# terms

id: GO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial (indirect) attachment of a synaptic vesicle membrane to the presynaptic active zone membrane, mediated by proteins protruding from the membrane and proteins of the presynaptic active zone cytoplasmic component. Synaptic vesicle tethering is the first step in this process.","definition_xrefs":["PMID:15217342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140056","GO:0023052","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle docking","synonyms":[{"name":"synaptic vesicle docking during exocytosis","type":"related"},{"name":"synaptic vesicle docking involved in exocytosis","type":"exact"}],"termid":"GO:0016081"}


id: PBO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_entry_into_G0","termid":"PBO:0031774"}


id: PBO:0066531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 6","termid":"PBO:0066531"}


id: MONDO:0015960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic developmental defect during embryogenesis (obsolete MONDO:0015960)","secondary_identifiers":["Orphanet:183530"],"termid":"MONDO:0015960","xrefs":{"Monarch":{"xref_id":"0015960"}}}


id: FYPO:0006578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type). The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"normal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006578"}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-13769","RHEA:34467"],"termid":"GO:0102412"}


id: SO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of synthetic nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_oligo","synonyms":[{"name":"synthetic oligo","type":"exact"}],"termid":"SO:0001247"}


id: MOD:00557
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:15541752","Unimod:206","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:00557"}


id: MONDO:0044884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma that affects the tonsil and the bulk of the tumor is in this anatomic area. The majority of cases are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C5918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"spleen cancer","termid":"MONDO:0005966"},{"relation_name":"is_a","term_name":"tonsil cancer","termid":"MONDO:0006998"},{"relation_name":"is_a","term_name":"MALT lymphoma","termid":"MONDO:0007650"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"tonsillar lymphoma","secondary_identifiers":["UMLS:C1336765","MEDGEN:234432"],"synonyms":[{"name":"Primary tonsillar lymphoma","type":"exact"},{"name":"lymphoma of the tonsil","type":"exact"},{"name":"lymphoma of tonsil","type":"exact"},{"name":"tonsil lymphoma","type":"exact"},{"name":"tonsillar lymphoma","type":"exact"}],"termid":"MONDO:0044884","xrefs":{"Monarch":{"xref_id":"0044884"}}}


id: PBO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.11.-","termid":"PBO:0001176"}


id: PBO:0066100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras related dexamethasone induced 1","termid":"PBO:0066100"}


id: GO:0032794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTPase activating protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"GTPase activating protein binding","synonyms":[{"name":"GAP binding","type":"exact"}],"termid":"GO:0032794"}


id: GO:1902074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","GOC:TermGenie","PMID:16666921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt","synonyms":[{"name":"response to salinity","type":"narrow"}],"termid":"GO:1902074"}


id: PBO:0053363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 272","termid":"PBO:0053363"}


id: PR:Q10308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6C3.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 43 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.05","synonyms":[{"name":"Spom972h-SPAC6C3.05","type":"exact"}],"termid":"PR:Q10308"}


id: PBO:0018072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily protein","termid":"PBO:0018072"}


id: PBO:0059557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1A","termid":"PBO:0059557"}


id: PBO:0062720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily R member 1 pseudogene","termid":"PBO:0062720"}


id: PBO:0053104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 3","termid":"PBO:0053104"}


id: MONDO:0014571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","secondary_identifiers":["OMIM:616289","MEDGEN:898858","DOID:0111442","GARD:18199","UMLS:C4225384"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: PBO:0074648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 38","termid":"PBO:0074648"}


id: PBO:0028886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_splicing","termid":"PBO:0028886"}


id: PR:Q9UUJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A propionyl-CoA:succinate CoA transferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.09c","secondary_identifiers":["UniProtKB:Q9UUJ9"],"synonyms":[{"name":"Spom972h-scpC","type":"exact"},{"name":"acetyl-CoA acylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acetyl-CoA deacylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ9"}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: PBO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDNF antisense RNA 1","termid":"PBO:0060677"}


id: PBO:0030310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_germinating_spore","termid":"PBO:0030310"}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: MONDO:0012855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the ARL13B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 8","secondary_identifiers":["GARD:15550","DOID:0111003","MEDGEN:436772","OMIM:612291","UMLS:C2676771","MESH:C567358"],"synonyms":[{"name":"ARL13B Joubert syndrome","type":"exact"},{"name":"JBTS8","type":"exact"},{"name":"Joubert syndrome 8","type":"exact"},{"name":"Joubert syndrome caused by mutation in ARL13B","type":"exact"},{"name":"Joubert syndrome type 8","type":"exact"}],"termid":"MONDO:0012855","xrefs":{"Monarch":{"xref_id":"0012855"}}}


id: PBO:0090608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase Xks1","termid":"PBO:0090608"}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: PBO:0067406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 516, pseudogene","termid":"PBO:0067406"}


id: PBO:0078979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 5-1","termid":"PBO:0078979"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:dph","PMID:24703693"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


id: PBO:0085802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; copurifies with late Golgi vesicles containing the v-SNARE Tlg2p; PTM1 has a paralog, YHL017W, that arose from the whole genome duplication","termid":"PBO:0085802"}


id: SO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide binding motif is a short (up to 20 amino acids) polypeptide region of biological interest that contains one or more amino acids experimentally shown to bind to a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_binding_motif","synonyms":[{"name":"binding","type":"related"},{"name":"polypeptide binding motif","type":"exact"}],"termid":"SO:0100018"}


id: MONDO:0975874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies, absent speech and ambulation, and brain abnormalities","secondary_identifiers":["OMIM:621012"],"termid":"MONDO:0975874","xrefs":{"Monarch":{"xref_id":"0975874"}}}


id: FYPO:0003340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of re-entry into the mitotic cell cycle is decreased when the cell is in a population that has been in stationary phase and is then placed in conditions that allow recovery.","definition_xrefs":["PomBase:mah","PMID:9199286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"decreased re-entry into mitotic cell cycle during recovery from stationary phase","synonyms":[{"name":"decreased re-entry into mitotic cell cycle following growth to stationary phase","type":"exact"},{"name":"reduced re-entry into mitotic cell cycle during recovery from stationary phase","type":"exact"}],"termid":"FYPO:0003340"}


id: PBO:0052619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRIT1 ankyrin repeat containing","termid":"PBO:0052619"}


id: PBO:0069516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 785, pseudogene","termid":"PBO:0069516"}


id: GO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of platelet activating factor, 2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether catabolic process","termid":"GO:0044269"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"platelet activating factor catabolic process","synonyms":[{"name":"2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine catabolic process","type":"exact"},{"name":"PAF catabolic process","type":"related"}],"termid":"GO:0062234"}


id: PBO:0042236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolar coiled-coil protein 110","termid":"PBO:0042236"}


id: MONDO:0016792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mitochondrial DNA (obsolete MONDO:0016792)","secondary_identifiers":["Orphanet:254767"],"synonyms":[{"name":"OXPHOS disease due to a large-scale single deletion of mitochondrial DNA","type":"exact"},{"name":"OXPHOS disease due to a large-scale single deletion of mtDNA","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mtDNA","type":"exact"}],"termid":"MONDO:0016792","xrefs":{"Monarch":{"xref_id":"0016792"}}}


id: PBO:0072693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 3","termid":"PBO:0072693"}


id: PBO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","termid":"PBO:0090075"}


id: PBO:0068758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 3, pseudogene","termid":"PBO:0068758"}


id: MONDO:0600027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serious heritable structural anomalies of the right side of the heart, including pulmonary atresia, tricuspid valve disease and Ebstein's anomaly, and right ventricular outflow tract obstruction and/or pulmonary stenosis, that are present from birth.","definition_xrefs":["EFO:0600032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital right-sided heart lesions","termid":"MONDO:0600027","xrefs":{"Monarch":{"xref_id":"0600027"}}}


id: PBO:0003214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT organizer Mto2","termid":"PBO:0003214"}


id: FYPO:0007132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a greater extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"increased microtubule binding","termid":"FYPO:0007132"}


id: GO:0038037
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors.","definition_xrefs":["PMID:10713101","GOC:al","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor dimeric complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-protein coupled receptor dimer","type":"exact"},{"name":"G-protein coupled receptor dimeric complex","type":"exact"},{"name":"GPCR dimer","type":"exact"}],"termid":"GO:0038037","terms_by_termid":{"GO:0038038":null}}


id: PBO:0087718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation","termid":"PBO:0087718"}


id: FYPO:0005946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell cycle-regulated mRNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell cycle-regulated mRNAs are transcribed from genes whose level of transcription varies depending on cell cycle phase.","definition_xrefs":["PMID:15195092","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of cell cycle regulated gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell cycle regulated gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell cycle regulated gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle regulated gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell cycle regulated gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cell cycle-regulated gene mRNA during vegetative growth","type":"exact"},{"name":"reduced level of cell cycle regulated gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005946"}


id: GO:0061715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of a methyl group to the 2' oxygen atom of a nucleotide residue in an miRNA molecule.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:20705645"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA 2'-O-methylation (obsolete GO:0061715)","termid":"GO:0061715"}


id: MONDO:0004532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the auditory system","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"auditory system cancer","secondary_identifiers":["MESH:D004428","NCIT:C3000","DOID:833"],"synonyms":[{"name":"auditory system cancer","type":"exact"},{"name":"cancer of auditory system","type":"exact"},{"name":"malignant auditory system neoplasm","type":"exact"},{"name":"malignant neoplasm of auditory system","type":"exact"}],"termid":"MONDO:0004532","xrefs":{"Monarch":{"xref_id":"0004532"}}}


id: PATO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000575 absolute mass value (obsolete PATO:0000575)","termid":"PATO:0000575"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: PBO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_trichostatin_A","termid":"PBO:0031052"}


id: PBO:0047710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 1","termid":"PBO:0047710"}


id: MONDO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","secondary_identifiers":["Orphanet:217382","SCTID:711403001","GARD:10594","DOID:0050719","UMLS:C2751584","OMIM:613068","MESH:C567791","ICD9:266.2","icd11.foundation:1158040363","MEDGEN:442763"],"synonyms":[{"name":"cerebral folate deficiency syndrome","type":"related"},{"name":"cerebral folate receptor alpha deficiency","type":"exact"},{"name":"cerebral folate transport deficiency","type":"related"},{"name":"neurodegeneration due to cerebral folate TRANSPORT deficiency","type":"related"},{"name":"neurodegenerative syndrome due to cerebral folate transport deficiency","type":"exact"}],"termid":"MONDO:0013110","xrefs":{"Monarch":{"xref_id":"0013110"}}}


id: GO:0045564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor biosynthetic process (obsolete GO:0045564)","synonyms":[{"name":"activation of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor formation","type":"exact"},{"name":"positive regulation of TRAIL receptor synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor biosynthetic process","type":"exact"}],"termid":"GO:0045564"}


id: PBO:0065402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 5","termid":"PBO:0065402"}


id: PBO:0074189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 10","termid":"PBO:0074189"}


id: PBO:0017786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminoacyl tRNA Synthetase Cofactor","termid":"PBO:0017786"}


id: MONDO:1011780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gallbladder mucocele, non-human animal","secondary_identifiers":["OMIA:001524"],"termid":"MONDO:1011780","xrefs":{"Monarch":{"xref_id":"1011780"}}}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: GO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"negatively_regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulocyte differentiation","synonyms":[{"name":"down regulation of granulocyte differentiation","type":"exact"},{"name":"down-regulation of granulocyte differentiation","type":"exact"},{"name":"downregulation of granulocyte differentiation","type":"exact"},{"name":"inhibition of granulocyte differentiation","type":"narrow"}],"termid":"GO:0030853"}


id: MONDO:0700254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the digestive system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic gastrointestinal syndrome","termid":"MONDO:0700254","xrefs":{"Monarch":{"xref_id":"0700254"}}}


id: MONDO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duane anomaly-myopathy-scoliosis syndrome is characterized by the association of bilateral Duane anomaly type 3, severe scoliosis of early onset, congenital myopathy with hypotonia without muscular weakness, delayed motor development, and short stature. It has been described in one pair of sibs. The Duane type 3 anomaly consists of eye abduction and adduction palsy, globe retraction and narrowing of the palpebral fissure. Muscular biopsy shows aspecific myopathy. Intellectual development is normal. The syndrome is most likely inherited in an autosomal recessive manner. It differs from the Crisfield-Dretakis-Sharpe syndrome, in which short stature and muscular features are absent. Surgery of the scoliosis is necessary. Functional prognosis depends on the severity of the visual handicap.","definition_xrefs":["Orphanet:50817"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Duane anomaly-myopathy-scoliosis syndrome","secondary_identifiers":["UMLS:C4302550","GARD:18842","MEDGEN:928219"],"termid":"MONDO:0033672","xrefs":{"Monarch":{"xref_id":"0033672"}}}


id: MONDO:0005970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by infections with bacteria of the genus staphylococcus, usually with staphylococcus aureus.","definition_xrefs":["MESH:D011023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal pneumonia","secondary_identifiers":["ICD9:482.49","MEDGEN:18532","EFO:0007496","SCTID:22754005","ICD9:482.40","ICD9:482.4","UMLS:C0032308"],"synonyms":[{"name":"Staphylococcus caused pneumonia","type":"exact"},{"name":"Staphylococcus pneumonia","type":"exact"}],"termid":"MONDO:0005970","xrefs":{"Monarch":{"xref_id":"0005970"}}}


id: GO:0006906
data:
  {"annotated_genes":["SJAG_03403","SJAG_03670","SJAG_05184","SJAG_02241","SJAG_01324","SJAG_00204","SJAG_03889","SJAG_00826","SJAG_00171","SJAG_03536","SJAG_00430","SJAG_04513","SJAG_02587","SJAG_03552","SJAG_01697","SJAG_03347","SJAG_00380","SJAG_03848","SJAG_02315","SJAG_04023","SJAG_00557","SJAG_01379","SJAG_04739","SJAG_01633","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73732,77942,78362,79623,79776,90044,97603,100371,100604,109227,112277,117118,117163],"is_not":false,"summary":null,"term":"GO:0006906"},{"annotations":[72989,99226,99022,78957,76457,81544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[95441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[77419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[57855,77885,79506,75657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with its target membrane.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006906","terms_by_termid":{"GO:0006906":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null}}


id: PBO:0005818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit D (predicted)","termid":"PBO:0005818"}


id: PBO:0089960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex telomere binding subunit Rap1","termid":"PBO:0089960"}


id: PBO:0036268
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia 8","termid":"PBO:0036268"}


id: PBO:0034784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex PHD finger subunit Nto1 (predicted)","termid":"PBO:0034784"}


id: PBO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF1R antisense imprinted non-protein coding RNA","termid":"PBO:0051814"}


id: GO:1900219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:17314325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"activation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"activation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"activation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900219"}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:cilia","GO_REF:0000058","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: PBO:0061590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 1","termid":"PBO:0061590"}


id: GO:1901154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of paromomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"paromomycin metabolic process","termid":"GO:1901153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"paromomycin catabolic process","synonyms":[{"name":"paromomycin breakdown","type":"exact"},{"name":"paromomycin catabolism","type":"exact"},{"name":"paromomycin degradation","type":"exact"}],"termid":"GO:1901154"}


id: MOD:00161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glucosylated L-cysteine.","definition_xrefs":["PubMed:1145128","PubMed:5286858","PubMed:15279557","RESID:AA0152","Unimod:41#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00764","MOD:00905"],"is_obsolete":false,"name":"S-glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(beta-D-glucopyranosyl)sulfanyl]propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (Glc) cysteine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"S-(beta-D-glucopyranosyl)cysteine","type":"exact"},{"name":"S-glucosyl-L-cysteine","type":"exact"},{"name":"S-glycosyl-cysteine","type":"exact"},{"name":"SGlcCys","type":"exact"}],"termid":"MOD:00161"}


id: GO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of transmission of nerve impulse","termid":"GO:0051969"},{"relation_name":"positively_regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transmission of nerve impulse","synonyms":[{"name":"activation of transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of conduction of nerve impulse","type":"exact"},{"name":"stimulation of transmission of nerve impulse","type":"narrow"},{"name":"up regulation of transmission of nerve impulse","type":"exact"},{"name":"up-regulation of transmission of nerve impulse","type":"exact"},{"name":"upregulation of transmission of nerve impulse","type":"exact"}],"termid":"GO:0051971"}


id: MONDO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Basidiobolus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"subcutaneous mycosis","termid":"MONDO:0000255"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"Zygomycosis","termid":"MONDO:0019136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basidiobolomycosis","secondary_identifiers":["MEDGEN:575966","DOID:0050278","icd11.foundation:2087283296","SCTID:4921002","UMLS:C0343965"],"synonyms":[{"name":"Basidiobolus caused disease or disorder","type":"exact"},{"name":"Basidiobolus disease or disorder","type":"exact"},{"name":"Basidiobolus infectious disease","type":"exact"},{"name":"basidiobolomycosis","type":"exact"},{"name":"infection by Basidiobolus","type":"exact"},{"name":"infection caused by Basidiobolus","type":"exact"}],"termid":"MONDO:0000302","xrefs":{"Monarch":{"xref_id":"0000302"}}}


id: RO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of is evidence for","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_evidence","termid":"RO:0002558"}


id: FYPO:0009081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of potassium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to potassium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to potassium chloride and MMS","type":"exact"},{"name":"resistance to potassium chloride and MMS during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and MMS in combination","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to potassium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to potassium chloride and MMS","type":"exact"},{"name":"resistant to potassium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009081"}


id: PR:Q9Y7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.01c","synonyms":[{"name":"Spom972h-psy2","type":"exact"}],"termid":"PR:Q9Y7J8"}


id: MONDO:0850080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unicoronal and sagittal craniosynostosis","secondary_identifiers":["GARD:22477","UMLS:C5680396","Orphanet:620186","MEDGEN:1842804"],"termid":"MONDO:0850080","xrefs":{"Monarch":{"xref_id":"0850080"}}}


id: PBO:0089082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt1","termid":"PBO:0089082"}


id: GO:0030842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of intermediate filaments by the removal of monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"}


id: PBO:0028515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_peroxide_catabolism","termid":"PBO:0028515"}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: PBO:0048994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 5","termid":"PBO:0048994"}


id: GO:0015736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hexuronate is transported across a lipid bilayer, from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transport","termid":"GO:0015735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"hexuronate transmembrane transport","synonyms":[{"name":"hexuronate transport","type":"related"}],"termid":"GO:0015736"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: FYPO:0004728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules through a puncture in the nuclear envelope. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during vegetative growth","type":"exact"}],"termid":"FYPO:0004728"}


id: PBO:0078086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 3","termid":"PBO:0078086"}


id: PBO:0111920
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK family kinase","termid":"PBO:0111920"}


id: GO:0036400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a short neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Short neuropeptide F is an arthropod peptide of less than 28 residues (as small as 8-10 residues in some species) with a C-terminal RFamide or LRFamide.","definition_xrefs":["GOC:ha","PMID:21440021","PMID:16330127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"short neuropeptide F receptor activity","synonyms":[{"name":"sNPF receptor activity","type":"exact"}],"termid":"GO:0036400"}


id: GO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside metabolic process","termid":"GO:0001573"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ganglioside biosynthetic process","synonyms":[{"name":"ganglioside anabolism","type":"exact"},{"name":"ganglioside biosynthesis","type":"exact"},{"name":"ganglioside formation","type":"exact"},{"name":"ganglioside synthesis","type":"exact"}],"termid":"GO:0001574"}


id: FYPO:0004829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased during a cellular response to adenine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased phosphatase activity during cellular response to adenine starvation","synonyms":[{"name":"decreased phosphatase activity during adenine starvation","type":"exact"},{"name":"reduced phosphatase activity during cellular response to adenine starvation","type":"exact"}],"termid":"FYPO:0004829"}


id: MONDO:0008186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancytopenia and occlusive vascular disease","secondary_identifiers":["UMLS:C1868652","OMIM:167850","MEDGEN:358375","MESH:C566836"],"synonyms":[{"name":"pancytopenia and occlusive vascular disease","type":"exact"}],"termid":"MONDO:0008186","xrefs":{"Monarch":{"xref_id":"0008186"}}}


id: MONDO:0007305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral dysplasia","secondary_identifiers":["OMIM:118005","UMLS:C1861693","HP:0008469","MEDGEN:396199","MESH:C566140"],"synonyms":[{"name":"cervical vertebral dysplasia","type":"exact"},{"name":"cervical vertebral dysplasia (disease)","type":"exact"}],"termid":"MONDO:0007305","xrefs":{"Monarch":{"xref_id":"0007305"}}}


id: GO:2000603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"regulates","term_name":"secondary growth","termid":"GO:0080117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary growth","termid":"GO:2000603"}


id: PBO:0062723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily V member 1","termid":"PBO:0062723"}


id: MONDO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, autosomal recessive","secondary_identifiers":["UMLS:C1849250","MEDGEN:338640","GARD:15234","MESH:C564823","OMIM:269720"],"synonyms":[{"name":"Bfns, autosomal recessive","type":"related"},{"name":"autosomal dominant form of benign neonatal seizures","type":"related"},{"name":"convulsions benign familial neonatal dominant form","type":"related"},{"name":"convulsions, benign familial neonatal, autosomal recessive","type":"related"},{"name":"epilepsy, benign familial neonatal, autosomal recessive","type":"related"},{"name":"seizures, benign familial neonatal, autosomal recessive","type":"exact"}],"termid":"MONDO:0010021","xrefs":{"Monarch":{"xref_id":"0010021"}}}


id: GO:0042419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0198506732","GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine catabolic process","synonyms":[{"name":"adrenaline catabolic process","type":"exact"},{"name":"adrenaline catabolism","type":"exact"},{"name":"epinephrine breakdown","type":"exact"},{"name":"epinephrine catabolism","type":"exact"},{"name":"epinephrine degradation","type":"exact"}],"termid":"GO:0042419"}


id: MONDO:0008407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurogenic scapuloperoneal syndrome, Kaeser type","secondary_identifiers":["UMLS:C1867005","Orphanet:85146","OMIM:181400","GARD:10312","DOID:0111551","MEDGEN:356670","MESH:C566695"],"synonyms":[{"name":"Kaeser syndrome","type":"exact"},{"name":"SCPNK","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic type, of Kaeser","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic, Kaeser type","type":"related"},{"name":"stark-Kaeser syndrome","type":"exact"}],"termid":"MONDO:0008407","xrefs":{"Monarch":{"xref_id":"0008407"}}}


id: PBO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 10","termid":"PBO:0072211"}


id: PBO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JDP2 antisense RNA 1","termid":"PBO:0052007"}


id: MONDO:0009113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal recessive, inherited disorder caused by mutation of the BPGM gene. It is characterized by hemolytic anemia and splenomegaly.","definition_xrefs":["NCIT:C131638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia due to diphosphoglycerate mutase deficiency","secondary_identifiers":["MEDGEN:489898","GARD:1874","DOID:0111630","Orphanet:714","UMLS:C1291620","OMIM:222800"],"synonyms":[{"name":"BPGM deficiency","type":"related"},{"name":"DPGM deficiency","type":"related"},{"name":"bisphosphoglycerate mutase deficiency","type":"related"},{"name":"bisphosphoglyceromutase deficiency","type":"related"},{"name":"diphosphoglycerate mutase deficiency of erythrocyte","type":"related"},{"name":"diphosphoglycerate phosphatase deficiency","type":"exact"},{"name":"erythrocytosis, familial, 8","type":"exact"}],"termid":"MONDO:0009113","xrefs":{"Monarch":{"xref_id":"0009113"}}}


id: GO:0071979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility in which contractile cytoskeletal elements alter cell shape, resulting in the smooth movement of a cell through a liquid medium.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell swimming","termid":"GO:0071975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-mediated cell swimming","synonyms":[{"name":"cytoskeleton-mediated swimming motility","type":"exact"}],"termid":"GO:0071979"}


id: PBO:0084198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone methyltransferase, subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3K4; Set1p-dependent H3K4 trimethylation recruits Nrd1p, allowing efficient termination of snoRNAs and cryptic unstable transcripts (CUTs) by Nrd1p-Nab3p-Sen1p pathway; modulates histone acetylation levels in promoter proximal regions to ensure efficient Nrd1p-dependent termination; required in transcriptional silencing near telomeres and at silent mating type loci; has a SET domain","termid":"PBO:0084198"}


id: MONDO:0011397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant cerebellar ataxia, deafness and narcolepsy (ADCA-DN) is a polymorphic disorder and a subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by ataxia, sensorineural deafness and narcolepsy with cataplexy and dementia.","definition_xrefs":["Orphanet:314404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia, deafness and narcolepsy","secondary_identifiers":["GARD:12372","MEDGEN:813625","UMLS:C3807295","DOID:0050968","OMIM:604121"],"synonyms":[{"name":"ADCA-DN","type":"related"},{"name":"ADCA-DN syndrome","type":"exact"},{"name":"ADCADN","type":"related"},{"name":"autosomal dominant cerebellar ataxia, deafness and narcolepsy","type":"exact"},{"name":"autosomal dominant cerebellar ataxia, deafness, and narcolepsy","type":"related"},{"name":"autosomal dominant cerebellar ataxia-deafness-narcolepsy syndrome","type":"related"},{"name":"cerebellar ataxia, deafness, and narcolepsy, autosomal dominant","type":"related"}],"termid":"MONDO:0011397","xrefs":{"Monarch":{"xref_id":"0011397"}}}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: GO:2000022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of jasmonic acid mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of jasmonic acid mediated signaling pathway","synonyms":[{"name":"regulation of jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:2000022"}


id: PBO:0005824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.1.1","termid":"PBO:0005824"}


id: PBO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 1","termid":"PBO:0061081"}


id: PR:Q9UT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.03c gene.","definition_xrefs":["UniProtKB:Q9UT68","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.03c","synonyms":[{"name":"Spom972h-SPCC4F11.03c","type":"exact"}],"termid":"PR:Q9UT68"}


id: PBO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 17","termid":"PBO:0070962"}


id: PBO:0068755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 10, pseudogene","termid":"PBO:0068755"}


id: MONDO:0011934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatofibrosarcoma protuberans (DFSP) is a rare infiltrating soft tissue sarcoma, generally of low grade malignancy, arising from the dermis of the skin and characteristically associated with a specific chromosomal translocation t(17;22).","definition_xrefs":["Orphanet:31112"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"dermatofibrosarcoma protuberans","secondary_identifiers":["MedDRA:10057070","DOID:3507","icd11.foundation:1579898301","GARD:9569","MEDGEN:811326","OMIM:607907","ICDO:8832/3","ONCOTREE:DFSP","MESH:D018223","SCTID:276799004","UMLS:C3693482","NCIT:C4683"],"synonyms":[{"name":"DFSP","type":"exact"},{"name":"dermatofibrosarcoma","type":"exact"},{"name":"dermatofibrosarcoma protuberans","type":"exact"},{"name":"familial dermatofibrosarcoma protuberans (subtype)","type":"related"},{"name":"giant cell fibroblastoma","type":"related"},{"name":"metastatic dermatofibrosarcoma protuberans (subtype)","type":"related"}],"termid":"MONDO:0011934","xrefs":{"Monarch":{"xref_id":"0011934"}}}


id: PBO:0065009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 13","termid":"PBO:0065009"}


id: GO:0006161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyguanosine catabolic process","synonyms":[{"name":"deoxyguanosine breakdown","type":"exact"},{"name":"deoxyguanosine catabolism","type":"exact"},{"name":"deoxyguanosine degradation","type":"exact"}],"termid":"GO:0006161"}


id: FYPO:0004239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone acetylation during vegetative growth","termid":"FYPO:0000331"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004239"}


id: PBO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 13","termid":"PBO:0061355"}


id: PBO:0041845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent serine protein kinase","termid":"PBO:0041845"}


id: GO:0102718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: TRIBOA-beta-D-glucoside + S-adenosyl-L-methionine = (2R)-DIMBOA glucoside + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.241","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"TRIBOA-glucoside methyltransferase activity","secondary_identifiers":["RHEA:32099","MetaCyc:RXN-6687"],"termid":"GO:0102718"}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: SO:0001464
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST spanning part or all of the untranslated regions of a protein-coding transcript.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST","synonyms":[{"name":"UTR sequence tag","type":"exact"}],"termid":"SO:0001464"}


id: PBO:0076503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 3","termid":"PBO:0076503"}


id: PBO:0087113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated, nascent chain binding factor; binds N-terminal region of nascent peptides during translation; recognizes target proteins via its putative metallopeptidase peptide-binding pocket","termid":"PBO:0087113"}


id: FYPO:0002417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores with elongated germ tubes. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and germinated spores with elongated germ tubes (obsolete FYPO:0002417)","termid":"FYPO:0002417"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutamate synthase (NADPH) (obsolete GO:0019461)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: FYPO:0004727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed from existing nuclear microtubules. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004727"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0076829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN adaptor related protein complex 4 accessory protein","termid":"PBO:0076829"}


id: FYPO:0007532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks do not colocalize with nuclear pore complexes (NPCs) longer than actively replicating forks. Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased replication fork colocalization with nuclear pore complex","synonyms":[{"name":"decreased replication fork colocalization with NPC","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"decreased replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"},{"name":"reduced replication fork colocalization with nuclear pore complex","type":"exact"}],"termid":"FYPO:0007532"}


id: PBO:0081022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 3","termid":"PBO:0081022"}


id: PBO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 4","termid":"PBO:0045436"}


id: MONDO:1010087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatomyositis characterized by the presence of anti-TIF1 autoantibodies.","definition_xrefs":["PMID:31279808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"anti-TIF1 dermatomyositis","synonyms":[{"name":"anti-transcription intermediary factor 1 complex dermatomyositis","type":"exact"}],"termid":"MONDO:1010087","xrefs":{"Monarch":{"xref_id":"1010087"}}}


id: GO:0005709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during prophase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prophase chromosome (obsolete GO:0005709)","synonyms":[{"name":"prophase chromosome","type":"exact"}],"termid":"GO:0005709"}


id: PBO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 14","termid":"PBO:0071355"}


id: MONDO:0009308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","secondary_identifiers":["DOID:0070193","GARD:15175","UMLS:C1856255","OMIM:233690","NANDO:2201280","MEDGEN:383872","MESH:C565533"],"synonyms":[{"name":"CGD due to deficiency of the Alpha Subunit of cytochrome B","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-negative","type":"related"},{"name":"Cyba deficiency","type":"related"},{"name":"chronic granulomatous disease 4, autosomal recessive","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-negative","type":"exact"}],"termid":"MONDO:0009308","xrefs":{"Monarch":{"xref_id":"0009308"}}}


id: PBO:0055896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 17","termid":"PBO:0055896"}


id: GO:0044676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three polypeptides which also contains molybdenum, a molybdopterin guanine dinucleotide and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["PMID:8954165","GOC:mengo_curators","PMID:1915887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (molybdenum enzyme) complex","termid":"GO:0044676"}


id: GO:0007627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics, as seen in insects.","definition_xrefs":["GOC:ai","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Insecta) (obsolete GO:0007627)","synonyms":[{"name":"larval behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0007627"}


id: GO:0071006
data:
  {"annotated_genes":["SJAG_04898","SJAG_01315","SJAG_01504","SJAG_04117","SJAG_04783"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62588,72610,75233,79266,79704],"is_not":false,"summary":null,"term":"GO:0071006"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.","definition_xrefs":["PMID:18322460","GOC:ab","PMID:19239890","GOC:krc","ISBN:0879695897","ISBN:0879697393","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01315":null,"SJAG_01504":null,"SJAG_04117":null,"SJAG_04783":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2-type catalytic step 1 spliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"synonyms":[{"name":"GT-AG catalytic step 1 spliceosome","type":"narrow"},{"name":"U2-type activated spliceosome","type":"exact"},{"name":"major catalytic step 1 spliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex B2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071006","terms_by_termid":{"GO:0071006":null}}


id: MONDO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic and inherited neurodegenerative disorders affecting the cerebellum, pons, and inferior olives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"olivopontocerebellar atrophy","secondary_identifiers":["NCIT:C84947","icd11.foundation:1467584080","UMLS:C0028968","DOID:14784","MEDGEN:10435","MESH:D009849","ICD9:333.0","SCTID:67761004"],"synonyms":[{"name":"Dejerine-Thomas syndrome","type":"exact"},{"name":"OPCA","type":"related"},{"name":"Thomas' syndrome","type":"related"},{"name":"WADIA-swami syndrome","type":"exact"}],"termid":"MONDO:0002017","xrefs":{"Monarch":{"xref_id":"0002017"}}}


id: MONDO:0007869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kyrle disease is rare condition that affects the skin. People with this condition generally develop large papules with central keratin (a protein found in the skin, hair and nails) plugs throughout their body. These lesions are typically not painful but may cause severe itching. Although it can affect both men and women throughout life, the average age of onset is 30 years. The cause of the disease is currently unknown; however, it is often associated with certain conditions such as diabetes mellitus, kidney disease, liver abnormalities, and congestive heart failure. In some families, the condition appears to be inherited but an underlying genetic cause has not been identified. Treatment aims to address the associated signs and symptoms and any additional disease that may be present. Lesions often heal spontaneously but new ones continue to develop.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kyrle disease","secondary_identifiers":["MESH:C538130","OMIM:149500","UMLS:C0263382","MEDGEN:75516","SCTID:34042008"],"synonyms":[{"name":"Kyrle disease","type":"exact"},{"name":"Kyrle's disease","type":"related"},{"name":"hyperkeratosis follicularis et parafollicularis in cutem penetrans","type":"related"}],"termid":"MONDO:0007869","xrefs":{"Monarch":{"xref_id":"0007869"}}}


id: PBO:0035884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_export_from_nucleus_during_vegetative_growth","termid":"PBO:0035884"}


id: SO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of DNA located either at the end of the transcript that causes RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator","secondary_identifiers":["http://en.wikipedia.org/wiki/Terminator_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:terminator","type":"exact"},{"name":"terminator sequence","type":"exact"}],"termid":"SO:0000141"}


id: PATO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001075 absolute momentum (obsolete PATO:0001075)","termid":"PATO:0001075"}


id: MONDO:1010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, dog","secondary_identifiers":["OMIA:000933-9615"],"termid":"MONDO:1010556","xrefs":{"Monarch":{"xref_id":"1010556"}}}


id: MONDO:0013390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Q (LGMD2Q) is a form of limb-girdle muscular dystrophy characterized by proximal muscle weakness presenting in early childhood (with occasional falls and difficulties in climbing stairs) and a progressive course resulting in loss of ambulation in early adulthood. Muscle atrophy and multiple contractures have also been reported in rare cases.","definition_xrefs":["Orphanet:254361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of plectin","termid":"MONDO:0016198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Q","secondary_identifiers":["DOID:0110285","OMIM:613723","UMLS:C3150989","GARD:12542","MEDGEN:462339"],"synonyms":[{"name":"LGMD2Q","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy due to plectin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2Q","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 17","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Q","type":"exact"}],"termid":"MONDO:0013390","xrefs":{"Monarch":{"xref_id":"0013390"}}}


id: PBO:0055676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPE antisense RNA 1","termid":"PBO:0055676"}


id: MONDO:0009901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, inherited, popliteal pterygium syndrome characterized by severe popliteal webbing, microcephaly, a typical face with short palpebral fissures, ankyloblepharon, hypoplastic nose, filiform bands between the jaws and facial clefts, oligosyndactyly, genital abnormalities, and additional ectodermal anomalies (i.e. absent hair, eyebrows, lashes, nails). It is often fatal in the neonatal period, but patients living until childhood have been reported.","definition_xrefs":["Orphanet:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bartsocas-Papas syndrome 1","secondary_identifiers":["MEDGEN:337894","SCTID:722376008","UMLS:C1849718","GARD:4436","NCIT:C168990","OMIM:263650","MESH:C564874"],"synonyms":[{"name":"BPS","type":"related"},{"name":"Bartsocas Papas syndrome","type":"exact"},{"name":"Bartsocas-Papas syndrome","type":"exact"},{"name":"autosomal recessive popliteal pterygium syndrome","type":"exact"},{"name":"lethal popliteal pterygium syndrome","type":"exact"},{"name":"multiple pterygium syndrome, Aslan type","type":"related"},{"name":"popliteal pterygium syndrome lethal type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type","type":"related"},{"name":"popliteal pterygium syndrome, Bartsocas-Papas type 1","type":"exact"},{"name":"popliteal pterygium syndrome, lethal type","type":"exact"},{"name":"pterygium popliteal lethal type","type":"related"},{"name":"pterygium, popliteal, lethal type","type":"related"}],"termid":"MONDO:0009901","xrefs":{"Monarch":{"xref_id":"0009901"}}}


id: PBO:0063505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit","termid":"PBO:0063505"}


id: MONDO:0021929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis Ossificans resulting from trauma.","definition_xrefs":["NCIT:C35081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis ossificans","termid":"MONDO:0003964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"traumatic myositis ossificans","secondary_identifiers":["UMLS:C0040798","ICD9:728.12","MEDGEN:11895","SCTID:70917000"],"synonyms":[{"name":"Myositis ossificans circumscripta","type":"related"},{"name":"Myositis ossificans traumatica","type":"related"},{"name":"Traumatic Myositis Ossificans","type":"related"},{"name":"Traumatic myositis ossificans","type":"related"},{"name":"myositis ossificans circumscripta","type":"related"},{"name":"myositis ossificans traumatica","type":"related"},{"name":"traumatic myositis ossificans","type":"exact"}],"termid":"MONDO:0021929","xrefs":{"Monarch":{"xref_id":"0021929"}}}


id: GO:1902055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["PMID:23368997","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of neosartoricin biosynthetic process","synonyms":[{"name":"activation of neosartoricin anabolism","type":"exact"},{"name":"activation of neosartoricin biosynthesis","type":"exact"},{"name":"activation of neosartoricin biosynthetic process","type":"narrow"},{"name":"activation of neosartoricin formation","type":"exact"},{"name":"activation of neosartoricin synthesis","type":"exact"},{"name":"positive regulation of neosartoricin anabolism","type":"exact"},{"name":"positive regulation of neosartoricin biosynthesis","type":"exact"},{"name":"positive regulation of neosartoricin formation","type":"exact"},{"name":"positive regulation of neosartoricin synthesis","type":"exact"},{"name":"up regulation of neosartoricin anabolism","type":"exact"},{"name":"up regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up regulation of neosartoricin formation","type":"exact"},{"name":"up regulation of neosartoricin synthesis","type":"exact"},{"name":"up-regulation of neosartoricin anabolism","type":"exact"},{"name":"up-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up-regulation of neosartoricin formation","type":"exact"},{"name":"up-regulation of neosartoricin synthesis","type":"exact"},{"name":"upregulation of neosartoricin anabolism","type":"exact"},{"name":"upregulation of neosartoricin biosynthesis","type":"exact"},{"name":"upregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"upregulation of neosartoricin formation","type":"exact"},{"name":"upregulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902055"}


id: GO:0097515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized envelope lying outside the cell membrane of a spore derived from an asexual process. Examples of this process are found in bacterial and fungal species.","definition_xrefs":["GOC:mah","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"asexual spore wall","termid":"GO:0097515"}


id: MONDO:1010869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in dogs due to a mutation in the ARSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, ARSB-related, dog","secondary_identifiers":["OMIA:000666-9615"],"synonyms":[{"name":"mucopolysaccharidosis VI, dog","type":"related"}],"termid":"MONDO:1010869","xrefs":{"Monarch":{"xref_id":"1010869"}}}


id: GO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["PMID:11995829","UM-BBD_reactionID:r1065","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity (obsolete GO:0052758)","synonyms":[{"name":"TNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052758"}


id: GO:0016473
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism.","definition_xrefs":["PMID:14656431","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting F-type ATPase complex","synonyms":[{"name":"sodium-translocating F-type ATPase complex","type":"exact"}],"termid":"GO:0016473"}


id: GO:0018525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.","definition_xrefs":["RHEA:29603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoyl-CoA reductase activity","secondary_identifiers":["KEGG_REACTION:R05316","MetaCyc:OHBENZCOARED-RXN","EC:1.1.7.1","UM-BBD_reactionID:r0158"],"synonyms":[{"name":"4-hydroxybenzoyl-coA reductase (dehydroxylating) activity","type":"related"},{"name":"4-hydroxybenzoyl-coA:(acceptor) oxidoreductase activity","type":"related"}],"termid":"GO:0018525"}


id: PBO:0087984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; two forms of protein are made by alternative translation starts; localizes to both nucleus and mitochondrion to produce modified base N2,N2-dimethylguanosine in tRNAs in both compartments; nuclear Trm1p is evenly distributed around inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body (SPB) mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon SPB","termid":"PBO:0087984"}


id: PBO:0066631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein","termid":"PBO:0066631"}


id: PBO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2263","termid":"PBO:0054849"}


id: MONDO:0006838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of cutaneous tuberculosis. It is seen predominantly in women and typically involves the nasal mucosa; buccal mucosa; and conjunctival mucosa.","definition_xrefs":["MESH:D008177"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lupus vulgaris","secondary_identifiers":["icd11.foundation:1292667822","EFO:1001023","MEDGEN:9821","UMLS:C0024131","MedDRA:10025143","SCTID:10528009"],"termid":"MONDO:0006838","xrefs":{"Monarch":{"xref_id":"0006838"}}}


id: PBO:0070871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 2","termid":"PBO:0070871"}


id: MONDO:0020680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the bronchioles usually caused by the respiratory syncytial virus.","definition_xrefs":["NCIT:C39659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute bronchiolitis","secondary_identifiers":["ICD9:466.1","MEDGEN:113","SCTID:5505005","UMLS:C0001311","icd11.foundation:1310075986","ICD9:466.19"],"synonyms":[{"name":"Capillary pneumonia","type":"related"},{"name":"acute Bronchiolitis","type":"related"},{"name":"acute bronchiolitis","type":"exact"},{"name":"acute capillary bronchiolitis","type":"related"},{"name":"capillary pneumonia","type":"related"}],"termid":"MONDO:0020680","xrefs":{"Monarch":{"xref_id":"0020680"}}}


id: MONDO:0017761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of mineral absorption and transport","secondary_identifiers":["MEDGEN:1842552","GARD:21353","Orphanet:309836","ICD10CM:E83.3","icd11.foundation:1833416892","UMLS:C5681035","ICD10CM:E83.1"],"termid":"MONDO:0017761","xrefs":{"Monarch":{"xref_id":"0017761"}}}


id: PBO:0079759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoupling protein 2","termid":"PBO:0079759"}


id: PATO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (continuant)","termid":"PATO:0001635"}


id: GO:1904715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:PARL","PMID:20176123","GOC:pad","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0030163"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated autophagy","synonyms":[{"name":"down regulation of CMA","type":"related"},{"name":"down regulation of chaperone-mediated autophagy","type":"exact"},{"name":"down-regulation of CMA","type":"related"},{"name":"down-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"downregulation of CMA","type":"related"},{"name":"downregulation of chaperone-mediated autophagy","type":"exact"},{"name":"inhibition of CMA","type":"related"},{"name":"inhibition of chaperone-mediated autophagy","type":"narrow"},{"name":"negative regulation of CMA","type":"related"}],"termid":"GO:1904715"}


id: GO:0140347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of N-retinylidene-N-retinylphosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10412977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"N-retinylidene-phosphatidylethanolamine flippase activity","synonyms":[{"name":"N-retinylidene-phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140347"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: GO:0110019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits via an internal ribosome entry segment (IRES) before an AUG codon is encountered in an appropriate sequence context to initiate circular mRNA translation.","definition_xrefs":["PMID:28344082","GOC:sp","PMID:28344080","PMID:28281539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation of circular RNA","termid":"GO:0110018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"IRES-dependent translational initiation of circular RNA","synonyms":[{"name":"IRES-dependent translational initiation of circRNA","type":"exact"}],"termid":"GO:0110019"}


id: GO:0097511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A branched cellular projection (or cytoplasmic extension) that is extended from the surface of a dendritic immune cell, and which enables the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.","definition_xrefs":["PMID:12200351","GOC:cjm","CL:0000451","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic cell dendrite","termid":"GO:0097511"}


id: PR:Q9P7Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2A9.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.13","synonyms":[{"name":"Spom972h-SPBC2A9.13","type":"exact"}],"termid":"PR:Q9P7Z4"}


id: PBO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 2","termid":"PBO:0045060"}


id: GO:0052204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the functional activity of proteins in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function in other organism involved in symbiotic interaction (obsolete GO:0052204)","synonyms":[{"name":"down regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protein function in other organism","type":"exact"},{"name":"inhibition of protein function in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protein function in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052204"}


id: GO:0099609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the side of a microtubule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515","GO:0008017"],"is_obsolete":false,"name":"microtubule lateral binding","termid":"GO:0099609"}


id: PBO:0040181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 2","termid":"PBO:0040181"}


id: SO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon variant that changes at least one base of the first codon of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator_codon_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php","http://snpeff.sourceforge.net/SnpEff_manual.html","loinc:LA6695-6"],"synonyms":[{"name":"Jannovar:initiator_codon_variant","type":"exact"},{"name":"VAT:startOverlap","type":"exact"},{"name":"initiatior codon variant","type":"exact"},{"name":"initiator codon change","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_START","type":"related"}],"termid":"SO:0001582"}


id: PBO:0082251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0082251"}


id: PBO:0109604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A11","termid":"PBO:0109604"}


id: PBO:0070445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 2","termid":"PBO:0070445"}


id: PBO:0063774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 1","termid":"PBO:0063774"}


id: GO:0102294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NAD+ = cholest-5-en-3-one + NADH + H+.","definition_xrefs":["RHEA:35459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","termid":"GO:0003854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12693"],"termid":"GO:0102294"}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0029689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0029689"}


id: GO:0070082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle lumen","type":"exact"}],"termid":"GO:0070082"}


id: PBO:0052231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 8","termid":"PBO:0052231"}


id: PBO:0080399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS29 retromer complex component","termid":"PBO:0080399"}


id: GO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ingression involved in gastrulation with mouth forming second","termid":"GO:0055111"}


id: PBO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_CCCP","termid":"PBO:0030704"}


id: GO:1904338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15522889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"}


id: FYPO:0002425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal during mitosis. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah","GO:0070648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable organization during mitosis","synonyms":[{"name":"abnormal actin cable organisation during mitotic interphase","type":"exact"},{"name":"abnormal actin cable organization during mitotic M phase","type":"related"},{"name":"abnormal actin cable organization during mitotic interphase during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic nuclear division","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002425"}


id: GO:1903354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of distal tip cell migration.","definition_xrefs":["PMID:24968003","GOC:mm2","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"distal tip cell migration","termid":"GO:0097628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of distal tip cell migration","termid":"GO:1903354"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: PBO:0077480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200C","termid":"PBO:0077480"}


id: PBO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1 (predicted)","termid":"PBO:0000512"}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: MONDO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slowly progressing leukemia characterized by a clonal (malignant) proliferation of maturing and mature myeloid cells or mature lymphocytes. When the clonal cellular population is composed of myeloid cells, the process is called chronic myelogenous leukemia. When the clonal cellular population is composed of lymphocytes, it is classified as chronic lymphocytic leukemia, hairy cell leukemia, or T-cell large granular lymphocyte leukemia.","definition_xrefs":["NCIT:C3483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"chronic leukemia","secondary_identifiers":["DOID:1036","MEDGEN:220905","UMLS:C1279296","SCTID:92812005","ICD9:208.10"],"synonyms":[{"name":"CLL","type":"related"},{"name":"CML","type":"related"},{"name":"adult chronic leukaemia","type":"related"},{"name":"adult chronic leukemia","type":"related"},{"name":"chronic leukaemia (disease)","type":"exact"},{"name":"chronic leukemia","type":"exact"},{"name":"chronic leukemia (disease)","type":"exact"},{"name":"leukaemia (disease), chronic","type":"exact"},{"name":"leukemia (disease), chronic","type":"exact"}],"termid":"MONDO:0001014","xrefs":{"Monarch":{"xref_id":"0001014"}}}


id: PBO:0011123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Syt22","termid":"PBO:0011123"}


id: PBO:0065769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinoid dihydropteridine reductase","termid":"PBO:0065769"}


id: GO:0003380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration","termid":"GO:0003371"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0007010"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in gastrulation","termid":"GO:0003380"}


id: PBO:0057945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-1","termid":"PBO:0057945"}


id: GO:0047990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-L-glutamate + H+ = 4-amino-3-hydroxybutanoate + CO2.","definition_xrefs":["EC:4.1.1.16","RHEA:14073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyglutamate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04135","MetaCyc:HYDROXYGLUTAMATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase (4-amino-3-hydroxybutanoate-forming)","type":"related"},{"name":"3-hydroxy-L-glutamate 1-carboxy-lyase activity","type":"related"}],"termid":"GO:0047990"}


id: MONDO:0009681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"},{"relation_name":"is_a","term_name":"collagen 6-related myopathy","termid":"MONDO:0100225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1A","secondary_identifiers":["UMLS:C0410179","NANDO:1200215","OMIM:254090","DOID:0060946","MEDGEN:98046"],"synonyms":[{"name":"UCMD1","type":"related"},{"name":"Ullrich Scleroatonic muscular dystrophy","type":"related"},{"name":"Ullrich congenital muscular dystrophy","type":"related"},{"name":"Ullrich congenital muscular dystrophy 1","type":"exact"},{"name":"Ullrich congenital muscular dystrophy type 1","type":"broad"},{"name":"Ullrich disease","type":"related"},{"name":"muscular dystrophy, Scleroatonic","type":"related"}],"termid":"MONDO:0009681","xrefs":{"Monarch":{"xref_id":"0009681"}}}


id: GO:0007588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excretion","secondary_identifiers":["Wikipedia:Excretion"],"termid":"GO:0007588"}


id: GO:0010563
data:
  {"annotated_genes":["SJAG_01187","SJAG_04422","SJAG_01906","SJAG_00685","SJAG_05314","SJAG_00053","SJAG_03940","SJAG_03170","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89875,59709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[74846,77912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[115083,110954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[117618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[109302,112336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"negatively_regulates","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00685":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorus metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010563","terms_by_termid":{"GO:0045820":null,"GO:0071072":null,"GO:1902647":null,"GO:1905707":null,"GO:2001211":null}}


id: FYPO:0007419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere tethering at the nuclear periphery is decreased during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere localization to nuclear periphery","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere tethering at nuclear periphery during G0","synonyms":[{"name":"decreased telomere anchoring at nuclear periphery during G0","type":"exact"},{"name":"decreased telomere tethering to NE in G0","type":"related"},{"name":"decreased telomere tethering to NE in quiescence","type":"related"},{"name":"increased telomere detachment from nuclear envelope in quiescence","type":"related"}],"termid":"FYPO:0007419"}


id: PBO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Akr1 (predicted)","termid":"PBO:0000452"}


id: MOD:00472
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11746907","Unimod:94","URL:http://dx.doi.org/10.1002/rcm.517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d0","synonyms":[{"name":"IMID","type":"related"},{"name":"IMID d0","type":"related"}],"termid":"MOD:00472"}


id: PBO:0069334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 593, pseudogene","termid":"PBO:0069334"}


id: GO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the cyanelle, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The best characterized cyanelle ribonuclease P complex, from the alga Cyanophora paradoxa, contains a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cyanelle ribonuclease P complex","synonyms":[{"name":"cyanelle RNase P complex","type":"exact"}],"termid":"GO:0030679"}


id: GO:0062237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["PMID:31189538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to postsynapse","termid":"GO:0062237"}


id: FYPO:0006116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to actin cortical patch","synonyms":[{"name":"abolished protein localisation to actin cortical patch","type":"exact"},{"name":"abolished protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin patch","type":"exact"},{"name":"protein localization to actin cortical patch abolished","type":"exact"}],"termid":"FYPO:0006116"}


id: PBO:0075759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 1","termid":"PBO:0075759"}


id: PBO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member B","termid":"PBO:0047199"}


id: PBO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDST1 antisense RNA 1","termid":"PBO:0060686"}


id: SO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An array includes two or more genes, or two or more gene subarrays, contiguously arranged where the individual genes, or subarrays, are either identical in sequence, or essentially so.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array","synonyms":[{"name":"gene array","type":"exact"}],"termid":"SO:0005851"}


id: PBO:0076831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 2","termid":"PBO:0076831"}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: PBO:0063321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentriolar material 1","termid":"PBO:0063321"}


id: MONDO:0010765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","secondary_identifiers":["GARD:5068","NCIT:C120198","DOID:14448","MEDGEN:445380","SCTID:95218005","NORD:1750","OMIMPS:400044","UMLS:C2936694","MESH:D006061"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: GO:0018545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.","definition_xrefs":["UM-BBD_enzymeID:e0346"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H nitroreductase activity (obsolete GO:0018545)","termid":"GO:0018545"}


id: PBO:0084118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme A:farnesyltransferase; catalyzes first step in conversion of protoheme to heme A prosthetic group required for cytochrome c oxidase activity; human ortholog COX10 can complement yeast cox10 null mutant; human ortholog COX10 is associated with mitochondrial disorders","termid":"PBO:0084118"}


id: GO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of BMP signaling pathway","secondary_identifiers":["GO:0090097"],"synonyms":[{"name":"regulation of BMP receptor signaling pathway","type":"related"},{"name":"regulation of BMP signalling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030510"}


id: GO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methylgalactoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methylgalactoside is a compound in which the H of the OH group on carbon-1 of galactose is replaced by a methyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"methylgalactoside transport","termid":"GO:0015765"}


id: PBO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPVL antisense RNA 1","termid":"PBO:0043843"}


id: MONDO:0013259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Oguchi disease in which the cause of the disease is a mutation in the GRK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary night blindness (obsolete MONDO:0004587)","termid":"MONDO:0004587"},{"relation_name":"is_a","term_name":"Oguchi disease","termid":"MONDO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Oguchi disease-2","secondary_identifiers":["GARD:15660","UMLS:C3150678","DOID:0110713","MEDGEN:462028","OMIM:613411"],"synonyms":[{"name":"CSNBO2","type":"exact"},{"name":"GRK1 Oguchi disease","type":"exact"},{"name":"Oguchi disease 2","type":"related"},{"name":"Oguchi disease caused by mutation in GRK1","type":"exact"},{"name":"Oguchi disease type 2","type":"exact"},{"name":"congenital stationary night blindness Oguchi type 2","type":"exact"},{"name":"night blindness, congenital stationary, Oguchi type 2","type":"related"}],"termid":"MONDO:0013259","xrefs":{"Monarch":{"xref_id":"0013259"}}}


id: PBO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.10","termid":"PBO:0004964"}


id: MONDO:0010748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Torticollis-keloids-cryptorchidism-renal dysplasia syndrome is an extremely rare developmental defect during embryogenesis malformation syndrome characterized by congenital muscular torticollis associated with skin anomalies (such as multiple keloids, pigmented nevi, epithelioma), urogenital malformations (including cryptorchidism and hypospadias) and renal dysplasia (e.g. chronic pyelonephritis, renal atrophy). Additional reported features include varicose veins, intellectual disability and musculoskeletal anomalies.","definition_xrefs":["Orphanet:3341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torticollis-keloids-cryptorchidism-renal dysplasia syndrome","secondary_identifiers":["UMLS:C1839129","GARD:5230","MEDGEN:326819","MESH:C536970","OMIM:314300"],"synonyms":[{"name":"Goeminne TKCR syndrome","type":"exact"},{"name":"Goeminne syndrome","type":"related"},{"name":"TKCR","type":"related"},{"name":"Tkc","type":"related"},{"name":"Tkcr syndrome","type":"related"},{"name":"torticollis keloids cryptorchidism renal dysplasia","type":"related"},{"name":"torticollis, keloids, cryptorchidism, and renal dysplasia","type":"related"}],"termid":"MONDO:0010748","xrefs":{"Monarch":{"xref_id":"0010748"}}}


id: PBO:0080351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 3, pseudogene","termid":"PBO:0080351"}


id: PBO:0108919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 5, pseudogene","termid":"PBO:0108919"}


id: MONDO:0012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any selective IgA deficiency disease in which the cause of the disease is a mutation in the TNFRSF13B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selective IgA deficiency disease","termid":"MONDO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunoglobulin A deficiency 2","secondary_identifiers":["OMIM:609529","MESH:C536291","UMLS:C1836032","GARD:10198","MEDGEN:372182"],"synonyms":[{"name":"IGAD2","type":"related"},{"name":"IMMUNOGLOBULIN A deficiency 2","type":"related"},{"name":"IgA, selective deficiency of, TACI related","type":"related"},{"name":"IgA, selective deficiency of, TACI-related","type":"related"},{"name":"Immunoglobulin A, selective deficiency of, TACI related","type":"related"},{"name":"Immunoglobulin A, selective deficiency of, TACI-related","type":"related"},{"name":"Immunoglobulin a deficiency type 2","type":"exact"},{"name":"TNFRSF13B selective IgA deficiency disease","type":"exact"},{"name":"immunoglobulin a deficiency 2","type":"exact"},{"name":"selective IgA deficiency disease caused by mutation in TNFRSF13B","type":"exact"}],"termid":"MONDO:0012291","xrefs":{"Monarch":{"xref_id":"0012291"}}}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: FYPO:0003793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to osmotic stress","synonyms":[{"name":"normal RNA accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"normal transcript level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0003793"}


id: PBO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 15","termid":"PBO:0045567"}


id: PBO:0081576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 503","termid":"PBO:0081576"}


id: MONDO:0019756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lobar holoprosencephaly is the mildest classical form of holoprosencephaly (HPE) characterized by separation of the right and left cerebral hemispheres and lateral ventricules with some continuity across the frontal neocortex, especially rostrally and ventrally.","definition_xrefs":["Orphanet:93924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lobar holoprosencephaly","secondary_identifiers":["icd11.foundation:121649206","MEDGEN:96559","SCTID:253136007","GARD:16830","UMLS:C0431362"],"termid":"MONDO:0019756","xrefs":{"Monarch":{"xref_id":"0019756"}}}


id: PBO:0114412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Tam11","termid":"PBO:0114412"}


id: PR:O13873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PCI domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02053","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein CSN12 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.08","secondary_identifiers":["UniProtKB:O13873"],"synonyms":[{"name":"Spom972h-PCID2","type":"exact"}],"termid":"PR:O13873"}


id: GO:0021715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the inferior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"medulla oblongata formation","termid":"GO:0021580"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus formation","synonyms":[{"name":"inferior olive biosynthesis","type":"related"},{"name":"inferior olive formation","type":"related"}],"termid":"GO:0021715"}


id: PBO:0039773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 6","termid":"PBO:0039773"}


id: GO:0004642
data:
  {"annotated_genes":["SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71633],"is_not":false,"summary":null,"term":"GO:0004642"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide + L-glutamine + ATP + H2O = 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + L-glutamate + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.5.3","RHEA:17129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R04463","Reactome:R-HSA-73812","MetaCyc:FGAMSYN-RXN"],"synonyms":[{"name":"2-N-formyl-1-N-(5-phospho-D-ribosyl)glycinamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"FGAM synthase activity","type":"related"},{"name":"FGAM synthetase activity","type":"related"},{"name":"FGAR amidotransferase activity","type":"related"},{"name":"FGARAT activity","type":"related"},{"name":"N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"formylglycinamide ribonucloetide amidotransferase activity","type":"related"},{"name":"formylglycinamide ribotide amidotransferase activity","type":"related"},{"name":"phosphoribosylformylglycinamidine synthetase activity","type":"related"},{"name":"phosphoribosylformylglycineamidine synthetase activity","type":"related"}],"termid":"GO:0004642","terms_by_termid":{"GO:0004642":null}}


id: PBO:0076997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 11","termid":"PBO:0076997"}


id: GO:0030068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic viral life cycle (obsolete GO:0030068)","synonyms":[{"name":"lytic viral life cycle","type":"exact"}],"termid":"GO:0030068"}


id: MONDO:0014158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the ANKS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 16","secondary_identifiers":["MEDGEN:815650","SCTID:444558002","OMIM:615382","UMLS:C3809320","DOID:0111124","GARD:18183"],"synonyms":[{"name":"ANKS6 nephronophthisis (disease)","type":"exact"},{"name":"NPHP16","type":"exact"},{"name":"autosomal recessive infantile NPHP","type":"related"},{"name":"autosomal recessive infantile nephronophthisis","type":"related"},{"name":"infantile nephronophthisis","type":"related"},{"name":"nephronophthisis (disease) caused by mutation in ANKS6","type":"exact"},{"name":"nephronophthisis 16","type":"exact"},{"name":"nephronophthisis type 16","type":"exact"}],"termid":"MONDO:0014158","xrefs":{"Monarch":{"xref_id":"0014158"}}}


id: MONDO:0015795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Embryonal sarcoma of the liver is a rare primary malignant hepatic neoplasm of childhood of mesenchymal origin. It can rarely occur in adults. It is characterized by abdominal mass, right upper quadrant or epigastric pain, nausea, anorexia, intermittent fever or headache.","definition_xrefs":["Orphanet:178315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"undifferentiated embryonal sarcoma of the liver","secondary_identifiers":["MEDGEN:902204","UMLS:C2205345","GARD:20145","ONCOTREE:UESL","SCTID:716648006"],"synonyms":[{"name":"UES","type":"exact"},{"name":"embryonal sarcoma of the liver","type":"exact"},{"name":"undifferentiated sarcoma of the liver","type":"exact"}],"termid":"MONDO:0015795","xrefs":{"Monarch":{"xref_id":"0015795"}}}


id: PBO:0060530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8 (putative)","termid":"PBO:0060530"}


id: PBO:0062633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily I member 1 pseudogene","termid":"PBO:0062633"}


id: GO:0070541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platinum stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platinum ion","synonyms":[{"name":"response to platinum","type":"exact"}],"termid":"GO:0070541"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: PBO:0052908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-5, pseudogene","termid":"PBO:0052908"}


id: GO:0006364
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id: GO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine catabolic process","synonyms":[{"name":"mannosamine breakdown","type":"exact"},{"name":"mannosamine catabolism","type":"exact"},{"name":"mannosamine degradation","type":"exact"}],"termid":"GO:0046346"}


id: PBO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1 (predicted)","termid":"PBO:0015667"}


id: GO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of apoptosis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apoptosis by sphingosine-1-phosphate signaling pathway (obsolete GO:0003377)","synonyms":[{"name":"regulation of apoptosis by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of apoptosis by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003377"}


id: PBO:0113307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in homologous recombination; attenuates resection of DNA double-strand break ends and stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA (ssDNA); anneals complementary ssDNA; involved in the repair of double-strand breaks in DNA during vegetative growth, meiosis and UV induced sister chromatid recombination; forms a homodecameric ring; phosphorylation by Cdc28p in G2/M phase promotes Rad52p ring interaction that leads to superstructure formation","termid":"PBO:0113307"}


id: GO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.","definition_xrefs":["EC:3.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"polygalacturonase activity","secondary_identifiers":["MetaCyc:RXN-2103"],"synonyms":[{"name":"endo-D-galacturonase activity","type":"exact"},{"name":"endo-polygalacturonase activity","type":"exact"},{"name":"endogalacturonase activity","type":"exact"},{"name":"endopolygalacturonase activity","type":"exact"},{"name":"pectin depolymerase activity","type":"narrow"},{"name":"pectin hydrolase activity","type":"related"},{"name":"pectin polygalacturonase activity","type":"related"},{"name":"pectinase activity","type":"narrow"},{"name":"pectolase activity","type":"related"},{"name":"poly(1,4-alpha-D-galacturonide) glycanohydrolase activity","type":"exact"},{"name":"poly-alpha-1,4-galacturonide glycanohydrolase activity","type":"exact"}],"termid":"GO:0004650"}


id: PBO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring cleavage dioxygenase, pseudogene, single frameshift and no methionine","termid":"PBO:0001811"}


id: PBO:0041886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 4","termid":"PBO:0041886"}


id: MONDO:0006376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A superficial fibromatosis arising from soft tissue of the plantar regions. It is characterized by the presence of spindle-shaped fibroblasts, hypercellularity, and an infiltrative growth pattern.","definition_xrefs":["NCIT:C4680"],"gene_count":0,"genotype_count":0,"name":"obsolete plantar fibromatosis (obsolete MONDO:0006376)","termid":"MONDO:0006376","xrefs":{"Monarch":{"xref_id":"0006376"}}}


id: PBO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC-like complex subunit Ctf18","termid":"PBO:0003211"}


id: FYPO:0005067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane (DETA NONOate). Cells stop growing (and may die) at a concentration of 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","synonyms":[{"name":"hypersensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","type":"exact"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane during vegetative growth","type":"exact"},{"name":"sensitive to DETA NONOate","type":"exact"},{"name":"sensitive to diethylenetriamine NONOate","type":"exact"}],"termid":"FYPO:0005067"}


id: PBO:0072971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 1","termid":"PBO:0072971"}


id: SO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match to a primer sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_match","synonyms":[{"name":"primer match","type":"exact"}],"termid":"SO:0001472"}


id: PBO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035796"}


id: GO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"eugenol catabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol catabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolism","type":"exact"},{"name":"eugenic acid catabolic process","type":"exact"},{"name":"eugenic acid catabolism","type":"exact"},{"name":"eugenol breakdown","type":"exact"},{"name":"eugenol catabolism","type":"exact"},{"name":"eugenol degradation","type":"exact"}],"termid":"GO:0042856"}


id: PBO:0078326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 1","termid":"PBO:0078326"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: MONDO:0859165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, facial dysmorphism, and brain abnormalities","secondary_identifiers":["UMLS:C5543591","MEDGEN:1780615","OMIM:619383"],"termid":"MONDO:0859165","xrefs":{"Monarch":{"xref_id":"0859165"}}}


id: PBO:0084845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of human Bcl-2 interacting protein BMRP","termid":"PBO:0084845"}


id: PBO:0111768
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0111768"}


id: PBO:0113446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit III of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; ubiquinone-binding protein","termid":"PBO:0113446"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: MONDO:1010666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott Syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Scott Syndrome, non-human animal","termid":"MONDO:1010083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scott Syndrome, dog","secondary_identifiers":["OMIA:001353-9615"],"termid":"MONDO:1010666","xrefs":{"Monarch":{"xref_id":"1010666"}}}


id: MONDO:0018451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. X-linked form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/x_linked"],"gene_count":0,"genotype_count":0,"name":"obsolete X-linked distal hereditary motor neuropathy (obsolete MONDO:0018451)","secondary_identifiers":["Orphanet:404538"],"synonyms":[{"name":"X-linked dHMN","type":"exact"},{"name":"X-linked distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, X-linked","type":"exact"}],"termid":"MONDO:0018451","xrefs":{"Monarch":{"xref_id":"0018451"}}}


id: GO:0030799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide metabolic process (obsolete GO:0030799)","synonyms":[{"name":"regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030799"}


id: PBO:0017662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transmembrane transporter Itr1","termid":"PBO:0017662"}


id: PBO:0039351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1 pseudogene 1","termid":"PBO:0039351"}


id: PBO:0038646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 1","termid":"PBO:0038646"}


id: GO:1905424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:17244647","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905424)","synonyms":[{"name":"regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron differentiation by regulation of Wnt signaling","type":"related"}],"termid":"GO:1905424"}


id: GO:0045893
data:
  {"annotated_genes":["SJAG_00904","SJAG_01532","SJAG_04191","SJAG_05341","SJAG_01307","SJAG_05343","SJAG_05313","SJAG_01403","SJAG_01150","SJAG_04712","SJAG_03538","SJAG_03590","SJAG_01771","SJAG_02730","SJAG_02389","SJAG_03183","SJAG_02474","SJAG_04206","SJAG_03484","SJAG_04647","SJAG_01113","SJAG_01778","SJAG_04749","SJAG_01583","SJAG_04092","SJAG_03897","SJAG_03143","SJAG_00973","SJAG_00210","SJAG_03126","SJAG_00156","SJAG_04551","SJAG_01805","SJAG_05247","SJAG_01938","SJAG_02196","SJAG_04820","SJAG_02849","SJAG_02494","SJAG_00766","SJAG_02608","SJAG_02709","SJAG_03241","SJAG_01062","SJAG_01441","SJAG_02810","SJAG_02938","SJAG_01151","SJAG_00150","SJAG_03061","SJAG_00802","SJAG_00698","SJAG_02218","SJAG_02723","SJAG_03735","SJAG_02698","SJAG_03346","SJAG_03289","SJAG_00342","SJAG_02252","SJAG_01149","SJAG_03967","SJAG_00613","SJAG_01740","SJAG_04009","SJAG_00822","SJAG_04855","SJAG_05203","SJAG_03622","SJAG_05288","SJAG_02057","SJAG_00163","SJAG_04388","SJAG_06638","SJAG_03501","SJAG_01213","SJAG_04755","SJAG_04421","SJAG_06576","SJAG_00693","SJAG_02592","SJAG_00266","SJAG_00269","SJAG_04705","SJAG_02391","SJAG_02138","SJAG_05187","SJAG_01199","SJAG_04611","SJAG_01764","SJAG_00641","SJAG_02551","SJAG_02254","SJAG_03421","SJAG_02773","SJAG_05153","SJAG_01694","SJAG_02311","SJAG_03118","SJAG_03879","SJAG_01878","SJAG_01243","SJAG_00792","SJAG_04839","SJAG_04036","SJAG_02326","SJAG_02048","SJAG_06599","SJAG_04249","SJAG_03067","SJAG_03981","SJAG_00164","SJAG_01952","SJAG_02255","SJAG_01916","SJAG_02415","SJAG_04099","SJAG_02472","SJAG_03573","SJAG_03519","SJAG_04813","SJAG_00297","SJAG_00909","SJAG_02956","SJAG_01193","SJAG_02671","SJAG_00987","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72016,81600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[87410,88926,106211,92967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[89173,81353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[111548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[79814,78118,80324,81263,74937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[111881,75147,72019,86860,75128,97029,94575,97923,106970,111462,78155,98083,107131,99011,62863,76581,81372,72526,79179,100017,65000,78525,64101,72098,75639,67610,74022,70866,68620,66463,73637,101800,97027,97028,103978,108023,108199,109261,117850,96431,116981,118726,60669,75561,80907,114430,118727,77400,98803,73283,76812,79221,92226,100006,108374,101673,69058,61954,72535,93286,95024,108612,115879,101753,102696,96796,102224,74653,81442,97031,80381,116596,77690,62959,74248,79823,111332,70133,116071,73442,97030,93188,70341,81745,95184,93854,77580,81603,71126,63742,107531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[72847,65714,79975,81336,116605,73259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[90145,98533,108316,103202,108289,105240,93816,98181,93931,105596,65372,86897,94876,101481,114331,105923,105786,118562,95358,89831,102943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"positive regulation of RNA biosynthetic process","termid":"GO:1902680"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":128,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00766":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01193":null,"SJAG_01199":null,"SJAG_01213":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01403":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01740":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01805":null,"SJAG_01878":null,"SJAG_01916":null,"SJAG_01938":null,"SJAG_01952":null,"SJAG_02048":null,"SJAG_02057":null,"SJAG_02138":null,"SJAG_02196":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02389":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02592":null,"SJAG_02608":null,"SJAG_02671":null,"SJAG_02698":null,"SJAG_02709":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02810":null,"SJAG_02849":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03421":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03897":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04099":null,"SJAG_04191":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04551":null,"SJAG_04611":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04813":null,"SJAG_04820":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05187":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043193","GO:0045941","GO:0061020"],"synonyms":[{"name":"activation of gene-specific transcription","type":"related"},{"name":"activation of transcription, DNA-dependent","type":"narrow"},{"name":"positive regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"positive regulation of gene-specific transcription","type":"related"},{"name":"positive regulation of transcription, DNA-dependent","type":"exact"},{"name":"positive regulation of transcription, DNA-templated","type":"exact"},{"name":"stimulation of gene-specific transcription","type":"narrow"},{"name":"stimulation of transcription, DNA-dependent","type":"narrow"},{"name":"transcription activator activity","type":"related"},{"name":"up regulation of gene-specific transcription","type":"related"},{"name":"up regulation of transcription, DNA-dependent","type":"exact"},{"name":"up-regulation of gene-specific transcription","type":"related"},{"name":"up-regulation of transcription, DNA-dependent","type":"exact"},{"name":"upregulation of gene-specific transcription","type":"related"},{"name":"upregulation of transcription, DNA-dependent","type":"exact"}],"termid":"GO:0045893","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null,"GO:1904595":null}}


id: PBO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P (predicted)","termid":"PBO:0000184"}


id: FYPO:0003090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"decreased replication fork arrest at rDNA repeats","synonyms":[{"name":"decreased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"reduced replication fork arrest at rDNA repeats","type":"exact"}],"termid":"FYPO:0003090"}


id: PR:Q9USU3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fbh1 gene.","definition_xrefs":["UniProtKB:Q9USU3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box DNA helicase protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.01","synonyms":[{"name":"Spom972h-fbh1","type":"exact"}],"termid":"PR:Q9USU3"}


id: PBO:0004424
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.23","termid":"PBO:0004424"}


id: GO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 3-O-acetylation of a trichothecene. Trichothecenes are sesquiterpene epoxide mycotoxins that act as potent inhibitors of eukaryotic protein synthesis.","definition_xrefs":["PMID:10583973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase activity","termid":"GO:0045462"}


id: PBO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_deubiquitination_following_cellular_response_to_hydroxyurea_during_vegetative_growth","termid":"PBO:0036027"}


id: PBO:0053906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1198","termid":"PBO:0053906"}


id: PBO:0005701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Adg3 (predicted)","termid":"PBO:0005701"}


id: PBO:0079969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 7","termid":"PBO:0079969"}


id: PBO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Scw1","termid":"PBO:0005234"}


id: MONDO:0011275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive acromesomelic dysplasia characterized by severe dwarfism (adult height >120 cm), both axial and appendicular involvement (shortening of the middle and distal segments of limbs and vertebral shortening), and with normal facial appearance and intelligence. It is a less severe form than acromesomelic dysplasia, Grebe type and acromesomelic dysplasia, Hunter-Thomson type.","definition_xrefs":["Orphanet:40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 1, Maroteaux type","secondary_identifiers":["OMIM:602875","DOID:0080050","MEDGEN:355199","GARD:507","MESH:C535661","SCTID:718559000","UMLS:C1864356"],"synonyms":[{"name":"AMDM","type":"related"},{"name":"St. Helena dysplasia","type":"related"},{"name":"acromesomelic dwarfism Maroteux type","type":"related"},{"name":"acromesomelic dysplasia 1, Maroteaux type","type":"exact"},{"name":"acromesomelic dysplasia Maroteaux type","type":"related"},{"name":"acromesomelic dysplasia, Maroteaux type","type":"exact"}],"termid":"MONDO:0011275","xrefs":{"Monarch":{"xref_id":"0011275"}}}


id: GO:0085010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance entering host via endocytosis (obsolete GO:0085010)","termid":"GO:0085010"}


id: PBO:0055786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 3","termid":"PBO:0055786"}


id: MONDO:0033665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 78","secondary_identifiers":["UMLS:C5436768","MEDGEN:1777362","GARD:18156","OMIM:619081","DOID:0112159"],"synonyms":[{"name":"DFNA78","type":"narrow"},{"name":"deafness, autosomal dominant 78","type":"narrow"}],"termid":"MONDO:0033665","xrefs":{"Monarch":{"xref_id":"0033665"}}}


id: PBO:0079315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 7B","termid":"PBO:0079315"}


id: PBO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil protein involved in septum formation Rng10","termid":"PBO:0034735"}


id: MONDO:0019421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability, Seemanova type is characterized by microcephaly, intellectual deficit, growth retardation and hypogenitalism. It has been described in four boys from one family. A characteristic facies and ophthalmologic anomalies were also present and included microphthalmia, microcornea and cataract. Transmission is X-linked.","definition_xrefs":["Orphanet:85323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Seemanova type","secondary_identifiers":["GARD:19057","SCTID:718897009","UMLS:C4305088","MEDGEN:930757"],"termid":"MONDO:0019421","xrefs":{"Monarch":{"xref_id":"0019421"}}}


id: FYPO:0001661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular cAMP level","termid":"FYPO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cAMP level","synonyms":[{"name":"increased cAMP accumulation","type":"related"},{"name":"increased cellular cAMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular cAMP level during vegetative growth","type":"exact"},{"name":"increased cellular cyclic AMP level","type":"exact"}],"termid":"FYPO:0001661"}


id: PBO:0004907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase (predicted)","termid":"PBO:0004907"}


id: GO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SAGA complex is transported to, or maintained in, a specific location in the transcription regulatory region of a gene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SAGA complex localization to transcription regulatory region","synonyms":[{"name":"SAGA complex localization to promoter","type":"exact"},{"name":"SAGA complex recruitment","type":"exact"}],"termid":"GO:0072742"}


id: MONDO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"mitochondrial complex II deficiency, nuclear type","secondary_identifiers":["OMIMPS:252011"],"termid":"MONDO:0031230","xrefs":{"Monarch":{"xref_id":"0031230"}}}


id: GO:2001044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of integrin-mediated signaling pathway","synonyms":[{"name":"regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001044"}


id: PBO:0090290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rei1","termid":"PBO:0090290"}


id: PR:O94446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone acetyltransferase KAT5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.12c","secondary_identifiers":["UniProtKB:O94446"],"synonyms":[{"name":"Spom972h-KAT5","type":"exact"}],"termid":"PR:O94446"}


id: FYPO:0003851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on MTT","synonyms":[{"name":"normal cell population growth in presence of MTT","type":"exact"},{"name":"normal cell population growth on MTT","type":"exact"},{"name":"normal cellular response to MTT","type":"related"},{"name":"normal growth on 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"normal vegetative cell population growth on MTT","type":"exact"}],"termid":"FYPO:0003851"}


id: PR:Q9UTD6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yea6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C227.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.03c","synonyms":[{"name":"Spom972h-yea6","type":"exact"}],"termid":"PR:Q9UTD6"}


id: PBO:0091736
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(8)","termid":"PBO:0091736"}


id: PBO:0056984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-2","termid":"PBO:0056984"}


id: GO:1900602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of endocrocin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"endocrocin biosynthetic process","synonyms":[{"name":"endocrocin anabolism","type":"exact"},{"name":"endocrocin biosynthesis","type":"exact"},{"name":"endocrocin formation","type":"exact"},{"name":"endocrocin synthesis","type":"exact"}],"termid":"GO:1900602"}


id: PBO:0088076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0088076"}


id: GO:0030554
data:
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id: MOD:00732
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a xylose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"xylosylated","synonyms":[{"name":"Xyl","type":"exact"}],"termid":"MOD:00732"}


id: MOD:01601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-121 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01601"}


id: MONDO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the TK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","secondary_identifiers":["DOID:0111523","MEDGEN:934701","UMLS:C4310734","OMIM:617069","GARD:16183"],"synonyms":[{"name":"PEOB3","type":"exact"},{"name":"TK2 autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in TK2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3; PEOB3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 3","type":"related"}],"termid":"MONDO:0014898","xrefs":{"Monarch":{"xref_id":"0014898"}}}


id: GO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate.","definition_xrefs":["EC:2.7.1.94","MetaCyc:ACYLGLYCEROL-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acylglycerol kinase activity","secondary_identifiers":["Reactome:R-HSA-5696074","RHEA:19293"],"synonyms":[{"name":"ATP:acylglycerol 3-phosphotransferase activity","type":"related"},{"name":"MGK","type":"related"},{"name":"monoacylglycerol kinase (phosphorylating)","type":"related"},{"name":"monoacylglycerol kinase activity","type":"related"},{"name":"monoglyceride kinase activity","type":"related"},{"name":"monoglyceride phosphokinase activity","type":"related"},{"name":"sn-2-monoacylglycerol kinase activity","type":"related"}],"termid":"GO:0047620"}


id: FYECO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamate nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"PMG","type":"narrow"},{"name":"glucose minimal medium, glutamate nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamate nitrogen source","type":"related"}],"termid":"FYECO:0000263"}


id: PBO:0090190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pho7","termid":"PBO:0090190"}


id: MOD:01906
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydromethionine.","definition_xrefs":["PubMed:18688235","PubMed:19775156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01906"}


id: PBO:0086422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase with a role in biogenesis of RNA pol II and polIII; may be involved in assembly of RNA polymerases II and III and in their transport into the nucleus; may have a role in sister chromatid cohesion; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; contains a Gly-Pro-Asn motif in the G domain; similar to Npa3p and Gpn2p","termid":"PBO:0086422"}


id: PBO:0086344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes pseudouridylation at positions 35 and 56 in U2 snRNA, position 50 in 5S rRNA, position 13 in cytoplasmic tRNAs, and position 35 in pre-tRNA(Tyr); also pseudouridylates some mRNAs; relocates from nucleus to cytoplasm during heat shock and differentially modifies some mRNAs during heat shock; conserved in archaea, vertebrates, and some bacteria","termid":"PBO:0086344"}


id: GO:0044091
data:
  {"annotated_genes":["SJAG_03783","SJAG_03891","SJAG_00900","SJAG_00971","SJAG_03915","SJAG_04883","SJAG_01242","SJAG_04615","SJAG_01745","SJAG_03219","SJAG_03536","SJAG_05207","SJAG_04489","SJAG_04781","SJAG_01467","SJAG_00663","SJAG_02320","SJAG_00826","SJAG_04972","SJAG_04275","SJAG_04509","SJAG_01050","SJAG_04922","SJAG_01769","SJAG_00416","SJAG_04080","SJAG_03746","SJAG_03688","SJAG_03892","SJAG_02248","SJAG_04319","SJAG_00114","SJAG_04470","SJAG_04010","SJAG_03313","SJAG_02241","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118647,97059,94867,118163,109687,99418,101235,98336,106940,113525,118464,104833,97096,90763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[87343,97192,92531,97860,109895,109483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"},{"annotations":[119090,97464,100409,119092,119091,106114,95458,102674,90816,119089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[73874],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"},{"annotations":[105563,93993,99350,99349,115572,99636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04319":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04883":null,"SJAG_04922":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"membrane biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0044091","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:0101026":null}}


id: GO:0031972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chloroplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast intermembrane space","synonyms":[{"name":"chloroplast envelope lumen","type":"exact"}],"termid":"GO:0031972"}


id: FYPO:0001557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethionine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ethionine","synonyms":[{"name":"resistance to DL-ethionine","type":"related"},{"name":"resistance to S-ethylhomocysteine","type":"exact"},{"name":"resistance to ethionine during mitotic cell cycle","type":"related"},{"name":"resistance to ethionine during vegetative growth","type":"exact"},{"name":"resistant to ethionine","type":"exact"}],"termid":"FYPO:0001557"}


id: PBO:0054676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2083","termid":"PBO:0054676"}


id: MONDO:0800128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined immunodeficiency due to a deficiency in the POLE2 gene.","definition_xrefs":["PMID:26365386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to POLE2 deficiency","termid":"MONDO:0800128","xrefs":{"Monarch":{"xref_id":"0800128"}}}


id: MONDO:0032583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 24, primary, autosomal recessive","secondary_identifiers":["UMLS:C4748555","MEDGEN:1648413","OMIM:618179","GARD:16302"],"synonyms":[{"name":"MCPH24","type":"related"},{"name":"MICROCEPHALY 24, PRIMARY, AUTOSOMAL RECESSIVE","type":"related"}],"termid":"MONDO:0032583","xrefs":{"Monarch":{"xref_id":"0032583"}}}


id: PBO:0059958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 3","termid":"PBO:0059958"}


id: PBO:0028104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0028104"}


id: GO:2000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of fatty acid transport","termid":"GO:2000191"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: PBO:0088639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop58","termid":"PBO:0088639"}


id: FYPO:0006409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of nitric oxide measured in a cell is higher than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular nitric oxide level","termid":"FYPO:0006408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular nitric oxide level during stationary phase","synonyms":[{"name":"increased cellular NO level during stationary phase","type":"exact"},{"name":"increased cellular nitric oxide level in stationary phase","type":"exact"},{"name":"increased nitric oxide accumulation during stationary phase","type":"related"}],"termid":"FYPO:0006409"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: GO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during interphase of the cell cycle. Chromosomes are usually decondensed during interphase and each long DNA molecule in a chromosome is divided into a large number of discrete domains that are folded differently.","definition_xrefs":["GOC:ai","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete interphase chromosome (obsolete GO:0005707)","synonyms":[{"name":"interphase chromosome","type":"exact"}],"termid":"GO:0005707"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: GO:0016818
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id: PBO:0002423
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id: PBO:0083002
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2; recognizes and binds damaged DNA with Rad23p during nucleotide excision repair (NER); also involved with Rad23p in turnover of ubiquitylated proteins; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage; RAD4 and RAD51 pathways confer resistance to benzo[a]pyrene dihydrodiol","termid":"PBO:0083002"}


id: PBO:0073760
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id: MONDO:0019273
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id: GO:0102254
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id: PBO:0043406
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id: MONDO:0016863
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id: PR:Q9HDX9
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id: PBO:0077793
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id: MONDO:0032784
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id: PBO:0039563
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id: PBO:0073392
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id: FYPO:0005206
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id: SO:0001706
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id: GO:0046964
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id: GO:0031321
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id: PBO:0044912
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id: MONDO:0023186
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id: PBO:0028463
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id: GO:0004734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pyrimidodiazepine + oxidized glutathione = 6-pyruvoyltetrahydropterin + 2 glutathione.","definition_xrefs":["EC:1.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, disulfide as acceptor","termid":"GO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyrimidodiazepine synthase activity","secondary_identifiers":["MetaCyc:1.5.4.1-RXN","RHEA:10720"],"synonyms":[{"name":"PDA synthase activity","type":"related"},{"name":"pyrimidodiazepine:glutathione-disulfide oxidoreductase (ring-opening, cyclizing)","type":"related"}],"termid":"GO:0004734"}


id: PBO:0058505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5695","termid":"PBO:0058505"}


id: PBO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GatB/YqeY domain protein","termid":"PBO:0000537"}


id: GO:0102986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an NDP-alpha-D-glucose + D-glucose = a ribonucleoside 5'-diphosphate + alpha,alpha-trehalose + H+.","definition_xrefs":["RHEA:47416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"trehalose synthase activity","secondary_identifiers":["MetaCyc:RXN-9603","EC:2.4.1.245"],"termid":"GO:0102986"}


id: PBO:0084440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL6","termid":"PBO:0084440"}


id: PBO:0077925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane phosphatase with tensin homology","termid":"PBO:0077925"}


id: FYPO:0002728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal, when the cell is in a culture entering stationary phase. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PMID:2743431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated cell with enlarged nucleus","termid":"FYPO:0002083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002403","FYPO:0001985","FYPO:0000005","FYPO:0000631"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus upon entry into stationary phase","synonyms":[{"name":"lethal; swollen elongated cell with enlarged nucleus upon entry into stationary phase","type":"exact"}],"termid":"FYPO:0002728"}


id: GO:1902841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["PMID:24004945","GOC:TermGenie","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of netrin-activated signaling pathway","synonyms":[{"name":"regulation of netrin signaling pathway","type":"exact"},{"name":"regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"regulation of netrin-activated signalling pathway","type":"exact"},{"name":"regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902841"}


id: MONDO:0015533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"benign cephalic histiocytosis","secondary_identifiers":["SCTID:255192005","Orphanet:157997","ICD9:216.8","UMLS:C0347403","icd11.foundation:339468256","MEDGEN:578000","GARD:20019"],"termid":"MONDO:0015533","xrefs":{"Monarch":{"xref_id":"0015533"}}}


id: SO:1000099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The extension of the translational product at either (or both) the N-terminus and/or the C-terminus.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000099 sequence_variant_causing_polypeptide_elongation (obsolete SO:1000099)","synonyms":[{"name":"mutation causing polypeptide elongation","type":"related"},{"name":"sequence variant causing polypeptide elongation","type":"exact"}],"termid":"SO:1000099"}


id: PBO:0074854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 42B","termid":"PBO:0074854"}


id: GO:0014003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte development","synonyms":[{"name":"oligodendrocyte cell development","type":"exact"}],"termid":"GO:0014003"}


id: MONDO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises centrally from the jaw. It derives from odontogenic epithelial remnants. It includes solid type squamous cell carcinoma, squamous cell carcinoma that arises from an odontogenic cyst, and squamous cell carcinoma that derives from a keratocystic odontogenic tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary intraosseous squamous cell carcinoma","secondary_identifiers":["NCIT:C54295","UMLS:C1709663","EFO:1000492","MEDGEN:313618"],"synonyms":[{"name":"PIOSCC","type":"exact"}],"termid":"MONDO:0006385","xrefs":{"Monarch":{"xref_id":"0006385"}}}


id: PBO:0070327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 16","termid":"PBO:0070327"}


id: PBO:0088577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase Cts2","termid":"PBO:0088577"}


id: PBO:0073055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCYL2 pseudogene 1","termid":"PBO:0073055"}


id: PATO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's inability of being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flexibility","termid":"PATO:0001543"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflexible","synonyms":[{"name":"stiff","type":"exact"},{"name":"stiffness","type":"related"}],"termid":"PATO:0001545"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: PBO:0087141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that may be involved in translational regulation; binds specific categories of mRNAs, including those that contain upstream open reading frames (uORFs) and internal ribosome entry sites (IRES); interacts genetically with chromatin remodelers and splicing factors, linking chromatin state, splicing and as a result mRNA maturation","termid":"PBO:0087141"}


id: PBO:0038496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 6","termid":"PBO:0038496"}


id: GO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.","definition_xrefs":["GOC:jid","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye development","secondary_identifiers":["Wikipedia:Eye_development","GO:0042460"],"termid":"GO:0001654"}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["Orphanet:1899","UMLS:C4551623","MEDGEN:1645042","NANDO:2201260","NANDO:1200650","DOID:0080727","MESH:C562625","GARD:2084","SCTID:4170004","OMIM:130060","NCIT:C125701"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: FYPO:0007534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the threonine residue at position 4 the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PMID:30282034","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD threonine 4 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0007534"}


id: PBO:0029631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exocytosis","termid":"PBO:0029631"}


id: PBO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are1 (predicted)","termid":"PBO:0001480"}


id: MONDO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 11","termid":"MONDO:0016932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 11","secondary_identifiers":["UMLS:C5679716","GARD:20868","Orphanet:262785","MEDGEN:1825972"],"synonyms":[{"name":"partial duplication of chromosome 11p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 11","type":"exact"},{"name":"partial trisomy of chromosome 11p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 11","type":"exact"}],"termid":"MONDO:0016948","xrefs":{"Monarch":{"xref_id":"0016948"}}}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: GO:1905851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of backward locomotion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11717360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"negatively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of backward locomotion","synonyms":[{"name":"down regulation of backward locomotion","type":"exact"},{"name":"down-regulation of backward locomotion","type":"exact"},{"name":"downregulation of backward locomotion","type":"exact"},{"name":"inhibition of backward locomotion","type":"narrow"}],"termid":"GO:1905851"}


id: PBO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase-like protein","termid":"PBO:0090318"}


id: PBO:0080215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin","termid":"PBO:0080215"}


id: MOD:00975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3'-chlorotyrosine","termid":"MOD:00975"}


id: FYPO:0007214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more heterochromatin islands is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at heterochromatin island","synonyms":[{"name":"abolished protein localisation to chromatin at heterochromatin island during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at heterochromatin island abolished","type":"exact"}],"termid":"FYPO:0007214"}


id: PBO:0067796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 98","termid":"PBO:0067796"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: PBO:0078056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 46","termid":"PBO:0078056"}


id: PBO:0083252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to related yeast","termid":"PBO:0083252"}


id: MONDO:0019152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oguchi disease is an autosomal recessive retinal disorder characterized by congenital stationary night blindness and the Mizuo-Nakamura phenomenon.","definition_xrefs":["Orphanet:75382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Oguchi disease","secondary_identifiers":["UMLS:C1306122","MESH:C537743","icd11.foundation:1759055065","GARD:10118","MEDGEN:224927"],"synonyms":[{"name":"Oguchi disease","type":"exact"},{"name":"Oguchi syndrome","type":"exact"},{"name":"congenital stationary night blindness, Oguchi type","type":"exact"},{"name":"stationary night blindness, Oguchi type","type":"related"}],"termid":"MONDO:0019152","xrefs":{"Monarch":{"xref_id":"0019152"}}}


id: GO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic icosahedral capsid assembly","termid":"GO:0039710"}


id: GO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glycine acid amide by hydrolysis and oxidation of an interior Gly-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0088"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glycine amidation (obsolete GO:0018041)","termid":"GO:0018041"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: GO:0010915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"regulation of VLDL clearance","type":"exact"},{"name":"regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010915"}


id: MONDO:0020444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subaortic course of innominate vein is a rare congential anomaly of the great veins characterized by an anomalous course of the left brachiocephalic vein, passing from left to right below the aortic arch and entering the superior vena cava below the orifice of the azygos vein. Patients are frequently asymptomatic and diagnosed incidentally on imaging studies. Other cardiac malformations may be associated.","definition_xrefs":["Orphanet:99113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic course of innominate vein","secondary_identifiers":["GARD:19656","UMLS:C4707821","MEDGEN:1637333","SCTID:766756002"],"synonyms":[{"name":"subaortic course of brachiocephalic vein","type":"exact"}],"termid":"MONDO:0020444","xrefs":{"Monarch":{"xref_id":"0020444"}}}


id: PBO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc24","termid":"PBO:0018007"}


id: PBO:0029035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_multinucleate_cell_with_elongated_germ_tube","termid":"PBO:0029035"}


id: FYPO:0006992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the right outer repeat region (otr1R) of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere outer repeat","termid":"FYPO:0004742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin silencing at centromere otr1R","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromere otr1R region","type":"exact"},{"name":"normal chromatin silencing at centromeric otr1R","type":"exact"},{"name":"normal chromatin silencing at pericentric region otr1R","type":"related"},{"name":"normal chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"normal heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"normal heterochromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006992"}


id: PBO:0109359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109359"}


id: PBO:0040412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a2","termid":"PBO:0040412"}


id: PR:O59804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 10 kDa chaperonin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10 kDa heat shock protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.06c","secondary_identifiers":["UniProtKB:O59804"],"synonyms":[{"name":"10 kDa chaperonin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HSP10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-groS","type":"exact"}],"termid":"PR:O59804"}


