# terms

id: GO:0008853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exodeoxyribonuclease III activity (obsolete GO:0008853)","termid":"GO:0008853"}


id: PBO:0070199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 124 pseudogene","termid":"PBO:0070199"}


id: PBO:0084491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084491"}


id: MONDO:0020776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family CHLAMYDIACEAE.","definition_xrefs":["MESH:D002694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydiaceae infections","secondary_identifiers":["MEDGEN:3013","EFO:1001288","UMLS:C0008153"],"synonyms":[{"name":"Chlamydiaceae Infection","type":"related"},{"name":"Chlamydiaceae Infections","type":"related"},{"name":"Infection, Chlamydiaceae","type":"related"},{"name":"Infections, Chlamydiaceae","type":"related"}],"termid":"MONDO:0020776","xrefs":{"Monarch":{"xref_id":"0020776"}}}


id: PATO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female receptivity","termid":"PATO:0001720"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:rph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["GOC:cjm","GOC:sart","MP:0009837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: FYPO:0002264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more polysaccharides released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of polysaccharide in growth medium","synonyms":[{"name":"increased concentration of polysaccharides in growth medium","type":"exact"},{"name":"increased level of polysaccharide in growth medium","type":"exact"},{"name":"increased release of polysaccharide into growth medium","type":"related"}],"termid":"FYPO:0002264"}


id: PBO:0062388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 8 pseudogene","termid":"PBO:0062388"}


id: GO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid as found within host cells with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell plastid","termid":"GO:0033651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell chloroplast","termid":"GO:0033652"}


id: PBO:0089575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A inhibitor Sds23/Moc1","termid":"PBO:0089575"}


id: MONDO:0100379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(1;11)(q21;q23). (A cytogenetic abnormality that refers to the translocation of the long arm (q21) of chromosome 1 and the long arm (q23) of chromosome 11. It is associated with KMT2A (MLL)/MLLT11 (AF1Q) fusions, acute myeloid leukemia and some cases of acute lymphoblastic leukemia.)","definition_xrefs":["NCIT:C168759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(1;11)(q21;q23)","synonyms":[{"name":"AML, t(1;11)(q21;q23)","type":"exact"}],"termid":"MONDO:0100379","xrefs":{"Monarch":{"xref_id":"0100379"}}}


id: MONDO:0005280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious or non-infectious inflammatory process affecting the prostate gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatitis","secondary_identifiers":["DOID:14654","HP:0000024","ICD9:601.4","ICD9:601.8","MESH:D011472","EFO:0003830","MEDGEN:10965","NCIT:C26866","ICD9:601.9","UMLS:C0033581","SCTID:9713002","ICD9:601"],"synonyms":[{"name":"inflammation of prostate gland","type":"exact"},{"name":"prostate gland inflammation","type":"exact"},{"name":"prostatitis","type":"exact"},{"name":"prostatitis (disease)","type":"exact"}],"termid":"MONDO:0005280","xrefs":{"Monarch":{"xref_id":"0005280"}}}


id: GO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the mouth and the anus forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming first","synonyms":[{"name":"protostomic gastrulation","type":"narrow"}],"termid":"GO:0001703"}


id: GO:0102061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-endo-beta-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"endo-beta-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10483","EC:4.2.3.53"],"synonyms":[{"name":"(+)-endo-beta-bergamotene synthase ((2Z,6Z)-farnesyl diphosphate cyclizing)","type":"exact"},{"name":"(2Z,6Z)-farnesyl diphosphate = (+)-endo-beta-bergamotene","type":"exact"},{"name":"endo-beta-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102061"}


id: PBO:0070483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 18","termid":"PBO:0070483"}


id: PBO:0081657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 582","termid":"PBO:0081657"}


id: PR:O74430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1672.09 gene.","definition_xrefs":["UniProtKB:O74430","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C1672.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.09","synonyms":[{"name":"Spom972h-SPCC1672.09","type":"exact"}],"termid":"PR:O74430"}


id: GO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of plant organ formation","termid":"GO:0090709"}


id: GO:0033661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of reactive oxygen species produced by the host as part of its innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated defense to host-produced reactive oxygen species","synonyms":[{"name":"down regulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"down-regulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"downregulation by organism of defense-related host AOS production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROI production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROS production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"negative regulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"negative regulation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"suppression by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0033661"}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: GO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"negative regulation of integrin biosynthetic process","termid":"GO:0045720"},{"relation_name":"negatively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"down regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"down-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"downregulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"inhibition of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of beta 2 integrin anabolism","type":"exact"},{"name":"negative regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"negative regulation of beta 2 integrin formation","type":"exact"},{"name":"negative regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045774"}


id: PBO:0073197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P ligand","termid":"PBO:0073197"}


id: PBO:0064396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNISR antisense RNA 1","termid":"PBO:0064396"}


id: MONDO:0021447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the testis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of testis","secondary_identifiers":["icd11.foundation:815021426","ICD9:222.0","MEDGEN:57576","SCTID:92428008","UMLS:C0154007","NCIT:C3612"],"synonyms":[{"name":"benign neoplasm of the testis","type":"exact"},{"name":"benign testicular neoplasm","type":"exact"},{"name":"benign testicular tumor","type":"exact"},{"name":"benign testicular tumour","type":"exact"},{"name":"benign tumor of testis","type":"exact"},{"name":"benign tumor of the testis","type":"exact"},{"name":"benign tumour of testis","type":"exact"},{"name":"benign tumour of the testis","type":"exact"},{"name":"testis benign neoplasm","type":"exact"}],"termid":"MONDO:0021447","xrefs":{"Monarch":{"xref_id":"0021447"}}}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: PR:P41891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gar2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein gar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.02","synonyms":[{"name":"Spom972h-gar2","type":"exact"}],"termid":"PR:P41891"}


id: FYPO:0002829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phytochelatin level","synonyms":[{"name":"decreased cellular cadystin level","type":"exact"},{"name":"decreased cellular phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytochelatin level during vegetative growth","type":"exact"},{"name":"decreased phytochelatin accumulation","type":"related"},{"name":"reduced cellular phytochelatin level","type":"exact"}],"termid":"FYPO:0002829"}


id: GO:1901251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung goblet cell differentiation","termid":"GO:1901249"},{"relation_name":"positively_regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung goblet cell differentiation","synonyms":[{"name":"activation of lung goblet cell differentiation","type":"narrow"},{"name":"activation of pulmonary goblet cell differentiation","type":"narrow"},{"name":"positive regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"up regulation of lung goblet cell differentiation","type":"exact"},{"name":"up regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"up-regulation of lung goblet cell differentiation","type":"exact"},{"name":"up-regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"upregulation of lung goblet cell differentiation","type":"exact"},{"name":"upregulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901251"}


id: MONDO:0700176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that occurs in cats. It is associated with exposure to feline leukemia virus and feline immunodeficiency virus.","definition_xrefs":["NCIT:C132193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline lymphoma","secondary_identifiers":["OMIA:001733-9685"],"termid":"MONDO:0700176","xrefs":{"Monarch":{"xref_id":"0700176"}}}


id: PBO:0082360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-related protein and dual specificity member of the E1 family; mediates the attachment of Atg12p to Atg5p and Atg8p to phosphatidylethanolamine which are required steps in autophagosome formation; E1 enzymes are also known as ubiquitin-activating enzymes; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0082360"}


id: GO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling in response to host (obsolete GO:0075174)","synonyms":[{"name":"regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075174"}


id: PBO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi3","termid":"PBO:0004355"}


id: MONDO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the major vestibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland adenocarcinoma","secondary_identifiers":["UMLS:C0238016","NCIT:C7719","DOID:6316","MEDGEN:116035"],"synonyms":[{"name":"Bartholin gland adenocarcinoma","type":"exact"},{"name":"adenocarcinoma of Bartholin's gland","type":"related"},{"name":"adenocarcinoma of the Bartholin's gland","type":"exact"},{"name":"major vestibular gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0003853","xrefs":{"Monarch":{"xref_id":"0003853"}}}


id: PBO:0063459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA divergent transcript","termid":"PBO:0063459"}


id: PR:O13899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.08c gene.","definition_xrefs":["UniProtKB:O13899","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.08c","synonyms":[{"name":"Spom972h-SPAC22A12.08c","type":"exact"}],"termid":"PR:O13899"}


id: PBO:0003923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (predicted)","termid":"PBO:0003923"}


id: GO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two monomeric IgA immunoglobulin complexes linked through both direct disulfide bonds and through a disulfide binded monomer of J chain acting as a bridge. Each IgA monomer consists of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds. Dimeric IgA is sometimes complexed additionally with secretory component, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"dimeric IgA immunoglobulin complex","synonyms":[{"name":"dimeric IgA antibody","type":"exact"},{"name":"dimeric IgA1 antibody","type":"narrow"}],"termid":"GO:0071750"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: FYPO:0007066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the 90S preribosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal 90S preribosome assembly","synonyms":[{"name":"normal 90S preribosome assembly during mitotic cell cycle","type":"related"},{"name":"normal 90S preribosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007066"}


id: PBO:0056438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 11","termid":"PBO:0056438"}


id: PBO:0040638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BASP1 antisense RNA 1","termid":"PBO:0040638"}


id: GO:0016088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A polypeptide hormone that stimulates glucose uptake by muscle and adipose tissue, and promotes glycogenesis, lipogenesis and the synthesis of proteins and nucleic acids.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin (obsolete GO:0016088)","synonyms":[{"name":"insulin","type":"exact"}],"termid":"GO:0016088"}


id: MONDO:0002705
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are identified.","definition_xrefs":["NCIT:C40354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast mucinous cystadenocarcinoma","secondary_identifiers":["DOID:3609","MEDGEN:267769","UMLS:C1511318"],"synonyms":[{"name":"breast mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002705","xrefs":{"Monarch":{"xref_id":"0002705"}}}


id: PBO:0050875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH3B divergent transcript","termid":"PBO:0050875"}


id: PBO:0049117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 182","termid":"PBO:0049117"}


id: PBO:0087211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; subunit of complex with Trm112p that methylates translation release factor Sup45p (eRF1) in the ternary complex eRF1-eRF3-GTP; similar to E.coli PrmC; member of the seven beta-strand family","termid":"PBO:0087211"}


id: GO:0005824
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  {"annotated_genes":["SJAG_01188","SJAG_01464","SJAG_01215","SJAG_02737","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116548,106650,108418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061499"},{"annotations":[115073,92315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"outer plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005824","terms_by_termid":{"GO:0061499":null,"GO:0160065":null}}


id: GO:0090416
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nicotinate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8869603"],"termid":"GO:0090416"}


id: GO:0044721
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the cargo protein is released into the peroxisomal matrix, following translocation across the membrane.","definition_xrefs":["PMID:21976670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0007031"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0007031","GO:0006810"],"is_obsolete":false,"name":"protein import into peroxisome matrix, substrate release","termid":"GO:0044721"}


id: PBO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 1","termid":"PBO:0075303"}


id: GO:0044633
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, alternative pathway in another organism (obsolete GO:0044633)","synonyms":[{"name":"modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"regulation of complement activation, alternative pathway in other organism","type":"related"}],"termid":"GO:0044633"}


id: PBO:0116438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane magnesium transporter","termid":"PBO:0116438"}


id: PBO:0052960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase","termid":"PBO:0052960"}


id: PBO:0067966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 268","termid":"PBO:0067966"}


id: GO:0097500
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a receptor is transported to, or maintained in, a location within a non-motile cilium.","definition_xrefs":["PMID:23128241","GOC:kmv","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to non-motile cilium","termid":"GO:0097499"},{"relation_name":"is_a","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor localization to non-motile cilium","synonyms":[{"name":"receptor localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0097500"}


id: GO:0098655
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id: PBO:0040837
data:
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id: PR:Q1RKN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tlh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1RKN3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase tlh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.08c","synonyms":[{"name":"Spom972h-tlh2","type":"exact"},{"name":"Sub-telomeric helicase RecQ homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1RKN3"}


id: GO:0010804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"negative regulation of TNF signaling","type":"exact"},{"name":"negative regulation of TNF-mediated signaling pathway","type":"exact"},{"name":"negative regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0010804"}


id: PBO:0075089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 139","termid":"PBO:0075089"}


id: PBO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2","termid":"PBO:0045994"}


id: MONDO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An alopecia areata that involves diffuse loss of hair over the whole scalp.","definition_xrefs":["DOID:0060157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata","termid":"MONDO:0005340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse alopecia areata","secondary_identifiers":["MEDGEN:537915","SCTID:46586006","UMLS:C0263479","icd11.foundation:666274267","MESH:C531609"],"synonyms":[{"name":"Cazenave's vitiligo","type":"related"},{"name":"Celsus' vitiligo","type":"related"},{"name":"Jonston's alopecia","type":"related"},{"name":"alopecia celsi","type":"related"},{"name":"marginal alopecia","type":"related"},{"name":"patchy alopecia","type":"related"}],"termid":"MONDO:0000687","xrefs":{"Monarch":{"xref_id":"0000687"}}}


id: PBO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 37","termid":"PBO:0048326"}


id: SO:1000104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000104 sequence_variant_increasing_level_of_translation_product (obsolete SO:1000104)","synonyms":[{"name":"mutationt increasing level of translation product","type":"related"},{"name":"sequence variant increasing level of translation product","type":"exact"}],"termid":"SO:1000104"}


id: MONDO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital corneal opacities, cornea guttata, and corectopia","secondary_identifiers":["MESH:C563921","UMLS:C1837970","OMIM:608484","MEDGEN:324911"],"synonyms":[{"name":"congenital corneal opacities, cornea guttata, and corectopia","type":"exact"},{"name":"corneal opacities, congenital, with cornea guttata and corectopia","type":"related"}],"termid":"MONDO:0012046","xrefs":{"Monarch":{"xref_id":"0012046"}}}


id: MOD:00738
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iron atom or a cluster containing iron for hydrogen atoms, or that coordinates an iron ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron containing modified residue","synonyms":[{"name":"FeRes","type":"exact"}],"termid":"MOD:00738"}


id: PBO:0027574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027574"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: FYECO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ubiquinone Q6 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ubiquinone Q6","synonyms":[{"name":"coenzyme Q6 added","type":"exact"}],"termid":"FYECO:0000131"}


id: GO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide transport","termid":"GO:0090087"}


id: MONDO:0800402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the TRPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TRPM1-related retinopathy","termid":"MONDO:0800402","xrefs":{"Monarch":{"xref_id":"0800402"}}}


id: GO:0102728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha)-campestan-3-one + NADP = H+ + campest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102728)","termid":"GO:0102728"}


id: PR:O74446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif2 gene.","definition_xrefs":["UniProtKB:O74446","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.01","synonyms":[{"name":"Spom972h-sif2","type":"exact"},{"name":"sporulation protein sif2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74446"}


id: PBO:0028604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_xanthine_nitrogen_source","termid":"PBO:0028604"}


id: GO:0052898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1)-acetylspermidine + O2 = 1,3-diaminopropane + 4-acetamidobutanal + H2O2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N1-acetylspermidine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity (obsolete GO:0052898)","termid":"GO:0052898"}


id: PBO:0064239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCXD2 antisense RNA 1","termid":"PBO:0064239"}


id: PBO:0040014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMC2 antisense RNA 1","termid":"PBO:0040014"}


id: PBO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rhp51delta single mutant","termid":"PBO:0001350"}


id: PBO:0089962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated chaperone, zuotin","termid":"PBO:0089962"}


id: PBO:0068965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 209, pseudogene","termid":"PBO:0068965"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: MONDO:0009258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic galactosemia is a life-threatening metabolic disease with onset in the neonatal period. Infants usually develop feeding difficulties, lethargy, and severe liver disease.","definition_xrefs":["Orphanet:79239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005047","MONDO:0037792","MONDO:0005328"],"is_obsolete":false,"name":"classic galactosemia","secondary_identifiers":["GARD:13639","OMIM:230400","UMLS:C0268151","NANDO:1200851","NANDO:2200532","MEDGEN:82777","DOID:0111459","SCTID:10899004","icd11.foundation:2011000259"],"synonyms":[{"name":"GALT deficiency","type":"exact"},{"name":"Galt deficiency","type":"related"},{"name":"classic galactosemia","type":"exact"},{"name":"classical galactosemia, homozygous duarte-type","type":"narrow"},{"name":"galactose-1-phosphate uridyltransferase deficiency","type":"exact"},{"name":"galactose-1-phosphate uridylyltransferase deficiency","type":"related"},{"name":"galactosemia","type":"related"},{"name":"galactosemia type 1","type":"exact"},{"name":"galactosemia, Duarte variant","type":"related"},{"name":"galactosemia, classic","type":"related"},{"name":"transferase deficiency","type":"related"}],"termid":"MONDO:0009258","xrefs":{"Monarch":{"xref_id":"0009258"}}}


id: PR:P0CT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-7 gene.","definition_xrefs":["UniProtKB:P0CT42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-7 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D1.01c","synonyms":[{"name":"Spom972h-Tf2-7","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT42"}


id: GO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of eye pigmentation","termid":"GO:0048074"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"negatively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye pigmentation","synonyms":[{"name":"down regulation of eye pigmentation","type":"broad"},{"name":"down-regulation of eye pigmentation","type":"broad"},{"name":"downregulation of eye pigmentation","type":"broad"},{"name":"inhibition of eye pigmentation","type":"broad"},{"name":"negative regulation of eye pigmentation","type":"broad"}],"termid":"GO:0048077"}


id: GO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin D2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"prostaglandin D2 receptor binding","synonyms":[{"name":"prostaglandin D2 receptor ligand","type":"narrow"},{"name":"prostanoid DP receptor binding","type":"exact"}],"termid":"GO:0031863"}


id: PBO:0014615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, minor transcript","termid":"PBO:0014615"}


id: GO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagy process by which cytosolic proteins targeted for degradation are tagged with a chaperone and are directly transferred into and degraded in a late endosomal compartment.","definition_xrefs":["PMID:21238931","GOC:autophagy","GOC:dph","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"late endosomal microautophagy","secondary_identifiers":["Reactome:R-HSA-9615710"],"termid":"GO:0061738"}


id: GO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of viral glycoprotein metabolic process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation by host of viral process","termid":"GO:0044793"},{"relation_name":"is_a","term_name":"modulation by host of viral glycoprotein metabolic process","termid":"GO:0044870"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral glycoprotein metabolic process","termid":"GO:0044871"}


id: FYPO:0003989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate","termid":"FYPO:0002731"},{"relation_name":"is_a","term_name":"inviable stubby vegetative cell","termid":"FYPO:0002107"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable stubby mononucleate vegetative cell","synonyms":[{"name":"inviable stubby mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable stubby mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped mononucleate vegetative cell","type":"exact"},{"name":"lethal; stubby mononucleate vegetative cell","type":"exact"},{"name":"stubby mononucleate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0003989"}


id: MONDO:0045037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An opportunistic infection caused by a heterogeneous group of mitosporic fungi with clear (hyalo-) hyphae in the host. Common causative agents include acremonium; aspergillus; chrysosporium; fusarium; paecilomyces; penicillium; pseudallescheria; scedosporium; and scopulariopsis. Normally a dermatomycoses, it can become invasive in the immunocompromised host.","definition_xrefs":["MESH:D060605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyalohyphomycosis","secondary_identifiers":["SCTID:240773008","UMLS:C0343952","MEDGEN:452455"],"synonyms":[{"name":"hyalohyphomycosis","type":"exact"}],"termid":"MONDO:0045037","xrefs":{"Monarch":{"xref_id":"0045037"}}}


id: FYPO:0004983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to vorinostat. Cells stop growing (and may die) at a concentration of vorinostat that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to vorinostat","synonyms":[{"name":"hypersensitive to vorinostat","type":"exact"},{"name":"sensitive to N-hydroxy-N'-phenyloctanediamide","type":"exact"},{"name":"sensitive to SAHA","type":"exact"},{"name":"sensitive to suberoylanilide hydroxamic acid","type":"exact"},{"name":"sensitive to vorinostat during mitotic cell cycle","type":"related"},{"name":"sensitive to vorinostat during vegetative growth","type":"exact"}],"termid":"FYPO:0004983"}


id: PR:000027566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04909-1, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S121)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:2","type":"exact"},{"name":"histone H2A.1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S121)","type":"exact"},{"name":"hta1/Phos:(S122)","type":"exact"}],"termid":"PR:000027566"}


id: PBO:0051005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 3","termid":"PBO:0051005"}


id: GO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of glycosidic bonds through a beta-elimination reaction on alginate, a linear polysaccharide consisting of guluronate (G) and mannuronate (M) as the monomer constituents. An oligoalginate is a linear polymer of two, three or four units of (1->4)-alpha-L-guluronic acid and beta-D-mannuronic acid, releasing monosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["GOC:mengo_curators","PMID:20925655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"exo-oligoalginate lyase activity","secondary_identifiers":["EC:4.2.2.26"],"termid":"GO:0052764"}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: GO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP biosynthetic process (obsolete GO:0030819)","synonyms":[{"name":"activation of cAMP biosynthetic process","type":"narrow"},{"name":"positive regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"positive regulation of cAMP anabolism","type":"exact"},{"name":"positive regulation of cAMP biosynthesis","type":"exact"},{"name":"positive regulation of cAMP formation","type":"exact"},{"name":"positive regulation of cAMP synthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthetic process","type":"exact"},{"name":"stimulation of cAMP biosynthetic process","type":"narrow"},{"name":"up regulation of cAMP biosynthetic process","type":"exact"},{"name":"up-regulation of cAMP biosynthetic process","type":"exact"},{"name":"upregulation of cAMP biosynthetic process","type":"exact"}],"termid":"GO:0030819"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: GO:0003098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which blood volume is regulated due to a change in the rate of glomerular filtration. This is accomplished by a feedback mechanism that senses changes in the juxtaglomerular apparatus.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"},{"relation_name":"part_of","term_name":"regulation of glomerular filtration","termid":"GO:0003093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubuloglomerular feedback","secondary_identifiers":["Wikipedia:Tubuloglomerular_feedback"],"termid":"GO:0003098"}


id: PBO:0116290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly variable glycoprotein localized to cell wall via GPI anchor; serine/threonine rich and highly similar to HPF1 haze-protective mannoprotein; necessary and sufficient for haze-positive phenotype in brewing strains which correlates with an expansion in the N-terminal serine-rich region; transcript is induced in both high and low pH environments","termid":"PBO:0116290"}


id: GO:1990960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of basophils such that the total number of basophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil homeostasis","synonyms":[{"name":"basophilic leucocyte homeostasis","type":"exact"}],"termid":"GO:1990960"}


id: PBO:0079947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 2","termid":"PBO:0079947"}


id: PR:Q12238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q12238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.06c","synonyms":[{"name":"Spom972h-uvi31","type":"exact"}],"termid":"PR:Q12238"}


id: PBO:0073129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like 1 pseudogene 1","termid":"PBO:0073129"}


id: PBO:0075812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 1","termid":"PBO:0075812"}


id: GO:0032876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of DNA endoreduplication","termid":"GO:0032875"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA endoreduplication","synonyms":[{"name":"down regulation of DNA endoreduplication","type":"exact"},{"name":"down-regulation of DNA endoreduplication","type":"exact"},{"name":"downregulation of DNA endoreduplication","type":"exact"},{"name":"inhibition of DNA endoreduplication","type":"narrow"},{"name":"negative regulation of DNA endoreplication","type":"exact"},{"name":"negative regulation of DNA re-duplication","type":"exact"}],"termid":"GO:0032876"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: MONDO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A language disorder that involves an acquired impairment of any language modality such as producing or comprehending spoken or written language.","definition_xrefs":["DOID:0060046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aphasia","secondary_identifiers":["MESH:D001037","MEDGEN:8159","ICD10CM:R47.01","icd11.foundation:1167055901","UMLS:C0003537"],"termid":"MONDO:0000598","xrefs":{"Monarch":{"xref_id":"0000598"}}}


id: GO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of histones, including histone dimers, from nucleosomes within chromatin.","definition_xrefs":["PMID:17496903","PMID:21807128","GOC:krc","PMID:15525516"],"gene_count":0,"genotype_count":0,"name":"obsolete histone displacement (obsolete GO:0001207)","termid":"GO:0001207"}


id: MONDO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of cardiovascular system","secondary_identifiers":["DOID:0060051"],"synonyms":[{"name":"cardiovascular system autoimmune disease","type":"exact"},{"name":"cardiovascular system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000603","xrefs":{"Monarch":{"xref_id":"0000603"}}}


id: FYPO:0002885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to oxidative stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during cellular response to oxidative stress","synonyms":[{"name":"normal transcription during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal transcription during oxidative stress response","type":"exact"},{"name":"normal transcription in response to oxidative stress","type":"exact"}],"termid":"FYPO:0002885"}


id: GO:1902749
data:
  {"annotated_genes":["SJAG_02723","SJAG_01044","SJAG_04671","SJAG_03695","SJAG_00364","SJAG_01000","SJAG_01456","SJAG_01901","SJAG_04332","SJAG_03592","SJAG_00318","SJAG_01605","SJAG_01146","SJAG_02342","SJAG_03309","SJAG_02563","SJAG_02576","SJAG_00526","SJAG_02098","SJAG_03126","SJAG_02332","SJAG_05373","SJAG_03927","SJAG_03942","SJAG_06592","SJAG_00117","SJAG_04140","SJAG_02771","SJAG_04394","SJAG_04486","SJAG_01873","SJAG_02266","SJAG_01680","SJAG_03160","SJAG_04280","SJAG_00883","SJAG_01205","SJAG_04597","SJAG_01076","SJAG_03486","SJAG_02074","SJAG_03073","SJAG_00640","SJAG_01855","SJAG_04287","SJAG_01118","SJAG_02592","SJAG_00214","SJAG_00600","SJAG_03854","SJAG_02858","SJAG_00082","SJAG_01084","SJAG_03602","SJAG_03026","SJAG_01837","SJAG_03067","SJAG_01010","SJAG_01805","SJAG_00216","SJAG_00256","SJAG_02392","SJAG_01429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115659,106167,90902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[100964,93888,89459,100056,115605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[98866,111619,116713,100057,81307,76666,108886,74091,90903,98699,93440,72875,80715,116885,116408,115661,106170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[97934,94028,115607,95344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[81180,60765,74093,98868,111311,62305,90904,108887,100571,106171,116626,61476,88582,77022,67814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[92692,106202,106565,58732,93847,80372,111017,112067,93038,114067,104036,100516,60662,111401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[72443,80374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[101283,91612,93851,110782,91211,109916,93279,116278,75237,87507,98508,87498,108136,116089,93890,103018,72491,97935,106786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[100914,87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[75239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[111550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GOC:jl","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8852276"],"termid":"GO:1902749","terms_by_termid":{"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: MOD:00021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-lysine.","definition_xrefs":["ChEBI:29967","DeltaMass:0","PubMed:6120171","PubMed:3106962","RESID:AA0012","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine residue","synonyms":[{"name":"(2S)-2,6-diaminohexanoic acid","type":"exact"},{"name":"2,6-bis(azanyl)hexanoic acid","type":"exact"},{"name":"6-amino-L-norleucine","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with substrate","type":"exact"},{"name":"L-lysine","type":"exact"},{"name":"Lys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic acid","type":"exact"}],"termid":"MOD:00021"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["EC:1.1.1.228","RHEA:18329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03745","MetaCyc:+-SABINOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: PBO:0059122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 2","termid":"PBO:0059122"}


id: GO:1901753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene A4.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:23242647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene A4 metabolic process","termid":"GO:1901751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene A4 biosynthetic process","synonyms":[{"name":"LTA4 biosynthesis","type":"exact"},{"name":"eoxin A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 anabolism","type":"exact"},{"name":"leukotriene A4 biosynthesis","type":"exact"},{"name":"leukotriene A4 formation","type":"exact"},{"name":"leukotriene A4 synthesis","type":"exact"}],"termid":"GO:1901753"}


id: PBO:0064251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin 2","termid":"PBO:0064251"}


id: PBO:0058280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4657","termid":"PBO:0058280"}


id: MONDO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma type AB (obsolete MONDO:0002589)","termid":"MONDO:0002589","xrefs":{"Monarch":{"xref_id":"0002589"}}}


id: PBO:0089185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphate synthase Tps2","termid":"PBO:0089185"}


id: GO:1903528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dCDP biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"regulates","term_name":"dCDP biosynthetic process","termid":"GO:0006240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of dCDP biosynthetic process","synonyms":[{"name":"regulation of dCDP anabolism","type":"exact"},{"name":"regulation of dCDP biosynthesis","type":"exact"},{"name":"regulation of dCDP formation","type":"exact"},{"name":"regulation of dCDP synthesis","type":"exact"}],"termid":"GO:1903528"}


id: GO:0021682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve maturation","termid":"GO:0021682"}


id: FYPO:0003546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage","synonyms":[{"name":"increased number of DNA lesions","type":"related"},{"name":"increased spontaneous DNA lesions","type":"related"}],"termid":"FYPO:0003546"}


id: PBO:0049197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grid2 interacting protein","termid":"PBO:0049197"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: GO:1902727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle satellite cell proliferation","termid":"GO:1902723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth factor dependent skeletal muscle satellite cell proliferation","termid":"GO:1902727"}


id: PR:P78926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map1 gene.","definition_xrefs":["UniProtKB:P78926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone receptor transcription activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.06","synonyms":[{"name":"Spom972h-map1","type":"exact"},{"name":"protein map1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78926"}


id: PBO:0040499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 1","termid":"PBO:0040499"}


id: PR:Q10408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.03","synonyms":[{"name":"Spom972h-sro7","type":"exact"}],"termid":"PR:Q10408"}


id: PBO:0046610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 12","termid":"PBO:0046610"}


id: PBO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription related zf-ZZ type zinc finger protein","termid":"PBO:0003418"}


id: GO:0009828
data:
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id: MONDO:0001174
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id: GO:0047415
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id: SO:0005849
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id: GO:0008759
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id: GO:0051640
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id: GO:0034161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 8 signaling pathway","termid":"GO:0034159"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"positive regulation of TLR8 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034161"}


id: MONDO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia characterized by an inability to distinguish, name, or recognize the fingers","definition_xrefs":["Wikipedia:Finger_agnosia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finger agnosia","secondary_identifiers":["DOID:0060141","HP:0010525","UMLS:C0234509","MEDGEN:115960"],"synonyms":[{"name":"finger agnosia","type":"exact"},{"name":"finger agnosia (disease)","type":"exact"},{"name":"manual digit agnosia","type":"exact"}],"termid":"MONDO:0000671","xrefs":{"Monarch":{"xref_id":"0000671"}}}


id: PBO:0088858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga7","termid":"PBO:0088858"}


id: PBO:0066379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIG-I dependent antiviral response regulator RNA","termid":"PBO:0066379"}


id: GO:1905347
data:
  {"annotated_genes":["SJAG_00623","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81090,76102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endodeoxyribonuclease activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:18413719","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endodeoxyribonuclease complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"}],"termid":"GO:1905347","terms_by_termid":{"GO:0048476":null}}


id: MONDO:0009357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeroradial synostosis","termid":"MONDO:0007737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humeroradial synostosis with craniofacial anomalies","secondary_identifiers":["MESH:C566888","UMLS:C1968717","OMIM:236410","MEDGEN:369834"],"synonyms":[{"name":"humeroradial synostosis with craniofacial anomalies","type":"exact"}],"termid":"MONDO:0009357","xrefs":{"Monarch":{"xref_id":"0009357"}}}


id: PBO:0091565
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Like Protein","termid":"PBO:0091565"}


id: PR:Q9UU86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xenotropic and polytropic retrovirus receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05053","PANTHER:PTHR10783:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein SYG1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.07c","secondary_identifiers":["UniProtKB:Q9UU86"],"synonyms":[{"name":"Spom972h-XPR1","type":"exact"}],"termid":"PR:Q9UU86"}


id: MONDO:1011771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial coronoid disease, non-human animal","secondary_identifiers":["OMIA:001863"],"termid":"MONDO:1011771","xrefs":{"Monarch":{"xref_id":"1011771"}}}


id: MONDO:0018810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal hydranencephaly-diaphragmatic hernia syndrome is a rare, genetic, lethal, multiple congenital anomalies syndrome characterized by hydranencephaly and diaphragmatic hernia, as well as macrocephaly, a widely open anterior fontanel, scaphoid abdomen and hypotonia. Additionally, congenital heart defects, polyhydramnios and pulmonary hypertension have also been associated.","definition_xrefs":["Orphanet:480528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal hydranencephaly-diaphragmatic hernia syndrome","secondary_identifiers":["GARD:21978","UMLS:C5567527","MEDGEN:1798950"],"termid":"MONDO:0018810","xrefs":{"Monarch":{"xref_id":"0018810"}}}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway (obsolete GO:0010578)","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: PBO:0027608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bis(5'-nucleosyl)-tetraphosphatase_(asymmetrical)_activity","termid":"PBO:0027608"}


id: FYPO:0006579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manganese. Cells stop growing (and may die) at a concentration of manganese ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to manganese","synonyms":[{"name":"hypersensitive to manganese","type":"exact"},{"name":"sensitive to manganese during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese during vegetative growth","type":"exact"},{"name":"sensitive to manganese ions","type":"exact"}],"termid":"FYPO:0006579"}


id: MONDO:0032697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"Houge-Janssens syndrome","termid":"MONDO:0957553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Houge-Janssens syndrome 3","secondary_identifiers":["MEDGEN:1677130","UMLS:C5193048","OMIM:618354"],"synonyms":[{"name":"NEDLBA","type":"exact"},{"name":"neurodevelopmental disorder and language delay with or without structural brain abnormalities","type":"exact"}],"termid":"MONDO:0032697","xrefs":{"Monarch":{"xref_id":"0032697"}}}


id: MONDO:0014237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the SYNE4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 76","secondary_identifiers":["UMLS:C3147083","GARD:22650","DOID:0110524","MEDGEN:811137","OMIM:615540"],"synonyms":[{"name":"DFNB76","type":"narrow"},{"name":"SYNE4 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in SYNE4","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 76","type":"exact"},{"name":"deafness, autosomal recessive 76","type":"narrow"},{"name":"deafness, autosomal recessive type 76","type":"narrow"}],"termid":"MONDO:0014237","xrefs":{"Monarch":{"xref_id":"0014237"}}}


id: MONDO:0968983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 6","secondary_identifiers":["UMLS:C5935614","OMIM:620796","MEDGEN:1857440"],"termid":"MONDO:0968983","xrefs":{"Monarch":{"xref_id":"0968983"}}}


id: GO:0043945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"positive regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0045881"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:3350800","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: FYPO:0001317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"},{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during vegetative growth","secondary_identifiers":["FYPO:0002938"],"synonyms":[{"name":"normal RNA level during mitotic cell cycle","type":"related"},{"name":"normal cellular RNA level during vegetative growth","type":"exact"},{"name":"normal mRNA accumulation","type":"related"},{"name":"normal mRNA level during mitotic cell cycle","type":"related"},{"name":"normal mRNA level during vegetative growth","type":"narrow"},{"name":"normal mRNA transcript level during vegetative growth","type":"narrow"},{"name":"normal transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0001317"}


id: MONDO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary laryngeal lymphangioma is a rare, benign, congenital malformation of the lymphatic system characterized by a polypoidal, variable-sized, soft tissue mass located in the larynx. Most lesions manifest by the 2nd year of life and, depending on the size, patients may present with changes in voice, dysphagia, stridor, airway obstruction and/or respiratory distress. Cystic hygroma of the neck is frequently associated.","definition_xrefs":["Orphanet:137926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary laryngeal lymphangioma","secondary_identifiers":["MEDGEN:1634144","UMLS:C4706521","SCTID:763617006","GARD:19891"],"termid":"MONDO:0015314","xrefs":{"Monarch":{"xref_id":"0015314"}}}


id: GO:0009422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the bacterial-type flagellum where the hook and filament meet.","definition_xrefs":["PMID:10572114","PMID:12624192","GOC:cilia","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum hook-filament junction","synonyms":[{"name":"flagellar hook-filament junction","type":"exact"}],"termid":"GO:0009422"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0067207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 272, pseudogene","termid":"PBO:0067207"}


id: PBO:0067341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 435, pseudogene","termid":"PBO:0067341"}


id: GO:0034306
data:
  {"annotated_genes":["SJAG_04140","SJAG_04853","SJAG_02169","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[101816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[91661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation from the products of meiosis. An example of this is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sexual sporulation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"},{"name":"regulation of meiotic spore formation","type":"exact"},{"name":"regulation of meiotic sporulation","type":"exact"},{"name":"regulation of sexual spore formation","type":"exact"}],"termid":"GO:0034306","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde2 (predicted)","termid":"PBO:0016946"}


id: MONDO:0011782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small breaks in the elastin-filled tissue of the retina.","definition_xrefs":["MESH:D000793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angioid streaks","secondary_identifiers":["UMLS:C0002982","DOID:13401","OMIM:607140","EFO:1000805","MedDRA:10066191","MEDGEN:1541"],"synonyms":[{"name":"angioid streaks","type":"exact"}],"termid":"MONDO:0011782","xrefs":{"Monarch":{"xref_id":"0011782"}}}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: PBO:0040411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a1","termid":"PBO:0040411"}


id: GO:0004247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Pro-Phe and Ala-Ala bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete saccharolysin activity (obsolete GO:0004247)","synonyms":[{"name":"oligopeptidase yscD activity","type":"narrow"},{"name":"proteinase yscD activity","type":"narrow"},{"name":"saccharolysin activity","type":"exact"},{"name":"saccharomyces cerevisiae proteinase yscD","type":"related"},{"name":"yeast cysteine proteinase D activity","type":"narrow"}],"termid":"GO:0004247"}


id: PBO:0054378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1774","termid":"PBO:0054378"}


id: PBO:0063254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 1","termid":"PBO:0063254"}


id: PBO:0054648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2053","termid":"PBO:0054648"}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: GO:1990956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a fibroblast guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:8760137","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast chemotaxis","termid":"GO:1990956"}


id: PBO:0040199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 12","termid":"PBO:0040199"}


id: GO:1905655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery smooth muscle contraction.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:27389411","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle contraction","termid":"GO:1904694"},{"relation_name":"is_a","term_name":"regulation of artery smooth muscle contraction","termid":"GO:1905654"},{"relation_name":"negatively_regulates","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery smooth muscle contraction","synonyms":[{"name":"down regulation of artery smooth muscle contraction","type":"exact"},{"name":"down-regulation of artery smooth muscle contraction","type":"exact"},{"name":"downregulation of artery smooth muscle contraction","type":"exact"},{"name":"inhibition of artery smooth muscle contraction","type":"narrow"}],"termid":"GO:1905655"}


id: GO:0008112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinamide = 1-methylnicotinamide + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:23884","EC:2.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nicotinamide N-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5359451","MetaCyc:NICOTINAMIDE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01269"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinamide N-methyltransferase activity","type":"related"},{"name":"nicotinamide methyltransferase activity","type":"related"}],"termid":"GO:0008112"}


id: PBO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp0 (predicted)","termid":"PBO:0005714"}


id: PBO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036218"}


id: PBO:0028984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028984"}


id: PBO:0065494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 3","termid":"PBO:0065494"}


id: GO:0048289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to IgE biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgE constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:2113175","PMID:9186655","ISBN:0781735149","PMID:12370374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"isotype switching to IgE isotypes","synonyms":[{"name":"class switch recombination to IgE isotypes","type":"exact"},{"name":"class switching to IgE isotypes","type":"exact"},{"name":"isotype switch recombination to IgE isotypes","type":"exact"}],"termid":"GO:0048289"}


id: GO:1901292
data:
  {"annotated_genes":["SJAG_04870","SJAG_02107","SJAG_03091","SJAG_02796","SJAG_01595","SJAG_02135","SJAG_01310","SJAG_00461","SJAG_01055","SJAG_01974","SJAG_02369","SJAG_03903","SJAG_03977","SJAG_02247","SJAG_03828","SJAG_02481","SJAG_04939","SJAG_04169","SJAG_00685","SJAG_03373","SJAG_00027","SJAG_04334","SJAG_03676","SJAG_04048","SJAG_02945","SJAG_02785","SJAG_03660","SJAG_04495","SJAG_06621","SJAG_02009","SJAG_00839","SJAG_05314","SJAG_06622","SJAG_04487","SJAG_04192","SJAG_03797","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[115981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[108962,108963,108967,104999,97500,97771,108964,108965,102911,79617,105000,74194,105371,115952,105370,108966,103169,94013,105001,108961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[79807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[70498,77547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[62628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[81046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[81045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[116698,111031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[98497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[81277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[88062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[74154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[74846,77912],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[72270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[71770],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[112903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[78225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside phosphate.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"nucleobase-containing compound catabolic process","termid":"GO:0034655"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01055":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_01974":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03797":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleoside phosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nucleoside phosphate breakdown","type":"exact"},{"name":"nucleoside phosphate catabolism","type":"exact"},{"name":"nucleoside phosphate degradation","type":"exact"}],"termid":"GO:1901292","terms_by_termid":{"GO:0006110":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0009134":null,"GO:0009159":null,"GO:0009191":null,"GO:0009204":null,"GO:0015938":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: PBO:0111651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex and Lid2 complex subunit, Dpy-30 domain Sdc1","termid":"PBO:0111651"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["GO:0071998","PMID:16751704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"accelerated ascospore release from ascus","type":"related"},{"name":"advanced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004534"}


id: PBO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, galactose-specific flocculin Gsf2","termid":"PBO:0036523"}


id: PBO:0041872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cas scaffold protein family member 4","termid":"PBO:0041872"}


id: GO:1905211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8760137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"},{"relation_name":"negatively_regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast chemotaxis","synonyms":[{"name":"down regulation of fibroblast chemotaxis","type":"exact"},{"name":"down-regulation of fibroblast chemotaxis","type":"exact"},{"name":"downregulation of fibroblast chemotaxis","type":"exact"},{"name":"inhibition of fibroblast chemotaxis","type":"narrow"}],"termid":"GO:1905211"}


id: PBO:0041965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 8","termid":"PBO:0041965"}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: PBO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5B","termid":"PBO:0052355"}


id: PBO:0073074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 3","termid":"PBO:0073074"}


id: PBO:0041494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 50","termid":"PBO:0041494"}


id: FYPO:0000127
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coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01205","SJAG_01680"],"name":"increased sensitivity to chemical during vegetative growth","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:27678009":null,"PMID:31150379":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_01680","SJAG_01205","SJAG_01787","SJAG_02527","SJAG_04671","SJAG_01605","SJAG_02592","SJAG_05207","SJAG_04287","SJAG_00266","SJAG_01410","SJAG_04312","SJAG_00364","SJAG_04551","SJAG_00610","SJAG_00429","SJAG_04697"],"single_locus_genotype_uniquenames":["rad26delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","chk1delta","rad51delta","pka1delta","cmp7delta","crb2delta","rad9delta","atf1delta","pmk1delta","sty1delta","mrc1delta","rad3delta","pck2delta","gms1delta","pck1delta","cds1delta"],"synonyms":[{"name":"increased sensitivity to chemical during mitotic cell cycle","type":"related"},{"name":"resistance to chemicals: decreased during vegetative growth","type":"exact"}],"termid":"FYPO:0000127","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000079":null,"FYPO:0000085":null,"FYPO:0000087":null,"FYPO:0000088":null,"FYPO:0000097":null,"FYPO:0000106":null,"FYPO:0000107":null,"FYPO:0000714":null,"FYPO:0000841":null,"FYPO:0001214":null,"FYPO:0007522":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MOD:00332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glucosyl-arginine.","definition_xrefs":["RESID:AA0327","Unimod:41#R","PubMed:15279557","PubMed:8521968","PubMed:9536051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"omega-N-glycosyl-L-arginine","termid":"MOD:01980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"omega-N-glucosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc) arginine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:00332"}


id: PBO:0089116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2 methyltransferase Efm3","termid":"PBO:0089116"}


id: PBO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 27","termid":"PBO:0070528"}


id: GO:0033902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 28S rRNA containing guanosine-adenosine pair + H2O = an [RNA fragment]-3'-adenosine-3'-phosphate + a 5'-a hydroxy-guanosine-3'-[RNA fragment].","definition_xrefs":["EC:4.6.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rRNA endonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.10-RXN"],"synonyms":[{"name":"alpha-sarcin","type":"related"}],"termid":"GO:0033902"}


id: GO:0106047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylpolyamine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine deacetylation","termid":"GO:0106047"}


id: PBO:0047417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 8","termid":"PBO:0047417"}


id: MONDO:0016828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital autosomal recessive sideroblastic anemia (ARSA) is a non-syndromic, microcytic/hypochromic sideroblastic anemia, present from early infancy and characterized by severe microcytic anemia, which is not pyridoxine responsive, and increased serum ferritin.","definition_xrefs":["Orphanet:260305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive sideroblastic anemia","secondary_identifiers":["MEDGEN:895586","UMLS:C4274077","GARD:17240","SCTID:717050005"],"synonyms":[{"name":"ARSA","type":"exact"},{"name":"congenital sideroblastic anaemia","type":"broad"},{"name":"congenital sideroblastic anemia","type":"broad"},{"name":"sideroblastic anemia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016828","xrefs":{"Monarch":{"xref_id":"0016828"}}}


id: MONDO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by major seizures, dysmorphic features (round face, bulbous nose, wide mouth, prominent philtrum), pes planus, psychomotor retardation and obesity. It has been described in five children (three boys and two girls, one of whom died in infancy) from two unrelated Mexican families. This condition is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hernández-Aguirre Negrete syndrome","secondary_identifiers":["SCTID:721146009","UMLS:C2931736","MESH:C538112","GARD:3491","MEDGEN:419481"],"synonyms":[{"name":"Ehlers-Danlos syndrome with progeroid facies and mild intellectual disability","type":"related"},{"name":"Ehlers-Danlos syndrome with progeroid facies and mild mental retardation","type":"related"},{"name":"intellectual disability-epilepsy-bulbous nose syndrome","type":"exact"}],"termid":"MONDO:0016290","xrefs":{"Monarch":{"xref_id":"0016290"}}}


id: PBO:0087005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); stimulates the intrinsic GTPase activity of Rho1p, which plays a bud growth by regulating actin cytoskeleton organization and cell wall biosynthesis, resulting in the downregulation of Rho1p; structurally and functionally related to Sac7p; BAG7 has a paralog, SAC7, that arose from the whole genome duplication","termid":"PBO:0087005"}


id: PBO:0090038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sfp1","termid":"PBO:0090038"}


id: PBO:0039428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 8","termid":"PBO:0039428"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: PBO:0073039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 2","termid":"PBO:0073039"}


id: MONDO:1012901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the FA2H gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, FA2H-related, cattle","secondary_identifiers":["OMIA:002450-9913"],"synonyms":[{"name":"ichthyosis congenita, cattle","type":"related"}],"termid":"MONDO:1012901","xrefs":{"Monarch":{"xref_id":"1012901"}}}


id: GO:0098798
data:
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protein complex that is part of a mitochondrion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing 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protein-containing complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mitochondrial protein complex","type":"related"}],"termid":"GO:0098798","terms_by_termid":{"GO:0001401":null,"GO:0001405":null,"GO:0005742":null,"GO:0005744":null,"GO:0005745":null,"GO:0005760":null,"GO:0005762":null,"GO:0005763":null,"GO:0017087":null,"GO:0031942":null,"GO:0032478":null,"GO:0032865":null,"GO:0034245":null,"GO:0036266":null,"GO:0042719":null,"GO:0042720":null,"GO:0042721":null,"GO:0061617":null,"GO:0061671":null,"GO:0099128":null,"GO:0120510":null,"GO:0140275":null,"GO:0140595":null,"GO:1990524":null}}


id: MONDO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe or complete loss of motor function on one side of the body. This condition is usually caused by brain diseases that are localized to the cerebral hemisphere opposite to the side of weakness. Less frequently, brain stem lesions; cervical spinal cord diseases; peripheral nervous system diseases; and other conditions may manifest as hemiplegia. The term hemiparesis (see paresis) refers to mild to moderate weakness involving one side of the body.","definition_xrefs":["MESH:D006429"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiplegia","secondary_identifiers":["MEDGEN:9196","icd11.foundation:1641958762","EFO:0009453","SCTID:1593000","UMLS:C0018991","ICD9:343.4","DOID:10969"],"synonyms":[{"name":"infantile hemiplegia","type":"exact"},{"name":"postnatal infantile hemiplegia","type":"exact"}],"termid":"MONDO:0001170","xrefs":{"Monarch":{"xref_id":"0001170"}}}


id: MONDO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drug- or toxin-induced pulmonary arterial hypertension (PAH) is a form of pulmonary arterial hypertension (PAH) secondary to the exposition to drugs. Drug- or toxin-induced PAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. Drug or toxin induced PAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug- or toxin-induced pulmonary arterial hypertension","secondary_identifiers":["UMLS:C0340544","MEDGEN:573792","EFO:0009192","GARD:21026"],"synonyms":[{"name":"drug- or toxin-induced PAH","type":"exact"}],"termid":"MONDO:0017149","xrefs":{"Monarch":{"xref_id":"0017149"}}}


id: PBO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKA","termid":"PBO:0002270"}


id: GO:0140878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of griseofulvin, an important antifungal drug that has been in use for a long time for treating dermatophyte infections.","definition_xrefs":["PMID:20534346","PMID:23978092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"griseofulvin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7653"],"synonyms":[{"name":"griseofulvin anabolism","type":"exact"},{"name":"griseofulvin biosynthesis","type":"exact"},{"name":"griseofulvin formation","type":"exact"},{"name":"griseofulvin synthesis","type":"exact"}],"termid":"GO:0140878"}


id: PBO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 6","termid":"PBO:0042400"}


id: PBO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT homolog 1","termid":"PBO:0003304"}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: PBO:0084858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for mitochondrial genome integrity, respiratory growth, and mitochondrial redox homeostasis, partially overlaps verified gene YPR099C","termid":"PBO:0084858"}


id: PBO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1716 family protein","termid":"PBO:0002784"}


id: PBO:0078231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 13","termid":"PBO:0078231"}


id: PBO:0068874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 114, pseudogene","termid":"PBO:0068874"}


id: PR:P31406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00670","PRO:DNx","PANTHER:PTHR15184:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.05","secondary_identifiers":["UniProtKB:P31406"],"synonyms":[{"name":"Spom972h-ATP6V1A","type":"exact"},{"name":"V-ATPase 67 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31406"}


id: MONDO:0014839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, childhood-onset, with psychomotor retardation","secondary_identifiers":["MEDGEN:934754","OMIM:616939","UMLS:C4310787"],"synonyms":[{"name":"COCPMR","type":"exact"},{"name":"chorea, childhood-onset, with psychomotor retardation","type":"exact"},{"name":"chorea, childhood-onset, with psychomotor retardation; COCPMR","type":"exact"}],"termid":"MONDO:0014839","xrefs":{"Monarch":{"xref_id":"0014839"}}}


id: PBO:0039202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 5","termid":"PBO:0039202"}


id: SO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the length of one or more sequence features.","direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_length_variant","synonyms":[{"name":"sequence length variant","type":"exact"}],"termid":"SO:0002160"}


id: PBO:0084025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyoxylate reductase; null mutation results in increased biomass after diauxic shift; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084025"}


id: PR:O13971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar MIF4G domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of glycerol defect protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.11","secondary_identifiers":["UniProtKB:O13971"],"synonyms":[{"name":"Spom972h-NOM1","type":"exact"}],"termid":"PR:O13971"}


id: GO:1900141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"regulation of oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:1900141"}


id: PBO:0076046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 1","termid":"PBO:0076046"}


id: PBO:0070193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 115 pseudogene","termid":"PBO:0070193"}


id: GO:0106218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the exopolysaccharide galactosaminogalactan. GAG is a heteropolysaccharide composed of alpha-1,4 linked galactose, N-acetyl galactosamine (GalNAc) and galactosamine (GalN).","definition_xrefs":["PMID:26492565","PMID:27048799","PMID:26932183","PMID:30667338","PMID:22102815","PMID:24257745","PMID:173713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"galactosaminogalactan biosynthetic process","synonyms":[{"name":"GAG biosynthetic process","type":"related"},{"name":"galactosaminogalactan anabolism","type":"related"},{"name":"galactosaminogalactan biosynthesis","type":"related"},{"name":"galactosaminogalactan formation","type":"related"},{"name":"galactosaminogalactan synthesis","type":"related"}],"termid":"GO:0106218"}


id: MONDO:0019372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary bone cyst is a benign non-epithelial bone cavity that is asymptomatic and that is found most commonly in the second decade of life by chance. The long bones are most often affected, but cases involving the jaw bone have been reported.","definition_xrefs":["Orphanet:83468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary bone cyst","secondary_identifiers":["MEDGEN:2696","ICD9:733.21","icd11.foundation:987501456","MESH:D001845","SCTID:203467005","NCIT:C2904","UMLS:C0005937","GARD:19039","ICD10CM:M85.4"],"synonyms":[{"name":"bone cyst","type":"exact"},{"name":"cyst of bone","type":"exact"},{"name":"cyst of the bone","type":"exact"},{"name":"simple bone cyst","type":"exact"},{"name":"solitary cyst","type":"exact"},{"name":"unicameral bone cyst","type":"exact"}],"termid":"MONDO:0019372","xrefs":{"Monarch":{"xref_id":"0019372"}}}


id: PBO:0065196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 8","termid":"PBO:0065196"}


id: PBO:0039235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminolevulinate dehydratase","termid":"PBO:0039235"}


id: PBO:0081688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 609","termid":"PBO:0081688"}


id: MONDO:0020854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Liddle syndrome in which the cause of the disease is a mutation in the SCNN1G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Liddle syndrome","termid":"MONDO:0008323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Liddle syndrome 2","secondary_identifiers":["OMIM:618114","MEDGEN:1648476","UMLS:C4748251"],"synonyms":[{"name":"LIDLS2","type":"exact"},{"name":"Liddle syndrome 2","type":"exact"},{"name":"Liddle syndrome caused by mutation in SCNN1G","type":"exact"},{"name":"SCNN1G Liddle syndrome","type":"exact"}],"termid":"MONDO:0020854","xrefs":{"Monarch":{"xref_id":"0020854"}}}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: GO:0097650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An incomplete microtubule containing 10 protofilaments that fuses with a complete microtubule called A tubule (containing 13 protofilaments) to form an axonemal outer doublet.","definition_xrefs":["ISBN:0716731363","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"B axonemal microtubule","synonyms":[{"name":"B tubule","type":"broad"}],"termid":"GO:0097650"}


id: MONDO:0005935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete reactive arthritis (obsolete MONDO:0005935)","termid":"MONDO:0005935","xrefs":{"Monarch":{"xref_id":"0005935"}}}


id: GO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process occurring in the host cell that contributes to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host cellular process involved in virus induced gene silencing (obsolete GO:0060144)","termid":"GO:0060144"}


id: GO:0032347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"aldosterone biosynthetic process","termid":"GO:0032342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of aldosterone biosynthetic process","termid":"GO:0032347"}


id: PBO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingoid long chain base kinase (predicted)","termid":"PBO:0001608"}


id: PR:O42877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fcf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fcf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.15c","synonyms":[{"name":"Spom972h-fcf2","type":"exact"}],"termid":"PR:O42877"}


id: PBO:0054499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1899","termid":"PBO:0054499"}


id: MONDO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises from the small intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"small intestine lymphoma","secondary_identifiers":["DOID:13996","ICD9:202.80","MEDGEN:82986","NCIT:C4007","SCTID:449074003","UMLS:C0278805"],"synonyms":[{"name":"lymphoma of small bowel","type":"exact"},{"name":"lymphoma of small intestine","type":"exact"},{"name":"lymphoma of the small bowel","type":"exact"},{"name":"lymphoma of the small intestine","type":"exact"},{"name":"primary small intestinal lymphoma","type":"exact"},{"name":"small bowel lymphoma","type":"exact"},{"name":"small intestinal lymphoma","type":"exact"},{"name":"small intestine lymphoma","type":"exact"}],"termid":"MONDO:0001852","xrefs":{"Monarch":{"xref_id":"0001852"}}}


id: PR:P05501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19271:SF0","PRO:DNx","OMA:SCHPO05077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.05","secondary_identifiers":["UniProtKB:P05501"],"synonyms":[{"name":"Spom972h-MT-CYB","type":"exact"},{"name":"complex III subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome b subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05501"}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: PBO:0065665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N2","termid":"PBO:0065665"}


id: GO:0010477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sulfur dioxide (SO2) stimulus.","definition_xrefs":["PMID:17425719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sulfur dioxide","termid":"GO:0010477"}


id: PBO:0052911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-3","termid":"PBO:0052911"}


id: GO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dms","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"negatively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein glycosylation","synonyms":[{"name":"negative regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060051"}


id: MONDO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the spinal cord.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of spinal cord","secondary_identifiers":["MEDGEN:56329","NCIT:C3627","ICD10CM:D33.4","icd11.foundation:1588169218","UMLS:C0154034","ICD9:225.3","SCTID:92405007"],"synonyms":[{"name":"benign neoplasm of the spinal cord","type":"exact"},{"name":"benign spinal cord neoplasm","type":"exact"},{"name":"benign spinal cord tumor","type":"exact"},{"name":"benign spinal cord tumour","type":"exact"},{"name":"benign tumor of spinal cord","type":"exact"},{"name":"benign tumor of the spinal cord","type":"exact"},{"name":"benign tumour of spinal cord","type":"exact"},{"name":"benign tumour of the spinal cord","type":"exact"},{"name":"spinal cord benign neoplasm","type":"exact"},{"name":"spinal cord neoplasm, benign","type":"exact"}],"termid":"MONDO:0021506","xrefs":{"Monarch":{"xref_id":"0021506"}}}


id: PBO:0058658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6786","termid":"PBO:0058658"}


id: GO:0050542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to icosanoids, any C20 polyunsaturated fatty acids or their derivatives, including the leukotrienes and the prostanoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"icosanoid binding","synonyms":[{"name":"eicosanoid binding","type":"exact"}],"termid":"GO:0050542"}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: PBO:0028144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0028144"}


id: GO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosome","secondary_identifiers":["Wikipedia:Glycosome"],"termid":"GO:0020015"}


id: GO:0071173
data:
  {"annotated_genes":["SJAG_02451","SJAG_01297","SJAG_01082","SJAG_04699","SJAG_01837","SJAG_01679","SJAG_01330","SJAG_03126","SJAG_03681","SJAG_03353","SJAG_04126","SJAG_04999","SJAG_03327","SJAG_02169","SJAG_04259","SJAG_00883","SJAG_04884","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107814,115502,99099,106784,103422,113868,111544,90188,113375],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105867,114095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116273,77147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109478,114098,101323,115159,105869,98941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[93677],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[113380],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116280],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[100863],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072486"],"synonyms":[{"name":"SAC","type":"broad"},{"name":"signal transduction involved in spindle assembly checkpoint","type":"exact"},{"name":"spindle assembly checkpoint","type":"exact"}],"termid":"GO:0071173","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0089224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf21","termid":"PBO:0089224"}


id: PBO:0077873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase","termid":"PBO:0077873"}


id: PBO:0082833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; binds RNA via its C-terminal domain; homologous to mammalian Bop1","termid":"PBO:0082833"}


id: MONDO:0004677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial mycosis that is a superficial fungal infection of the skin characterized by brown to black macules which usually occur on the palmar aspects of hands and occasionally the plantar and other surfaces of the skin, caused by Hortaea werneckii, which is a common saprophytic fungus believed to occur in soil, compost, humus and on wood in humid tropical and sub-tropical regions.","definition_xrefs":["DOID:8912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial mycosis","termid":"MONDO:0024268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tinea nigra","secondary_identifiers":["MEDGEN:508865","ICD9:111.1","SCTID:183342005","icd11.foundation:1723085409","UMLS:C0152067","ICD10CM:B36.1"],"synonyms":[{"name":"Tinea palmaris nigra","type":"exact"},{"name":"infection by Cladosporium werneckii","type":"exact"},{"name":"keratomycosis nigricans","type":"exact"},{"name":"microsporosis nigra","type":"related"}],"termid":"MONDO:0004677","xrefs":{"Monarch":{"xref_id":"0004677"}}}


id: FYPO:0006036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more monomeric ribosomes (80S monosomes) in the cytosol than normal.","definition_xrefs":["PomBase:mah","PMID:10462529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at increased level","type":"exact"},{"name":"increased cytosolic 80S monosome level","type":"exact"},{"name":"increased cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"increased cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"increased cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"increased cytosolic ribosome level","type":"broad"},{"name":"increased level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006036"}


id: PBO:0051011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 1 receptor","termid":"PBO:0051011"}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: GO:0038002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where an endocrine hormone is transported from the signal-producing cell to the receiving cell via the circulatory system (via blood, lymph or cerebrospinal fluid). The signaling cell and the receiving cell are often distant to each other.","definition_xrefs":["ISBN:3527303782","GOC:mtg_signaling_feb11","ISBN:0199264678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocrine signaling","synonyms":[{"name":"endocrine signalling","type":"exact"}],"termid":"GO:0038002"}


id: PBO:0085084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0085084"}


id: PBO:0044622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 1","termid":"PBO:0044622"}


id: PBO:0041466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 126","termid":"PBO:0041466"}


id: GO:2000217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"regulation of colony morphology","type":"related"}],"termid":"GO:2000217"}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: PBO:0044380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP1B1 antisense RNA 1","termid":"PBO:0044380"}


id: SO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The promoter of a cryptic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"},{"relation_name":"part_of","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_promoter","synonyms":[{"name":"cryptic promoter","type":"exact"}],"termid":"SO:0002310"}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: PBO:0074773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3F","termid":"PBO:0074773"}


id: PBO:0089523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Obg family, involved in cytoplasmic translation Rbg1","termid":"PBO:0089523"}


id: PR:O74910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- raf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1-associated factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.12c","synonyms":[{"name":"De-localization of swi6 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-raf1","type":"exact"},{"name":"cryptic loci regulator 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74910"}


id: PBO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts with SUPT6H, CTD assembly factor 1","termid":"PBO:0051971"}


id: GO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["GOC:mah","PMID:18234669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan biosynthetic process","termid":"GO:0046354"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"},{"relation_name":"is_a","term_name":"beta-1,2-oligomannoside metabolic process","termid":"GO:0070135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085","GO:0005975"],"is_obsolete":false,"name":"beta-1,2-oligomannoside biosynthetic process","synonyms":[{"name":"beta-1,2-oligomannoside anabolism","type":"exact"},{"name":"beta-1,2-oligomannoside biosynthesis","type":"exact"},{"name":"beta-1,2-oligomannoside formation","type":"exact"},{"name":"beta-1,2-oligomannoside synthesis","type":"exact"}],"termid":"GO:0070136"}


id: GO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone remodeling, the processes of bone formation and resorption that combine to maintain skeletal integrity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone remodeling","synonyms":[{"name":"regulation of bone remodelling","type":"exact"}],"termid":"GO:0046850"}


id: MONDO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CHARGE syndrome is a multiple congenital anomaly syndrome characterized by the variable combination of multiple anomalies, mainly Coloboma; Choanal atresia/stenosis; Cranial nerve dysfunction; Characteristic ear anomalies (known as the major 4 C's).","definition_xrefs":["Orphanet:138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"CHARGE syndrome","secondary_identifiers":["DOID:0050834","icd11.foundation:52086532","UMLS:C0265354","GARD:29","MedDRA:10064063","MESH:D058747","NANDO:1200464","MEDGEN:75567","NANDO:2200972","NCIT:C75100","NORD:920","SCTID:47535005","ICD9:759.89","OMIM:214800"],"synonyms":[{"name":"CHARGE association","type":"exact"},{"name":"CHARGE syndrome","type":"exact"},{"name":"Charge association--coloboma, heart anomaly, choanal atresia, retardation, genital and Ear anomalies","type":"related"},{"name":"Hall-Hittner syndrome","type":"exact"},{"name":"coloboma, heart anomaly, choanal atresia, retardation, genital and ear anomalies","type":"related"},{"name":"coloboma, heart defects, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear anomalies association","type":"exact"},{"name":"coloboma, heart malformation, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear malformations (CHARGE) association","type":"exact"},{"name":"coloboma-heart defects-atresia choanae-retardation of growth and development-genitourinary problems-ear abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008965","xrefs":{"Monarch":{"xref_id":"0008965"}}}


id: PBO:0049712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1","termid":"PBO:0049712"}


id: PBO:0059862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoregulin","termid":"PBO:0059862"}


id: PBO:0004408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7 (predicted)","termid":"PBO:0004408"}


id: PBO:0075567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor","termid":"PBO:0075567"}


id: FYPO:0005709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"normal protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"normal protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"normal protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0005709"}


id: MONDO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-microcornea syndrome, Seemanova type is characterized by microcephaly and brachycephaly, eye anomalies (microphthalmia, microcornea, congenital cataract), hypogenitalism, severe intellectual deficit, growth retardation and progressive spasticity. It has been described in two patients (a male and his sister's son). Both patients also presented with facial dysmorphism, including upslanting palpebral fissures, epicanthal folds, highly arched palate, microstomia, and retrognathia. This syndrome is transmitted as an X-linked trait.","definition_xrefs":["Orphanet:2528"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-microcornea syndrome, Seemanova type","secondary_identifiers":["SCTID:715464002","icd11.foundation:1197077842","GARD:3627","MEDGEN:419433","MESH:C537539","UMLS:C2931524"],"synonyms":[{"name":"Seemanova Lesny syndrome","type":"related"},{"name":"Seemanova-Lesny syndrome","type":"exact"},{"name":"X-linked microcephaly, microphthalmia, microcornea, congenital cataract, hypogenitalism, mental deficiency, growth retardation","type":"related"},{"name":"microcephaly microcornea syndrome Seemanova type","type":"related"}],"termid":"MONDO:0016760","xrefs":{"Monarch":{"xref_id":"0016760"}}}


id: MONDO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma involving the extremities. It usually presents as nodular masses in the dermis and subcutaneous tissues or in the tendons and fascia. It frequently recurs and metastasizes to other anatomic sites. The most common sites of metastasis are the lungs, lymph nodes, bones, and brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral epithelioid sarcoma","secondary_identifiers":["NCIT:C27473","MEDGEN:232131","DOID:6988","UMLS:C1333306"],"synonyms":[{"name":"conventional epithelioid sarcoma","type":"exact"},{"name":"distal-type epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0004060","xrefs":{"Monarch":{"xref_id":"0004060"}}}


id: GO:2001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycogen binding","synonyms":[{"name":"animal starch binding","type":"related"},{"name":"liver starch binding","type":"related"}],"termid":"GO:2001069"}


id: PBO:0004219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-medated transport (predicted)","termid":"PBO:0004219"}


id: FYPO:0006280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of crossover formation as part of mitotic recombination is increased in centromeric regions.","definition_xrefs":["PomBase:mah","PMID:28977643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased mitotic recombination with crossover formation at centromere","termid":"FYPO:0006280"}


id: MONDO:0020398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital mitral stenosis is a congenital heart malformation comprising a spectrum of morphologically heterogeneous developmental anomalies that result in functional and anatomic obstruction of inflow into the left ventricle. The structure of the mitral valve is affected at the level of the supravalvular ring, annulus, leaflets or subvalvar copmponents and include supra-valvular ring, leaflet fusion (intra-leaflet ring), mitral parachute deformity and papillary muscle abnormalities. It may be isolated or associated with other heart malformations. The clinical presentation depends on the degree of obstruction, the presence of regurgitation, the presence and severity of associated pulmonary hypertension, and the presence of associated heart malformations. It may present with symptoms and signs of low cardiac output and right ventricular failure such as pulmonary infections, failure to thrive, exertional dyspnea, cough, cyanosis and congestive heart failure.","definition_xrefs":["Orphanet:99057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve stenosis","termid":"MONDO:0005852"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"},{"relation_name":"is_a","term_name":"inherited mitral valve disease","termid":"MONDO:0042966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital mitral stenosis","secondary_identifiers":["GARD:1496","ICD10CM:Q23.2","MEDGEN:57857","NANDO:1200963","UMLS:C0158618","SCTID:82458004","HP:0011570","icd11.foundation:2102952411","ICD9:746.5"],"synonyms":[{"name":"congenital mitral stenosis","type":"exact"},{"name":"congenital mitral stenosis (disease)","type":"exact"},{"name":"congenital mitral valve stenosis","type":"exact"},{"name":"hereditary mitral valve stenosis","type":"exact"}],"termid":"MONDO:0020398","xrefs":{"Monarch":{"xref_id":"0020398"}}}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: _global:happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"during","termid":"_global:during"},{"relation_name":"is_a","term_name":"ends_during","termid":"_global:ends_during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"starts_during","termid":"_global:starts_during"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"happens_during","secondary_identifiers":["RO:0002092","GOREL:0000001"],"synonyms":[{"name":"during","type":"broad"},{"name":"occurs_during","type":"exact"}],"termid":"_global:happens_during"}


id: PBO:0028993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proline_import","termid":"PBO:0028993"}


id: PBO:0090299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mdm12","termid":"PBO:0090299"}


id: MONDO:0850126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal benign neoplasm that arises from the testis.","definition_xrefs":["DOID:0080371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sex cord-stromal benign neoplasm","termid":"MONDO:0850126","xrefs":{"Monarch":{"xref_id":"0850126"}}}


id: MONDO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myasthenia gravis (MG) is a rare, clinically heterogeneous, autoimmune disorder of the neuromuscular junction characterized by fatigable weakness of voluntary muscles.","definition_xrefs":["Orphanet:589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"myasthenia gravis","secondary_identifiers":["ICD10CM:G70.0","icd11.foundation:1270100227","ICD9:358.0","MedDRA:10028417","SCTID:91637004","UMLS:C0026896","NANDO:1200020","NCIT:C60989","NANDO:2200906","NANDO:2100252","DOID:437","EFO:0004991","MEDGEN:7764","ICD9:358.00","MESH:D009157","OMIM:254200","NORD:1478","GARD:7122"],"synonyms":[{"name":"MG","type":"related"},{"name":"acquired myasthenia","type":"exact"},{"name":"autoimmune myasthenia gravis","type":"exact"},{"name":"myasthenia gravis","type":"exact"}],"termid":"MONDO:0009688","xrefs":{"Monarch":{"xref_id":"0009688"}}}


id: MONDO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 6","secondary_identifiers":["MESH:C537689","OMIM:610688","DOID:0111001","GARD:15494","UMLS:C1853153","MEDGEN:342805"],"synonyms":[{"name":"JBTS6","type":"exact"},{"name":"Joubert syndrome 6","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM67","type":"exact"},{"name":"Joubert syndrome type 6","type":"exact"},{"name":"TMEM67 Joubert syndrome","type":"exact"}],"termid":"MONDO:0012539","xrefs":{"Monarch":{"xref_id":"0012539"}}}


id: PBO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor beta","termid":"PBO:0046671"}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: PBO:0064741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 77","termid":"PBO:0064741"}


id: PBO:0027497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_FR901464","termid":"PBO:0027497"}


id: GO:0097208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.","definition_xrefs":["Wikipedia:Lamellar_granule","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"alveolar lamellar body","termid":"GO:0097208"}


id: PBO:0044094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A2","termid":"PBO:0044094"}


id: PBO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase B","termid":"PBO:0051948"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: PR:P87053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof1 gene.","definition_xrefs":["UniProtKB:P87053","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.05c","synonyms":[{"name":"Spom972h-pof1","type":"exact"},{"name":"skp1-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87053"}


id: PBO:0084838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit","termid":"PBO:0084838"}


id: MONDO:0006919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition due to decreased dietary intake of potassium, as in starvation or failure to administer in intravenous solutions, or to gastrointestinal loss in diarrhea, chronic laxative abuse, vomiting, gastric suction, or bowel diversion. Severe potassium deficiency may produce muscular weakness and lead to paralysis and respiratory failure. Muscular malfunction may result in hypoventilation, paralytic ileus, hypotension, muscle twitches, tetany, and rhabomyolysis. Nephropathy from potassium deficit impairs the concentrating mechanism, producing polyuria and decreased maximal urinary concentrating ability with secondary polydipsia. (Merck Manual, 16th ed)","definition_xrefs":["MESH:D011191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium deficiency","secondary_identifiers":["MEDGEN:10874","UMLS:C0032827","EFO:1001120","MedDRA:10036445"],"termid":"MONDO:0006919","xrefs":{"Monarch":{"xref_id":"0006919"}}}


id: GO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans).","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glucagon secretion","termid":"GO:0070091"}


id: GO:1990437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition of a methyl group to the 2' oxygen atom of a nucleotide residue in an snRNA molecule.","definition_xrefs":["PMID:9844635","PMID:11842100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methylation","termid":"GO:0106349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA 2'-O-methylation","termid":"GO:1990437"}


id: PBO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 1","termid":"PBO:0046701"}


id: PBO:0041812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactivator associated arginine methyltransferase 1","termid":"PBO:0041812"}


id: PBO:0082427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bisphosphate-3'-nucleotidase; involved in salt tolerance and methionine biogenesis; dephosphorylates 3'-phosphoadenosine-5'-phosphate and 3'-phosphoadenosine-5'-phosphosulfate, intermediates of the sulfate assimilation pathway; human homolog BPNT1 complements yeast null mutant","termid":"PBO:0082427"}


id: PBO:0050536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepsin","termid":"PBO:0050536"}


id: GO:0060827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of Wnt signaling through beta-catenin that results in the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060827)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060827"}


id: MONDO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tularemia (obsolete MONDO:0002213)","termid":"MONDO:0002213","xrefs":{"Monarch":{"xref_id":"0002213"}}}


id: MOD:00442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N'-dimethylated L-arginine with secondary loss of an N,N'-carbodiimide molecular fragment.","definition_xrefs":["PubMed:15835918","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N'-dimethylated L-arginine with secondary neutral loss of N,N'-carbodiimide","synonyms":[{"name":"dCDI-NNMe2+Arg","type":"exact"}],"termid":"MOD:00442"}


id: GO:0052641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoic acid + UDP-glucose = benzoic acid glucose ester + UDP.","definition_xrefs":["MetaCyc:RXN-11660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoic acid glucosyltransferase activity","synonyms":[{"name":"UDP:glucose:BA glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoate glucosyltransferase activity","type":"exact"},{"name":"UDP:glucose:benzoic acid glucosyltransferase activity","type":"exact"},{"name":"benzoate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052641"}


id: MONDO:0016735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I, indolent and relatively circumscribed brain tumor. Morphologically it is characterized by the presence of astrocytes that line vascular and hyalinized pseudopapillae. In between the pseudopapillae aggregates of neurocytes, large neurons, and ganglioid cells are present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary glioneuronal tumor","secondary_identifiers":["MEDGEN:457400","NCIT:C92554","ICDO:9509/1","Orphanet:251962","ONCOTREE:PGNT","GARD:20730","DOID:0081283","UMLS:C2985174"],"synonyms":[{"name":"PGNT","type":"exact"},{"name":"papillary glioneuronal tumor (WHO grade I)","type":"exact"},{"name":"papillary glioneuronal tumour (WHO grade I)","type":"exact"},{"name":"pseudopapillary ganglioglioneurocytoma","type":"exact"},{"name":"pseudopapillary neurocytoma with glial differentiation","type":"exact"}],"termid":"MONDO:0016735","xrefs":{"Monarch":{"xref_id":"0016735"}}}


id: PBO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036031"}


id: MONDO:0859301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with craniofacial dysmorphism and skeletal defects","secondary_identifiers":["OMIM:620083","MEDGEN:1824008","UMLS:C5774235","Orphanet:662207"],"termid":"MONDO:0859301","xrefs":{"Monarch":{"xref_id":"0859301"}}}


id: PBO:0038515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 1","termid":"PBO:0038515"}


id: GO:0048071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in one sex that is not observed in the other sex.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex-specific pigmentation","termid":"GO:0048071"}


id: PBO:0054440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1837","termid":"PBO:0054440"}


id: GO:1900289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"negatively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"down regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"down-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"downregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"inhibition of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900289"}


id: PBO:0086151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to nuclear pore complex via Mlp1p and Mlp2p; found with the subset of nuclear pores farthest from the nucleolus; may interact with ribosomes","termid":"PBO:0086151"}


id: GO:1901919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exoribonuclease activity","synonyms":[{"name":"activation of exoribonuclease activity","type":"narrow"},{"name":"up regulation of exoribonuclease activity","type":"exact"},{"name":"up-regulation of exoribonuclease activity","type":"exact"},{"name":"upregulation of exoribonuclease activity","type":"exact"}],"termid":"GO:1901919"}


id: MONDO:0044937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm that arises from the rectum and invades through the muscularis mucosa into the submucosa. The vast majority are adenocarcinomas.","definition_xrefs":["NCIT:C9382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"},{"relation_name":"is_a","term_name":"epithelial neoplasm of rectum","termid":"MONDO:0024476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectal carcinoma","secondary_identifiers":["MEDGEN:40100","UMLS:C0007113"],"synonyms":[{"name":"cancer of rectum","type":"broad"},{"name":"cancer of the rectum","type":"broad"},{"name":"carcinoma of rectum","type":"exact"},{"name":"carcinoma of the rectum","type":"exact"},{"name":"rectal cancer","type":"broad"},{"name":"rectal carcinoma","type":"exact"},{"name":"rectum carcinoma","type":"exact"}],"termid":"MONDO:0044937","xrefs":{"Monarch":{"xref_id":"0044937"}}}


id: FYPO:0002605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during G2 phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic G2 phase","termid":"FYPO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0002605"}


id: GO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The RNA metabolic process that joins two exons, each of which has free ends that were generated by endonucleolytic cleavages, by a ligation reaction.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"part_of","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA exon ligation","termid":"GO:0000378"}


id: MOD:01110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-cysteine residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00905","MOD:01155"],"is_obsolete":false,"name":"isoprenylated cysteine","synonyms":[{"name":"IpCys","type":"exact"}],"termid":"MOD:01110"}


id: PBO:0079413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 7","termid":"PBO:0079413"}


id: PBO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Mus7/Mms22","termid":"PBO:0001536"}


id: SO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of polynucleotide sequence produced by digestion with a restriction endonuclease.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Restriction_fragment"],"synonyms":[{"name":"restriction fragment","type":"exact"}],"termid":"SO:0000412"}


id: MONDO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone neoplasm characterized by development of two or more cartilage capped bony outgrowths (osteochondromas) of the long bones.","definition_xrefs":["Orphanet:321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"exostosis","termid":"MONDO:0002181"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary multiple osteochondromas","secondary_identifiers":["GARD:7035","DOID:206","NCIT:C5183","SCTID:716742001","NORD:1233","icd11.foundation:1578364807","NANDO:2201014","SCTID:254044004","OMIMPS:133700","UMLS:C0015306","MEDGEN:4612","MESH:D005097","NANDO:2200049","NANDO:2201015"],"synonyms":[{"name":"Bessel-Hagen disease","type":"exact"},{"name":"EXT","type":"related"},{"name":"HMO","type":"related"},{"name":"exostoses, multiple","type":"exact"},{"name":"hereditary multiple exostoses","type":"related"},{"name":"hereditary multiple exostoses 1","type":"narrow"},{"name":"hereditary multiple exostoses 2","type":"narrow"},{"name":"hereditary multiple exostoses 3","type":"narrow"},{"name":"hereditary multiple exostosis","type":"related"},{"name":"multiple cartilaginous exostoses","type":"exact"},{"name":"multiple congenital exostosis","type":"exact"},{"name":"multiple exostoses","type":"related"},{"name":"multiple exostosis syndromes","type":"exact"},{"name":"multiple ostechondromas","type":"exact"},{"name":"osteochondromatosis syndrome","type":"exact"},{"name":"osteochondromatosis syndrome (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0005508","xrefs":{"Monarch":{"xref_id":"0005508"}}}


id: GO:0046048
data:
  {"annotated_genes":["SJAG_00779","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP, uridine (5'-)diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP metabolism","type":"exact"}],"termid":"GO:0046048","terms_by_termid":{"GO:0006225":null,"GO:0006256":null}}


id: PBO:0110356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 pseudogene 3","termid":"PBO:0110356"}


id: PBO:0034599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0034599"}


id: MONDO:0010719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation sensitivity of natural killer activity","secondary_identifiers":["MESH:C564066","UMLS:C1839408","MEDGEN:333311","OMIM:312210"],"synonyms":[{"name":"X-Ray Nk sensitivity","type":"related"},{"name":"radiation sensitivity of natural killer activity","type":"exact"}],"termid":"MONDO:0010719","xrefs":{"Monarch":{"xref_id":"0010719"}}}


id: MONDO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mixed germ cell cancer (obsolete MONDO:0002600)","termid":"MONDO:0002600","xrefs":{"Monarch":{"xref_id":"0002600"}}}


id: PR:Q9UTR7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp3 gene.","definition_xrefs":["UniProtKB:Q9UTR7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.04c","synonyms":[{"name":"Spom972h-mcp3","type":"exact"},{"name":"meiotically up-regulated gene 7 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTR7"}


id: PBO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISM1 antisense RNA 1","termid":"PBO:0051874"}


id: GO:0019487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylene, a colorless, volatile, explosive gas, that occur in the absence of oxygen.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylene metabolic process","termid":"GO:0018864"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkyne catabolic process","termid":"GO:0043454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic acetylene catabolic process","secondary_identifiers":["MetaCyc:P161-PWY"],"synonyms":[{"name":"anaerobic acetylene breakdown","type":"exact"},{"name":"anaerobic acetylene catabolism","type":"exact"},{"name":"anaerobic acetylene degradation","type":"exact"},{"name":"anaerobic ethyne catabolic process","type":"exact"},{"name":"anaerobic ethyne catabolism","type":"exact"}],"termid":"GO:0019487"}


id: PBO:0117262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein chaperone/ protein-disulfide reductase, Dmo2","termid":"PBO:0117262"}


id: MONDO:0024639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated neuroendocrine tumor that arises from the stomach. It produces serotonin and it may occasionally be found in association with a carcinoid syndrome.","definition_xrefs":["NCIT:C27443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","secondary_identifiers":["MEDGEN:475770","UMLS:C3274137"],"synonyms":[{"name":"gastric EC cell serotonin-producing NET","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumor","type":"exact"},{"name":"gastric EC-cell serotonin-producing neuroendocrine tumour","type":"exact"},{"name":"gastric enterochromaffin cell serotonin-producing neuroendocrine tumor","type":"exact"}],"termid":"MONDO:0024639","xrefs":{"Monarch":{"xref_id":"0024639"}}}


id: FYPO:0005089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which RNA polymerase II carboxy-terminal domain kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0006551","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abolished RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"RNA polymerase II carboxy-terminal domain kinase activity abolished","type":"exact"}],"termid":"FYPO:0005089"}


id: MONDO:0013949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX13 defect","termid":"MONDO:0100267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0006025","MONDO:0005559","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 11A (Zellweger)","secondary_identifiers":["OMIM:614883","DOID:0080485","GARD:15874","MEDGEN:766914","UMLS:C3554000"],"synonyms":[{"name":"PBD11A","type":"related"},{"name":"peroxisome biogenesis disorder 11A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 13","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group H","type":"related"}],"termid":"MONDO:0013949","xrefs":{"Monarch":{"xref_id":"0013949"}}}


id: MONDO:0700175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cat disease","termid":"MONDO:0024912"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline neoplasm","termid":"MONDO:0700175","xrefs":{"Monarch":{"xref_id":"0700175"}}}


id: PBO:0061033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein like","termid":"PBO:0061033"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118786],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: PBO:0056331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 12","termid":"PBO:0056331"}


id: GO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","termid":"GO:0075260"}


id: PBO:0082523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-cycle checkpoint S/T protein kinase; required for transient G2/M arrest after DNA damage, damage-induced transcription, and nuclear-to-cytoplasmic redistribution of Rnr2p-Rnr4p after genotoxic stress and iron deprivation; phosphorylates repair protein Rad55p, transcriptional repressor Sml1p, superoxide dismutase, and ribonucleotide reductase inhibitors Crt1p and Dif1p; functions in the Mec1p pathway to regulate dNTP pools and telomere length; postreplicative repair role","termid":"PBO:0082523"}


id: PBO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 9","termid":"PBO:0043620"}


id: GO:0098975
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma.","definition_xrefs":["Wikipedia:Neuromuscular_junction&oldid=723623502","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse","termid":"GO:0098794"},{"relation_name":"part_of","term_name":"neuromuscular junction","termid":"GO:0031594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse of neuromuscular junction","termid":"GO:0098975"}


id: PBO:0059397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS30 divergent transcript","termid":"PBO:0059397"}


id: GO:0035486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a C/C mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cytosine/cytosine mispair binding","synonyms":[{"name":"C/C mispair binding","type":"exact"}],"termid":"GO:0035486"}


id: PBO:0076234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 2","termid":"PBO:0076234"}


id: PBO:0050070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HM13 antisense RNA 1","termid":"PBO:0050070"}


id: PBO:0076096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 2","termid":"PBO:0076096"}


id: FYPO:0005263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular arginine level","synonyms":[{"name":"increased arginine accumulation","type":"related"},{"name":"increased cellular L-arginine level","type":"exact"},{"name":"increased cellular arginine level during mitotic cell cycle","type":"related"},{"name":"increased cellular arginine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005263"}


id: PBO:0120049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp24","termid":"PBO:0120049"}


id: FYPO:0004046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004046"}


id: MONDO:0011823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental malformations-deafness-dystonia syndrome is characterized by the association of midline malformations, sensory hearing loss, and a delayed-onset generalized dystonia syndrome.","definition_xrefs":["Orphanet:79107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0003441"],"is_obsolete":false,"name":"developmental malformations-deafness-dystonia syndrome","secondary_identifiers":["GARD:9818","OMIM:607371","UMLS:C5848323","MEDGEN:1848671","MESH:C537704"],"synonyms":[{"name":"DJO","type":"related"},{"name":"dystonia, juvenile-onset","type":"related"},{"name":"juvenile-onset dystonia","type":"related"}],"termid":"MONDO:0011823","xrefs":{"Monarch":{"xref_id":"0011823"}}}


id: MONDO:0000243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte infection of the hair that infects the hair surface.","definition_xrefs":["Wikipedia:Exothrix"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectothrix infectious disease","secondary_identifiers":["DOID:0050097"],"termid":"MONDO:0000243","xrefs":{"Monarch":{"xref_id":"0000243"}}}


id: PBO:0085031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase regulatory subunit of the 26S proteasome; similar to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085031"}


id: PBO:0063969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 3","termid":"PBO:0063969"}


id: PBO:0024832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYosin II of Pombe","termid":"PBO:0024832"}


id: PBO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit a (predicted)","termid":"PBO:0002088"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: PBO:0027526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027526"}


id: GO:0006719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone catabolic process","synonyms":[{"name":"juvenile hormone breakdown","type":"exact"},{"name":"juvenile hormone catabolism","type":"exact"},{"name":"juvenile hormone degradation","type":"exact"}],"termid":"GO:0006719"}


id: PBO:0034190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-provides_nutrients_for","termid":"PBO:0034190"}


id: PBO:0087151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA duplex-sensing translocase; ATP-dependent 3'-5' RNA helicase of the DExD/H family; involved in nuclear RNA processing and degradation as a component of TRAMP complex and in TRAMP-independent processes; TRAMP unwinds RNA duplexes, with Mtr4p unwinding activity stimulated by Pap2p/Air2p but not dependent on ongoing polyadenylation; contains an arch domain, with two coiled-coil arms/stalks and a globular fist/KOW domain, which has RNA binding activity and is required for 5.8S rRNA processing","termid":"PBO:0087151"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: SO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methylpseudouridine","secondary_identifiers":["RNAMOD:094"],"synonyms":[{"name":"3-methylpseudouridine","type":"exact"},{"name":"m3Y","type":"exact"},{"name":"three methylpseudouridine","type":"exact"}],"termid":"SO:0001377"}


id: PBO:0050463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOP homeobox","termid":"PBO:0050463"}


id: MONDO:0009132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia-like disorder","secondary_identifiers":["MEDGEN:347385","UMLS:C1857153","MESH:C535728","OMIM:224000"],"synonyms":[{"name":"dysautonomia like disorder","type":"related"},{"name":"dysautonomia-like disorder","type":"exact"}],"termid":"MONDO:0009132","xrefs":{"Monarch":{"xref_id":"0009132"}}}


id: MONDO:0033196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in (obsolete MONDO:0033196)","secondary_identifiers":["OMIMPS:227220"],"termid":"MONDO:0033196","xrefs":{"Monarch":{"xref_id":"0033196"}}}


id: PBO:0110562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane myo-inositol transmembrane transporter","termid":"PBO:0110562"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: GO:0150035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by BDNF, modulating synaptic transmission.","definition_xrefs":["GOC:bc","PMID:19448629","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0150035"}


id: PBO:0041768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 8","termid":"PBO:0041768"}


id: PBO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nucleotide exchange factor synembryn family","termid":"PBO:0012285"}


id: MONDO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp calcification","secondary_identifiers":["MEDGEN:41471","UMLS:C0011401","MESH:D003784","SCTID:57602001","ICD10CM:K04.2","DOID:5608","icd11.foundation:1672640309"],"synonyms":[{"name":"pulp calcification","type":"exact"},{"name":"pulp calcifications","type":"exact"},{"name":"pulpal calcifications","type":"exact"}],"termid":"MONDO:0003542","xrefs":{"Monarch":{"xref_id":"0003542"}}}


id: PBO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with","termid":"PBO:0034358"}


id: PBO:0073947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC20A1 divergent transcript","termid":"PBO:0073947"}


id: MONDO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. There are four complementation classes of cobalamin defects (cblC, cblD, cblF and cblJ) that are responsible for methylmalonic acidemia - homocystinuria (methylmalonic acidemia - homocystinuria cblC, cblD cblF and cblJ).","definition_xrefs":["Orphanet:26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"homocystinuria","termid":"MONDO:0004737"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria","secondary_identifiers":["GARD:3579","UMLS:C5848324","MEDGEN:1864102","OMIMPS:277400","MESH:C537359"],"synonyms":[{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis","type":"exact"},{"name":"methylmalonic acidemia and homocystinemia","type":"related"},{"name":"methylmalonic aciduria with homocystinuria","type":"exact"}],"termid":"MONDO:0016826","xrefs":{"Monarch":{"xref_id":"0016826"}}}


id: PBO:0074014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 5","termid":"PBO:0074014"}


id: GO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = D-galactosyl-N-acetyl-D-glucosaminyl-(1,3)-D-galactosyl-(1,4)-D-glucosylceramide + UDP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity (obsolete GO:0047275)","termid":"GO:0047275"}


id: FYPO:0003293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal UDP-galactose transmembrane transport","termid":"FYPO:0003292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased UDP-galactose transmembrane transport","synonyms":[{"name":"increased UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"increased UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003293"}


id: PBO:0065369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing 4","termid":"PBO:0065369"}


id: PBO:0067439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 560, pseudogene","termid":"PBO:0067439"}


id: PBO:0074371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMCR8-C9orf72 complex subunit","termid":"PBO:0074371"}


id: MONDO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 1","secondary_identifiers":["MEDGEN:1709039","GARD:18736","UMLS:C5394675","Orphanet:1692"],"synonyms":[{"name":"Mosaic trisomy chromosome 1","type":"exact"},{"name":"Mosaic trisomy type 1","type":"exact"},{"name":"trisomy 1 mosaicism","type":"exact"}],"termid":"MONDO:0015706","xrefs":{"Monarch":{"xref_id":"0015706"}}}


id: PBO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family 1","termid":"PBO:0003014"}


id: GO:0098808
data:
  {"annotated_genes":["SJAG_05010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91033],"is_not":false,"summary":null,"term":"GO:0098808"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an mRNA molecule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"},{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"mRNA cap binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098808","terms_by_termid":{"GO:0098808":null}}


id: PBO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda receptor 1","termid":"PBO:0050964"}


id: PBO:0069599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 876, pseudogene","termid":"PBO:0069599"}


id: PBO:0027066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_metabolic_process","termid":"PBO:0027066"}


id: GO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic spindle assembly checkpoint signaling","synonyms":[{"name":"meiotic spindle assembly checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072464"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: GO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability involved in acute inflammatory response","synonyms":[{"name":"regulation of vascular permeability during acute inflammatory response","type":"related"}],"termid":"GO:0002528"}


id: PBO:0058333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4707","termid":"PBO:0058333"}


id: PBO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 1","termid":"PBO:0061927"}


id: MOD:01247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00813 after formula correction. Remap to MOD:00813.","definition_xrefs":["PubMed:15189151","PubMed:11857757","PubMed:11344537","Unimod:295#T"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01247 fucosylated -site T (obsolete MOD:01247)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01247"}


id: PBO:0028925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription","termid":"PBO:0028925"}


id: GO:0036002
data:
  {"annotated_genes":["SJAG_01200","SJAG_02622","SJAG_03383","SJAG_03995","SJAG_00225","SJAG_04497","SJAG_04117","SJAG_03983","SJAG_00249","SJAG_04898","SJAG_03448","SJAG_00058"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79264,79702,88546],"is_not":false,"summary":null,"term":"GO:0036002"},{"annotations":[73964,57740,78403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030628"},{"annotations":[81185,112870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030627"},{"annotations":[66575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045131"},{"annotations":[117745,77814,100429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097157"}]},"cv_name":"molecular_function","definition":"Binding to a pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.","definition_xrefs":["SO:0000120","GOC:kmv","GOC:bf","PMID:21901112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_01200":null,"SJAG_02622":null,"SJAG_03383":null,"SJAG_03448":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"pre-mRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein-coding primary transcript binding","type":"related"}],"termid":"GO:0036002","terms_by_termid":{"GO:0030627":null,"GO:0030628":null,"GO:0036002":null,"GO:0045131":null,"GO:0097157":null}}


id: PBO:0052771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 63","termid":"PBO:0052771"}


id: GO:0140003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 36.","definition_xrefs":["PMID:16364921","PMID:15489290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0140566","GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone H3K36me3 reader activity","synonyms":[{"name":"H3-K36me3 modified histone binding","type":"narrow"},{"name":"H3K36me3 modified histone binding","type":"narrow"}],"termid":"GO:0140003"}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: PBO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit (predicted)","termid":"PBO:0001522"}


id: PBO:0078803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 20-1","termid":"PBO:0078803"}


id: GO:0009945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of an axis that initiates at a point and radiates outward from the point.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial axis specification","termid":"GO:0009945"}


id: PBO:0083139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data","termid":"PBO:0083139"}


id: PBO:0048000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 3","termid":"PBO:0048000"}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: RO:HOM0000075
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves orthologous pairs of transcription factors and downstream regulated genes in different organisms.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_regulogy_relationship_with","synonyms":[{"name":"regulogous to","type":"exact"}],"termid":"RO:HOM0000075"}


id: PBO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc4","termid":"PBO:0003863"}


id: PBO:0081455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 322","termid":"PBO:0081455"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: PBO:0083164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified ORF RPL36B/YPL249C-A; identified by fungal homology and RT-PCR","termid":"PBO:0083164"}


id: PBO:0055590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3026","termid":"PBO:0055590"}


id: PBO:0041631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 1","termid":"PBO:0041631"}


id: PBO:0043624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol-O-methyltransferase domain containing 1","termid":"PBO:0043624"}


id: PBO:0085575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085575"}


id: PBO:0088275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein, anillin Mid2","termid":"PBO:0088275"}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_05209","SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93912,97440,98988],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:20043909","GOC:ab","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: PBO:0030783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_chemical_stimulus","termid":"PBO:0030783"}


id: GO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in the anterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"afferent axon development in lateral line nerve","termid":"GO:0048893"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in anterior lateral line nerve","termid":"GO:0048910"}


id: PBO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1","termid":"PBO:0061751"}


id: PBO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family (predicted)","termid":"PBO:0002429"}


id: SO:1001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory region, the stem-loop secondary structural element is downstream of the redefined region.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_stem_loop_structure","synonyms":[{"name":"three prime stem loop structure","type":"exact"}],"termid":"SO:1001279"}


id: GO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-tryptophan to form tryptophan-6,7-dione, otherwise known as tryptophyl quinone, which is further modified by cross-linking to either tryptophan or cysteine.","definition_xrefs":["RESID:AA0148","PMID:2028257"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan oxidation to tryptophyl quinone (obsolete GO:0019926)","termid":"GO:0019926"}


id: PBO:0029717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_replication","termid":"PBO:0029717"}


id: MONDO:0020193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020193)","secondary_identifiers":["Orphanet:98603"],"synonyms":[{"name":"disease of lacrimal gland","type":"broad"},{"name":"disorder of lacrimal gland","type":"broad"},{"name":"lacrimal gland disease","type":"broad"}],"termid":"MONDO:0020193","xrefs":{"Monarch":{"xref_id":"0020193"}}}


id: MONDO:0014252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypobetalipoproteinemia in which the cause of the disease is a mutation in the APOB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypobetalipoproteinemia","termid":"MONDO:0017774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"familial hypobetalipoproteinemia 1","secondary_identifiers":["SCTID:60193003","MEDGEN:1639219","OMIM:615558","MESH:C566267","UMLS:C4551990","DOID:0111062","GARD:2876","NANDO:1201037"],"synonyms":[{"name":"APOB hypobetalipoproteinemia","type":"exact"},{"name":"FHBL","type":"related"},{"name":"FHBL1","type":"exact"},{"name":"acanthocytosis with hypobetalipoproteinemia","type":"related"},{"name":"familial hypobetalipoproteinemia 1","type":"exact"},{"name":"familial hypobetalipoproteinemia type 1","type":"exact"},{"name":"hypobetalipoproteinemia","type":"broad"},{"name":"hypobetalipoproteinemia caused by mutation in APOB","type":"exact"},{"name":"hypobetalipoproteinemia, Normotriglyceridemic","type":"related"},{"name":"hypobetalipoproteinemia, familial","type":"related"},{"name":"hypobetalipoproteinemia, familial, 1","type":"related"},{"name":"hypobetalipoproteinemia, familial, type 1","type":"exact"}],"termid":"MONDO:0014252","xrefs":{"Monarch":{"xref_id":"0014252"}}}


id: PBO:0066806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 105","termid":"PBO:0066806"}


id: PBO:0054371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1765","termid":"PBO:0054371"}


id: PBO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 24","termid":"PBO:0080038"}


id: PBO:0048898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 22","termid":"PBO:0048898"}


id: PBO:0088233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog1","termid":"PBO:0088233"}


id: PBO:0088034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; ER membrane protein that recruits and integrates the ubiquitin-conjugating enzyme Ubc7p into ER membrane-bound ubiquitin ligase complexes that function in the ER-associated degradation (ERAD) pathway for misfolded proteins; contains a CUE domain that binds ubiquitin to facilitate intramolecular monoubiquitination and to promote diubiquitin elongation, facilitating polyubiquitin chain formation","termid":"PBO:0088034"}


id: MONDO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete channelopathy with epilepsy (obsolete MONDO:0015922)","secondary_identifiers":["Orphanet:182083"],"termid":"MONDO:0015922","xrefs":{"Monarch":{"xref_id":"0015922"}}}


id: FYPO:0004860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased beta-glucan level","termid":"FYPO:0001194"},{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased cell wall beta-glucan level","synonyms":[{"name":"increased cell wall beta-D-glucan level","type":"exact"},{"name":"increased cell wall beta-glucan accumulation","type":"related"},{"name":"increased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004860"}


id: PBO:0038607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACBD3 antisense RNA 1","termid":"PBO:0038607"}


id: GO:0007347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"modulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"preblastoderm mitotic cell cycle modulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulation","type":"exact"},{"name":"preblastoderm mitotic cell cycle regulator","type":"related"},{"name":"regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0007347"}


id: PR:O74953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uri1 gene.","definition_xrefs":["UniProtKB:O74953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.07c","synonyms":[{"name":"Spom972h-uri1","type":"exact"}],"termid":"PR:O74953"}


id: GO:0170055
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a lipid from one side of a membrane to the other.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"},{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lipid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170055","terms_by_termid":{"GO:0170045":null}}


id: PBO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 7","termid":"PBO:0046565"}


id: PBO:0061572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 4","termid":"PBO:0061572"}


id: PBO:0056118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 4","termid":"PBO:0056118"}


id: GO:0021549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:jid","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum development","termid":"GO:0021549"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PomBase:mlr","PMID:19879140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: PBO:0046000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX antisense RNA 1","termid":"PBO:0046000"}


id: PBO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase chaperone Atp12 (predicted)","termid":"PBO:0001004"}


id: MONDO:0008331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Apparent optic disk swelling in the absence of increased intracranial pressure.","gene_count":0,"genotype_count":0,"name":"obsolete pseudopapilledema (obsolete MONDO:0008331)","secondary_identifiers":["ICD9:377.24","MESH:C562401","DOID:1392","OMIM:177800","Orphanet:519339","SCTID:57138009"],"synonyms":[{"name":"crowded optic disk","type":"related"},{"name":"obsolete pseudopapilledema (disease)","type":"exact"},{"name":"pseudopapilledema","type":"exact"}],"termid":"MONDO:0008331","xrefs":{"Monarch":{"xref_id":"0008331"}}}


id: GO:0031029
data:
  {"annotated_genes":["SJAG_00526","SJAG_03508","SJAG_00883","SJAG_00078","SJAG_06270","SJAG_00082","SJAG_03631","SJAG_01386","SJAG_04455","SJAG_00229","SJAG_01790","SJAG_03936","SJAG_02169","SJAG_01464","SJAG_04776","SJAG_02514","SJAG_04943","SJAG_03681","SJAG_03353","SJAG_00600","SJAG_03048","SJAG_01805","SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89427,104038,112957],"is_not":false,"summary":null,"term":"GO:0031029"},{"annotations":[90192,107095,74667,95132,91209,100795,106785,92403,92318,115505,109741,99101,104587,106652,92932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[101913,93285,86980,110100,89466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of septation initiation network","type":"exact"},{"name":"regulation of septation initiation signaling cascade","type":"related"},{"name":"regulation of septation initiation signalling","type":"exact"}],"termid":"GO:0031029","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: PBO:0073744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3","termid":"PBO:0073744"}


id: MONDO:0019955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"6cm and approximately 1/3 have metastasized at the time of diagnosis. It often co-occurs with Zollinger-Ellison syndrome or multiple endocrine neoplasia type 1 (MEN 1).","definition_xrefs":["Orphanet:97261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"GRFoma","secondary_identifiers":["GARD:19356","MEDGEN:577391","icd11.foundation:1245945716","UMLS:C0346406"],"synonyms":[{"name":"GRF tumor","type":"exact"},{"name":"GRF tumour","type":"exact"},{"name":"Growth hormone releasing factor tumor","type":"exact"},{"name":"Growth hormone releasing factor tumour","type":"exact"}],"termid":"MONDO:0019955","xrefs":{"Monarch":{"xref_id":"0019955"}}}


id: GO:0160240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that promotes premature RNA polymerase II transcription termination of transcripts that are unfavorably configured for transcriptional elongation by releasing RNA polymerase II from bound DNA or promoting RNA polymerase II degradation.","definition_xrefs":["PMID:34762484","PMID:33385327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase II transcription initiation surveillance","termid":"GO:0160240"}


id: MONDO:0017193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symptomatic form of Coffin-Lowry syndrome in female carriers","secondary_identifiers":["Orphanet:276630","MEDGEN:1814465","GARD:21057","UMLS:C5680787"],"termid":"MONDO:0017193","xrefs":{"Monarch":{"xref_id":"0017193"}}}


id: PBO:0041870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 2","termid":"PBO:0041870"}


id: GO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of an endothelial cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"endothelial cell-matrix adhesion","termid":"GO:0090673"}


id: PBO:0050625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSDL2 antisense RNA 1","termid":"PBO:0050625"}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["SCTID:85777005","UMLS:C0010930","DOID:9938","MEDGEN:3686","icd11.foundation:1034960983","MESH:D003607","ICD9:375.30","NCIT:C34521"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["UMLS:C0752332","MEDGEN:156265","MESH:D020945"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: GO:0090150
data:
  {"annotated_genes":["SJAG_02361","SJAG_02355","SJAG_02320","SJAG_01435","SJAG_02354","SJAG_00916","SJAG_00330","SJAG_00959","SJAG_01641","SJAG_01516","SJAG_03781","SJAG_02330","SJAG_03440","SJAG_01809","SJAG_01951","SJAG_02797","SJAG_01299","SJAG_05414","SJAG_01759","SJAG_03930","SJAG_03838","SJAG_03396","SJAG_02914","SJAG_04763","SJAG_03502","SJAG_00404","SJAG_00144","SJAG_03633","SJAG_03756","SJAG_03865","SJAG_01240","SJAG_04609","SJAG_03515","SJAG_02034","SJAG_04129","SJAG_01640","SJAG_01120","SJAG_03315","SJAG_01349","SJAG_02456","SJAG_00569","SJAG_02588","SJAG_05302","SJAG_04451","SJAG_02282","SJAG_00064","SJAG_04684","SJAG_02208","SJAG_02065","SJAG_01780","SJAG_01112","SJAG_01367","SJAG_01558","SJAG_01733","SJAG_00277","SJAG_00360","SJAG_03411","SJAG_03970","SJAG_01949","SJAG_01282","SJAG_04203","SJAG_01127","SJAG_04208","SJAG_03684","SJAG_00895","SJAG_01917","SJAG_00603","SJAG_04996","SJAG_01940","SJAG_04294","SJAG_00175","SJAG_02524","SJAG_01405","SJAG_01840","SJAG_04565","SJAG_01114","SJAG_03955","SJAG_01782","SJAG_01496","SJAG_02398","SJAG_03915","SJAG_00379","SJAG_03029","SJAG_03416","SJAG_02437","SJAG_05300","SJAG_00687","SJAG_00858","SJAG_01223","SJAG_01999","SJAG_01178","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97418,106855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[61905,112376,100651,112593,118515,94388,90764,67787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[95211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[76451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"},{"annotations":[105967,106595,112595,109152,94644,79367,108363,71942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[87539],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[95229,109198,81292,108909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[107872,74925,82032,96838,97555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[89892,110974,94923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[97867,109975,104327,113432,107961,113990,100714,97556,98099,104018,111839,69304,91145,94324,103040,108910,107873,105719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[107145,112786,115869,88112,75741,107121,79557,102452,58405,75195,77477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[76242,58530,80068,80326,80387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[78377,71702,98088,109972,111374,109619,59047,97737,107122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[74696,76800,95394,60679,72807,76635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[90470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[67580,93757,74729,109199,70548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[114731,91107,113968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[102111,107874,74977,75386,97557,77325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[114695,76830,74569,113726,87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The 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id: MONDO:0018928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare liver disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare hepatic disease (obsolete MONDO:0018928)","secondary_identifiers":["Orphanet:57146"],"synonyms":[{"name":"rare liver disease","type":"exact"}],"termid":"MONDO:0018928","xrefs":{"Monarch":{"xref_id":"0018928"}}}


id: MONDO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A labyrinthitis which is a bacterial infectious disease of the inner ear, often causing deafness and loss of vestibular function. This is caused when bacteria spread to the inner ear during the course of severe acute otitis media, purulent meningitis, or an enlarging cholesteatoma.","definition_xrefs":["DOID:13534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purulent labyrinthitis","secondary_identifiers":["icd11.foundation:479586656","SCTID:24817009","UMLS:C0155506","ICD9:386.33","MEDGEN:509995"],"synonyms":[{"name":"acute suppurative labyrinthitis","type":"related"},{"name":"bacterial labyrinthitis","type":"exact"},{"name":"suppurative labyrinthitis","type":"exact"}],"termid":"MONDO:0001739","xrefs":{"Monarch":{"xref_id":"0001739"}}}


id: GO:0031598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The regulatory subcomplex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle","termid":"GO:0005838"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome complex","termid":"GO:0031595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}


id: PBO:0066124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF3 divergent transcript","termid":"PBO:0066124"}


id: PBO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3","termid":"PBO:0045169"}


id: PBO:0091244
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.1x10^4 min-1 M-1","termid":"PBO:0091244"}


id: GO:0004148
data:
  {"annotated_genes":["SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73510],"is_not":false,"summary":null,"term":"GO:0004148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + NAD+ = N(6)-[(R)-lipoyl]-L-lysyl-[protein] + NADH + H+.","definition_xrefs":["RHEA:15045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase (NADH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.8.1.4","Reactome:R-HSA-9861616","Reactome:R-HSA-9907572","Reactome:R-HSA-1222412","Reactome:R-HSA-9858589","Reactome:R-HSA-9859172","Reactome:R-HSA-5694018","MetaCyc:1.8.1.4-RXN","Reactome:R-HSA-9853499"],"synonyms":[{"name":"E3 component of alpha-ketoacid dehydrogenase complexes activity","type":"related"},{"name":"L-protein activity","type":"related"},{"name":"LDP-Glc activity","type":"narrow"},{"name":"LDP-Val activity","type":"narrow"},{"name":"dehydrolipoate dehydrogenase activity","type":"related"},{"name":"diaphorase activity","type":"related"},{"name":"dihydrolipoamide dehydrogenase activity","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoamide:NAD+ oxidoreductase","type":"related"},{"name":"dihydrolipoic dehydrogenase activity","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydrothioctic dehydrogenase activity","type":"related"},{"name":"glycine-cleavage system L-protein activity","type":"related"},{"name":"lipoamide dehydrogenase (NADH) activity","type":"related"},{"name":"lipoamide oxidoreductase (NADH) activity","type":"related"},{"name":"lipoamide reductase (NADH) activity","type":"related"},{"name":"lipoamide reductase activity","type":"related"},{"name":"lipoate dehydrogenase activity","type":"related"},{"name":"lipoic acid dehydrogenase activity","type":"related"},{"name":"lipoyl dehydrogenase activity","type":"related"},{"name":"protein-6-N-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"},{"name":"protein-N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase","type":"related"}],"termid":"GO:0004148","terms_by_termid":{"GO:0004148":null}}


id: GO:1900312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltohexaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"regulates","term_name":"maltohexaose transport","termid":"GO:2001103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of maltohexaose transport","termid":"GO:1900312"}


id: GO:0042076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of peptidyl-amino acids through a phosphoester bond forming, for example, GlcNAc-alpha-1-P-Ser residues.","definition_xrefs":["PMID:7499424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein phosphate-linked glycosylation","synonyms":[{"name":"phosphoglycosylation","type":"exact"},{"name":"protein amino acid phosphate-linked glycosylation","type":"exact"}],"termid":"GO:0042076"}


id: GO:1905184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:16950131","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein serine/threonine phosphatase activity (obsolete GO:1905184)","synonyms":[{"name":"activation of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"activation of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"positive regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"up-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"up-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"upregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"upregulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905184"}


id: PR:O42977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II assembly factor rtp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.08c","synonyms":[{"name":"Spom972h-rtp1","type":"exact"}],"termid":"PR:O42977"}


id: MONDO:0006146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma that is characterized by the presence of chondroid elements.","definition_xrefs":["NCIT:C42589"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroid hamartoma","secondary_identifiers":["MEDGEN:313028","UMLS:C1707390","EFO:1000175"],"termid":"MONDO:0006146","xrefs":{"Monarch":{"xref_id":"0006146"}}}


id: MONDO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile dermatomyositis (obsolete MONDO:0005054)","termid":"MONDO:0005054","xrefs":{"Monarch":{"xref_id":"0005054"}}}


id: PBO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 3 pseudogene","termid":"PBO:0048579"}


id: PBO:0017928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet2","termid":"PBO:0017928"}


id: GO:0040001
data:
  {"annotated_genes":["SJAG_00140","SJAG_02737","SJAG_02651","SJAG_00594","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104081,104413,116553,78104,96481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of the mitotic spindle to a specific location in the cell occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitotic spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030605","GO:0030606","GO:0030610","GO:0030608","GO:0018986"],"synonyms":[{"name":"establishment of mitotic spindle localisation","type":"exact"},{"name":"mitotic spindle positioning","type":"exact"},{"name":"mitotic spindle positioning and orientation","type":"narrow"},{"name":"mitotic spindle positioning or orientation","type":"exact"},{"name":"spindle positioning during mitosis","type":"related"},{"name":"spindle positioning involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0040001","terms_by_termid":{"GO:0000132":null}}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["UniProtKB:Q9UT52","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: GO:0140536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription corepressor activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Nuclear receptor corepressors often act by altering chromatin structure and modifications. For example, one class of transcription nuclear receptor corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:7566114","PMID:7566126","PMID:9238851"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor corepressor activity (obsolete GO:0140536)","synonyms":[{"name":"nuclear corepressor activity","type":"broad"}],"termid":"GO:0140536"}


id: MONDO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scott syndrome is an extremely rare congenital hemorrhagic disorder characterized by hemorrhagic episodes due to impaired platelet coagulant activity.","definition_xrefs":["Orphanet:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Scott syndrome","secondary_identifiers":["DOID:0111052","GARD:4777","icd11.foundation:186013982","SCTID:128098009","MEDGEN:167107","UMLS:C0796149","OMIM:262890","MESH:C563120","NANDO:2200671"],"synonyms":[{"name":"BDPLT7","type":"exact"},{"name":"Platelet factor X receptor deficiency","type":"related"},{"name":"SCTS","type":"exact"},{"name":"Scott syndrome","type":"exact"},{"name":"bleeding Abnormality due to deficiency of Platelet binding of Factor 10","type":"related"},{"name":"bleeding abnormality due to deficiency of platelet biding of factor X","type":"exact"},{"name":"bleeding disorder, Platelet-type, 7","type":"related"},{"name":"familial prothrombin consumption inhibitor","type":"exact"},{"name":"familial prothrombin conversion defect","type":"exact"},{"name":"platelet-type bleeding disorder 7","type":"exact"},{"name":"prothrombin consumption deficiency","type":"exact"},{"name":"prothrombin consumption inhibitor, familial","type":"related"},{"name":"prothrombin conversion defect, familial","type":"related"}],"termid":"MONDO:0009885","xrefs":{"Monarch":{"xref_id":"0009885"}}}


id: PBO:0067149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 199, pseudogene","termid":"PBO:0067149"}


id: MONDO:0004421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast papilloma characterized by the presence of predominant sclerosing architectural features.","definition_xrefs":["NCIT:C27944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing breast papilloma","secondary_identifiers":["DOID:7984","UMLS:C1335932","MEDGEN:233436"],"synonyms":[{"name":"Complex sclerosing papillary lesion","type":"exact"},{"name":"Complex sclerosing papillary lesion of the breast","type":"exact"},{"name":"sclerosing breast papilloma","type":"exact"}],"termid":"MONDO:0004421","xrefs":{"Monarch":{"xref_id":"0004421"}}}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: GO:0004463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + leukotriene A(4) = leukotriene B(4).","definition_xrefs":["RHEA:22324","EC:3.3.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"leukotriene-A4 hydrolase activity","secondary_identifiers":["Reactome:R-HSA-266072","KEGG_REACTION:R03057","MetaCyc:LEUKOTRIENE-A4-HYDROLASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6S)-5,6-epoxyicosa-7,9,11,14-tetraenoate hydrolase activity","type":"related"},{"name":"LTA-4 hydrolase activity","type":"related"},{"name":"LTA4 hydrolase activity","type":"related"},{"name":"LTA4H","type":"related"},{"name":"leukotriene A(4) hydrolase activity","type":"related"},{"name":"leukotriene A4 hydrolase activity","type":"related"}],"termid":"GO:0004463"}


id: PBO:0085504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has an extraribosomal function in regulation of RPS28B, in which Rps28Ap binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; homologous to mammalian ribosomal protein S28, no bacterial homolog; RPS28A has a paralog, RPS28B, that arose from the whole genome duplication","termid":"PBO:0085504"}


id: GO:0033625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"positively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin activation","synonyms":[{"name":"positive regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033625"}


id: FYPO:0003571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at the silenced mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PMID:18761674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at silent mating locus during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0003571"}


id: GO:0005655
data:
  {"annotated_genes":["SJAG_02553","SJAG_03234","SJAG_03796","SJAG_00955","SJAG_06613","SJAG_00306","SJAG_02547","SJAG_01623","SJAG_04582","SJAG_01369","SJAG_04916"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60959,64509,72935,73168,73504,90555,98997,104093,114903,114991,118220],"is_not":false,"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005730"],"is_obsolete":false,"name":"nucleolar ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleolar RNase P complex","type":"exact"}],"termid":"GO:0005655","terms_by_termid":{"GO:0005655":null}}


id: PBO:0042477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH3 antisense RNA 1","termid":"PBO:0042477"}


id: GO:0043964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host adenylate cyclase-mediated signal transduction (obsolete GO:0043964)","synonyms":[{"name":"positive regulation by symbiont of host adenylate cyclase-mediated signal transduction","type":"exact"}],"termid":"GO:0043964"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: PBO:0090156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm3","termid":"PBO:0090156"}


id: MONDO:0800098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by heterozygous variants in the SNRNP200 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"SNRNP200-related dominant retinopathy","synonyms":[{"name":"RP 33","type":"related"},{"name":"RP33","type":"narrow"},{"name":"SNRNP200 retinitis pigmentosa","type":"narrow"},{"name":"SNRNP200-related dominant retinopathy","type":"exact"},{"name":"retinitis pigmentosa 33","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in SNRNP200","type":"narrow"},{"name":"retinitis pigmentosa type 33","type":"narrow"}],"termid":"MONDO:0800098","xrefs":{"Monarch":{"xref_id":"0800098"}}}


id: PBO:0039807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 3","termid":"PBO:0039807"}


id: MONDO:0026187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic malformation syndrome with short stature (obsolete MONDO:0026187)","secondary_identifiers":["Orphanet:183570"],"termid":"MONDO:0026187","xrefs":{"Monarch":{"xref_id":"0026187"}}}


id: MONDO:1012507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barr-like polyradiculoneuropathy, non-human animal","termid":"MONDO:1011895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guillain-Barr-like polyradiculoneuropathy, dog","secondary_identifiers":["OMIA:002062-9615"],"termid":"MONDO:1012507","xrefs":{"Monarch":{"xref_id":"1012507"}}}


id: PBO:0062770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily X member 1 pseudogene","termid":"PBO:0062770"}


id: PR:O14140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02235","PANTHER:PTHR16771:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: MONDO:0014513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the LMOD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 10","secondary_identifiers":["MEDGEN:863797","OMIM:616165","GARD:16066","UMLS:C4015360","DOID:0110931"],"synonyms":[{"name":"LMOD3 nemaline myopathy","type":"exact"},{"name":"NEM10","type":"exact"},{"name":"nemaline myopathy 10","type":"exact"},{"name":"nemaline myopathy caused by mutation in LMOD3","type":"exact"},{"name":"nemaline myopathy type 10","type":"exact"}],"termid":"MONDO:0014513","xrefs":{"Monarch":{"xref_id":"0014513"}}}


id: MONDO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal akinesia deformation sequence (FADS) is a condition characterized by decreased fetal movement (fetal akinesia) as well as intra-uterine growth restriction (IUGR), multiple joint contractures (arthrogryposis), facial anomalies, underdevelopment of the lungs (pulmonary hypoplasia) and other developmental abnormalities. It is generally accepted that this condition is not a true diagnosis or a specific syndrome, but rather a description of a group of abnormalities resulting from fetal akinesia. About 30% of affected individuals are stillborn; many liveborn infants survive only a short time due to complications of pulmonary hypoplasia. FADS may be inherited in an autosomal recessive manner in some cases and may sometimes be caused by mutations in the RAPSN or DOK7 genes.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence","secondary_identifiers":["OMIMPS:208150","ICD9:754.89","MESH:C536647","DOID:0111375","NCIT:C129071","GARD:9634","SCTID:401138005"],"synonyms":[{"name":"FADS","type":"exact"},{"name":"arthrogryposis multiplex congenita with pulmonary hypoplasia","type":"related"},{"name":"arthrogryposis multiplex congenita-pulmonary hypoplasia syndrome","type":"exact"},{"name":"fetal akinesia deformation sequence","type":"exact"},{"name":"fetal akinesia sequence","type":"related"},{"name":"foetal akinesia sequence","type":"related"}],"termid":"MONDO:0008824","xrefs":{"Monarch":{"xref_id":"0008824"}}}


id: MONDO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 26 with or without anosmia","secondary_identifiers":["MEDGEN:1811919","UMLS:C5676903","OMIM:619718"],"synonyms":[{"name":"HH26","type":"exact"}],"termid":"MONDO:0030534","xrefs":{"Monarch":{"xref_id":"0030534"}}}


id: GO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["XAO:00002000","ZFA:0000151","GOC:bf","PMID:10535314","GOC:mtg_kidney_jan10","PMID:15968585","PMID:18322540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros development","synonyms":[{"name":"pronephric kidney development","type":"exact"}],"termid":"GO:0048793"}


id: MOD:01036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01181. Remap to MOD:01181.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01036 O-methyl aspartyl (obsolete MOD:01036)","termid":"MOD:01036"}


id: FYPO:0008323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 14 of histone H3 at one or more promoter regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation at promoter during vegetative growth","termid":"FYPO:0008323"}


id: MONDO:0011675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type A is a rare hereditary motor and sensory neuropathy characterized by intermediate motor median nerve conduction velocities (usually between 25 and 45 m/s) and signs of both demyelination and axonal degeneration in nerve biopsies. It presents with usual clinical features of Charcot-Marie-Tooth disease (progressive muscle weakness and atrophy of the distal extremities, distal sensory loss, reduced or absent deep tendon reflexes, and feet deformities) in the first to second decade of life with steady progression until the fourth decade, severe progression and stabilization afterwards.","definition_xrefs":["Orphanet:100043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth Disease, axonal, type 2GG","secondary_identifiers":["OMIM:606483","GARD:12437","MESH:C564702","SCTID:765744006","UMLS:C5561933","DOID:0110202","MEDGEN:1794143"],"synonyms":[{"name":"CMT2GG","type":"exact"},{"name":"CMTDIA","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate A","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate A","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy dominant intermediate A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate a","type":"related"},{"name":"DI-CMTA","type":"exact"},{"name":"Di-Cmta","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type A","type":"exact"}],"termid":"MONDO:0011675","xrefs":{"Monarch":{"xref_id":"0011675"}}}


id: MONDO:0020299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 15/16 (obsolete MONDO:0020299)","termid":"MONDO:0020299","xrefs":{"Monarch":{"xref_id":"0020299"}}}


id: PBO:0049884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 3","termid":"PBO:0049884"}


id: GO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dipeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dipeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035954)","synonyms":[{"name":"positive regulation of dipeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of dipeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035954"}


id: PBO:0083965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex regulatory subunit; binds GID Complex in response to glucose through interactions with complex member Vid28p; regulates fructose-1,6-bisphosphatase (FBPase) targeting to the vacuole; promotes proteasome-dependent catabolite degradation of FBPase; peripheral membrane protein located at Vid (vacuole import and degradation) vesicles","termid":"PBO:0083965"}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: MONDO:1012339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency, non-human animal","termid":"MONDO:1011699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency, sheep","secondary_identifiers":["OMIA:001235-9940"],"termid":"MONDO:1012339","xrefs":{"Monarch":{"xref_id":"1012339"}}}


id: PBO:0075697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 2","termid":"PBO:0075697"}


id: FYPO:0001654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal arginine import","synonyms":[{"name":"abnormal L-arginine import","type":"exact"},{"name":"abnormal L-arginine import across plasma membrane","type":"exact"},{"name":"abnormal arginine import during mitotic cell cycle","type":"related"},{"name":"abnormal arginine import during vegetative growth","type":"exact"},{"name":"abnormal arginine import into cell","type":"exact"},{"name":"abnormal arginine uptake","type":"exact"}],"termid":"FYPO:0001654"}


id: MONDO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation arising from the uterine corpus wall.","definition_xrefs":["NCIT:C40180"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"mixed endometrial stromal and smooth muscle tumor","termid":"MONDO:0004526"},{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus perivascular epithelioid cell tumor","secondary_identifiers":["UMLS:C1519862","MEDGEN:276940","ONCOTREE:UPECOMA","DOID:7437"],"synonyms":[{"name":"body of uterus neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"uterine corpus PEComa","type":"exact"},{"name":"uterine corpus perivascular epithelioid cell tumor","type":"exact"},{"name":"uterine perivascular epithelioid cell tumor","type":"related"},{"name":"uterine perivascular epithelioid cell tumour","type":"related"},{"name":"uterus perivascular epithelioid cell tumor","type":"related"},{"name":"uterus perivascular epithelioid cell tumour","type":"related"}],"termid":"MONDO:0004221","xrefs":{"Monarch":{"xref_id":"0004221"}}}


id: GO:0006045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylglucosamine metabolic process","termid":"GO:0006044"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine biosynthetic process","synonyms":[{"name":"N-acetylglucosamine anabolism","type":"exact"},{"name":"N-acetylglucosamine biosynthesis","type":"exact"},{"name":"N-acetylglucosamine formation","type":"exact"},{"name":"N-acetylglucosamine synthesis","type":"exact"}],"termid":"GO:0006045"}


id: PBO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA trimethylguanosine capped","termid":"PBO:0007356"}


id: PBO:0014255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulinase pombe homologue 1","termid":"PBO:0014255"}


id: PBO:0054829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2242","termid":"PBO:0054829"}


id: MOD:01354
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["PubMed:11698400","Unimod:149#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01354"}


id: PBO:0085223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate synthase; also known as pantoate-beta-alanine ligase, required for pantothenic acid biosynthesis, deletion causes pantothenic acid auxotrophy, homologous to E. coli panC","termid":"PBO:0085223"}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


