410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin","termid":"PBO:0048410"}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: PBO:0064540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 1, pseudogene","termid":"PBO:0064540"}


id: GO:1900977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of tatiopterin metabolic process","synonyms":[{"name":"regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900977"}


id: PBO:0087091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7B; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7B has a paralog, RPL7A, that arose from the whole genome duplication","termid":"PBO:0087091"}


id: PBO:0112981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); directly phosphorylated by TORC1 in a Pib2-dependent manner; localizes to the cytoplasm; ER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0112981"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: PBO:0038293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_extension","termid":"PBO:0038293"}


id: MONDO:1010052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, non-human animal","secondary_identifiers":["OMIA:000279"],"termid":"MONDO:1010052","xrefs":{"Monarch":{"xref_id":"1010052"}}}


id: PATO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lanceolate","termid":"PATO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lance-ovate","termid":"PATO:0002337"}


id: GO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic phenol-containing compound metabolic process","termid":"GO:0018959"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound biosynthetic process","synonyms":[{"name":"aerobic phenol-containing compound anabolism","type":"exact"},{"name":"aerobic phenol-containing compound biosynthesis","type":"exact"},{"name":"aerobic phenol-containing compound formation","type":"exact"},{"name":"aerobic phenol-containing compound synthesis","type":"exact"}],"termid":"GO:0046190"}


id: PBO:0054905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2319","termid":"PBO:0054905"}


id: PBO:0108507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform-cutting endonuclease Cce1","termid":"PBO:0108507"}


id: PBO:0038513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 4","termid":"PBO:0038513"}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: GO:0106064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["PMID:29056341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"cobalamin metabolic process","termid":"GO:0009235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0033013","GO:0006766"],"is_obsolete":false,"name":"regulation of cobalamin metabolic process","termid":"GO:0106064"}


id: PBO:0053237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 3","termid":"PBO:0053237"}


id: GO:1990735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location at a mitotic spindle pole body.","definition_xrefs":["PMID:11080156","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex localization","termid":"GO:0033566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"},{"name":"gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"gamma-tubulin complex localization to mitotic SPB","type":"exact"}],"termid":"GO:1990735"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:GALACTODEHYDROG-RXN","RHEA:21296"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: GO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A filamentous growth process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium such as an agar plate, exhibited by unicellular fungi under certain growth conditions.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}


id: GO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"},{"relation_name":"part_of","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["RHEA:16581","MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: MONDO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant anus melanoma (obsolete MONDO:0001891)","termid":"MONDO:0001891","xrefs":{"Monarch":{"xref_id":"0001891"}}}


id: PBO:0069303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 559, pseudogene","termid":"PBO:0069303"}


id: PBO:0078475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRHDE antisense RNA 1","termid":"PBO:0078475"}


id: MONDO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastric linitis plastica (gastric LP) is a malignant, diffuse, infiltrative gastric adenocarcinoma.","definition_xrefs":["Orphanet:36273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse gastric adenocarcinoma","termid":"MONDO:0005017"},{"relation_name":"is_a","term_name":"cancer-related condition","termid":"MONDO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric linitis plastica","secondary_identifiers":["MEDGEN:928895","ICDO:8142/3","GARD:18822","NCIT:C3190","UMLS:C4303226","DOID:4023","SCTID:721629005","MESH:D008039"],"synonyms":[{"name":"Borrmann gastric cancer type 4","type":"exact"},{"name":"leather-bottle stomach","type":"exact"},{"name":"linitis plastica","type":"exact"},{"name":"linitis plastica (morphologic abnormality)","type":"exact"},{"name":"linitis plastica of the stomach","type":"exact"}],"termid":"MONDO:0018184","xrefs":{"Monarch":{"xref_id":"0018184"}}}


id: GO:1901106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetracenomycin C.","definition_xrefs":["GOC:yaf","UniPathway:UPA00174","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tetracenomycin C biosynthetic process","synonyms":[{"name":"tetracenomycin C anabolism","type":"exact"},{"name":"tetracenomycin C biosynthesis","type":"exact"},{"name":"tetracenomycin C formation","type":"exact"},{"name":"tetracenomycin C synthesis","type":"exact"}],"termid":"GO:1901106"}


id: PBO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1 (predicted)","termid":"PBO:0005360"}


id: PBO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 9","termid":"PBO:0043654"}


id: PBO:0056142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor family member 3","termid":"PBO:0056142"}


id: PBO:0049765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 2","termid":"PBO:0049765"}


id: PBO:0065012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 16","termid":"PBO:0065012"}


id: GO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P680 chlorophylls on photosystem II donate an electron to a loosely bound acceptor molecule, the quinone Q, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["ISBN:0716731363","ISBN:0816017360","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem II (obsolete GO:0009771)","termid":"GO:0009771"}


id: PBO:0084545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the protein disulfide isomerase (PDI) family; interacts with and inhibits the chaperone activity of Cne1p; MPD1 overexpression in a pdi1 null mutant suppresses defects in Pdi1p functions such as carboxypeptidase Y maturation","termid":"PBO:0084545"}


id: MONDO:0003727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of animals.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific phobia","termid":"MONDO:0012000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"animal phobia","secondary_identifiers":["EFO:1001876","NCIT:C35273","MEDGEN:65440","UMLS:C0233711","DOID:600"],"synonyms":[{"name":"fear of animals","type":"exact"},{"name":"fear of animals (finding)","type":"exact"},{"name":"zoophobia","type":"exact"},{"name":"zoophobia (finding)","type":"exact"}],"termid":"MONDO:0003727","xrefs":{"Monarch":{"xref_id":"0003727"}}}


id: PBO:0079517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 1","termid":"PBO:0079517"}


id: PBO:0082455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase; glycoprotein that catalyzes the introduction of a C-5(6) double bond into episterol, a precursor in ergosterol biosynthesis; transcriptionally down-regulated when ergosterol is in excess; mutants are viable, but cannot grow on non-fermentable carbon sources; substrate of HRD ubiquitin ligase; mutation is functionally complemented by human SC5D","termid":"PBO:0082455"}


id: PBO:0064758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase C","termid":"PBO:0064758"}


id: MONDO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete la Crosse encephalitis (obsolete MONDO:0000246)","termid":"MONDO:0000246","xrefs":{"Monarch":{"xref_id":"0000246"}}}


id: MONDO:0007818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of decreased or absent presence or activity of signal transducer and activator of transcription 3 protein. Deficiency of this protein is associated with hyper-IgE syndrome.","definition_xrefs":["NCIT:C126342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete immune deficiency with skin involvement (obsolete MONDO:0019305)","termid":"MONDO:0019305"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE recurrent infection syndrome 1, autosomal dominant","secondary_identifiers":["DOID:3261","Orphanet:2314","SCTID:50926003","MESH:C567925","OMIM:147060","UMLS:C2936739","GARD:6800","OMIM:146840","MEDGEN:445391","MESH:C564135"],"synonyms":[{"name":"AD hyperimmunoglobulin E syndrome","type":"exact"},{"name":"AD-HIES","type":"exact"},{"name":"Buckley syndrome","type":"exact"},{"name":"HIES autosomal dominant","type":"exact"},{"name":"HIES, autosomal dominant","type":"exact"},{"name":"JOB syndrome","type":"exact"},{"name":"Job syndrome autosomal dominant","type":"exact"},{"name":"Job's syndrome","type":"exact"},{"name":"STAT3 deficiency","type":"exact"},{"name":"autosomal dominant HIES","type":"exact"},{"name":"autosomal dominant hyper IgE syndrome","type":"exact"},{"name":"autosomal dominant hyper-IgE syndrome","type":"exact"},{"name":"autosomal dominant hyperimmunoglobulin E syndrome","type":"exact"},{"name":"hyper Ig E syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"broad"},{"name":"hyper-IgE recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyper-IgE syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E recurrent infection syndrome, autosomal dominant","type":"exact"},{"name":"hyperimmunoglobulin E syndrome type 1","type":"exact"},{"name":"hyperimmunoglobulin E-recurrent infection syndrome","type":"broad"},{"name":"immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist","type":"exact"}],"termid":"MONDO:0007818","xrefs":{"Monarch":{"xref_id":"0007818"}}}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: MONDO:0017933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation is a mitochondrial oxidative phosphorylation disorder characterized by hypertrophic and dilated cardiomyopathy, failure to thrive, myopathy with generalized hypotonia and increased creatine kinase, developmental delay and/or regression with cerebral atrophy on brain MRI, renal manifestations including chronic renal failure, renal tubular acidosis and lactic acidosis. Additional clinical features include seizures and respiratory failure.","definition_xrefs":["Orphanet:324525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation","secondary_identifiers":["GARD:21442","MEDGEN:1650300","UMLS:C4749942"],"synonyms":[{"name":"hypertrophic cardiomyopathy and renal tubular disease due to mtDNA mutation","type":"exact"}],"termid":"MONDO:0017933","xrefs":{"Monarch":{"xref_id":"0017933"}}}


id: PBO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 8","termid":"PBO:0061287"}


id: GO:0099548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}


id: MONDO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Plasmacytoma is a localized mass of neoplastic monoclonal plasma cells that represents approximately 5% of all plasma cell neoplasms. There are two separate entities: primary plasmacytoma of the bone and extramedullary plasmacytoma of the soft tissues. Of the extramedullary plasmacytomas, 80% occur in the head and neck, usually in the upper respiratory tract. The median age at diagnosis is 50 years and the male to female ratio is 3:1. Long-term survival is possible following local radiotherapy, particularly for soft tissue presentations.","definition_xrefs":["Orphanet:86855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plasmacytoma","secondary_identifiers":["DOID:3721","ICDO:9731/3","EFO:0006738","ICD9:238.6","GARD:13446","MESH:D010954","MedDRA:10035484","MEDGEN:18506","SCTID:415112005","icd11.foundation:1811140613","NCIT:C9349","UMLS:C0032131"],"synonyms":[{"name":"anaplastic plasmacytoma","type":"related"},{"name":"anaplastic skeletal plasmacytoma (type)","type":"related"},{"name":"anaplastic solitary extramedullary plasmacytoma of the cecum (type)","type":"related"},{"name":"extramedullary anaplastic plasmacytoma (type)","type":"related"},{"name":"myeloma - solitary","type":"related"},{"name":"myeloma, solitary","type":"related"},{"name":"plasmacytoma","type":"exact"},{"name":"solitary myeloma","type":"related"},{"name":"solitary plasmacytoma","type":"narrow"}],"termid":"MONDO:0005615","xrefs":{"Monarch":{"xref_id":"0005615"}}}


id: GO:0044553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a biological quality in another organism. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of biological quality in another organism (obsolete GO:0044553)","synonyms":[{"name":"modulation of biological quality in other organism","type":"exact"},{"name":"regulation of biological quality in other organism","type":"exact"}],"termid":"GO:0044553"}


id: GO:0033449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"GUU codon-amino acid adaptor activity","synonyms":[{"name":"GTT codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033449"}


id: GO:0102063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (-)-beta-curcumene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-curcumene synthase activity (obsolete GO:0102063)","termid":"GO:0102063"}


id: PR:O43063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11599:SF4","OMA:SCHPO03572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.10c","secondary_identifiers":["UniProtKB:O43063"],"synonyms":[{"name":"Spom972h-PSMB6","type":"exact"}],"termid":"PR:O43063"}


id: GO:0032335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of activin secretion","termid":"GO:0032335"}


id: PR:Q09814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tgs1 gene.","definition_xrefs":["UniProtKB:Q09814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.15c","synonyms":[{"name":"Spom972h-tgs1","type":"exact"},{"name":"cap-specific guanine-N2 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snRNA/snoRNA cap hypermethylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09814"}


id: PBO:0073068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein","termid":"PBO:0073068"}


id: MONDO:1011018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxyglutaricacidemia, non-human animal","termid":"MONDO:1010244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, dog","secondary_identifiers":["OMIA:001371-9615"],"termid":"MONDO:1011018","xrefs":{"Monarch":{"xref_id":"1011018"}}}


id: GO:0000958
data:
  {"annotated_genes":["SJAG_02526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113476],"is_not":false,"summary":null,"term":"GO:0000958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA transcribed from the mitochondrial genome and occurring in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"},{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02526":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000958","terms_by_termid":{"GO:0000958":null}}


id: FYPO:0005109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:21518960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to chromatin at replication origin","synonyms":[{"name":"advanced protein localization to chromatin at replication origin","type":"exact"},{"name":"premature protein localisation to chromatin at replication origin","type":"exact"},{"name":"premature protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"premature protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0005109"}


id: PR:Q92383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mag1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.04c","synonyms":[{"name":"3-methyladenine DNA glycosidase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3MEA DNA glycosylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mag1","type":"exact"}],"termid":"PR:Q92383"}


id: GO:1902886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["GOC:di","GO_REF:0000059","PMID:23995839","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteasome-activating ATPase activity (obsolete GO:1902886)","synonyms":[{"name":"down regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasomal ATPase activity","type":"exact"},{"name":"down regulation of proteasome channel gating activity","type":"narrow"},{"name":"down regulation of proteasome channel opening activity","type":"narrow"},{"name":"down regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"down-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ATPase activity","type":"exact"},{"name":"down-regulation of proteasome channel gating activity","type":"narrow"},{"name":"down-regulation of proteasome channel opening activity","type":"narrow"},{"name":"down-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"downregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ATPase activity","type":"exact"},{"name":"downregulation of proteasome channel gating activity","type":"narrow"},{"name":"downregulation of proteasome channel opening activity","type":"narrow"},{"name":"downregulation of proteasome-activating ATPase activity","type":"exact"},{"name":"inhibition of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasomal ATPase activity","type":"narrow"},{"name":"inhibition of proteasome channel gating activity","type":"narrow"},{"name":"inhibition of proteasome channel opening activity","type":"narrow"},{"name":"inhibition of proteasome-activating ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"negative regulation of proteasomal ATPase activity","type":"exact"},{"name":"negative regulation of proteasome channel gating activity","type":"narrow"},{"name":"negative regulation of proteasome channel opening activity","type":"narrow"}],"termid":"GO:1902886"}


id: GO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex found on immature T cells consisting of a T cell receptor beta chain and the pre-TCR-alpha chain, along with additional signaling components including CD3 family members and additional signaling proteins.","definition_xrefs":["ISBN:0781735149","PMID:12220932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"pre-T cell receptor complex","synonyms":[{"name":"pre-T lymphocyte receptor complex","type":"exact"},{"name":"pre-T-cell receptor complex","type":"exact"},{"name":"pre-T-lymphocyte receptor complex","type":"exact"},{"name":"pre-TCR complex","type":"exact"}],"termid":"GO:0043384"}


id: FYPO:0004272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus is abnormal.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}


id: GO:0097030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a centromere-specific nucleosome, a form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["GOC:jp","PMID:21412236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome binding","termid":"GO:0031491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CENP-A containing nucleosome binding","synonyms":[{"name":"centromere-specific nucleosome binding","type":"related"},{"name":"centromeric nucleosome binding","type":"related"}],"termid":"GO:0097030"}


id: MONDO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete linear skin defects with multiple congenital anomalies (obsolete MONDO:0000198)","termid":"MONDO:0000198","xrefs":{"Monarch":{"xref_id":"0000198"}}}


id: PBO:0058650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6779","termid":"PBO:0058650"}


id: GO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud is generated and organized.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud morphogenesis","termid":"GO:0060675"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0012827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-added_during","termid":"PBO:0012827"}


id: FYPO:0007689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells can grow in a normally (i.e. as in wild type) polarized manner as in the presence of a polarity landmark. The landmark itself may be in a normal or abnormal location.","definition_xrefs":["PMID:21148300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell growth polarization","synonyms":[{"name":"normal cell growth polarisation","type":"exact"},{"name":"normal cell growth polarization during mitotic cell cycle","type":"related"},{"name":"normal cell growth polarization during vegetative growth","type":"exact"},{"name":"normal vegetative cell growth polarization","type":"exact"}],"termid":"FYPO:0007689"}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: GO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a fatty acid = S-adenosyl-L-homocysteine + a fatty acid methyl ester.","definition_xrefs":["EC:2.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"fatty acid O-methyltransferase activity","secondary_identifiers":["MetaCyc:FATTY-ACID-O-METHYLTRANSFERASE-RXN","RHEA:23012"],"synonyms":[{"name":"S-adenosyl-L-methionine:fatty-acid O-methyltransferase activity","type":"related"},{"name":"fatty acid methyltransferase activity","type":"related"},{"name":"fatty-acid O-methyltransferase activity","type":"exact"}],"termid":"GO:0030733"}


id: PR:P79005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator taz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.07c","synonyms":[{"name":"Spom972h-taz1","type":"exact"}],"termid":"PR:P79005"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: GO:0035205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lamellocyte differentiation","synonyms":[{"name":"activation of lamellocyte differentiation","type":"narrow"},{"name":"stimulation of lamellocyte differentiation","type":"narrow"},{"name":"up regulation of lamellocyte differentiation","type":"exact"},{"name":"up-regulation of lamellocyte differentiation","type":"exact"},{"name":"upregulation of lamellocyte differentiation","type":"exact"}],"termid":"GO:0035205"}


id: MONDO:1010795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the TNXB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, TNXB-related, dog","secondary_identifiers":["OMIA:002203-9615"],"synonyms":[{"name":"clEDS","type":"exact"}],"termid":"MONDO:1010795","xrefs":{"Monarch":{"xref_id":"1010795"}}}


id: PBO:0085934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; protein identified via enrichment-based proteogenomics; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085934"}


id: GO:1900980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenazine biosynthetic process","synonyms":[{"name":"regulation of acridizine biosynthesis","type":"related"},{"name":"regulation of acridizine biosynthetic process","type":"related"},{"name":"regulation of azophenylene biosynthesis","type":"related"},{"name":"regulation of azophenylene biosynthetic process","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900980"}


id: MONDO:0100083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This is an autosomal dominant disorder caused by mutations in the RUNX1 gene and is characterized by mild to moderate thrombocytopenia, platelet functional and/or ultrastructural defects and a predisposition to hematologic malignancies, most often AML and MDS, and less frequently T-ALL.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombocytopenia and hematologic cancer predisposition syndrome","termid":"MONDO:0011071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1","secondary_identifiers":["NORD:1943","GARD:15329","NANDO:2200662","NCIT:C151903","UMLS:C1832388","OMIM:601399","MEDGEN:321945"],"synonyms":[{"name":"FPD/AML syndrome","type":"exact"},{"name":"FPDMM","type":"related"},{"name":"FPS/AML syndrome","type":"exact"},{"name":"Familial Platelet Disorder with Associated Myeloid Malignancy","type":"exact"},{"name":"asprin-like platelet disorder","type":"related"},{"name":"familial platelet disorder with associated myeloid malignancy","type":"exact"},{"name":"familial platelet syndrome with predisposition to acute myelogenous leukaemia","type":"exact"},{"name":"familial platelet syndrome with predisposition to acute myelogenous leukemia","type":"exact"},{"name":"familial thrombocytopenia with propensity to acute myelogenous leukaemia","type":"related"},{"name":"familial thrombocytopenia with propensity to acute myelogenous leukemia","type":"related"},{"name":"hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1","type":"exact"},{"name":"platelet disorder, aspirin-like","type":"related"},{"name":"platelet disorder, familial, with associated myeloid malignancy","type":"related"},{"name":"thrombocytopenia, familial, with propensity to acute myelogenous leukaemia","type":"related"},{"name":"thrombocytopenia, familial, with propensity to acute myelogenous leukemia","type":"related"}],"termid":"MONDO:0100083","xrefs":{"Monarch":{"xref_id":"0100083"}}}


id: MONDO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute pancreatitis (obsolete MONDO:0002458)","termid":"MONDO:0002458","xrefs":{"Monarch":{"xref_id":"0002458"}}}


id: PBO:0076502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2, pseudogene","termid":"PBO:0076502"}


id: PBO:0067175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 231, pseudogene","termid":"PBO:0067175"}


id: GO:0050131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-methyl-L-amino acid + H2O + O2 = an L-amino acid + formaldehyde + H2O2.","definition_xrefs":["EC:1.5.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-methyl-L-amino-acid oxidase activity","secondary_identifiers":["MetaCyc:N-METHYL-L-AMINO-ACID-OXIDASE-RXN","RHEA:11472"],"synonyms":[{"name":"N-methyl-L-amino-acid:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N-methylamino acid oxidase activity","type":"related"}],"termid":"GO:0050131"}


id: MONDO:0009817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the OSTM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile osteopetrosis with neuroaxonal dysplasia","termid":"MONDO:0010866"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 5","secondary_identifiers":["MESH:C566883","DOID:0110939","OMIM:259720","UMLS:C1968603","MEDGEN:409627","GARD:4153"],"synonyms":[{"name":"OPTB5","type":"exact"},{"name":"OSTM1 osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteopetrosis 5","type":"exact"},{"name":"autosomal recessive osteopetrosis type 5","type":"exact"},{"name":"infantile malignant osteopetrosis 3","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in OSTM1","type":"exact"},{"name":"osteopetrosis autosomal recessive 5","type":"related"},{"name":"osteopetrosis infantile malignant 3","type":"related"},{"name":"osteopetrosis, autosomal recessive 5","type":"related"},{"name":"osteopetrosis, autosomal recessive type 5","type":"exact"},{"name":"osteopetrosis, infantile malignant 3","type":"related"}],"termid":"MONDO:0009817","xrefs":{"Monarch":{"xref_id":"0009817"}}}


id: GO:0033484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: PBO:0041042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3","termid":"PBO:0041042"}


id: GO:0031110
data:
  {"annotated_genes":["SJAG_04312","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72474],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[101376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: PBO:0054068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1415","termid":"PBO:0054068"}


id: PBO:0068911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 154, pseudogene","termid":"PBO:0068911"}


id: MONDO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pigmentation defects-palmoplantar keratoderma-skin carcinoma syndrome","secondary_identifiers":["GARD:17776","OMIM:618373","Orphanet:447961","MEDGEN:1807813","UMLS:C5681108"],"synonyms":[{"name":"CANCER, ALOPECIA, PIGMENT DYSCRASIA, ONYCHODYSTROPHY, AND KERATODERMA","type":"related"},{"name":"CAPOK","type":"related"}],"termid":"MONDO:0018657","xrefs":{"Monarch":{"xref_id":"0018657"}}}


id: GO:0061497
data:
  {"annotated_genes":["SJAG_02609","SJAG_07018","SJAG_05196","SJAG_02332","SJAG_03835","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100502,102334,108411,109171,110153,111010],"is_not":false,"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner plaque of spindle pole body","termid":"GO:0005822"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"inner plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061497","terms_by_termid":{"GO:0061497":null}}


id: PBO:0056377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK8IP3 antisense RNA 1","termid":"PBO:0056377"}


id: GO:0052486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the symbiont organism, the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont innate immunity (obsolete GO:0052486)","synonyms":[{"name":"negative regulation by organism of symbiont innate immunity","type":"exact"},{"name":"negative regulation of symbiont innate immune response","type":"exact"}],"termid":"GO:0052486"}


id: PBO:0070043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1340, pseudogene","termid":"PBO:0070043"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0071647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 11","termid":"PBO:0071647"}


id: FYPO:0001980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is normal (i.e. indistinguishable from wild type). RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["PomBase:mah","GO:0006396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA processing","synonyms":[{"name":"normal RNA processing during mitotic cell cycle","type":"related"},{"name":"normal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001980"}


id: GO:0001002
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71560],"is_not":false,"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a type 1 promoter that controls transcription by RNA polymerase III. Type 1 promoters are found in 5S rRNA genes, downstream of the transcription start site within the sequence of the mature RNA, and require TFIIIA for recognition.","definition_xrefs":["PMID:12381659","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"},{"relation_name":"is_a","term_name":"5S rDNA binding","termid":"GO:0080084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001030"],"synonyms":[{"name":"RNA polymerase III type 1 promoter DNA binding","type":"related"}],"termid":"GO:0001002","terms_by_termid":{"GO:0001002":null}}


id: GO:2000875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glyoxylate cycle.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of glyoxylate cycle","termid":"GO:2000874"},{"relation_name":"negatively_regulates","term_name":"glyoxylate cycle","termid":"GO:0006097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glyoxylate cycle","synonyms":[{"name":"negative regulation of glyoxylate bypass","type":"exact"}],"termid":"GO:2000875"}


id: PBO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 23","termid":"PBO:0071417"}


id: FYPO:0004410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tetraplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on tetraplatin","synonyms":[{"name":"normal cell population growth in presence of tetraplatin","type":"exact"},{"name":"normal cell population growth on tetraplatin","type":"exact"},{"name":"normal cellular response to tetraplatin","type":"related"},{"name":"normal vegetative cell population growth on tetraplatin","type":"exact"}],"termid":"FYPO:0004410"}


id: PBO:0074142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B2","termid":"PBO:0074142"}


id: GO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol storage","synonyms":[{"name":"cholesterol sequestration","type":"narrow"},{"name":"sequestration of cholesterol","type":"narrow"}],"termid":"GO:0010878"}


id: PBO:0078392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 2-1","termid":"PBO:0078392"}


id: PBO:0079342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 26, pseudogene","termid":"PBO:0079342"}


id: GO:0008901
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114363],"is_not":false,"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2.","definition_xrefs":["EC:1.12.7.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor","termid":"GO:0016699"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ferredoxin hydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016951","MetaCyc:HYDROG-RXN","RHEA:17445","GO:0016948","GO:0016949","GO:0016950"],"synonyms":[{"name":"H(2) oxidizing hydrogenase activity","type":"broad"},{"name":"H(2) producing hydrogenase activity","type":"broad"},{"name":"H2 oxidizing hydrogenase","type":"broad"},{"name":"H2 producing hydrogenase","type":"broad"},{"name":"Ni-Fe hydrogenase activity","type":"narrow"},{"name":"Ni-Fe-Se hydrogenase activity","type":"narrow"},{"name":"[Fe] hydrogenase activity","type":"exact"},{"name":"[Fe] hydrogenase gamma","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:ferredoxin oxidoreductase activity","type":"exact"},{"name":"hydrogenase (ferredoxin) activity","type":"related"},{"name":"hydrogenase I","type":"related"},{"name":"hydrogenase II","type":"related"},{"name":"hydrogenase activity","type":"broad"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"iron hydrogenase activity","type":"narrow"},{"name":"iron-only hydrogenase activity","type":"narrow"},{"name":"nickel hydrogenase activity","type":"narrow"},{"name":"nickel-iron hydrogenase activity","type":"narrow"},{"name":"nickel-iron-selenium hydrogenase activity","type":"narrow"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0008901","terms_by_termid":{"GO:0008901":null}}


id: GO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal alanine of proteins.","definition_xrefs":["RESID:AA0062","RESID:AA0061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: MONDO:0012459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 6","secondary_identifiers":["UMLS:C1853226","MEDGEN:377855","OMIM:610262"],"synonyms":[{"name":"Hyt6","type":"related"},{"name":"hypertension, essential, kidney function-related","type":"related"},{"name":"hypertension, essential, susceptibility to, 6","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0012459","xrefs":{"Monarch":{"xref_id":"0012459"}}}


id: MONDO:0975830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with myalgia, increased serum creatine kinase, and with or without episodic rhabdomyolysis 2","secondary_identifiers":["OMIM:620971"],"termid":"MONDO:0975830","xrefs":{"Monarch":{"xref_id":"0975830"}}}


id: PBO:0113063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA3b histone acetyltransferase complex; binds to Pol II and stimulates elongation; regulates interaction between NuA3b and H3K36me3 at transcribed regions of genes; contains PWWP domain; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia; extensive sequence similarity (~25% identity; ~39% similarity) to the N-terminal region of human NDF","termid":"PBO:0113063"}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6667031","PMID:6087882","PMID:6259174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: PBO:0079990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 28","termid":"PBO:0079990"}


id: PBO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin","termid":"PBO:0043368"}


id: FYPO:0001272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA becomes spread into an indistinct mass along much of the length of the mitotic spindle.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA","synonyms":[{"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA during vegetative growth","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid separation, with smeared DNA","type":"related"},{"name":"incomplete, unequal sister chromatid segregation, with smeared DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001272"}


id: MONDO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myophosphorylase deficiency (McArdle's disease), or glycogen storage disease type 5 (GSD5), is a severe form of glycogen storage disease characterized by exercise intolerance.","definition_xrefs":["Orphanet:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease V","secondary_identifiers":["GARD:6528","OMIM:232600","NCIT:C84738","MedDRA:10018462","NANDO:1200828","MESH:D006012","UMLS:C0017924","NANDO:2200541","DOID:2746","SCTID:55912009","MEDGEN:5341"],"synonyms":[{"name":"GSD 5","type":"related"},{"name":"GSD due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 5","type":"exact"},{"name":"GSD type V","type":"exact"},{"name":"GSD5","type":"related"},{"name":"McArdle disease","type":"exact"},{"name":"McArdle type glycogen storage disease","type":"related"},{"name":"McArdle's disease","type":"exact"},{"name":"Mcardle disease","type":"exact"},{"name":"PYGM glycogen storage disease","type":"exact"},{"name":"Pygm deficiency","type":"related"},{"name":"glycogen storage disease 5","type":"related"},{"name":"glycogen storage disease V","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGM","type":"exact"},{"name":"glycogen storage disease due to muscle glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 5","type":"exact"},{"name":"glycogen storage disease type V","type":"exact"},{"name":"glycogen storage disease, type V","type":"exact"},{"name":"glycogenosis due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 5","type":"exact"},{"name":"glycogenosis type V","type":"exact"},{"name":"muscle glycogen phosphorylase deficiency","type":"related"},{"name":"myophosphorylase deficiency","type":"exact"}],"termid":"MONDO:0009293","xrefs":{"Monarch":{"xref_id":"0009293"}}}


id: GO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heavy metal ion(in) + ATP + H2O = heavy metal ion(out) + ADP + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal-exporting ATPase activity (obsolete GO:0004007)","synonyms":[{"name":"heavy metal-exporting ATPase activity","type":"exact"}],"termid":"GO:0004007"}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: MONDO:1011727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G deficiency, non-human animal","secondary_identifiers":["OMIA:000554"],"termid":"MONDO:1011727","xrefs":{"Monarch":{"xref_id":"1011727"}}}


id: MONDO:0024279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-granulomatous or granulomatous chronic inflammation of the endometrium. Causes include sexually transmitted pathogens and gynecological procedures. Patients may present with irregular bleeding.","definition_xrefs":["NCIT:C102820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometritis","termid":"MONDO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic endometritis","secondary_identifiers":["SCTID:63922003","MEDGEN:536766","icd11.foundation:440849195","UMLS:C0238104"],"synonyms":[{"name":"chronic endometritis","type":"exact"},{"name":"endometritis, chronic","type":"exact"}],"termid":"MONDO:0024279","xrefs":{"Monarch":{"xref_id":"0024279"}}}


id: FYPO:0001168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ATPase activity","termid":"FYPO:0001167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased ATPase activity","synonyms":[{"name":"reduced ATPase activity","type":"exact"}],"termid":"FYPO:0001168"}


id: FYPO:0003283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal copper import","synonyms":[{"name":"abnormal cellular copper import","type":"exact"},{"name":"abnormal copper cation import","type":"exact"},{"name":"abnormal copper import during mitotic cell cycle","type":"related"},{"name":"abnormal copper import during vegetative growth","type":"exact"},{"name":"abnormal copper import into cell","type":"exact"},{"name":"abnormal copper ion import","type":"exact"},{"name":"abnormal copper ion import across plasma membrane","type":"exact"}],"termid":"FYPO:0003283"}


id: GO:0008685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP.","definition_xrefs":["RHEA:23864","EC:4.6.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R05637","MetaCyc:RXN0-302"],"synonyms":[{"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol CMP-lyase (cyclizing)","type":"related"},{"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol CMP-lyase (cyclizing; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate-forming)","type":"related"},{"name":"MECDP-synthase activity","type":"related"},{"name":"MECP synthase activity","type":"exact"}],"termid":"GO:0008685"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: GO:0005785
data:
  {"annotated_genes":["SJAG_00360","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70546,93755],"is_not":false,"summary":null,"term":"GO:0005785"}]},"cv_name":"cellular_component","definition":"A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0032991","GO:0005789"],"is_obsolete":false,"name":"signal recognition particle receptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"SR complex","type":"exact"},{"name":"docking protein complex","type":"related"}],"termid":"GO:0005785","terms_by_termid":{"GO:0005785":null}}


id: MONDO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by by truncating mutations in the C-propeptide of COL2A1. Like other type II collagen disorders it is characterized by short stature, platyspondyly and epiphyseal dysplasia. A distinguishing feature is the presence of brachydactyly with a prominent first toe.","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloperipheral dysplasia","secondary_identifiers":["DOID:0112195","NANDO:2201351","GARD:4994","Orphanet:1856","NCIT:C135088","SCTID:702339001","OMIM:271700","UMLS:C0796173","MESH:C535799","MEDGEN:163223","ICD9:758.89"],"synonyms":[{"name":"spondyloperipheral dysplasia","type":"exact"},{"name":"spondyloperipheral dysplasia with short ulna","type":"related"},{"name":"spondyloperipheral dysplasia-short ulna syndrome","type":"exact"}],"termid":"MONDO:0010078","xrefs":{"Monarch":{"xref_id":"0010078"}}}


id: PBO:0074690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 69","termid":"PBO:0074690"}


id: MONDO:0958268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic congenital bronchial atresia","secondary_identifiers":["MEDGEN:1853136","Orphanet:649010","UMLS:C5816738"],"termid":"MONDO:0958268","xrefs":{"Monarch":{"xref_id":"0958268"}}}


id: PBO:0056486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 3","termid":"PBO:0056486"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: PBO:0055158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2577","termid":"PBO:0055158"}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: GO:0051383
data:
  {"annotated_genes":["SJAG_04638","SJAG_03048","SJAG_03220","SJAG_00794","SJAG_05321","SJAG_02465","SJAG_02513","SJAG_04177","SJAG_01374","SJAG_01837","SJAG_03217","SJAG_00718","SJAG_02664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77490,90416],"is_not":false,"summary":null,"term":"GO:0051383"},{"annotations":[105020,90245,67550,81681,57291,65608,68006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051382"},{"annotations":[117560],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[116279,101903,89114],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:jl","GOC:dph","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00794":null,"SJAG_01374":null,"SJAG_01837":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_04177":null,"SJAG_04638":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinetochore organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"kinetochore organisation","type":"exact"},{"name":"kinetochore organization and biogenesis","type":"related"}],"termid":"GO:0051383","terms_by_termid":{"GO:0051382":null,"GO:0051383":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: MONDO:0100571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder and/or exudative vitreoretinopathy caused by a monoallelic variant in the CTNNB1 gene. Variants in CTNNB1 are related to a neurodevelopmental condition with a broad spectrum of presentations ranging from isolated vitreoretinopathy to a complex neurodevelopmental disorder with mild to severe intellectual disability, microcephaly, spasticity, autism spectrum disorder, and visual defects, including retinal detachment, and abnormal retinal vascularization.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy","termid":"MONDO:0100571","xrefs":{"Monarch":{"xref_id":"0100571"}}}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: GO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + 1-O-trans-cinnamoyl-beta-D-glucopyranose = beta-D-glucose + alkyl cinnamate.","definition_xrefs":["EC:2.3.1.152","MetaCyc:2.3.1.152-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"alcohol O-cinnamoyltransferase activity","secondary_identifiers":["RHEA:23524"],"synonyms":[{"name":"1-O-trans-cinnamoyl-beta-D-glucopyranose:alcohol O-cinnamoyltransferase activity","type":"related"}],"termid":"GO:0047182"}


id: PATO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lingually","termid":"PATO:0005019"}


id: FYPO:0005464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but then remains there for a longer or shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal maintenance of protein location at cell tip during vegetative growth","synonyms":[{"name":"abnormal maintenance of protein localization at cell tip during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell end during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell tip during mitotic cell cycle","type":"related"},{"name":"unstable protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005464"}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: GO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that is divided into two or more physically separate molecules of nucleic acid and packaged into a single virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete segmented viral genome (obsolete GO:0019017)","termid":"GO:0019017"}


id: GO:0031973
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chromoplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chromoplast envelope","termid":"GO:0031898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast intermembrane space","synonyms":[{"name":"chromoplast envelope lumen","type":"exact"}],"termid":"GO:0031973"}


id: PBO:0083888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes directly to nucleocytoplasmic transport; involved in regulation of transcription and mitosis; induces membrane tubulation, which may contribute to nuclear pore assembly; NUP53 has a paralog, ASM4, that arose from the whole genome duplication","termid":"PBO:0083888"}


id: MONDO:0019998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroduodenal malformation (obsolete MONDO:0019998)","secondary_identifiers":["Orphanet:97944"],"termid":"MONDO:0019998","xrefs":{"Monarch":{"xref_id":"0019998"}}}


id: PR:O13784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S24-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.06","synonyms":[{"name":"Spom972h-rps2401","type":"exact"}],"termid":"PR:O13784"}


id: GO:0047563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + AH(2) + O2 = 2,3-dihydroxybenzoate + A + H2O.","definition_xrefs":["EC:1.14.99.23","RHEA:14193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxybenzoate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01508","MetaCyc:3-HYDROXYBENZOATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"3-HBA-2-hydroxylase activity","type":"related"},{"name":"3-hydroxybenzoate 2-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0047563"}


id: MONDO:0019840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-pectoro-renal field defect is a very rare association of a Poland anomaly, that is characterized by unilateral absence or hypoplasia of the pectoralis major muscle (most frequently involving the sternocostal head) and a variable degree of ipsilateral hand anomalies (including symbrachydactyly, brachydactyly, absent thumb and hypoplastic fingers), combined with a genito-urinary anomaly. Associated genito-urinary anomalies reported include renal hypoplasia or agenesis, duplex collecting system, ureteropelvic junction obstruction, hypospadias and undescended testicles.","definition_xrefs":["Orphanet:956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic breast hypoplasia/aplasia","termid":"MONDO:0015856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acropectororenal dysplasia","secondary_identifiers":["GARD:511","SCTID:720413004"],"synonyms":[{"name":"acro-pectoro-renal field defect","type":"related"},{"name":"brachydactyly, absent pectoral muscles and agenesis/hypoplasia of kidneys","type":"related"}],"termid":"MONDO:0019840","xrefs":{"Monarch":{"xref_id":"0019840"}}}


id: GO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurotensin receptor binding","synonyms":[{"name":"neurotensin receptor ligand","type":"narrow"}],"termid":"GO:0031846"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0087676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; recruits E3 subunit (Lpd1p) to the E1-E2 (Kgd1p, Kgd2p) core; exists in two forms derived from a single mRNA translated from two alternative start sites; has similarity to human mitochondrial ribosomal protein MRP-S36","termid":"PBO:0087676"}


id: PBO:0082121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; required for establishment of sister chromatid cohesion; acetylates Mps3p to regulate nuclear organization; modifies Smc3p at replication forks and Mcd1p in response to dsDNA breaks; phosphorylated by three kinases (Cdc28p, Cdc7p, Mck1p) to generate pair of phosphates spaced precisely for recognition by ubiquitin ligase SCF-Cdc4; mutations in human homolog ESCO2 cause Roberts syndrome; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0082121"}


id: PBO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive orphan 1","termid":"PBO:0004803"}


id: MONDO:1012338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, goat","secondary_identifiers":["OMIA:001235-9925"],"termid":"MONDO:1012338","xrefs":{"Monarch":{"xref_id":"1012338"}}}


id: PR:Q9HFE8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.03c","synonyms":[{"name":"Spom972h-tra1","type":"exact"}],"termid":"PR:Q9HFE8"}


id: PBO:0068764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1","termid":"PBO:0068764"}


id: FYPO:0002805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which sodium ion import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal sodium import","synonyms":[{"name":"normal sodium import across plasma membrane","type":"exact"},{"name":"normal sodium import during mitotic cell cycle","type":"related"},{"name":"normal sodium import during vegetative growth","type":"exact"},{"name":"normal sodium import into cell","type":"exact"},{"name":"normal sodium ion import into cell","type":"exact"},{"name":"normal sodium uptake","type":"exact"}],"termid":"FYPO:0002805"}


id: GO:0000038
data:
  {"annotated_genes":["SJAG_01458","SJAG_01356","SJAG_02717","SJAG_01300","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102999,75435,79510,74383,91423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"very long chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolic process","type":"exact"},{"name":"very-long-chain fatty acid metabolism","type":"exact"}],"termid":"GO:0000038","terms_by_termid":{"GO:0042761":null}}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: PBO:0056011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056011"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: GO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichol-phosphate + UDP-D-xylose = dolichyl D-xylosyl phosphate + UDP.","definition_xrefs":["EC:2.4.2.32","MetaCyc:2.4.2.32-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"dolichyl-phosphate D-xylosyltransferase activity","secondary_identifiers":["RHEA:15361"],"synonyms":[{"name":"UDP-D-xylose:dolichyl-phosphate D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047283"}


id: PBO:0088300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold","termid":"PBO:0088300"}


id: PBO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartylglucosaminidase","termid":"PBO:0039021"}


id: GO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of trophectoderm cells.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cellular morphogenesis","synonyms":[{"name":"trophectoderm cellular morphogenesis","type":"exact"}],"termid":"GO:0001831"}


id: PBO:0031428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glycerol_dehydrogenase_activity","termid":"PBO:0031428"}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: GO:0021710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar stellate cell. Differentiation includes the processes involved in commitment of a neuroblast to a cerebellar stellate cell fate. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:cls","GOC:dgh","PMID:15157725","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar molecular layer formation","termid":"GO:0021688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar stellate cell differentiation","termid":"GO:0021710"}


id: PBO:0080613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 47","termid":"PBO:0080613"}


id: GO:0007274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to a muscle, across a synapse.","definition_xrefs":["GOC:jl","GOC:dos","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuromuscular synaptic transmission","termid":"GO:0007274"}


id: PBO:0066331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN3 antisense RNA","termid":"PBO:0066331"}


id: GO:0097340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of an inactive cysteine-type endopeptidase.","definition_xrefs":["GOC:mtg_apoptosis","PMID:20383739"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of cysteine-type endopeptidase activity (obsolete GO:0097340)","synonyms":[{"name":"inhibition of caspase activity","type":"narrow"},{"name":"prevention of caspase activity","type":"narrow"},{"name":"prevention of cysteine-type endopeptidase activity","type":"exact"}],"termid":"GO:0097340"}


id: GO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H+ = CO2 + propanoyl-CoA or (2S)-ethylmalonyl-CoA + H+ = butanoyl-CoA + CO2.","definition_xrefs":["PMID:22016388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"methyl/ethyl malonyl-CoA decarboxylase activity","secondary_identifiers":["MetaCyc:METHYLMALONYL-COA-DECARBOXYLASE-RXN"],"synonyms":[{"name":"(S)-2-methyl-3-oxopropanoyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase (propanoyl-CoA-forming)","type":"narrow"},{"name":"(S)-methylmalonyl-CoA carboxy-lyase activity","type":"narrow"},{"name":"ethylmalonyl-CoA decarboxylase activity","type":"narrow"},{"name":"methylmalonyl-coenzyme A decarboxylase activity","type":"narrow"}],"termid":"GO:0004492"}


id: GO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the intermediate mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"intermediate mesoderm morphogenesis","termid":"GO:0048390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesoderm structural organization","synonyms":[{"name":"intermediate mesoderm structural organisation","type":"exact"}],"termid":"GO:0048402"}


id: GO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance metabolic process (obsolete GO:0071704)","synonyms":[{"name":"organic molecular entity metabolic process","type":"exact"},{"name":"organic molecular entity metabolism","type":"exact"},{"name":"organic substance metabolism","type":"exact"}],"termid":"GO:0071704"}


id: MONDO:0010560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked cleft palate and ankyloglossia is a rare, genetic developmental defect during embryogenesis syndrome characterized by the association of complete, partial or submucous cleft palate and ankyloglossia. Patients may also present abnormal uvula (e.g. absent, bifid, shortened or laterally deviated), short lingual frenulum and dental anomalies (e.g. buccal crossbite, absent and/or misshapen teeth). Digital abnormalities, such as mild clinodactyly and/or syndactyly, have also been reported.","definition_xrefs":["Orphanet:324601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate with or without ankyloglossia, X-linked","secondary_identifiers":["SCTID:766761000","GARD:1394","MESH:C536426","OMIM:303400","UMLS:C1844830","DOID:0060613","MEDGEN:375520"],"synonyms":[{"name":"CPX","type":"related"},{"name":"X-linked cleft palate","type":"related"},{"name":"X-linked cleft palate and ankyloglossia","type":"exact"},{"name":"cleft palate X-linked","type":"related"},{"name":"cleft palate with ankyloglossia","type":"exact"},{"name":"cleft palate with or without ankyloglossia, X-linked","type":"exact"},{"name":"cleft palate, X-linked","type":"related"}],"termid":"MONDO:0010560","xrefs":{"Monarch":{"xref_id":"0010560"}}}


id: MONDO:0022800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease or disorder in which the cause of the disease is a mutation in the COL2A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 collagenopathy","secondary_identifiers":["Orphanet:93421","UMLS:C2931073","MESH:C535964","GARD:19186","MEDGEN:419326","NANDO:2201016","HGNC:2200"],"synonyms":[{"name":"COL2A1","type":"related"},{"name":"COL2A1 disease or disorder","type":"exact"},{"name":"cartilage collagen","type":"related"},{"name":"collagen II","type":"related"},{"name":"collagenopathy type 2 alpha 1","type":"exact"},{"name":"disease or disorder caused by mutation in COL2A1","type":"exact"}],"termid":"MONDO:0022800","xrefs":{"Monarch":{"xref_id":"0022800"}}}


id: PBO:0059318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 1","termid":"PBO:0059318"}


id: MONDO:0011800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 4","secondary_identifiers":["OMIM:607248","UMLS:C2750944","MEDGEN:416425"],"synonyms":[{"name":"GLM4","type":"exact"},{"name":"glioma susceptibility 4","type":"exact"}],"termid":"MONDO:0011800","xrefs":{"Monarch":{"xref_id":"0011800"}}}


id: GO:0005770
data:
  {"annotated_genes":["SJAG_03131","SJAG_01981","SJAG_00173","SJAG_04359","SJAG_02432","SJAG_04349","SJAG_00416","SJAG_00380","SJAG_04024","SJAG_01367","SJAG_01088","SJAG_03892","SJAG_03848","SJAG_01488","SJAG_03347","SJAG_04023","SJAG_05210","SJAG_04513","SJAG_02429","SJAG_00287","SJAG_01324","SJAG_03783","SJAG_01242","SJAG_02100","SJAG_03137","SJAG_04552","SJAG_04616","SJAG_03976","SJAG_04047","SJAG_01039","SJAG_03072","SJAG_04489","SJAG_02049","SJAG_00204","SJAG_05207","SJAG_04643","SJAG_00181","SJAG_00900","SJAG_01379","SJAG_07012","SJAG_01309","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72452,72773,72990,73307,73529,76433,76621,78958,79059,81797,81834,98372,99223,103589,104625,108246,109207,110838,117157],"is_not":false,"summary":null,"term":"GO:0005770"},{"annotations":[97140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031906"},{"annotations":[91477,99019,100600,87573,77878,97167,80252],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031902"},{"annotations":[90467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035658"},{"annotations":[71889,72785,118793,77997,72459,81027,105300,114044,77572,112896,77755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005771"},{"annotations":[63062,118795,60859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090702","PMID:11964142","PMID:2557062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00287":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01039":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01367":null,"SJAG_01379":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02432":null,"SJAG_02516":null,"SJAG_03072":null,"SJAG_03131":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04349":null,"SJAG_04359":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04552":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"late endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"synonyms":[{"name":"PVC","type":"broad"},{"name":"prevacuolar compartment","type":"exact"}],"termid":"GO:0005770","terms_by_termid":{"GO:0005770":null,"GO:0005771":null,"GO:0031902":null,"GO:0031906":null,"GO:0032585":null,"GO:0035658":null}}


id: GO:1905095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:25084135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein A-I-mediated signaling pathway","termid":"GO:1905094"},{"relation_name":"negatively_regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"down regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"down-regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signaling pathway","type":"exact"},{"name":"downregulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"},{"name":"inhibition of apolipoprotein A-I-mediated signaling pathway","type":"narrow"},{"name":"inhibition of apolipoprotein A-I-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905095"}


