# terms

id: MONDO:0013033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spastic quadriplegia in which the cause of the disease is a mutation in the KANK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic quadriplegic cerebral palsy","termid":"MONDO:0016215"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"cerebral palsy, spastic quadriplegic, 2","secondary_identifiers":["DOID:0081360","OMIM:612900","MESH:C567867","GARD:18309","UMLS:C2752061","MEDGEN:442880"],"synonyms":[{"name":"CPSQ2","type":"related"},{"name":"KANK1 spastic quadriplegia","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 2","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, type 2","type":"exact"},{"name":"spastic quadriplegia caused by mutation in KANK1","type":"exact"}],"termid":"MONDO:0013033","xrefs":{"Monarch":{"xref_id":"0013033"}}}


id: FYPO:0000479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"premature meiosis","synonyms":[{"name":"advanced meiosis","type":"exact"},{"name":"meiosis: premature","type":"related"},{"name":"premature meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000479"}


id: MONDO:0013391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal neurodegenerative disorder characterized by spasmodic torticollis, dystonic head tremor, intention tremor, nystagmus, hyposmia, and hypergonadotrophic hypogonadism with azoospermia. Slight cerebellar signs (left-sided intention tremor, balance and gait impairment) are also noted. Magnetic resonance imaging (MRI) shows bilateral hyperintense signals in the thalamus, butterfly-like lesions in the pons, and lesions in the occipital region, whereas nerve conduction studies of the lower extremities shows a predominantly motor and slight sensory neuropathy.","definition_xrefs":["Orphanet:163684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005559"],"is_obsolete":false,"name":"sterol carrier protein 2 deficiency","secondary_identifiers":["GARD:12471","UMLS:C3150990","OMIM:613724","MEDGEN:462340","NANDO:1200767"],"synonyms":[{"name":"LKDMN","type":"related"},{"name":"SCP2 deficiency","type":"exact"},{"name":"leukoencephalopathy - dystonia - motor neuropathy","type":"related"},{"name":"leukoencephalopathy with dystonia and motor neuropathy","type":"related"},{"name":"leukoencephalopathy-dystonia-motor neuropathy syndrome","type":"exact"},{"name":"sterol carrier protein 2 deficiency","type":"exact"}],"termid":"MONDO:0013391","xrefs":{"Monarch":{"xref_id":"0013391"}}}


id: GO:0160231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-based cell projection extending laterally from the basolateral membrane of tuft cells in epithelial tissues, including the intestinal epithelium. These thin projections, typically 3-4 per cell and up to 3 micron long, directly contact the nuclei of adjacent epithelial cells, potentially facilitating intercellular communication and molecular exchange.","definition_xrefs":["PMID:28490731","PMID:37863104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytospinule","termid":"GO:0160231"}


id: PBO:0063993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 27","termid":"PBO:0063993"}


id: FYPO:0005984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the dye Congo Red. Cells stop growing (and may die) at a concentration of Congo Red that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to Congo Red","synonyms":[{"name":"hypersensitive to Congo Red","type":"exact"},{"name":"sensitive to Congo Red during mitotic cell cycle","type":"related"},{"name":"sensitive to Congo Red during vegetative growth","type":"exact"}],"termid":"FYPO:0005984"}


id: FYPO:0007086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated when the cell is subject to sulfur starvation.","definition_xrefs":["PMID:28388826","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated vegetative cell during sulfur starvation","synonyms":[{"name":"elongated cell during sulfur starvation during vegetative growth","type":"exact"},{"name":"elongated vegetative cell during cellular response to sulfur starvation","type":"exact"},{"name":"elongated vegetative cell during sulfur starvation during mitotic cell cycle","type":"related"},{"name":"elongated vegetative cell during sulphur starvation","type":"exact"}],"termid":"FYPO:0007086"}


id: GO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron fate commitment","termid":"GO:0003359"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron fate commitment involved in brainstem development","termid":"GO:0003362"}


id: PBO:0083803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that associates with contractile actomyosin ring; required for ingression of the plasma membrane into the bud neck during cytokinesis; C2 domain, a membrane targeting module, is required for function; activates chitin synthase activity of Chs2p during cytokinesis","termid":"PBO:0083803"}


id: PR:Q9UT91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmp1 gene.","definition_xrefs":["UniProtKB:Q9UT91","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP protein subunit rmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.08","synonyms":[{"name":"RNA-processing protein rmp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rmp1","type":"exact"}],"termid":"PR:Q9UT91"}


id: PBO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain protein Mug57","termid":"PBO:0016997"}


id: PBO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex Yth1","termid":"PBO:0000415"}


id: MONDO:0019129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of global developmental delay, osteopenia and skin anomalies.","definition_xrefs":["Orphanet:73223"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay-osteopenia-ectodermal defect syndrome","secondary_identifiers":["GARD:18919","MEDGEN:929239","UMLS:C4303570","SCTID:717813005"],"termid":"MONDO:0019129","xrefs":{"Monarch":{"xref_id":"0019129"}}}


id: PBO:0044038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 10","termid":"PBO:0044038"}


id: PBO:0054720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2129","termid":"PBO:0054720"}


id: MONDO:0007132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-ectrodactyly","secondary_identifiers":["MESH:C566277","MEDGEN:354849","UMLS:C1862843","OMIM:106900"],"synonyms":[{"name":"anonychia ectrodactyly","type":"related"},{"name":"anonychia-ectrodactyly","type":"exact"}],"termid":"MONDO:0007132","xrefs":{"Monarch":{"xref_id":"0007132"}}}


id: MONDO:0700194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a chicken.","definition_xrefs":["NCIT:C135004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken lymphoma","termid":"MONDO:0700194","xrefs":{"Monarch":{"xref_id":"0700194"}}}


id: PBO:0045373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH6 divergent transcript","termid":"PBO:0045373"}


id: MONDO:0975842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 96","secondary_identifiers":["OMIM:621001"],"termid":"MONDO:0975842","xrefs":{"Monarch":{"xref_id":"0975842"}}}


id: PBO:0061200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor","termid":"PBO:0061200"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: MONDO:0013497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Okt4 epitope deficiency","secondary_identifiers":["UMLS:C3151379","OMIM:613949","MEDGEN:462729"],"synonyms":[{"name":"Okt4 epitope deficiency","type":"exact"},{"name":"T4 epitope deficiency","type":"related"}],"termid":"MONDO:0013497","xrefs":{"Monarch":{"xref_id":"0013497"}}}


id: PBO:0078669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-4","termid":"PBO:0078669"}


id: PBO:0082694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatin remodeling complex; critical for INO80 function; involved in regulation of chromosome segregation and maintenance of normal centromeric chromatin structure; human ortholog INO80C is a member of the human INO80 complex; implicated in DNA repair based on genetic interactions with RAD52 epistasis genes","termid":"PBO:0082694"}


id: MONDO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesocardia","secondary_identifiers":["ICD9:746.87","HP:0011599","SCTID:16567006","GARD:19259","UMLS:C0265865","icd11.foundation:1251061251","MEDGEN:488817","Orphanet:95443"],"synonyms":[{"name":"Midline heart","type":"exact"},{"name":"mesocardia","type":"exact"},{"name":"mesocardia (disease)","type":"exact"}],"termid":"MONDO:0019807","xrefs":{"Monarch":{"xref_id":"0019807"}}}


id: GO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric nephron tubule are generated and organized. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"is_a","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}


id: MONDO:0003828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces growth hormone. It may be associated with acromegaly.","definition_xrefs":["NCIT:C5963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"functioning pituitary gland neoplasm","termid":"MONDO:0003604"},{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"pituitary cancer","termid":"MONDO:0002109"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"growth hormone-producing pituitary gland neoplasm","termid":"MONDO:0019927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"growth hormone-producing pituitary gland carcinoma","secondary_identifiers":["DOID:6256","UMLS:C1334587","MEDGEN:277331"],"synonyms":[{"name":"Growth hormone producing pituitary gland carcinoma","type":"exact"},{"name":"Growth hormone-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumor","type":"exact"},{"name":"malignant Growth hormone producing pituitary tumour","type":"exact"},{"name":"malignant Growth hormone producing tumor","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant Growth hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumor","type":"exact"},{"name":"malignant Growth hormone secreting pituitary tumour","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant Growth hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary","type":"exact"},{"name":"malignant Somatotrophinoma of pituitary gland","type":"exact"},{"name":"malignant Somatotrophinoma of the pituitary gland","type":"exact"},{"name":"malignant pituitary Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland Somatotrophinoma","type":"exact"},{"name":"malignant pituitary gland somatotropinoma","type":"exact"},{"name":"malignant pituitary somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma","type":"exact"},{"name":"malignant somatotropinoma of pituitary","type":"exact"},{"name":"malignant somatotropinoma of pituitary gland","type":"exact"},{"name":"malignant somatotropinoma of the pituitary","type":"exact"},{"name":"malignant somatotropinoma of the pituitary gland","type":"exact"}],"termid":"MONDO:0003828","xrefs":{"Monarch":{"xref_id":"0003828"}}}


id: PBO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 80 pseudogene","termid":"PBO:0070166"}


id: GO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + acetyl-CoA = CMP-N-acetyl-9-O-acetyl-beta-neuraminate + CoA.","definition_xrefs":["RHEA:81827","EC:2.3.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"N-acetylneuraminate 9-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.45-RXN"],"synonyms":[{"name":"N-acetylneuraminate 7(8)-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7,8-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"exact"},{"name":"N-acetylneuraminate O7-(or O9-)acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- and/or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(7)-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(or 7)-O-acetyltransferase activity","type":"related"},{"name":"glycoprotein 7(9)-O-acetyltransferase activity","type":"related"},{"name":"sialate O-acetyltransferase","type":"broad"}],"termid":"GO:0047186"}


id: GO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of gravity in which a sensory mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of gravity","termid":"GO:0009590"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of gravity","termid":"GO:0070998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of gravity","termid":"GO:0070999"}


id: PBO:0056920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY family member 4B","termid":"PBO:0056920"}


id: PBO:0087695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing","termid":"PBO:0087695"}


id: GO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate catabolic process","synonyms":[{"name":"formate breakdown","type":"exact"},{"name":"formate catabolism","type":"exact"},{"name":"formate degradation","type":"exact"},{"name":"formic acid catabolic process","type":"exact"},{"name":"formic acid catabolism","type":"exact"}],"termid":"GO:0042183"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: GO:0000041
data:
  {"annotated_genes":["SJAG_03079","SJAG_00328","SJAG_04260","SJAG_01493","SJAG_01803","SJAG_04677","SJAG_02735","SJAG_01007","SJAG_01119","SJAG_01078","SJAG_02473","SJAG_04867","SJAG_04743","SJAG_02399","SJAG_04096","SJAG_03231","SJAG_04737","SJAG_04675","SJAG_02834","SJAG_00222","SJAG_00547","SJAG_02457","SJAG_01990","SJAG_03667","SJAG_04830","SJAG_04185","SJAG_04246","SJAG_03528","SJAG_03497","SJAG_02968","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[107407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[80449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[87390,114188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[69420,62980,103314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[104251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[103315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[113385,97585,72023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[112802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[79709,77523,62180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[62181,72549,108231,65042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[81711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[91923,79493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[62894,62566,71068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[113942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[112803,103705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[93248,93249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[103845,76506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[80091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of transition metal ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00547":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03231":null,"SJAG_03497":null,"SJAG_03528":null,"SJAG_03667":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04830":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"transition metal ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"transition metal transport","type":"exact"}],"termid":"GO:0000041","terms_by_termid":{"GO:0006825":null,"GO:0015677":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0035434":null,"GO:0036249":null,"GO:0048250":null,"GO:0060003":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0097430":null,"GO:0098705":null,"GO:0098711":null,"GO:0098716":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1904257":null}}


id: FYPO:0007099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal spindle elongation in meiosis I","synonyms":[{"name":"normal meiotic spindle elongation in first meiotic nuclear division","type":"exact"},{"name":"normal meiotic spindle elongation in meiosis I","type":"exact"}],"termid":"FYPO:0007099"}


id: FYPO:0002044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished premeiotic DNA replication","synonyms":[{"name":"absent premeiotic DNA replication","type":"exact"},{"name":"premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0002044"}


id: MONDO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 1A (CMT1A) is a type ofinherited neurological disorder that affects the peripheral nerves. Affected individuals experience weakness and wasting (atrophy) of the muscles of the lower legs beginning in adolescence; later they experience hand weakness and sensory loss. CMT1A is caused byhaving an extra copy (a duplication) of the PMP22 gene. It is inherited in an autosomal dominant manner. Treatment for this condition may include physical therapy ; occupational therapy ; braces and other orthopedic devices; orthopedic surgery;and pain medications.","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1A","secondary_identifiers":["DECIPHER:29","GARD:1245","OMIM:118220","DOID:0110148","MEDGEN:75727","NCIT:C75468","Orphanet:101081","UMLS:C0270911"],"synonyms":[{"name":"CMT 1A","type":"related"},{"name":"CMT1A","type":"exact"},{"name":"Charcot Marie Tooth disease type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth syndrome type 1A","type":"exact"},{"name":"HMSN 1A","type":"related"},{"name":"HMSN1A","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1A","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1A","type":"exact"},{"name":"microduplication 17p12","type":"exact"}],"termid":"MONDO:0007309","xrefs":{"Monarch":{"xref_id":"0007309"}}}


id: GO:0007451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between dorsal and ventral compartments that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:bf","PMID:9374402","PMID:10625531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc lineage restriction","termid":"GO:0035161"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation, imaginal disc","termid":"GO:0007450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral lineage restriction, imaginal disc","synonyms":[{"name":"dorsal-ventral lineage restriction, imaginal disc","type":"exact"},{"name":"dorsoventral lineage restriction, imaginal disc","type":"exact"}],"termid":"GO:0007451"}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: GO:1903382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:23453807","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902236"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903381"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903382"}


id: GO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + azole(in) = H+(in) + azole(out). Azoles are heterocyclic compounds found in many biologically important substances.","definition_xrefs":["ISBN:3527307206","Wikipedia:Azole","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"azole:proton antiporter activity","synonyms":[{"name":"azole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0045119"}


id: FYPO:0006353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere central core are present at greater levels than normal. Normally, the central core is not transcribed.","definition_xrefs":["PMID:23267073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased centromere central core transcript level","synonyms":[{"name":"accumulation of centromere central core-derived RNA transcripts","type":"related"},{"name":"increased centromere central core RNA level","type":"exact"},{"name":"increased centromere central core-derived RNA accumulation","type":"related"},{"name":"increased centromere central core-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased centromere central core-derived RNA level during vegetative growth","type":"exact"},{"name":"increased centromere central core-derived RNA transcript level","type":"exact"},{"name":"increased centromeric core transcript level","type":"exact"}],"termid":"FYPO:0006353"}


id: PBO:0041154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 9","termid":"PBO:0041154"}


id: GO:0031444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within slow-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The slow-twitch skeletal muscle is characterized by slow time parameters, low force development and resistance to fatigue.","definition_xrefs":["GOC:ef","GOC:mah","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"slow-twitch skeletal muscle fibre contraction","type":"exact"}],"termid":"GO:0031444"}


id: PBO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in nucleocytoplasmic transport Syo2 (predicted)","termid":"PBO:0018012"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity (obsolete GO:0102326)","termid":"GO:0102326"}


id: PBO:0077195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM2 domain containing 3","termid":"PBO:0077195"}


id: MONDO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schmitt-Gillenwater-Kelly syndrome (obsolete MONDO:0042915)","termid":"MONDO:0042915","xrefs":{"Monarch":{"xref_id":"0042915"}}}


id: GO:0032330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chondrocyte differentiation","termid":"GO:0032330"}


id: MOD:01504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01504"}


id: GO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of ubiquitin transferase activity.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC activation","type":"narrow"},{"name":"APC activator","type":"narrow"},{"name":"SCF complex activator","type":"narrow"},{"name":"activation of ubiquitin transferase activity","type":"narrow"},{"name":"anaphase promoting complex activator","type":"narrow"},{"name":"anaphase-promoting complex activator","type":"narrow"},{"name":"positive regulation of ubiquitin transferase activity","type":"exact"},{"name":"stimulation of ubiquitin transferase activity","type":"narrow"},{"name":"ubiquitin transferase activator","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity","type":"related"},{"name":"up-regulation of ubiquitin transferase activity","type":"exact"},{"name":"upregulation of ubiquitin transferase activity","type":"exact"}],"termid":"GO:0051443"}


id: MONDO:0957430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"childhood-onset schizophrenia","secondary_identifiers":["Orphanet:641496","UMLS:C0036346","MEDGEN:48576","GARD:4766"],"termid":"MONDO:0957430","xrefs":{"Monarch":{"xref_id":"0957430"}}}


id: MONDO:0016583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"volvulus of midgut","termid":"MONDO:0008666"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial intestinal malrotation-facial anomalies syndrome","secondary_identifiers":["Orphanet:2454"],"synonyms":[{"name":"Stalker Chitayat syndrome","type":"related"},{"name":"Stalker-Chitayat syndrome","type":"exact"},{"name":"intestinal malrotation facial anomalies familial type","type":"related"}],"termid":"MONDO:0016583","xrefs":{"Monarch":{"xref_id":"0016583"}}}


id: MONDO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of basal cell carcinoma presenting as a pale, indurated plaque, usually in the upper trunk or face. Morphologically, it is characterized by the presence of strands, cords, and columns of basaloid cells infiltrating the dermis. Perineural invasion may be present and the basaloid cell infiltrate may extend into deeper tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin infiltrative basal cell carcinoma","secondary_identifiers":["UMLS:C0334257","MEDGEN:87201","DOID:4299","ICDO:8092/3","NCIT:C27539"],"synonyms":[{"name":"infiltrating basal cell carcinoma","type":"exact"},{"name":"infiltrative basal cell carcinoma","type":"related"},{"name":"skin infiltrating basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002953","xrefs":{"Monarch":{"xref_id":"0002953"}}}


id: PBO:0084043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI lipid remodelase; responsible for introducing ceramides into GPI anchors having a C26:0 fatty acid in sn-2 of the glycerol moiety; can also use lyso-GPI protein anchors and various base resistant lipids as substrates; contains 14-16 transmembrane segments and several putative glycosylation and phosphorylation sites; null mutation is synthetically lethal with pkc1 deletion","termid":"PBO:0084043"}


id: PBO:0065035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 1","termid":"PBO:0065035"}


id: MONDO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis","secondary_identifiers":["EFO:0009626","MedDRA:10062499","HP:0002021","MEDGEN:18780","MESH:D011707","SCTID:367403001","UMLS:C0034194","MESH:D017219","DOID:3122","DOID:12639"],"synonyms":[{"name":"GOO","type":"exact"},{"name":"gastric outflow obstruction","type":"exact"},{"name":"gastric outlet obstruction","type":"exact"},{"name":"pyloric stenosis","type":"exact"},{"name":"pyloric stenosis (disease)","type":"exact"}],"termid":"MONDO:0001561","xrefs":{"Monarch":{"xref_id":"0001561"}}}


id: MONDO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital hypothyroidism (obsolete MONDO:0000311)","termid":"MONDO:0000311","xrefs":{"Monarch":{"xref_id":"0000311"}}}


id: GO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the adult male tail tip is generated and organized. In some species of rhabitid nematodes, the male tail tip undergoes a morphological change such that the most posterior hypodermal cells in the tail (hyp8-11 in C. elegans) fuse and retract anteriorly, changing the shape of the tail from a pointed, tapered cone, or spike, to a rounded, blunt dome.","definition_xrefs":["PMID:21408209","PMID:18050419","PMID:16806150","PMID:7409314","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode male tail tip morphogenesis","synonyms":[{"name":"male tail morphogenesis","type":"broad"},{"name":"male tail tip morphogenesis","type":"related"},{"name":"tail tip morphogenesis","type":"related"}],"termid":"GO:0045138"}


id: PBO:0040897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 ribosome biogenesis factor","termid":"PBO:0040897"}


id: MONDO:0022883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial and skeletal defects","termid":"MONDO:0022883","xrefs":{"Monarch":{"xref_id":"0022883"}}}


id: PBO:0073194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W pseudogene 1","termid":"PBO:0073194"}


id: PBO:0044898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribose-phosphate aldolase","termid":"PBO:0044898"}


id: GO:1905946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to calcium ion.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:TermGenie","GO_REF:0000058","PMID:11404397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to calcium ion","termid":"GO:1905945"},{"relation_name":"negatively_regulates","term_name":"response to calcium ion","termid":"GO:0051592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to calcium ion","synonyms":[{"name":"down regulation of response to Ca2+ ion","type":"exact"},{"name":"down regulation of response to calcium ion","type":"exact"},{"name":"down-regulation of response to Ca2+ ion","type":"exact"},{"name":"down-regulation of response to calcium ion","type":"exact"},{"name":"downregulation of response to Ca2+ ion","type":"exact"},{"name":"downregulation of response to calcium ion","type":"exact"},{"name":"inhibition of response to Ca2+ ion","type":"narrow"},{"name":"inhibition of response to calcium ion","type":"narrow"},{"name":"negative regulation of response to Ca2+ ion","type":"exact"}],"termid":"GO:1905946"}


id: GO:0044812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fermentation of organic substances with a net release of hydrogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"fermentative hydrogen production","secondary_identifiers":["Wikipedia:Fermentative_hydrogen_production"],"synonyms":[{"name":"carbohydrate fermentation","type":"exact"}],"termid":"GO:0044812"}


id: MONDO:0020471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary adenoma (obsolete MONDO:0020471)","termid":"MONDO:0020471","xrefs":{"Monarch":{"xref_id":"0020471"}}}


id: PBO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 6","termid":"PBO:0047650"}


id: PBO:0075793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 11 pseudogene 1","termid":"PBO:0075793"}


id: MONDO:0005665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial or complete paralysis of the facial muscles of one side of a person's face. It is caused by damage to the seventh cranial nerve. It is usually temporary but it may recur.","definition_xrefs":["NCIT:C26769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial paralysis","termid":"MONDO:0001835"},{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bell's palsy","secondary_identifiers":["MEDGEN:87660","ICD9:351.0","UMLS:C0376175","SCTID:193093009","Orphanet:2810","MESH:D020330","DOID:12506","EFO:0007167","ICD10CM:G51.0"],"synonyms":[{"name":"Bell palsy","type":"exact"},{"name":"Bell's (facial) palsy","type":"exact"},{"name":"facial nerve palsy","type":"exact"},{"name":"facial nerve paralysis","type":"exact"},{"name":"facial palsy","type":"related"},{"name":"nerve paralysis, Facial","type":"exact"},{"name":"palsy of facial nerve","type":"exact"},{"name":"paralysis Of Facial nerve","type":"exact"}],"termid":"MONDO:0005665","xrefs":{"Monarch":{"xref_id":"0005665"}}}


id: PBO:0064904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit gamma","termid":"PBO:0064904"}


id: GO:2000999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"positively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellulose catabolic process","synonyms":[{"name":"positive regulation of cellulose breakdown","type":"exact"},{"name":"positive regulation of cellulose catabolism","type":"exact"},{"name":"positive regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000999"}


id: PBO:0077953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 11-1","termid":"PBO:0077953"}


id: GO:0098576
data:
  {"annotated_genes":["SJAG_00852","SJAG_MIT09","SJAG_05204","SJAG_MIT37","SJAG_04363","SJAG_03925","SJAG_02598","SJAG_03656","SJAG_00915","SJAG_00797","SJAG_00334","SJAG_00437","SJAG_04952","SJAG_02564","SJAG_MIT15","SJAG_01806","SJAG_00438","SJAG_00133","SJAG_04583","SJAG_01249","SJAG_03282","SJAG_00836","SJAG_00985","SJAG_00077","SJAG_01950","SJAG_03764","SJAG_04122","SJAG_07003","SJAG_02105","SJAG_00542","SJAG_03114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103289,99971],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[97893,104550,77806,89837,99295,108861,90597,99507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[93291,104554,107454,88956,101341,107362,118696,93343,89418,118701,103178,95748,92325,92752,118690,88589,103204,94334,102561,115445,108352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"Any side (leaflet) of a membrane that faces the lumen of an organelle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00133":null,"SJAG_00334":null,"SJAG_00437":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00797":null,"SJAG_00836":null,"SJAG_00852":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_01950":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03282":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04363":null,"SJAG_04583":null,"SJAG_04952":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lumenal side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098576","terms_by_termid":{"GO:0098553":null,"GO:0099616":null,"GO:0099617":null}}


id: PBO:0076260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin family member 2, pseudogene","termid":"PBO:0076260"}


id: GO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells of the B-1 subset such that the total number of B-1 B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell homeostasis","synonyms":[{"name":"B-1 B lymphocyte homeostasis","type":"exact"},{"name":"B-1 B-cell homeostasis","type":"exact"},{"name":"B-1 B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001922"}


id: GO:0030666
data:
  {"annotated_genes":["SJAG_01167","SJAG_00800","SJAG_02805","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58571,76221,107893,80046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030666","terms_by_termid":{"GO:0030122":null}}


id: MONDO:0013091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver PhK deficiency caused by variants in the PHKG2 gene","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"},{"relation_name":"is_a","term_name":"glycogen storage disease IX","termid":"MONDO:0700291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792","MONDO:0002515"],"is_obsolete":false,"name":"glycogen storage disease IXc","secondary_identifiers":["MESH:C567809","NANDO:2201166","UMLS:C2751643","DOID:0111043","OMIM:613027","MEDGEN:442778","GARD:18387","NANDO:1200849"],"synonyms":[{"name":"GSD IXc","type":"related"},{"name":"GSD type 9C","type":"exact"},{"name":"GSD type IXc","type":"exact"},{"name":"GSD9C","type":"exact"},{"name":"PHKG2 glycogen storage disease","type":"exact"},{"name":"PHKG2-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease IXc","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKG2","type":"exact"},{"name":"glycogen storage disease type IXc","type":"exact"}],"termid":"MONDO:0013091","xrefs":{"Monarch":{"xref_id":"0013091"}}}


id: PBO:0082569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; subunit of a clamp loader that loads Rad17p-Mec3p-Ddc1p onto DNA; homolog of human and S. pombe Rad17 protein","termid":"PBO:0082569"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["PMID:9550716","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: MOD:01767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-131 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01767"}


id: GO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of zoospore movement on or near host (obsolete GO:0075237)","termid":"GO:0075237"}


id: PR:Q09920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fio1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron transport multicopper oxidase fio1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.08","synonyms":[{"name":"Spom972h-fio1","type":"exact"}],"termid":"PR:Q09920"}


id: PBO:0089898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp1","termid":"PBO:0089898"}


id: MONDO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Von Willebrand disease, X-linked form","secondary_identifiers":["MEDGEN:333255","OMIM:314560","MESH:C564041","UMLS:C1839113"],"synonyms":[{"name":"Von Willebrand disease, X-linked","type":"related"},{"name":"Von Willebrand disease, X-linked form","type":"exact"}],"termid":"MONDO:0010756","xrefs":{"Monarch":{"xref_id":"0010756"}}}


id: PBO:0029078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-third_meiotic_division","termid":"PBO:0029078"}


id: _global:capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"_global:capable_of_part_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","secondary_identifiers":["RO:0002215"],"termid":"_global:capable_of"}


id: PBO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0017600"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: PBO:0116268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNP structure for efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may suppress transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs; binds G-quadruplex (G4) nucleic acids","termid":"PBO:0116268"}


id: GO:0016127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sterol catabolic process","synonyms":[{"name":"sterol breakdown","type":"exact"},{"name":"sterol catabolism","type":"exact"},{"name":"sterol degradation","type":"exact"}],"termid":"GO:0016127"}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: PBO:0063017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 5","termid":"PBO:0063017"}


id: PBO:0045617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 28 (pseudogene)","termid":"PBO:0045617"}


id: PBO:0057914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3617","termid":"PBO:0057914"}


id: MONDO:0010916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the GANAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 3 with or without polycystic liver disease","secondary_identifiers":["UMLS:C3887964","MEDGEN:854672","GARD:18598","OMIM:600666","DOID:0110860"],"synonyms":[{"name":"APKD3","type":"exact"},{"name":"Apkd3","type":"exact"},{"name":"GANAB autosomal dominant polycystic kidney disease","type":"exact"},{"name":"PKD3","type":"exact"},{"name":"Pkd3","type":"exact"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in GANAB","type":"exact"},{"name":"polycystic kidney disease 3","type":"exact"},{"name":"polycystic kidney disease 3 with or without polycystic liver disease","type":"exact"},{"name":"polycystic kidney disease 3, autosomal dominant","type":"exact"},{"name":"polycystic kidney disease type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type III","type":"exact"},{"name":"polycystic kidney disease, type 3","type":"exact"}],"termid":"MONDO:0010916","xrefs":{"Monarch":{"xref_id":"0010916"}}}


id: GO:0160202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural component of the microsporidian spore's invasion apparatus that is located at the anterior end of the spore and serves to attach the polar tube to the inside of the spore wall.","definition_xrefs":["PMID:16005007","PMID:19673893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar tube anchoring disc","termid":"GO:0160202"}


id: PBO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RNF4","termid":"PBO:0001118"}


id: PBO:0075312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 4","termid":"PBO:0075312"}


id: MONDO:0020421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronary artery intramyocardial course","secondary_identifiers":["Orphanet:99085","UMLS:C0948355","MEDGEN:182684"],"termid":"MONDO:0020421","xrefs":{"Monarch":{"xref_id":"0020421"}}}


id: PBO:0072042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 12","termid":"PBO:0072042"}


id: GO:0018410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The alteration of the C-terminal amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein amino acid modification","synonyms":[{"name":"peptide or protein carboxyl-terminal blocking","type":"related"},{"name":"peptide/protein carboxyl-terminal blocking","type":"related"}],"termid":"GO:0018410"}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["PubMed:23434852","RESID:AA0613","ChEBI:136763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: GO:0048002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen","synonyms":[{"name":"antigen presentation, peptide antigen","type":"exact"},{"name":"peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0048002"}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: PBO:0056878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial contact site and cristae organizing system subunit 10","termid":"PBO:0056878"}


id: GO:0070590
data:
  {"annotated_genes":["SJAG_04483","SJAG_01321","SJAG_00974","SJAG_03057","SJAG_03013","SJAG_04238","SJAG_04184","SJAG_03587","SJAG_04236","SJAG_03483","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87665,88159,89711,91247],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[108639,117399,117391,113678,103700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a spore wall. A spore wall is the specialized cell wall lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"part_of","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"spore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070590","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: GO:1900691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"positively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gliotoxin biosynthetic process","synonyms":[{"name":"activation of gliotoxin anabolism","type":"exact"},{"name":"activation of gliotoxin biosynthesis","type":"exact"},{"name":"activation of gliotoxin biosynthetic process","type":"narrow"},{"name":"activation of gliotoxin formation","type":"exact"},{"name":"activation of gliotoxin synthesis","type":"exact"},{"name":"positive regulation of gliotoxin anabolism","type":"exact"},{"name":"positive regulation of gliotoxin biosynthesis","type":"exact"},{"name":"positive regulation of gliotoxin formation","type":"exact"},{"name":"positive regulation of gliotoxin synthesis","type":"exact"},{"name":"up regulation of gliotoxin anabolism","type":"exact"},{"name":"up regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up regulation of gliotoxin formation","type":"exact"},{"name":"up regulation of gliotoxin synthesis","type":"exact"},{"name":"up-regulation of gliotoxin anabolism","type":"exact"},{"name":"up-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up-regulation of gliotoxin formation","type":"exact"},{"name":"up-regulation of gliotoxin synthesis","type":"exact"},{"name":"upregulation of gliotoxin anabolism","type":"exact"},{"name":"upregulation of gliotoxin biosynthesis","type":"exact"},{"name":"upregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"upregulation of gliotoxin formation","type":"exact"},{"name":"upregulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900691"}


id: PBO:0066984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 287","termid":"PBO:0066984"}


id: PBO:0027173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_phleomycin","termid":"PBO:0027173"}


id: PBO:0090041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-plasma membrane tethering protein Ltc2","termid":"PBO:0090041"}


id: FYPO:0006544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during mitosis. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during mitosis","synonyms":[{"name":"decreased transcription during cellular response to calcium ion during mitotic M phase","type":"related"},{"name":"decreased transcription during mitosis during vegetative growth","type":"exact"},{"name":"decreased transcription during mitotic nuclear division","type":"exact"},{"name":"reduced transcription during mitosis","type":"exact"}],"termid":"FYPO:0006544"}


id: MONDO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor nerve neuritis","termid":"MONDO:0004004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"asymmetric motor neuropathy","secondary_identifiers":["UMLS:C1332341","NCIT:C27953","DOID:7559","MEDGEN:231082"],"termid":"MONDO:0004280","xrefs":{"Monarch":{"xref_id":"0004280"}}}


id: MONDO:0006985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subependymoma (obsolete MONDO:0006985)","termid":"MONDO:0006985","xrefs":{"Monarch":{"xref_id":"0006985"}}}


id: PBO:0054684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2092","termid":"PBO:0054684"}


id: GO:0031249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a denatured protein.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"denatured protein binding","termid":"GO:0031249"}


id: GO:0044377
data:
  {"annotated_genes":["SJAG_04009","SJAG_05153"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106609,108381],"is_not":false,"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:jl","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding, bending","type":"related"}],"termid":"GO:0044377","terms_by_termid":{"GO:0044377":null}}


id: GO:0097092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["PMID:19729090","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose metabolic process","synonyms":[{"name":"polyacyltrehalose metabolism","type":"exact"}],"termid":"GO:0097092"}


id: GO:0004477
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77468,78355],"is_not":false,"summary":null,"term":"GO:0004477"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate.","definition_xrefs":["EC:3.5.4.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"methenyltetrahydrofolate cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6801328","RHEA:23700","Reactome:R-HSA-200740","MetaCyc:METHENYLTHFCYCLOHYDRO-RXN","Reactome:R-HSA-200661"],"synonyms":[{"name":"5,10-methenyl-THF cyclohydrolase activity","type":"exact"},{"name":"5,10-methenyltetrahydrofolate 5-hydrolase (decyclizing)","type":"related"},{"name":"citrovorum factor cyclodehydrase activity","type":"related"},{"name":"formyl-methenyl-methylenetetrahydrofolate synthetase (combined)","type":"related"}],"termid":"GO:0004477","terms_by_termid":{"GO:0004477":null}}


id: MONDO:0007189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete B-cell growth factor (obsolete MONDO:0007189)","secondary_identifiers":["OMIM:109540"],"synonyms":[{"name":"B-cell growth Factor 1","type":"related"},{"name":"B-cell growth factor","type":"exact"},{"name":"BCGF","type":"related"}],"termid":"MONDO:0007189","xrefs":{"Monarch":{"xref_id":"0007189"}}}


id: GO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane potential","termid":"GO:0086036"}


id: GO:0035632
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex composed of two proteins, prohibitin 1 and prohibitin 2 (PHB1/PHB-1 and PHB2/PHB-2) that is highly conserved amongst eukaryotes and associated with the inner mitochondrial membrane. The mitochondrial prohibitin complex is a macromolecular supercomplex composed of repeating heterodimeric subunits of PHB1 and PHB2. The mitochondrial prohibitin complex plays a role in a number of biological processes, including mitochondrial biogenesis and function, development, replicative senescence, and cell death.","definition_xrefs":["PMID:12237468","PMID:21164222","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial prohibitin complex","synonyms":[{"name":"mitochondrial inner membrane prohibitin complex","type":"exact"}],"termid":"GO:0035632"}


id: GO:0106149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-carbonyl nitrile + NADPH +O2=4-hydroxyindole-3- carbonyl nitrile + NADP+ + H20.","definition_xrefs":["RHEA:57864","GOC:lr","PMID:26352477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"indole-3-carbonyl nitrile 4-hydroxylase activity","secondary_identifiers":["EC:1.14.14.165"],"termid":"GO:0106149"}


id: PBO:0075745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72","termid":"PBO:0075745"}


id: GO:0071627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the fungal-type vacuole membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of fungal-type vacuolar membrane (obsolete GO:0071627)","synonyms":[{"name":"integral to fungal-type vacuolar membrane","type":"narrow"}],"termid":"GO:0071627"}


id: GO:1900427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cellular response to oxidative stress.","definition_xrefs":["GOC:TermGenie","PMID:10348908","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900427)","synonyms":[{"name":"regulation of adaptive response to oxidative stress by regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:1900427"}


id: PBO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 1","termid":"PBO:0051914"}


id: PBO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 42","termid":"PBO:0072356"}


id: _global:input_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","secondary_identifiers":["RO:0002352"],"termid":"_global:input_of"}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: PBO:0067758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 57","termid":"PBO:0067758"}


id: GO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of a myocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (obsolete GO:0003256)","termid":"GO:0003256"}


id: MONDO:0007391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hip deformity in which the femoral neck leans forward resulting in a decrease in the angle between femoral neck and its shaft. It may be congenital often syndromic, acquired, or developmental.","definition_xrefs":["MESH:D060905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxa vara","secondary_identifiers":["EFO:1001298","HP:0002812","OMIM:122750","UMLS:C5551440","MEDGEN:1790477"],"synonyms":[{"name":"coxa vara","type":"exact"},{"name":"coxa vara (disease)","type":"exact"},{"name":"coxa vara, congenital","type":"related"}],"termid":"MONDO:0007391","xrefs":{"Monarch":{"xref_id":"0007391"}}}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_04792","SJAG_01957","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73422,78597,89499],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["EC:2.3.1.51","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004469","Reactome:R-HSA-1482548","Reactome:R-HSA-1482636","Reactome:R-HSA-1482689","Reactome:R-HSA-8849345","MetaCyc:RXN-1623","Reactome:R-HSA-1482539","Reactome:R-HSA-1482667","Reactome:R-HSA-1482598","Reactome:R-HSA-75885","Reactome:R-HSA-1482547","Reactome:R-HSA-1482894","RHEA:19709"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: PBO:0085390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane low glucose sensor, regulates glucose transport; high affinity sensor that contains 12 predicted transmembrane segments and a long C-terminal tail required for induction of hexose transporters; also senses fructose and mannose; SNF3 has a paralog, RGT2, that arose from the whole genome duplication","termid":"PBO:0085390"}


id: MONDO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis (obsolete MONDO:0000199)","termid":"MONDO:0000199","xrefs":{"Monarch":{"xref_id":"0000199"}}}


id: GO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090092"}


id: GO:0018878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane that occur in presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","termid":"GO:0018877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"aerobic beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018878"}


id: MONDO:0033480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia 45","secondary_identifiers":["MEDGEN:1622156","GARD:22353","DOID:0080287","OMIM:617769","Orphanet:589527","UMLS:C4540400"],"synonyms":[{"name":"SCA45","type":"related"},{"name":"spinocerebellar ataxia 45","type":"exact"}],"termid":"MONDO:0033480","xrefs":{"Monarch":{"xref_id":"0033480"}}}


id: PBO:0070137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 51 pseudogene","termid":"PBO:0070137"}


id: GO:1902657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a prospore membrane.","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000087","PMID:24036347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to prospore membrane","secondary_identifiers":["GO:1902658","GO:0072693"],"synonyms":[{"name":"establishment of protein localisation in prospore membrane","type":"related"},{"name":"establishment of protein localisation to prospore membrane","type":"related"},{"name":"establishment of protein localization in prospore membrane","type":"related"},{"name":"establishment of protein localization to prospore membrane","type":"related"},{"name":"protein localisation in prospore membrane","type":"exact"},{"name":"protein localisation to prospore membrane","type":"exact"},{"name":"protein localization in prospore membrane","type":"exact"},{"name":"protein targeting to FSM","type":"related"},{"name":"protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"protein targeting to forespore membrane","type":"related"},{"name":"protein targeting to prospore membrane","type":"related"},{"name":"protein-prospore membrane targeting","type":"related"}],"termid":"GO:1902657"}


id: SO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic island is an integrated mobile genetic element, characterized by size (over 10 Kb). It that has features that suggest a foreign origin. These can include nucleotide distribution (oligonucleotides signature, CG content etc.) that differs from the bulk of the chromosome and/or genes suggesting DNA mobility.","definition_xrefs":["Phigo:at","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_island","secondary_identifiers":["http://en.wikipedia.org/wiki/Genomic_island"],"synonyms":[{"name":"genomic island","type":"exact"}],"termid":"SO:0000772"}


id: MONDO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pearson syndrome is characterized by refractory sideroblastic anemia, vacuolization of bone marrow precursors and exocrine pancreatic dysfunction.","definition_xrefs":["Orphanet:699"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disorder with intestinal involvement (obsolete MONDO:0015188)","termid":"MONDO:0015188"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with hypoparathyroidism (obsolete MONDO:0015895)","termid":"MONDO:0015895"},{"relation_name":"excluded_subClassOf","term_name":"obsolete mitochondrial oxidative phosphorylation disorder due to a large-scale single deletion of mitochondrial DNA (obsolete MONDO:0016792)","termid":"MONDO:0016792"},{"relation_name":"excluded_subClassOf","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pearson syndrome","secondary_identifiers":["UMLS:C0342784","SCTID:237985009","GARD:7343","ICD9:277.87","DOID:0060067","MEDGEN:87459","NCIT:C115326","MedDRA:10062941","icd11.foundation:452521132","OMIM:557000"],"synonyms":[{"name":"Pearson marrow-pancreas syndrome","type":"exact"},{"name":"Pearson's marrow/pancreas syndrome","type":"related"},{"name":"Pearson's syndrome","type":"related"},{"name":"sideroblastic Anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic Anemia with marrow cell vacuolization and exocrine pancreatic dysfunction","type":"related"},{"name":"sideroblastic anaemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"},{"name":"sideroblastic anemia with marrow cell vacuolization and exocrine pancreatic dysfunction (formerly)","type":"related"}],"termid":"MONDO:0010797","xrefs":{"Monarch":{"xref_id":"0010797"}}}


id: PBO:0052250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 19","termid":"PBO:0052250"}


id: GO:0032497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["GOC:add","PMID:15998797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipopolysaccharide","synonyms":[{"name":"detection of LPS","type":"exact"}],"termid":"GO:0032497"}


id: PBO:0042529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5","termid":"PBO:0042529"}


id: MONDO:0014653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ZNF408 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 72","secondary_identifiers":["GARD:16119","ICD10CM:H35.5","DOID:0110395","OMIM:616469","UMLS:C4225315","MEDGEN:895867"],"synonyms":[{"name":"RP72","type":"exact"},{"name":"ZNF408 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 72","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ZNF408","type":"exact"},{"name":"retinitis pigmentosa type 72","type":"exact"}],"termid":"MONDO:0014653","xrefs":{"Monarch":{"xref_id":"0014653"}}}


id: GO:0034005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-(R)-germacrene A + diphosphate.","definition_xrefs":["RHEA:12516","EC:4.2.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"germacrene-A synthase activity","secondary_identifiers":["MetaCyc:RXN-11527","KEGG_REACTION:R07649"],"synonyms":[{"name":"(+)-(10R)-germacrene A synthase activity","type":"related"},{"name":"(+)-germacrene A synthase activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (germacrene-A-forming) activity","type":"related"},{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase [(+)-germacrene-A-forming] activity","type":"related"},{"name":"GAS","type":"related"},{"name":"germacrene A synthase activity","type":"related"}],"termid":"GO:0034005"}


id: GO:0000375
data:
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id: PBO:0038471
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA9 antisense RNA 1","termid":"PBO:0038471"}


id: PBO:0044207
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: MONDO:1012095
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia, non-human animal","termid":"MONDO:1011689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, dog","secondary_identifiers":["OMIA:000430-9615"],"termid":"MONDO:1012095","xrefs":{"Monarch":{"xref_id":"1012095"}}}


id: GO:0010380
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["PMID:17291312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"}


id: MONDO:0024610
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin diseases caused by ARTHROPODS; HELMINTHS; or other parasites.","definition_xrefs":["MESH:D012876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"parasitic skin disorder","secondary_identifiers":["UMLS:C0037280","MEDGEN:20780"],"synonyms":[{"name":"disease, parasitic skin","type":"related"},{"name":"diseases, parasitic skin","type":"related"},{"name":"parasitic skin disease","type":"exact"},{"name":"parasitic skin diseases","type":"related"},{"name":"skin disease, parasitic","type":"related"}],"termid":"MONDO:0024610","xrefs":{"Monarch":{"xref_id":"0024610"}}}


id: MONDO:0013512
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha thalassemia caused by variation in three of the four copies of the alpha hemoglobin genes (e.g., large deletion in HBA1 and HBA2 genes in trans with a variant in either HBA1 or HBA2).","direct_ancestors":[{"relation_name":"is_a","term_name":"digenic alpha thalassemia spectrum","termid":"MONDO:0100563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin H disease","secondary_identifiers":["icd11.foundation:9436211","OMIM:613978","DOID:0110031","MedDRA:10063435","MEDGEN:468531","ICD9:282.49","Orphanet:93616","SCTID:48553001","GARD:16829","UMLS:C3161174","NCIT:C95504"],"synonyms":[{"name":"Alpha-thalassemia intermedia","type":"exact"},{"name":"Alpha-thalassemia, Haemoglobin H type","type":"related"},{"name":"Alpha-thalassemia, Hemoglobin H type","type":"related"},{"name":"HBA1;HBA2 digenic triallelic hemoglobin H disease","type":"exact"},{"name":"HBH","type":"exact"},{"name":"HEMOGLOBIN H disease","type":"related"},{"name":"Haemoglobin H disease, Deletional","type":"related"},{"name":"Haemoglobin H disease, Nondeletional","type":"related"},{"name":"HbH","type":"exact"},{"name":"HbH disease","type":"exact"},{"name":"Hemoglobin H disease, Deletional","type":"related"},{"name":"Hemoglobin H disease, Nondeletional","type":"related"},{"name":"alpha thalassemia, haemoglobin H type","type":"exact"},{"name":"alpha thalassemia, hemoglobin H type","type":"exact"},{"name":"alpha-thalassemia intermedia","type":"exact"},{"name":"haemoglobin H disease, deletional","type":"exact"},{"name":"haemoglobin H disease, deletional and nondeletional","type":"exact"},{"name":"hemoglobin H disease","type":"exact"},{"name":"hemoglobin H disease caused by triallelic variation in HBA1;HBA2","type":"exact"},{"name":"hemoglobin H disease related to triallelic variation in HBA1 and HBA2","type":"exact"},{"name":"hemoglobin H disease, deletional","type":"exact"},{"name":"hemoglobin H disease, deletional and nondeletional","type":"exact"}],"termid":"MONDO:0013512","xrefs":{"Monarch":{"xref_id":"0013512"}}}


id: MOD:00137
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["RESID:AA0128","PubMed:1973541","Unimod:7#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: PR:Q09683
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand break repair protein MRE11A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00172","PRO:DNx","PANTHER:PTHR10139:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.07","secondary_identifiers":["UniProtKB:Q09683"],"synonyms":[{"name":"Spom972h-MRE11A","type":"exact"}],"termid":"PR:Q09683"}


id: PBO:0085817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps THO2/YNL139C","termid":"PBO:0085817"}


id: PBO:0058354
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PBO:0000528
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted)","termid":"PBO:0000528"}


id: PBO:0075052
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-15","termid":"PBO:0075052"}


id: GO:1900036
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"positively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to heat","synonyms":[{"name":"activation of cellular response to heat","type":"related"},{"name":"activation of cellular response to heat stress","type":"exact"},{"name":"positive regulation of cellular response to heat stress","type":"exact"},{"name":"up regulation of cellular response to heat","type":"related"},{"name":"up regulation of cellular response to heat stress","type":"exact"},{"name":"up-regulation of cellular response to heat","type":"related"},{"name":"up-regulation of cellular response to heat stress","type":"exact"},{"name":"upregulation of cellular response to heat","type":"related"},{"name":"upregulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900036"}


id: GO:0050590
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: desacetoxyvindoline + 2-oxoglutarate + O2 = desacetylvindoline + succinate + CO2.","definition_xrefs":["EC:1.14.11.20","MetaCyc:1.14.11.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"desacetoxyvindoline 4-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05857","RHEA:18973"],"synonyms":[{"name":"D17H activity","type":"related"},{"name":"deacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4-beta-hydroxylating) activity","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline-4-hydroxylase activity","type":"related"},{"name":"desacetyoxyvindoline-17-hydroxylase activity","type":"related"}],"termid":"GO:0050590"}


id: PBO:0049450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 4","termid":"PBO:0049450"}


id: PBO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic Rho guanine nucleotide exchange factor","termid":"PBO:0090236"}


id: FYPO:0005621
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id: GO:1904645
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id: PBO:0071307
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 30","termid":"PBO:0071307"}


id: GO:0061993
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in).","definition_xrefs":["GOC:bhm","PMID:19098009","PMID:28645169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcium:proton antiporter complex","synonyms":[{"name":"CAX1 homodimer","type":"narrow"},{"name":"CAX1-CAX3 complex","type":"narrow"},{"name":"CAX3 homodimer","type":"narrow"}],"termid":"GO:0061993"}


id: MONDO:0017358
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete organic aciduria (obsolete MONDO:0017358)","termid":"MONDO:0017358","xrefs":{"Monarch":{"xref_id":"0017358"}}}


id: MONDO:0013275
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hemolytic anemia due to a defect of the glycolytic enzyme glucose 6-phosphate isomerase (GPI) characterized by chronic nonspherocytic hemolytic anemia and, rarely, neurological impairment.","definition_xrefs":["Orphanet:712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005570","MONDO:0037792","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic anemia due to glucophosphate isomerase deficiency","secondary_identifiers":["GARD:16541","MEDGEN:462080","OMIM:613470","UMLS:C3150730"],"synonyms":[{"name":"CNSHA4","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 4, glucose phosphate isomerase deficient","type":"exact"},{"name":"glucosephosphate isomerase deficiency","type":"exact"},{"name":"hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency","type":"exact"}],"termid":"MONDO:0013275","xrefs":{"Monarch":{"xref_id":"0013275"}}}


id: GO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nitric-oxide synthase biosynthetic process (obsolete GO:0051770)","synonyms":[{"name":"activation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"activation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of NO synthase biosynthesis","type":"exact"},{"name":"positive regulation of NO synthase biosynthetic process","type":"exact"},{"name":"positive regulation of NOS biosynthesis","type":"exact"},{"name":"positive regulation of NOS biosynthetic process","type":"exact"},{"name":"positive regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"positive regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"positive regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"stimulation of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"up-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"up-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"upregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"upregulation of nitric-oxide synthase biosynthetic process","type":"exact"}],"termid":"GO:0051770"}


id: PBO:0075605
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: GO:0004897
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ciliary neurotrophic factor (CNTF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor activity","synonyms":[{"name":"CNTF receptor activity","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004897"}


id: MOD:00463
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-hydroxy-L-kynurenine.","definition_xrefs":["Unimod:350#W","OMSSA:58","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-hydroxy-L-kynurenine","synonyms":[{"name":"Trp->Hydroxykynurenin","type":"related"},{"name":"hydroxykynureninw","type":"exact"},{"name":"tryptophan oxidation to hydroxykynurenin","type":"related"}],"termid":"MOD:00463"}


id: GO:0051274
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id: GO:0070568
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id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: GO:0030729
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + ATP + CoA = acetoacetyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["EC:6.2.1.16","RHEA:16117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetoacetate-CoA ligase activity","secondary_identifiers":["MetaCyc:ACETOACETATE--COA-LIGASE-RXN","Reactome:R-HSA-5694494","KEGG_REACTION:R01357"],"synonyms":[{"name":"acetoacetate:CoA ligase (AMP-forming)","type":"related"},{"name":"acetoacetyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0030729"}


id: MONDO:0011906
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bile acid synthesis defect type 1 (BAS defect type 1) is the most common anomaly of bile acid synthesis characterized by variable manifestations of progressive cholestatic liver disease, and fat malabsorption.","definition_xrefs":["Orphanet:79301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 1","secondary_identifiers":["UMLS:C1843116","MESH:C535442","OMIM:607765","GARD:9813","MEDGEN:335883","DOID:0111071"],"synonyms":[{"name":"3-Beta-hydroxy-Delta-5-C27-steroid oxidoreductase deficiency","type":"related"},{"name":"3-alpha beta-hydroxy-delta-5-C27-steroid oxidoreductase, deficiency of","type":"related"},{"name":"3-beta-hydroxy-delta-5-C27-steroid oxidoreductase deficiency type 1","type":"exact"},{"name":"BASD1","type":"exact"},{"name":"CBAS1","type":"exact"},{"name":"HSD3B7 congenital bile acid synthesis defect","type":"exact"},{"name":"bile acid synthesis defect, congenital, 1","type":"related"},{"name":"bile acid synthesis defect, congenital, type 1","type":"exact"},{"name":"congenital bile acid synthesis defect 1","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in HSD3B7","type":"exact"},{"name":"congenital bile acid synthesis defect type 1","type":"exact"},{"name":"congenital bile acid synthesis defect, type 1","type":"related"}],"termid":"MONDO:0011906","xrefs":{"Monarch":{"xref_id":"0011906"}}}


id: MONDO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and autistic features with or without hyperkinetic movements","secondary_identifiers":["OMIM:618760","MEDGEN:1684874","UMLS:C5231491"],"synonyms":[{"name":"NEDHAHM","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND AUTISTIC FEATURES WITH OR WITHOUT HYPERKINETIC MOVEMENTS","type":"related"}],"termid":"MONDO:0032900","xrefs":{"Monarch":{"xref_id":"0032900"}}}


id: PBO:0038487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 3","termid":"PBO:0038487"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: PBO:0076058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 1","termid":"PBO:0076058"}


id: PR:O94377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp17 gene.","definition_xrefs":["UniProtKB:O94377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit f, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.11","synonyms":[{"name":"Spom972h-atp17","type":"exact"}],"termid":"PR:O94377"}


id: MONDO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","secondary_identifiers":["Orphanet:166484"],"termid":"MONDO:0015657","xrefs":{"Monarch":{"xref_id":"0015657"}}}


id: PBO:0083763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein associated with microtubules and SPBs; component of the kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p); involved in spindle checkpoint maintenance; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-U and fission yeast Mis17; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0083763"}


id: GO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"}],"termid":"GO:0002484"}


id: MONDO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","secondary_identifiers":["EFO:0009300","MEDGEN:1646665","UMLS:C4693325","OMIM:617820"],"synonyms":[{"name":"NDHMSR","type":"related"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","type":"exact"}],"termid":"MONDO:0060629","xrefs":{"Monarch":{"xref_id":"0060629"}}}


id: PBO:0077471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191B","termid":"PBO:0077471"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: PBO:0025528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-H ortholog Fta3","termid":"PBO:0025528"}


id: PBO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase (predicted)","termid":"PBO:0001862"}


id: PBO:0049594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 12","termid":"PBO:0049594"}


id: MONDO:0800198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia universalis","secondary_identifiers":["icd11.foundation:69070500","UMLS:C0263505","MEDGEN:120481"],"synonyms":[{"name":"AU","type":"exact"}],"termid":"MONDO:0800198","xrefs":{"Monarch":{"xref_id":"0800198"}}}


id: PBO:0064407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 2","termid":"PBO:0064407"}


id: PBO:0087375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ssh1p-Sss1p-Sbh2p complex component; involved in protein translocation into the endoplasmic reticulum; SBH2 has a paralog, SBH1, that arose from the whole genome duplication","termid":"PBO:0087375"}


id: PBO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 29","termid":"PBO:0070356"}


id: MONDO:0008748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome with pulmonary fibrosis","termid":"MONDO:0016501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 1","secondary_identifiers":["MEDGEN:419514","GARD:18331","NCIT:C150367","DOID:0060539","MESH:C538539","OMIM:203300","UMLS:C2931875"],"synonyms":[{"name":"Delta storage pool disease","type":"related"},{"name":"HPS1","type":"related"},{"name":"HPS1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 1","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 1","type":"exact"},{"name":"albinism with hemorrhagic diathesis and pigmented reticuloendothelial cells","type":"related"}],"termid":"MONDO:0008748","xrefs":{"Monarch":{"xref_id":"0008748"}}}


id: PBO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-13","termid":"PBO:0075002"}


id: PBO:0083512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ERG7/YHR072W","termid":"PBO:0083512"}


id: PBO:0058497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5691","termid":"PBO:0058497"}


id: MONDO:0100306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of peroxisome oxidation.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of defective peroxisome oxidative status","synonyms":[{"name":"disorder of defective peroxisome oxidative status","type":"exact"}],"termid":"MONDO:0100306","xrefs":{"Monarch":{"xref_id":"0100306"}}}


id: PBO:0086331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p); regulates plasma membrane H(+)-ATPase activity; protein abundance increases in response to DNA replication stress; PMP2 has a paralog, PMP1, that arose from the whole genome duplication","termid":"PBO:0086331"}


id: GO:0141218
data:
  {"annotated_genes":["SJAG_04039","SJAG_01075","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89518,79121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[103726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[89519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[79122,114023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[79123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-acyl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-acyl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["RHEA:54172","PMID:35044827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NAD-dependent protein lysine deacylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein lysine deacylase activity","type":"broad"}],"termid":"GO:0141218","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: GO:0071912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Release of neurotransmitter at the synapse that persists for tens to hundreds of milliseconds after action potential invasion.","definition_xrefs":["GOC:dsf","PMID:19477156","PMID:20643933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asynchronous neurotransmitter secretion","termid":"GO:0071912"}


id: FYPO:0004187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein export from the nucleus does not occur during a cellular response to hydroxyurea. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein export from nucleus","termid":"FYPO:0001921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein export from nucleus during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein export from nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"absent protein export from nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea","type":"exact"},{"name":"protein export from nucleus abolished during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004187"}


id: PBO:0074506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5","termid":"PBO:0074506"}


id: PBO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GDP_binding","termid":"PBO:0030535"}


id: MONDO:0016129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic gastroenteritis (EGE) is a rare benign gastrointestinal disease characterized by the presence of abnormal and nonspecific gastro-intestinal (GI) manifestations, associated with an eosinophilic infiltration of the GI tract, which can affect several segments and involve several layers within the GI wall.","definition_xrefs":["Orphanet:2070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"eosinophilic gastrointestinal disease","termid":"MONDO:0018438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"eosinophilic gastroenteritis","secondary_identifiers":["ICD9:558.41","DOID:4031","MedDRA:10017902","GARD:9142","NORD:1097","SCTID:359804008","UMLS:C1262481","NANDO:1200457","NCIT:C35330","MEDGEN:220382"],"synonyms":[{"name":"EGE","type":"exact"},{"name":"eosinophilic enteritis","type":"exact"},{"name":"eosinophilic gastroenteritis","type":"exact"},{"name":"eosinophilic gastroenterocolitis","type":"exact"}],"termid":"MONDO:0016129","xrefs":{"Monarch":{"xref_id":"0016129"}}}


id: SO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_LTR_component","termid":"SO:0000849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_three_prime_LTR_region","synonyms":[{"name":"U5 3' long terminal repeat region","type":"exact"},{"name":"U5 three prime LTR region","type":"exact"}],"termid":"SO:0000432"}


id: GO:0019704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-myristoyl-L-cysteine.","definition_xrefs":["RESID:AA0307"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-cysteine S-myristoylation (obsolete GO:0019704)","synonyms":[{"name":"peptidyl-S-myristoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-myristoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0019704"}


id: PBO:0041081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRK1 pseudogene 2","termid":"PBO:0041081"}


id: FYPO:0004499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: GO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"juvenile hormone secretion","termid":"GO:0045443"}


id: PBO:0048476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 3","termid":"PBO:0048476"}


id: PBO:0064576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres 1","termid":"PBO:0064576"}


id: PBO:0070627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 11","termid":"PBO:0070627"}


id: PBO:0088438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam13/Mug147, tandem fusion","termid":"PBO:0088438"}


id: MONDO:0006470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal lining of the tonsil and tends to metastasize early to the lymph nodes. It predominantly affects middle aged and elderly patients who have a history of alcohol and tobacco use. Patients may present with tonsillar swelling, sore throat, pain radiating to the ipsilateral ear, or a neck mass.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsil carcinoma","termid":"MONDO:0021337"},{"relation_name":"is_a","term_name":"oropharynx squamous cell carcinoma","termid":"MONDO:0044704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"tonsillar squamous cell carcinoma","secondary_identifiers":["EFO:1000597","NCIT:C8183","MEDGEN:79101","DOID:0050920","UMLS:C0280317"],"synonyms":[{"name":"SCC of the tonsil","type":"exact"},{"name":"SCC of tonsil","type":"exact"},{"name":"palatine tonsil squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the tonsil","type":"exact"},{"name":"squamous cell carcinoma of tonsil","type":"exact"},{"name":"tonsil SCC","type":"exact"},{"name":"tonsil squamous cell carcinoma","type":"exact"},{"name":"tonsillar SCC","type":"exact"}],"termid":"MONDO:0006470","xrefs":{"Monarch":{"xref_id":"0006470"}}}


id: GO:0018897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the sulfur atom from dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzothiophene metabolic process","termid":"GO:0018895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dibenzothiophene desulfurization","secondary_identifiers":["MetaCyc:PWY-681","UM-BBD_pathwayID:dbt"],"synonyms":[{"name":"dibenzothiophene desulphurization","type":"exact"}],"termid":"GO:0018897"}


id: GO:0075232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spore movement on or near host (obsolete GO:0075232)","termid":"GO:0075232"}


id: PBO:0060036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 24","termid":"PBO:0060036"}


id: GO:0005246
data:
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id: PBO:0069285
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id: PBO:0058036
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id: MONDO:0017296
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id: MONDO:0001328
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id: MONDO:0002751
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id: MONDO:0009107
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id: MONDO:0958353
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id: MONDO:0017943
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id: SO:0001370
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id: GO:0097708
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vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:30726171":null,"PMID:32109380":null},"termid":"GO:0097708","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0000938":null,"GO:0005768":null,"GO:0005769":null,"GO:0005770":null,"GO:0005771":null,"GO:0005798":null,"GO:0010008":null,"GO:0010009":null,"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030133":null,"GO:0030134":null,"GO:0030136":null,"GO:0030137":null,"GO:0030139":null,"GO:0030140":null,"GO:0030659":null,"GO:0030663":null,"GO:0030665":null,"GO:0031410":null,"GO:0031901":null,"GO:0031902":null,"GO:0031906":null,"GO:0032585":null,"GO:0033263":null,"GO:0033565":null,"GO:0034044":null,"GO:0034424":null,"GO:0035658":null,"GO:0055037":null,"GO:0070382":null,"GO:0097422":null,"GO:0097708":null,"GO:1990071":null}}


id: PBO:0087065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L31B; associates with karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality; homologous to mammalian ribosomal protein L31, no bacterial homolog; RPL31B has a paralog, RPL31A, that arose from the whole genome duplication","termid":"PBO:0087065"}


id: PR:O74172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2501 gene.","definition_xrefs":["UniProtKB:O74172","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.15","synonyms":[{"name":"S31-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2501","type":"exact"}],"termid":"PR:O74172"}


id: GO:1902231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:TermGenie","GOC:BHF","PMID:15314165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"}],"termid":"GO:1902231"}


id: MONDO:1011654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial digital syndrome, non-human animal","secondary_identifiers":["OMIA:000360"],"termid":"MONDO:1011654","xrefs":{"Monarch":{"xref_id":"1011654"}}}


id: MONDO:0958199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Lafora disease in which the cause of the disease is a variation in the EPM2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lafora disease","termid":"MONDO:0009697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"myoclonic epilepsy of Lafora 1","secondary_identifiers":["OMIM:254780","UMLS:C5848203","MEDGEN:1844054"],"termid":"MONDO:0958199","xrefs":{"Monarch":{"xref_id":"0958199"}}}


id: GO:0018639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: toluene + 1/2 O2 = benzyl alcohol, and xylene + 1/2 O2 = methylbenzyl alcohol.","definition_xrefs":["UM-BBD_enzymeID:e0172"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene monooxygenase activity (obsolete GO:0018639)","termid":"GO:0018639"}


id: PBO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.19","termid":"PBO:0003979"}


id: GO:0021660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 3. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 formation","termid":"GO:0021660"}


id: GO:0042808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics.","definition_xrefs":["GOC:jl","PMID:10721722"],"gene_count":0,"genotype_count":0,"name":"obsolete neuronal Cdc2-like kinase binding (obsolete GO:0042808)","synonyms":[{"name":"neuronal Cdc2-like kinase binding","type":"exact"}],"termid":"GO:0042808"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: MONDO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare genetic multisystemic disorder characterized by pituitary dysfunction, ataxia, peripheral neuropathy, spastic paraplegia, and chorioretinal dystrophy.","definition_xrefs":["Orphanet:2377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Laurence-Moon syndrome","secondary_identifiers":["MESH:D007849","MEDGEN:44078","UMLS:C0023138","MedDRA:10056710","NCIT:C34760","DOID:1930","OMIM:245800","icd11.foundation:458834940","NORD:1932","GARD:12635","SCTID:232059000","SCTID:5619004","ICD9:253.4"],"synonyms":[{"name":"LMS","type":"exact"},{"name":"LNMS","type":"related"},{"name":"Laurence-MOON syndrome","type":"related"},{"name":"Laurence-Moon syndrome","type":"exact"},{"name":"Laurence-Moon-Biedl syndrome","type":"related"}],"termid":"MONDO:0009514","xrefs":{"Monarch":{"xref_id":"0009514"}}}


id: PBO:0053769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1014","termid":"PBO:0053769"}


id: PBO:0110029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 1","termid":"PBO:0110029"}


id: GO:0031204
data:
  {"annotated_genes":["SJAG_00959","SJAG_03396","SJAG_00064","SJAG_02354","SJAG_02588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74925,82032,96838,97555,107872],"is_not":false,"summary":null,"term":"GO:0031204"}]},"cv_name":"biological_process","definition":"The process in which a protein translocates through the ER membrane posttranslationally.","definition_xrefs":["PMID:8707814","PMID:12518317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"posttranslational protein membrane targeting, translocation","type":"exact"},{"name":"posttranslational protein targeting to membrane, translocation","type":"exact"},{"name":"protein translocation during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031204","terms_by_termid":{"GO:0031204":null}}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21597:SF0","OMA:SCHPO00263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: GO:0070211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone deacetylase complex that is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains Snt2p, Ecm5p and Rpd3p.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"Snt2C complex","termid":"GO:0070211"}


id: PBO:0041510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 132","termid":"PBO:0041510"}


id: FYPO:0004535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a smaller volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small spore","termid":"FYPO:0000307"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable small spore with abnormal shape","synonyms":[{"name":"inviable small abnormally shaped spore","type":"exact"},{"name":"inviable small spore with abnormal morphology","type":"exact"},{"name":"inviable spore with decreased size and abnormal shape","type":"related"},{"name":"inviable spore with decreased spore size and abnormal shape","type":"related"},{"name":"inviable spore with decreased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with decreased volume and abnormal shape","type":"exact"},{"name":"lethal; small spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, small misshapen spores","type":"related"},{"name":"spore germination abolished, small spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and decreased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and decreased cell volume","type":"exact"}],"termid":"FYPO:0004535"}


id: FYPO:0005565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal when the cell undergoes transition from G0 phase to G1.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule bundle during G0 to G1 transition","synonyms":[{"name":"abnormal MT bundle during G0 to G1 transition","type":"exact"},{"name":"abnormal microtubule array during G0 to G1 transition","type":"related"},{"name":"abnormal microtubule bundle during cell cycle re-entry","type":"exact"},{"name":"abnormal microtubule bundle during cell quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during exit from cell quiescence","type":"exact"},{"name":"abnormal microtubule bundle during quiescence to G1 transition","type":"exact"},{"name":"abnormal microtubule bundle during recovery from quiescence","type":"exact"},{"name":"abnormal microtubule bundle physical object quality during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005565"}


id: GO:0000398
data:
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id: GO:0047233
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id: GO:0102438
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id: PBO:0002326
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id: GO:0031322
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id: PBO:0088908
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id: MONDO:0010474
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id: PBO:0070034
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1331, pseudogene","termid":"PBO:0070034"}


id: PBO:0059696
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 4","termid":"PBO:0059696"}


id: MONDO:1010937
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porcine lymphoma","termid":"MONDO:0700198"},{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"},{"relation_name":"is_a","term_name":"cancer, pig","termid":"MONDO:1012572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, pig","secondary_identifiers":["OMIA:000615-9823"],"termid":"MONDO:1010937","xrefs":{"Monarch":{"xref_id":"1010937"}}}


id: SO:0000729
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id: MONDO:0008222
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id: PBO:0065848
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11B antisense RNA 1","termid":"PBO:0065848"}


id: MONDO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the ethmoid sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"paranasal sinus squamous cell carcinoma","termid":"MONDO:0044705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus squamous cell carcinoma","secondary_identifiers":["SCTID:707359008","NCIT:C6065","UMLS:C1333477","MEDGEN:272596","DOID:2763"],"synonyms":[{"name":"epidermoid carcinoma of ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of ethmoidal sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoid sinus","type":"exact"},{"name":"epidermoid carcinoma of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoid sinus squamous cell carcinoma","type":"exact"},{"name":"ethmoidal sinus epidermoid carcinoma","type":"exact"},{"name":"ethmoidal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of ethmoidal sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoid sinus","type":"exact"},{"name":"squamous cell carcinoma of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0002416","xrefs":{"Monarch":{"xref_id":"0002416"}}}


id: PBO:0066828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 127","termid":"PBO:0066828"}


id: PBO:0011104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1 (predicted)","termid":"PBO:0011104"}


id: GO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the movement of cytochrome c from the mitochondrial intermembrane space into the cytosol, which is part of the apoptotic signaling pathway and leads to caspase activation.","definition_xrefs":["PMID:9560217","ISBN:0721639976","PMID:12925707","GOC:mah","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic mitochondrial changes","termid":"GO:0008637"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}


id: MONDO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hypoparathyroidism.","gene_count":0,"genotype_count":0,"name":"obsolete rare hypoparathyroidism (obsolete MONDO:0015896)","secondary_identifiers":["Orphanet:181405"],"synonyms":[{"name":"rare hypoparathyroidism","type":"exact"}],"termid":"MONDO:0015896","xrefs":{"Monarch":{"xref_id":"0015896"}}}


id: GO:0010419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the side chains of pectic rhamnogalacturonan II. A number of structurally distinct di- and oligosaccharides can be attached to the C-3 and C-2 of the backbone, respectively.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan II side chain metabolic process","synonyms":[{"name":"rhamnogalacturonan II side chain metabolism","type":"exact"}],"termid":"GO:0010419"}


id: PBO:0053650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 702","termid":"PBO:0053650"}


id: PBO:0075013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-24","termid":"PBO:0075013"}


id: MONDO:0035441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare isolated constitutional thrombocytopenia characterized by neonatal onset of small-platelet thrombocytopenia with significantly increased bleeding tendency. Bleeding symptoms include petechial rash, mucosal bleeding, and heavy menstrual bleeding. Growth and development are normal, and there is no increased susceptibility to infections.","definition_xrefs":["Orphanet:566192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital autosomal recessive small-platelet thrombocytopenia","secondary_identifiers":["ICD10CM:D69.4","UMLS:C5680129","MEDGEN:1802913","GARD:22274"],"synonyms":[{"name":"CARST","type":"exact"}],"termid":"MONDO:0035441","xrefs":{"Monarch":{"xref_id":"0035441"}}}


id: GO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.","definition_xrefs":["VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint","secondary_identifiers":["VZ:881"],"synonyms":[{"name":"G0/G1 host cell cycle checkpoint dysregulation by virus","type":"narrow"},{"name":"modulation by virus of host G0/G1 transition checkpoint","type":"narrow"},{"name":"perturbation by virus of host G0/G1 transition checkpoint","type":"narrow"}],"termid":"GO:0039646"}


id: PBO:0044959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 1 (pseudogene)","termid":"PBO:0044959"}


id: SO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 28S_rRNA, which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_28S_gene","synonyms":[{"name":"28S rRNA gene","type":"exact"},{"name":"28S_rRNA_gene","type":"exact"}],"termid":"SO:0002239"}


id: FYPO:0002568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nuclear periphery","synonyms":[{"name":"abolished protein localisation to nuclear periphery","type":"exact"},{"name":"abolished protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear periphery during vegetative growth","type":"exact"},{"name":"protein localization to nuclear periphery abolished","type":"exact"}],"termid":"FYPO:0002568"}


id: PBO:0063623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFKP divergent transcript","termid":"PBO:0063623"}


id: PBO:0055980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 3","termid":"PBO:0055980"}


id: MONDO:0006595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jaundice in perinates due to cellular damage of liver.","definition_xrefs":["EFO:1000750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"perinatal jaundice due to hepatocellular damage","secondary_identifiers":["DOID:11452","SCTID:10877007","UMLS:C0158976","ICD9:774.4","MEDGEN:510683"],"termid":"MONDO:0006595","xrefs":{"Monarch":{"xref_id":"0006595"}}}


id: PBO:0080335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 99 pseudogene","termid":"PBO:0080335"}


id: MONDO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete megalocornea (obsolete MONDO:0000737)","termid":"MONDO:0000737","xrefs":{"Monarch":{"xref_id":"0000737"}}}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: PBO:0040834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 8","termid":"PBO:0040834"}


id: PBO:0083609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a protein; completely overlaps the uncharacterized gene YKR075C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083609"}


id: MONDO:0850271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia occurring in children with Down syndrome and that has material basis in mutation in the GATA1 gene.","definition_xrefs":["DOID:0080798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"myeloid leukemia associated with down syndrome","secondary_identifiers":["MEDGEN:416725","NCIT:C43223","UMLS:C2825149"],"termid":"MONDO:0850271","xrefs":{"Monarch":{"xref_id":"0850271"}}}


id: PBO:0029975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_mitotic_G2/M_transition","termid":"PBO:0029975"}


id: PBO:0072662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 3 pseudogene 1","termid":"PBO:0072662"}


id: GO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa.","definition_xrefs":["PMID:30990821","ISBN:9780878933846","PMID:28073824","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogenesis","secondary_identifiers":["Wikipedia:Spermatogenesis"],"synonyms":[{"name":"generation of spermatozoa","type":"exact"}],"termid":"GO:0007283"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: RO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of determined by","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_influences","termid":"RO:0002566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determines","termid":"RO:0002508"}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["UMLS:C1516413","MEDGEN:308945"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: MONDO:0009261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 2 is a clinically variable, infancy or childhood-onset form of GM1 gangliosidosis characterized by normal early development and psychomotor regression between seven months and three years of age.","definition_xrefs":["Orphanet:79256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005328","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"GM1 gangliosidosis type 2","secondary_identifiers":["NANDO:1200068","UMLS:C0268272","DOID:0080501","NANDO:2201197","OMIM:230600","MEDGEN:120625","SCTID:18756002","icd11.foundation:1132250614","GARD:10126"],"synonyms":[{"name":"GM1-gangliosidosis, type 2","type":"related"},{"name":"GM1-gangliosidosis, type II","type":"related"},{"name":"gangliosidosis generalised GM1 juvenile type","type":"related"},{"name":"gangliosidosis generalised GM1 type 2","type":"related"},{"name":"gangliosidosis generalized GM1 juvenile type","type":"related"},{"name":"gangliosidosis generalized GM1 type 2","type":"related"},{"name":"gangliosidosis, generalised GM1, juvenile type","type":"related"},{"name":"gangliosidosis, generalised GM1, late-infantile type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 2","type":"related"},{"name":"gangliosidosis, generalized GM1, juvenile type","type":"related"},{"name":"gangliosidosis, generalized GM1, late-infantile type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 2","type":"related"},{"name":"juvenile GM1 gangliosidosis","type":"exact"},{"name":"late-infantile GM1 gangliosidosis","type":"exact"}],"termid":"MONDO:0009261","xrefs":{"Monarch":{"xref_id":"0009261"}}}


id: PR:P36580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fructose-bisphosphate aldolase class 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.07","secondary_identifiers":["UniProtKB:P36580"],"synonyms":[{"name":"FBP aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FBPA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fbaA","type":"exact"},{"name":"fructose-1,6-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36580"}


id: GO:0033694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.5.7.-"],"termid":"GO:0033694"}


id: GO:0070287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ferritin, and delivering ferritin into the cell via endocytosis.","definition_xrefs":["PMID:17459943","GOC:bf","PMID:19154717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"ferritin receptor activity","synonyms":[{"name":"ferritin complex receptor activity","type":"exact"}],"termid":"GO:0070287"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: GO:0061459
data:
  {"annotated_genes":["SJAG_03400","SJAG_04637","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80919,96860,99877],"is_not":false,"summary":null,"term":"GO:0061459"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-arginine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0102022","GO:0015598","MetaCyc:RXN66-448","GO:0015181","GO:0005288"],"synonyms":[{"name":"ATP-dependent L-arginine transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled L-arginine transmembrane transporter activity","type":"narrow"},{"name":"L-arginine transporter activity","type":"exact"},{"name":"L-arginine-importing ATPase activity","type":"narrow"},{"name":"arginine permease activity","type":"broad"},{"name":"arginine porter activity","type":"narrow"},{"name":"arginine transmembrane transporter activity","type":"exact"},{"name":"arginine-importing ATPase activity","type":"narrow"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0061459","terms_by_termid":{"GO:0061459":null}}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: SO:0001231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which guanine is methylated at the 7- position.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_methylguanine","synonyms":[{"name":"7-methylguanine","type":"exact"},{"name":"seven methylguanine","type":"exact"}],"termid":"SO:0001231"}


id: MONDO:0013020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, susceptibility to","termid":"MONDO:0100049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 5, susceptibility to","secondary_identifiers":["MEDGEN:440562","OMIM:612851","UMLS:C2748508"],"synonyms":[{"name":"NRCLP5","type":"exact"},{"name":"narcolepsy 5","type":"related"},{"name":"narcolepsy 5, susceptibility to","type":"exact"}],"termid":"MONDO:0013020","xrefs":{"Monarch":{"xref_id":"0013020"}}}


id: GO:0098899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the spine apparatus membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"spine apparatus lumen","termid":"GO:0098899"}


id: PBO:0041255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 198","termid":"PBO:0041255"}


id: GO:0019821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P3 peroxisomes are formed by fusion of P1 and P2 peroxisomes, and are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"P3 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019821"}


id: PBO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B9","termid":"PBO:0061331"}


id: PBO:0034287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sequentially_adjacent_to","termid":"PBO:0034287"}


id: PBO:0068706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 87, pseudogene","termid":"PBO:0068706"}


id: GO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of protein tyrosine to L-2',4',5'-topaquinone, characteristic of the active site of copper amine oxidases.","definition_xrefs":["RESID:AA0147"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-2',4',5'-topaquinone biosynthetic process from peptidyl-tyrosine (obsolete GO:0018068)","synonyms":[{"name":"peptidyl-L-2',4',5'-topaquinone anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-L-2',4',5'-topaquinone synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018068"}


id: GO:1901123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bacitracin A.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00179","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"bacitracin A metabolic process","termid":"GO:1901122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A catabolic process","synonyms":[{"name":"bacitracin A breakdown","type":"exact"},{"name":"bacitracin A catabolism","type":"exact"},{"name":"bacitracin A degradation","type":"exact"}],"termid":"GO:1901123"}


id: MONDO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant embryonal neoplasm characterized by the presence of small cells which resemble the cells of classic medulloblastoma and a minor population of melanin-forming neuroepithelial cells. It usually has an unfavorable clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic medulloblastoma","secondary_identifiers":["DOID:3868","MEDGEN:224818","UMLS:C1275668","NCIT:C9497","ONCOTREE:MMBL"],"synonyms":[{"name":"MMBL","type":"related"},{"name":"medulloblastoma with melanotic differentiation","type":"exact"},{"name":"medulloblastoma, melanotic","type":"exact"},{"name":"medulloblastoma, melanotic (morphologic abnormality)","type":"exact"},{"name":"melanocytic medulloblastoma","type":"exact"},{"name":"melanotic medulloblastoma","type":"exact"}],"termid":"MONDO:0002796","xrefs":{"Monarch":{"xref_id":"0002796"}}}


id: PBO:0068097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 404","termid":"PBO:0068097"}


id: PBO:0056909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC inducible lncRNA inactivating p53","termid":"PBO:0056909"}


id: PBO:0041214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 2","termid":"PBO:0041214"}


id: PBO:0028315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_nitrogen_starvation","termid":"PBO:0028315"}


id: GO:1905677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["ISBN:9781405196833","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune effector response","termid":"GO:1905677"}


id: GO:0051683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the Golgi to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of Golgi localization","synonyms":[{"name":"establishment of Golgi apparatus localization","type":"exact"},{"name":"establishment of Golgi body localization","type":"exact"},{"name":"establishment of Golgi localisation","type":"exact"}],"termid":"GO:0051683"}


id: GO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal movement.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal movement","termid":"GO:0010119"}


id: MONDO:0971170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 3","secondary_identifiers":["MEDGEN:1861605","OMIM:301120","UMLS:C5935569"],"termid":"MONDO:0971170","xrefs":{"Monarch":{"xref_id":"0971170"}}}


id: PR:O42998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HEAT repeat-containing protein 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof6 interactor protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.08","secondary_identifiers":["UniProtKB:O42998"],"synonyms":[{"name":"Spom972h-HEATR5B","type":"exact"}],"termid":"PR:O42998"}


id: PATO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a radioactive substance by virtue of its transformation (disintegration) rate.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity (of a radionuclide)","synonyms":[{"name":"radioactivity","type":"exact"}],"termid":"PATO:0001740"}


id: GO:1901294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of DNA binding that results in negative regulation of a SREBP signaling pathway.","definition_xrefs":["PMID:22017871","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by negative regulation of DNA binding (obsolete GO:1901294)","synonyms":[{"name":"inhibition of SREBP-dependent transcription by blocking DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by negative regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signalling pathway by negative regulation of DNA binding","type":"exact"}],"termid":"GO:1901294"}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: MONDO:0010975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia 2 (obsolete MONDO:0010975)","termid":"MONDO:0010975","xrefs":{"Monarch":{"xref_id":"0010975"}}}


id: PBO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae POL2","termid":"PBO:0018028"}


id: PR:Q9UUF3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.03c gene.","definition_xrefs":["UniProtKB:Q9UUF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase C17A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.03c","synonyms":[{"name":"Spom972h-SPBC17A3.03c","type":"exact"}],"termid":"PR:Q9UUF3"}


id: PR:O74962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pantothenate kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03694","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.01c","secondary_identifiers":["UniProtKB:O74962"],"synonyms":[{"name":"Spom972h-PANK3","type":"exact"},{"name":"pantothenic acid kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74962"}


id: GO:0008058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the ocellus.","direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigment granule organization","synonyms":[{"name":"ocellus pigment granule organisation","type":"exact"},{"name":"ocellus pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008058"}


id: MONDO:0037747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A injury that involves the vertebral column.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal injury","secondary_identifiers":["MESH:D013124","SCTID:262521009"],"synonyms":[{"name":"injury of vertebral column","type":"exact"},{"name":"vertebral column injury","type":"exact"}],"termid":"MONDO:0037747","xrefs":{"Monarch":{"xref_id":"0037747"}}}


id: PBO:0110357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 1","termid":"PBO:0110357"}


id: PBO:0003758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 1 (predicted)","termid":"PBO:0003758"}


id: PBO:0050166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 22","termid":"PBO:0050166"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:1708436"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0119987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 3","termid":"PBO:0119987"}


id: PBO:0027376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_and_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027376"}


id: MOD:00492
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of glycylglycine, the two glycine residues left after tryptic digestion of ubiquitin.","definition_xrefs":["OMSSA:52","Unimod:121#K","PubMed:12612601","PubMed:12872131","RESID:AA0125#var","PubMed:11125103"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitination signature dipeptidyl lysine","synonyms":[{"name":"GlyGly","type":"related"},{"name":"N6-(glycylglycyl)lysine","type":"exact"},{"name":"N6-glycylglycyl-L-lysine","type":"exact"},{"name":"glyglyk","type":"exact"},{"name":"ubiquitinylation residue","type":"related"}],"termid":"MOD:00492"}


id: PBO:0077549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 2","termid":"PBO:0077549"}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: PBO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1 (predicted)","termid":"PBO:0032766"}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: GO:0097613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a dinoflagellate cell above the cingulum; also referred to as the anterior portion of a dinoflagellate cell. It is separated from the hypocone by the cingulum.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate epicone","synonyms":[{"name":"epicone","type":"broad"},{"name":"episome","type":"related"},{"name":"epitheca","type":"related"}],"termid":"GO:0097613"}


id: PBO:0066592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member G","termid":"PBO:0066592"}


id: PBO:0091972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf18","termid":"PBO:0091972"}


id: PBO:0066057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 2","termid":"PBO:0066057"}


id: SO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that is bounded by 5' and 3' splice sites.","definition_xrefs":["PMID:10373547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_exon","synonyms":[{"name":"interior exon","type":"exact"}],"termid":"SO:0000201"}


id: PR:O13780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tco1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.02c","synonyms":[{"name":"Spom972h-tco1","type":"exact"}],"termid":"PR:O13780"}


id: PATO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001181 absolute response (obsolete PATO:0001181)","termid":"PATO:0001181"}


id: MONDO:0009962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the NPHP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"Senior-Loken syndrome 1","secondary_identifiers":["OMIM:266900","MEDGEN:1639722","UMLS:C4551559","ICD9:759.89","SCTID:236531005"],"synonyms":[{"name":"Loken-Senior syndrome","type":"related"},{"name":"NPHP1 Senior-Loken syndrome","type":"exact"},{"name":"SENIOR-Loken syndrome 1","type":"related"},{"name":"SLSN1","type":"related"},{"name":"Senior-Loken syndrome","type":"related"},{"name":"Senior-Loken syndrome 1","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in NPHP1","type":"exact"},{"name":"Senior-Loken syndrome type 1","type":"exact"},{"name":"juvenile nephronophthisis with Leber amaurosis","type":"related"},{"name":"renal dysplasia and retinal aplasia","type":"related"},{"name":"renal-retinal syndrome","type":"related"},{"name":"senior-loken syndrome-1","type":"exact"}],"termid":"MONDO:0009962","xrefs":{"Monarch":{"xref_id":"0009962"}}}


id: GO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with incidental electromagnetic radiation, particularly visible light, and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled photoreceptor activity","secondary_identifiers":["GO:0004975"],"synonyms":[{"name":"G protein coupled photoreceptor activity","type":"exact"},{"name":"G-protein coupled photoreceptor activity","type":"exact"},{"name":"photoreceptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008020"}


id: PBO:0059011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase like 1","termid":"PBO:0059011"}


id: FYPO:0000454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, and some cells are longer and other cells smaller than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long and short cells (obsolete FYPO:0000454)","synonyms":[{"name":"inviable mixed population including long and short vegetative cells","type":"exact"}],"termid":"FYPO:0000454"}


id: PBO:0074805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13J","termid":"PBO:0074805"}


id: GO:2001188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001188"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: PBO:0067155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 205, pseudogene","termid":"PBO:0067155"}


id: MONDO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the anal canal or anal margin. Representative examples of non-neoplastic disorders include hemorrhoids and anal ulcer. Representative examples of neoplastic disorders include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:C26695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal disorder","termid":"MONDO:0001593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus disorder","secondary_identifiers":["MESH:D001004","DOID:3128","SCTID:32110003","MEDGEN:359","UMLS:C0003462","EFO:0009660"],"synonyms":[{"name":"Ulcer of anus","type":"related"},{"name":"anal disease","type":"exact"},{"name":"anal disorder","type":"exact"},{"name":"anal fissure","type":"related"},{"name":"anal fissure and fistula","type":"related"},{"name":"anal ulcer","type":"related"},{"name":"anus disease","type":"exact"},{"name":"anus disease or disorder","type":"exact"},{"name":"disease of anus","type":"exact"},{"name":"disease or disorder of anus","type":"exact"},{"name":"disorder of anal region","type":"exact"},{"name":"disorder of anus","type":"exact"},{"name":"fissure in ano","type":"related"},{"name":"nontraumatic tear of anus","type":"related"},{"name":"solitary anal ulcer","type":"related"}],"termid":"MONDO:0002519","xrefs":{"Monarch":{"xref_id":"0002519"}}}


id: MONDO:0044796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nevus characterized by the presence of spindle-shaped melanocytes.","definition_xrefs":["NCIT:C66758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"},{"relation_name":"is_a","term_name":"spitz nevus","termid":"MONDO:0044793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"spindle cell nevus","secondary_identifiers":["SCTID:253038006","MEDGEN:60220","UMLS:C0206738"],"synonyms":[{"name":"spindle cell nevus","type":"exact"}],"termid":"MONDO:0044796","xrefs":{"Monarch":{"xref_id":"0044796"}}}


id: PBO:0065682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase","termid":"PBO:0065682"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65401],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["RHEA:10792","EC:4.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:AIRCARBOXY-RXN","Reactome:R-HSA-73806","KEGG_REACTION:R04209"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: GO:1901997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of indoleacetic acid biosynthetic process via tryptophan.","definition_xrefs":["GOC:TermGenie","PMID:23377040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of auxin metabolic process","termid":"GO:0090356"},{"relation_name":"is_a","term_name":"regulation of indoleacetic acid biosynthetic process via tryptophan","termid":"GO:1901996"},{"relation_name":"negatively_regulates","term_name":"indoleacetic acid biosynthetic process via tryptophan","termid":"GO:0009848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of indoleacetic acid biosynthetic process via tryptophan","synonyms":[{"name":"down regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"down-regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"downregulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"inhibition of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid biosynthetic process via tryptophan","type":"narrow"},{"name":"inhibition of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"negative regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:1901997"}


id: PBO:0055430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2860","termid":"PBO:0055430"}


id: PBO:0047068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 1","termid":"PBO:0047068"}


id: PBO:0062448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 115 pseudogene","termid":"PBO:0062448"}


id: PBO:0039119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 2","termid":"PBO:0039119"}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: GO:0018390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methyl esterification of peptidyl-glutamic acid or peptidyl-glutamine to form the derivative glutamic acid 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamic acid 5-methyl ester biosynthetic process from peptidyl-glutamic acid or peptidyl-glutamine (obsolete GO:0018390)","synonyms":[{"name":"peptidyl-L-glutamic acid 5-methyl ester anabolism from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester formation from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamic acid 5-methyl ester synthesis from peptidyl-glutamic acid or peptidyl-glutamine","type":"exact"}],"termid":"GO:0018390"}


id: GO:0008015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["ISBN:0192800825","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood circulation","secondary_identifiers":["GO:0070261"],"synonyms":[{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0008015"}


id: GO:0038030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a Wnt protein binding to a frizzled family receptor on the surface of a target cell, where the signal is passed on via the MAPKKK cascade.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:17720811","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via MAPK cascade (obsolete GO:0038030)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via MAPK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPK signaling","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via MAPK cascade","type":"exact"}],"termid":"GO:0038030"}


id: MONDO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 3B","secondary_identifiers":["ICD9:425.4","MEDGEN:777148","UMLS:C3668940","OMIM:302045","DOID:0110461","GARD:15287","DOID:0060561","DOID:0081164","MESH:C580047","SCTID:702424003"],"synonyms":[{"name":"CMD3B","type":"exact"},{"name":"DMD dilated cardiomyopathy","type":"exact"},{"name":"DMD-related dilated cardiomyopathy","type":"related"},{"name":"X-linked dilated cardiomyopathy","type":"related"},{"name":"cardiomyopathy, dilated, 3B","type":"related"},{"name":"cardiomyopathy, dilated, X-linked","type":"related"},{"name":"cardiomyopathy, dilated, type 3B","type":"exact"},{"name":"dilated cardiomyopathy 3B","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in DMD","type":"exact"},{"name":"dilated cardiomyopathy type 3B","type":"exact"}],"termid":"MONDO:0010542","xrefs":{"Monarch":{"xref_id":"0010542"}}}


id: GO:0033081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation in thymus","synonyms":[{"name":"regulation of T cell development in thymus","type":"related"},{"name":"regulation of thymic T cell differentiation","type":"exact"},{"name":"regulation of thymocyte cell differentiation","type":"exact"},{"name":"regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033081"}


id: PATO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000086 absolute sensitivity (obsolete PATO:0000086)","termid":"PATO:0000086"}


id: PBO:0086909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; positive regulation by Lys14p suggests that lysine may be the primary substrate; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; RTC2 has a paralog, YPQ1, that arose from the whole genome duplication","termid":"PBO:0086909"}


id: MONDO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","secondary_identifiers":["OMIMPS:614742"],"termid":"MONDO:0000148","xrefs":{"Monarch":{"xref_id":"0000148"}}}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: PBO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease","termid":"PBO:0001211"}


id: MONDO:0024522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary cutaneous amyloidosis in which the cause of the disease is a mutation in the OSMR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary localized cutaneous amyloidosis","termid":"MONDO:0007101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis, primary localized cutaneous, 1","secondary_identifiers":["OMIM:105250","UMLS:C4551501","GARD:18637","MEDGEN:1639046","DOID:0080930"],"synonyms":[{"name":"OSMR primary cutaneous amyloidosis","type":"exact"},{"name":"PCA","type":"related"},{"name":"PLCA1","type":"exact"},{"name":"amyloidosis 9","type":"exact"},{"name":"amyloidosis, familial cutaneous lichen","type":"related"},{"name":"amyloidosis, primary cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localised cutaneous, type 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, type 1","type":"exact"},{"name":"lichen amyloidosis, familial","type":"related"},{"name":"primary cutaneous amyloidosis caused by mutation in OSMR","type":"exact"}],"termid":"MONDO:0024522","xrefs":{"Monarch":{"xref_id":"0024522"}}}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: PBO:0089800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1","termid":"PBO:0089800"}


id: PBO:0062670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 1 pseudogene","termid":"PBO:0062670"}


id: GO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast-type ferredoxin (obsolete GO:0009494)","synonyms":[{"name":"chloroplast-type ferredoxin","type":"exact"}],"termid":"GO:0009494"}


id: MONDO:0006254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from epithelium which has undergone intestinal metaplasia. Representative examples include gastric, gallbladder, and ampulla of Vater intestinal type adenocarcinomas.","definition_xrefs":["NCIT:C4126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intestinal type adenocarcinoma","secondary_identifiers":["EFO:1000304","ICDO:8144/3","UMLS:C0334279","MEDGEN:87206"],"synonyms":[{"name":"intestinal type carcinoma","type":"exact"},{"name":"intestinal-type adenocarcinoma","type":"exact"}],"termid":"MONDO:0006254","xrefs":{"Monarch":{"xref_id":"0006254"}}}


id: PBO:0066755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 53","termid":"PBO:0066755"}


id: GO:0048282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can only produce a predetermined number of floral meristems.","definition_xrefs":["GOC:jid","PMID:9553044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflorescence morphogenesis","termid":"GO:0048281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determinate inflorescence morphogenesis","termid":"GO:0048282"}


id: PBO:0047709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 3","termid":"PBO:0047709"}


id: MONDO:0054724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 20","secondary_identifiers":["UMLS:C4539824","GARD:18404","MEDGEN:1621256","DOID:0070166","OMIM:617593"],"synonyms":[{"name":"SPGF20","type":"related"},{"name":"spermatogenic failure 20","type":"exact"}],"termid":"MONDO:0054724","xrefs":{"Monarch":{"xref_id":"0054724"}}}


id: GO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.","definition_xrefs":["GOC:bf","GOC:fj","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pore formation in membrane of another organism","synonyms":[{"name":"pore complex assembly in other organism","type":"exact"},{"name":"pore complex biogenesis in other organism","type":"exact"},{"name":"pore formation in membrane of other organism","type":"exact"},{"name":"pore formation in other organism","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0035915"}


id: PR:O13698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malonyl-CoA-acyl carrier protein transacylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01650","PANTHER:PTHR10982:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl CoA-acyl carrier protein transacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.05c","secondary_identifiers":["UniProtKB:O13698"],"synonyms":[{"name":"MCT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MCAT","type":"exact"},{"name":"malonyl-CoA:ACP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13698"}


id: GO:0016710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + NADPH + H+ + O2 = 4-hydroxycinnamate + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate 4-monooxygenase activity","secondary_identifiers":["MetaCyc:TRANS-CINNAMATE-4-MONOOXYGENASE-RXN","RHEA:10608"],"synonyms":[{"name":"CA4H activity","type":"narrow"},{"name":"cinnamate 4-hydroxylase activity","type":"related"},{"name":"cinnamate 4-monooxygenase activity","type":"related"},{"name":"cinnamate hydroxylase activity","type":"related"},{"name":"cinnamic 4-hydroxylase activity","type":"related"},{"name":"cinnamic acid 4-hydroxylase activity","type":"related"},{"name":"cinnamic acid 4-monooxygenase activity","type":"related"},{"name":"cinnamic acid p-hydroxylase activity","type":"related"},{"name":"cytochrome P450 cinnamate 4-hydroxylase activity","type":"related"},{"name":"hydroxylase, cinnamate 4-","type":"related"},{"name":"oxygenase, cinnamate 4-mono-","type":"related"},{"name":"t-cinnamic acid hydroxylase activity","type":"related"},{"name":"trans-cinnamate 4-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 4-hydroxylase activity","type":"related"}],"termid":"GO:0016710"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: SO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified methionine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_methionine","secondary_identifiers":["MOD:00913"],"synonyms":[{"name":"ModMet","type":"exact"},{"name":"modified L methionine","type":"exact"},{"name":"modified L-methionine","type":"exact"}],"termid":"SO:0001395"}


id: GO:0014040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell differentiation","termid":"GO:0014038"},{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"positively_regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell differentiation","synonyms":[{"name":"activation of Schwann cell differentiation","type":"narrow"},{"name":"stimulation of Schwann cell differentiation","type":"narrow"},{"name":"up regulation of Schwann cell differentiation","type":"exact"},{"name":"up-regulation of Schwann cell differentiation","type":"exact"},{"name":"upregulation of Schwann cell differentiation","type":"exact"}],"termid":"GO:0014040"}


id: GO:0010521
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78822],"is_not":false,"summary":null,"term":"GO:0010521"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of telomerase.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0004857","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"telomerase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010521","terms_by_termid":{"GO:0010521":null}}


id: PBO:0029893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phleomycin","termid":"PBO:0029893"}


id: PBO:0089469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1","termid":"PBO:0089469"}


id: GO:0035252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a xylosyl group from UDP-xylose to an acceptor molecule.","definition_xrefs":["PMID:30127001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5617138","Reactome:R-HSA-9638090","Reactome:R-HSA-6785668"],"termid":"GO:0035252"}


id: PR:Q9UST3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 52 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03406","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.11","secondary_identifiers":["UniProtKB:Q9UST3"],"synonyms":[{"name":"Spom972h-VPS52","type":"exact"}],"termid":"PR:Q9UST3"}


id: PBO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 48","termid":"PBO:0075133"}


id: GO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate.","definition_xrefs":["EC:5.1.3.19","MetaCyc:CHONDROITIN-GLUCURONATE-5-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin-glucuronate 5-epimerase activity","secondary_identifiers":["Reactome:R-HSA-2022052","RHEA:21084"],"synonyms":[{"name":"chondroitin D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"chondroitin-D-glucuronate 5-epimerase activity","type":"related"},{"name":"dermatan-sulfate 5-epimerase activity","type":"related"},{"name":"polyglucuronate 5-epimerase activity","type":"related"},{"name":"urunosyl C-5 epimerase activity","type":"related"}],"termid":"GO:0047757"}


id: PBO:0048388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0048388"}


id: GO:1990678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of an acetyl group from lysine at position 16 of the histone.","definition_xrefs":["PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 deacetylation (obsolete GO:1990678)","termid":"GO:1990678"}


id: GO:0010605
data:
  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id: PBO:0090857
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proline transmembrane transporter Put4","termid":"PBO:0090857"}


id: MONDO:0002515
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hepatobiliary disorder","secondary_identifiers":["NCIT:C3959","EFO:0010284","DOID:3118","UMLS:C0267792","MEDGEN:82758"],"synonyms":[{"name":"disease of hepatobiliary system","type":"exact"},{"name":"disease or disorder of hepatobiliary system","type":"exact"},{"name":"disorder of hepatobiliary system","type":"exact"},{"name":"hepatobiliary disorder","type":"exact"},{"name":"hepatobiliary system disease","type":"exact"},{"name":"hepatobiliary system disease or disorder","type":"exact"},{"name":"liver and biliary disease","type":"exact"},{"name":"liver and biliary disorder","type":"exact"},{"name":"liver and biliary system disorder","type":"exact"},{"name":"liver and biliary tract disease","type":"exact"}],"termid":"MONDO:0002515","xrefs":{"Monarch":{"xref_id":"0002515"}}}


id: GO:1904148
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19260726","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.208","RHEA:23812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02548"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: GO:0086088
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization","termid":"GO:0086088"}


id: GO:0003780
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with two actin filaments to anchor them together.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cross-linking activity (obsolete GO:0003780)","synonyms":[{"name":"actin cross-linking activity","type":"exact"}],"termid":"GO:0003780"}


id: PBO:0090564
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein, serine/threonine repeat","termid":"PBO:0090564"}


id: GO:0032389
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  {"annotated_genes":["SJAG_01620","SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72402,73171],"is_not":false,"summary":null,"term":"GO:0032389"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MutLalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MLH1/PMS2 complex","type":"exact"},{"name":"MMR complex","type":"broad"},{"name":"MutL-alpha complex","type":"exact"}],"termid":"GO:0032389","terms_by_termid":{"GO:0032389":null}}


id: FYPO:0005242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on glutamine nitrogen source","synonyms":[{"name":"decreased growth on glutamine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamine nitrogen source","type":"narrow"},{"name":"reduced cell growth on glutamine nitrogen source","type":"exact"},{"name":"slow cell growth on glutamine nitrogen source","type":"narrow"}],"termid":"FYPO:0005242"}


id: GO:0044295
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell axon.","definition_xrefs":["NIF_Subcellular:sao203987954","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"axon growth cone","type":"exact"}],"termid":"GO:0044295"}


id: GO:0045024
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of bonds after acidic amino acids and after branched chain amino acids.","definition_xrefs":["PMID:11735414"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamyl peptide hydrolyzing enzyme activity (obsolete GO:0045024)","synonyms":[{"name":"peptidyl-glutamyl peptide hydrolyzing enzyme activity","type":"exact"}],"termid":"GO:0045024"}


id: PBO:0002188
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like (predicted)","termid":"PBO:0002188"}


id: GO:0099103
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: PBO:0064686
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 22","termid":"PBO:0064686"}


id: PBO:0031114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype_during_exponential_phase","termid":"PBO:0031114"}


id: PBO:0111530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 like (pseudogene)","termid":"PBO:0111530"}


id: MONDO:0017987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia is characterized by cerebrospinal fluid (CSF)-filled cavities (syrinx) inside the spinal cord, either as a result of a known cause (secondary syringomyelia, SS) or, more rarely, due to an unknown cause (primary syringomyelia, PS).","definition_xrefs":["Orphanet:3280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of medulla oblongata (obsolete MONDO:0015141)","termid":"MONDO:0015141"},{"relation_name":"is_a","term_name":"spinal cord disorder","termid":"MONDO:0002545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia","secondary_identifiers":["SCTID:111496009","UMLS:C0039144","DOID:327","NANDO:1200507","MEDGEN:21449","MedDRA:10042928","GARD:7725","NANDO:1200506","NORD:1755","NCIT:C85179","MESH:D013595"],"synonyms":[{"name":"hydromyelia","type":"related"}],"termid":"MONDO:0017987","xrefs":{"Monarch":{"xref_id":"0017987"}}}


id: MONDO:0014186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ARL2BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa with or without situs inversus","secondary_identifiers":["GARD:15965","MEDGEN:1658130","ICD10CM:H35.5","UMLS:C4747737","DOID:0110419","OMIM:615434"],"synonyms":[{"name":"ARL2BP retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ARL2BP","type":"exact"},{"name":"retinitis pigmentosa with or without situs inversus","type":"exact"}],"termid":"MONDO:0014186","xrefs":{"Monarch":{"xref_id":"0014186"}}}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: PBO:0083960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General splicing factor; required for stable U2 snRNP binding to primary transcripts; essential for the first step of splicing; component of the pre-catalytic spliceosome complex containing Cef1p; similar to S. pombe Cwf24p","termid":"PBO:0083960"}


id: PBO:0112993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with CDK and TFIIK subunit Kin28p, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0112993"}


id: PBO:0061892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, long wave sensitive","termid":"PBO:0061892"}


id: GO:0051247
data:
  {"annotated_genes":["SJAG_01210","SJAG_02812","SJAG_00712","SJAG_05265","SJAG_01131","SJAG_01544","SJAG_01489","SJAG_00766","SJAG_01047","SJAG_02723","SJAG_00642","SJAG_01517","SJAG_03048","SJAG_04477","SJAG_00071","SJAG_01249","SJAG_03699","SJAG_04990","SJAG_02189","SJAG_01436","SJAG_02043","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[116739,106207,71533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[98212,112263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[99978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[62199,68852,68345,69836,70350,66674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[101910,108462,116682,106210,111295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[98902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[70304,67825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[67826,70305,78308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"positively_regulates","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01047":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01489":null,"SJAG_01517":null,"SJAG_01544":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03048":null,"SJAG_03550":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032270"],"synonyms":[{"name":"activation of cellular protein metabolic process","type":"narrow"},{"name":"activation of protein metabolic process","type":"narrow"},{"name":"positive regulation of cellular protein metabolic process","type":"exact"},{"name":"positive regulation of cellular protein metabolism","type":"exact"},{"name":"positive regulation of protein metabolism","type":"exact"},{"name":"stimulation of cellular protein metabolic process","type":"narrow"},{"name":"stimulation of protein metabolic process","type":"narrow"},{"name":"up regulation of cellular protein metabolic process","type":"exact"},{"name":"up regulation of protein metabolic process","type":"exact"},{"name":"up-regulation of cellular protein metabolic process","type":"exact"},{"name":"up-regulation of protein metabolic process","type":"exact"},{"name":"upregulation of cellular protein metabolic process","type":"exact"},{"name":"upregulation of protein metabolic process","type":"exact"}],"termid":"GO:0051247","terms_by_termid":{"GO:0032436":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null,"GO:2000767":null}}


id: MONDO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete encephalopathy recurrent of childhood (obsolete MONDO:0023065)","termid":"MONDO:0023065","xrefs":{"Monarch":{"xref_id":"0023065"}}}


id: SO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide","synonyms":[{"name":"elongated polypeptide","type":"exact"}],"termid":"SO:0001609"}


id: GO:0004171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: [eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.46"],"gene_count":0,"genotype_count":0,"name":"obsolete deoxyhypusine synthase activity (obsolete GO:0004171)","synonyms":[{"name":"[eIF-5A]-deoxyhypusine synthase","type":"related"},{"name":"deoxyhypusine synthase activity","type":"exact"}],"termid":"GO:0004171"}


id: FYPO:0006042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is increased.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"increased rate of chromosome recapture during mitosis","type":"exact"},{"name":"increased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"increased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"increased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"increased rate of mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006042"}


id: PBO:0029345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_tRNA_level","termid":"PBO:0029345"}


id: GO:0061156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pulmonary artery are generated and organized. The pulmonary artery is the artery that carries blood from the heart to the lungs.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery morphogenesis","termid":"GO:0061156"}


id: GO:1903021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["PMID:12192046","GO_REF:0000059","GOC:rb","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands (obsolete GO:1903021)","termid":"GO:1903021"}


id: MONDO:0002872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gestational or non-gestational neoplasm composed of neoplastic trophoblastic cells. Representative examples include hydatidiform mole and choriocarcinoma.","definition_xrefs":["NCIT:C3422"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophoblastic neoplasm","secondary_identifiers":["MESH:D014328","DOID:4085","MEDGEN:21708","UMLS:C0041182"],"synonyms":[{"name":"neoplasm of trophoblast","type":"exact"},{"name":"trophoblast neoplasm","type":"exact"},{"name":"trophoblast neoplasm (disease)","type":"exact"},{"name":"trophoblast tumor","type":"exact"},{"name":"trophoblast tumour","type":"exact"},{"name":"trophoblastic neoplasm","type":"exact"},{"name":"trophoblastic neoplasm (morphologic abnormality)","type":"exact"},{"name":"trophoblastic neoplasm NOS (morphologic abnormality)","type":"exact"},{"name":"trophoblastic neoplasms","type":"exact"},{"name":"trophoblastic tumor","type":"exact"},{"name":"trophoblastic tumor (qualifier value)","type":"exact"},{"name":"trophoblastic tumour","type":"exact"},{"name":"trophoblastic tumour (qualifier value)","type":"exact"},{"name":"tumor of trophoblast","type":"exact"},{"name":"tumour of trophoblast","type":"exact"}],"termid":"MONDO:0002872","xrefs":{"Monarch":{"xref_id":"0002872"}}}


id: PBO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 2","termid":"PBO:0044305"}


id: PR:Q9P7L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like protein SPBC21C3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.07c","secondary_identifiers":["UniProtKB:Q9P7L6"],"synonyms":[{"name":"Spom972h-METTL8","type":"exact"}],"termid":"PR:Q9P7L6"}


